Mock Version: 1.4.21 Mock Version: 1.4.21 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'], chrootPath='/var/lib/mock/f33-build-276282-51650/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False sh: perl: command not found sh: python3-config: command not found sh: python3-config: command not found Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1590451200 Wrote: /builddir/build/SRPMS/libsedml-0.4.4-10.fc33.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'], chrootPath='/var/lib/mock/f33-build-276282-51650/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1590451200 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.3lfspQ + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libSEDML-0.4.4 + /usr/bin/gzip -dc /builddir/build/SOURCES/libSEDML-0.4.4.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd libSEDML-0.4.4 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/cat /builddir/build/SOURCES/libsedml-fix_install_libpaths.patch + /usr/bin/patch -p0 -s --fuzz=0 --no-backup-if-mismatch + /usr/bin/cat /builddir/build/SOURCES/libsedml-fix_string_format.patch + /usr/bin/patch -p0 -s --fuzz=0 --no-backup-if-mismatch + sed -e 's| lib/cmake | lib64/cmake |g' -i CMakeLists.txt + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBNUML.cmake + sed -e 's| /usr/lib/cmake | /usr/lib64/cmake |g' -i CMakeModules/FindLIBSBML.cmake + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.nZAZRS + umask 022 + cd /builddir/build/BUILD + cd libSEDML-0.4.4 + mkdir build + pushd build ~/build/BUILD/libSEDML-0.4.4/build ~/build/BUILD/libSEDML-0.4.4 + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread' + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX ++ pkg-config --cflags libxml-2.0 + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -Wno-dev -DWITH_PYTHON:BOOL=ON -DWITH_SWIG:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.9 -DPYTHON_LIBRARY:FILEPATH=/usr/lib64/libpython3.9.so -DWITH_JAVA:BOOL=ON -DWITH_SWIG:BOOL=ON -DWITH_PERL:BOOL=ON -DWITH_RUBY:BOOL=ON -DWITH_R:BOOL=ON -DR_INCLUDE_DIRS:PATH=/usr/include/R -DCSHARP_COMPILER:FILEPATH=/usr/bin/mcs -DWITH_CHECK:BOOL=ON -DWITH_EXAMPLES:BOOL=ON -DLIBSBML_LIBRARY:FILEPATH=/usr/lib64/libsbml.so -DLIBSBML_INCLUDE_DIR:PATH=/usr/include -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_INSTALL_LIBDIR:PATH=/usr/lib64 -DCMAKE_INSTALL_PREFIX:PATH=/usr -DLIBSEDML_SHARED_VERSION:BOOL=ON '-DEXTRA_LIBS:STRING=numl;sbml;xml2;bz2;z;m;dl' -DLIBSBML_STATIC:BOOL=OFF '-DCMAKE_CXX_FLAGS_RELEASE:STRING=-I/usr/include/libxml2 ' -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE -DCMAKE_COLOR_MAKEFILE:BOOL=ON -DCPACK_BINARY_TZ:BOOL=OFF -DCPACK_BINARY_TGZ:BOOL=OFF -DCPACK_SOURCE_TBZ2:BOOL=OFF -DCPACK_SOURCE_TGZ:BOOL=OFF -DCPACK_SOURCE_TZ:BOOL=OFF -DWITH_ZLIB:BOOL=ON -DWITH_CPP_NAMESPACE:BOOL=OFF -DCMAKE_SKIP_RPATH:BOOL=YES -DCMAKE_SKIP_INSTALL_RPATH:BOOL=YES .. -- The C compiler identification is GNU 10.1.1 -- The CXX compiler identification is GNU 10.1.1 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc - works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ - works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Warning (dev) at /usr/share/cmake/Modules/CMakeTestCompilerCommon.cmake:13 (message): Ignored CHECK_PASS without CHECK_START Call Stack (most recent call first): /usr/share/cmake/Modules/CMakeTestCCompiler.cmake:66 (PrintTestCompilerResult) CMakeLists.txt:44 (include) This warning is for project developers. Use -Wno-dev to suppress it. -- Detecting C compile features -- Detecting C compile features - done -- Looking for sbml-static -- Found LIBSBML: sbml-static -- Looking for numl-static -- Found LIBNUML: numl-static -- Looking for gzopen in /usr/lib64/libz.so -- Looking for gzopen in /usr/lib64/libz.so - found -- Looking for include file check.h -- Looking for include file check.h - found -- Looking for include file expat.h -- Looking for include file expat.h - not found -- Looking for include file errno.h -- Looking for include file errno.h - found -- Looking for include file math.h -- Looking for include file math.h - found -- Looking for include file sys/types.h -- Looking for include file sys/types.h - found -- Looking for include file float.h -- Looking for include file float.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Found SWIG: /usr/bin/swig (found version "4.0.0") -- Found JNI: /usr/lib/jvm/java/jre/lib/riscv64/libjawt.so -- Found Java: /usr/bin/java (found version "1.8.0.212") found components: Development -- Found PythonInterp: /usr/bin/python3 (found version "3.9") -- Found PythonLibs: /usr/lib64/libpython3.9.so (found version "3.9.0b1") -- Found Perl: /usr/bin/perl (found version "5.30.3") -- Found PerlLibs: /usr/lib64/libperl.so (found version "5.30.3") -- Found Ruby: /usr/bin/ruby (found version "2.7.1") -- ---------------------------------------------------------------------- libSEDML version 0.4.4 ---------------------------------------------------------------------- More information and the latest version are available online at https://github.com/fbergmann/libSEDML/ Please report problems using the issue tracker at https://github.com/fbergmann/libSEDML/issues To contact the developers directly, email fbergman@caltech.edu Configured on host 'unknown' host type = Linux host operating system = Linux 5.5.0-0.rc5.git0.1.1.riscv64.fc32.riscv64 host CPU architecture = riscv64 General build flags: CC = /usr/bin/gcc CXX = /usr/bin/g++ CPPFLAGS = -DLINUX -DPACKAGE_VERSION="0.4.4" -DPACKAGE_NAME="libsedml" CFLAGS = -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC CXXFLAGS = -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC LDFLAGS = -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread SBML library configuration: SBML library = /usr/lib64/libsbml.so SBML include = -I/usr/include NUML library configuration: NUML library = /lib64/libnuml.so NUML include = -I/usr/include Other libSEDML configuration settings: Installation $prefix = /usr -- Value of $LD_LIBRARY_PATH = -- Using SWIG = /usr/bin/swig -- Using Java = /usr/bin/java -- Using Python = /usr/bin/python3 -- Using Perl = /usr/bin/perl -- Using Ruby = /usr/bin/ruby -- Using libcheck = /usr/lib64/libcheck.so -- -- Using C++ namespace for libSEDML (libsedml) = no -- ---------------------------------------------------------------------- -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_SKIP_INSTALL_RPATH CSHARP_COMPILER INCLUDE_INSTALL_DIR LIBSBML_STATIC LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/libSEDML-0.4.4/build + make -j1 /usr/bin/cmake -S/builddir/build/BUILD/libSEDML-0.4.4 -B/builddir/build/BUILD/libSEDML-0.4.4/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/libSEDML-0.4.4/build/CMakeFiles /builddir/build/BUILD/libSEDML-0.4.4/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/sedml /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/sedml /builddir/build/BUILD/libSEDML-0.4.4/build/sedml/CMakeFiles/sedml-static.dir/DependInfo.cmake --color= Scanning dependencies of target sedml-static make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f sedml/CMakeFiles/sedml-static.dir/build.make sedml/CMakeFiles/sedml-static.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 0%] Building CXX object sedml/CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/common/libsedml-version.cpp [ 1%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAddXML.cpp [ 2%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAlgorithm.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAlgorithmParameter.cpp [ 3%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] 1985 | bool sedmlDeclared = false; | ^~~~~~~~~~~~~ [ 4%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChange.cpp [ 5%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChangeAttribute.cpp [ 6%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChangeXML.cpp [ 6%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedComputeChange.cpp [ 7%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedConstructorException.cpp [ 8%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedCurve.cpp [ 9%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataDescription.cpp [ 9%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataGenerator.cpp [ 10%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataSet.cpp [ 11%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataSource.cpp [ 12%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] 1330 | bool assigned = false; | ^~~~~~~~ [ 12%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedError.cpp [ 13%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedErrorLog.cpp [ 14%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedFunctionalRange.cpp [ 14%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedListOf.cpp [ 15%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedModel.cpp [ 16%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedNamespaces.cpp [ 17%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedOneStep.cpp [ 17%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedOutput.cpp [ 18%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedParameter.cpp [ 19%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] 514 | bool assigned = false; | ^~~~~~~~ [ 20%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot3D.cpp [ 20%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRange.cpp [ 21%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedReader.cpp [ 22%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRemoveXML.cpp [ 23%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRepeatedTask.cpp [ 23%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedReport.cpp [ 24%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSetValue.cpp [ 25%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSimulation.cpp [ 25%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] 262 | const string& name = stream.peek().getName(); | ^~~~ [ 26%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSteadyState.cpp [ 27%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSubTask.cpp [ 28%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSurface.cpp [ 28%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] 376 | const string& name = stream.peek().getName(); | ^~~~ [ 29%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTypeCodes.cpp [ 30%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedUniformRange.cpp [ 31%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedUniformTimeCourse.cpp [ 31%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVariable.cpp [ 32%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVectorRange.cpp [ 33%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVisitor.cpp [ 34%] Building CXX object sedml/CMakeFiles/sedml-static.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -o CMakeFiles/sedml-static.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedWriter.cpp [ 34%] Linking CXX static library libsedml-static.a cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/cmake -P CMakeFiles/sedml-static.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml-static.dir/link.txt --verbose=1 /usr/bin/ar qc libsedml-static.a CMakeFiles/sedml-static.dir/common/libsedml-version.cpp.o CMakeFiles/sedml-static.dir/SedAddXML.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithm.cpp.o CMakeFiles/sedml-static.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml-static.dir/SedBase.cpp.o CMakeFiles/sedml-static.dir/SedChange.cpp.o CMakeFiles/sedml-static.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml-static.dir/SedChangeXML.cpp.o CMakeFiles/sedml-static.dir/SedComputeChange.cpp.o CMakeFiles/sedml-static.dir/SedConstructorException.cpp.o CMakeFiles/sedml-static.dir/SedCurve.cpp.o CMakeFiles/sedml-static.dir/SedDataDescription.cpp.o CMakeFiles/sedml-static.dir/SedDataGenerator.cpp.o CMakeFiles/sedml-static.dir/SedDataSet.cpp.o CMakeFiles/sedml-static.dir/SedDataSource.cpp.o CMakeFiles/sedml-static.dir/SedDocument.cpp.o CMakeFiles/sedml-static.dir/SedError.cpp.o CMakeFiles/sedml-static.dir/SedErrorLog.cpp.o CMakeFiles/sedml-static.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml-static.dir/SedListOf.cpp.o CMakeFiles/sedml-static.dir/SedModel.cpp.o CMakeFiles/sedml-static.dir/SedNamespaces.cpp.o CMakeFiles/sedml-static.dir/SedOneStep.cpp.o CMakeFiles/sedml-static.dir/SedOutput.cpp.o CMakeFiles/sedml-static.dir/SedParameter.cpp.o CMakeFiles/sedml-static.dir/SedPlot2D.cpp.o CMakeFiles/sedml-static.dir/SedPlot3D.cpp.o CMakeFiles/sedml-static.dir/SedRange.cpp.o CMakeFiles/sedml-static.dir/SedReader.cpp.o CMakeFiles/sedml-static.dir/SedRemoveXML.cpp.o CMakeFiles/sedml-static.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml-static.dir/SedReport.cpp.o CMakeFiles/sedml-static.dir/SedSetValue.cpp.o CMakeFiles/sedml-static.dir/SedSimulation.cpp.o CMakeFiles/sedml-static.dir/SedSlice.cpp.o CMakeFiles/sedml-static.dir/SedSteadyState.cpp.o CMakeFiles/sedml-static.dir/SedSubTask.cpp.o CMakeFiles/sedml-static.dir/SedSurface.cpp.o CMakeFiles/sedml-static.dir/SedTask.cpp.o CMakeFiles/sedml-static.dir/SedTypeCodes.cpp.o CMakeFiles/sedml-static.dir/SedUniformRange.cpp.o CMakeFiles/sedml-static.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml-static.dir/SedVariable.cpp.o CMakeFiles/sedml-static.dir/SedVectorRange.cpp.o CMakeFiles/sedml-static.dir/SedVisitor.cpp.o CMakeFiles/sedml-static.dir/SedWriter.cpp.o /usr/bin/ranlib libsedml-static.a make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 34%] Built target sedml-static make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/sedml /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/sedml /builddir/build/BUILD/libSEDML-0.4.4/build/sedml/CMakeFiles/sedml.dir/DependInfo.cmake --color= Scanning dependencies of target sedml make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f sedml/CMakeFiles/sedml.dir/build.make sedml/CMakeFiles/sedml.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 35%] Building CXX object sedml/CMakeFiles/sedml.dir/common/libsedml-version.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/common/libsedml-version.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/common/libsedml-version.cpp [ 36%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAddXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAddXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAddXML.cpp [ 36%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithm.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAlgorithm.cpp [ 37%] Building CXX object sedml/CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedAlgorithmParameter.cpp [ 38%] Building CXX object sedml/CMakeFiles/sedml.dir/SedBase.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedBase.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp: In member function 'bool SedBase::hasValidLevelVersionNamespaceCombination(int, XMLNamespaces*)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedBase.cpp:1985:8: warning: variable 'sedmlDeclared' set but not used [-Wunused-but-set-variable] 1985 | bool sedmlDeclared = false; | ^~~~~~~~~~~~~ [ 39%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChange.cpp [ 39%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChangeAttribute.cpp [ 40%] Building CXX object sedml/CMakeFiles/sedml.dir/SedChangeXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedChangeXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedChangeXML.cpp [ 41%] Building CXX object sedml/CMakeFiles/sedml.dir/SedComputeChange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedComputeChange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedComputeChange.cpp [ 42%] Building CXX object sedml/CMakeFiles/sedml.dir/SedConstructorException.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedConstructorException.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedConstructorException.cpp [ 42%] Building CXX object sedml/CMakeFiles/sedml.dir/SedCurve.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedCurve.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedCurve.cpp [ 43%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataDescription.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataDescription.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataDescription.cpp [ 44%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataGenerator.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataGenerator.cpp [ 44%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSet.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSet.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataSet.cpp [ 45%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDataSource.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDataSource.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDataSource.cpp [ 46%] Building CXX object sedml/CMakeFiles/sedml.dir/SedDocument.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedDocument.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp: In member function 'virtual void SedDocument::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedDocument.cpp:1330:8: warning: unused variable 'assigned' [-Wunused-variable] 1330 | bool assigned = false; | ^~~~~~~~ [ 47%] Building CXX object sedml/CMakeFiles/sedml.dir/SedError.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedError.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedError.cpp [ 47%] Building CXX object sedml/CMakeFiles/sedml.dir/SedErrorLog.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedErrorLog.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedErrorLog.cpp [ 48%] Building CXX object sedml/CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedFunctionalRange.cpp [ 49%] Building CXX object sedml/CMakeFiles/sedml.dir/SedListOf.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedListOf.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedListOf.cpp [ 50%] Building CXX object sedml/CMakeFiles/sedml.dir/SedModel.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedModel.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedModel.cpp [ 50%] Building CXX object sedml/CMakeFiles/sedml.dir/SedNamespaces.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedNamespaces.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedNamespaces.cpp [ 51%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOneStep.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOneStep.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedOneStep.cpp [ 52%] Building CXX object sedml/CMakeFiles/sedml.dir/SedOutput.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedOutput.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedOutput.cpp [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedParameter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedParameter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedParameter.cpp [ 53%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot2D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot2D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp: In member function 'virtual void SedPlot2D::readAttributes(const XMLAttributes&, const ExpectedAttributes&)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot2D.cpp:514:8: warning: unused variable 'assigned' [-Wunused-variable] 514 | bool assigned = false; | ^~~~~~~~ [ 54%] Building CXX object sedml/CMakeFiles/sedml.dir/SedPlot3D.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedPlot3D.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedPlot3D.cpp [ 55%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRange.cpp [ 56%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReader.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReader.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedReader.cpp [ 56%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRemoveXML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRemoveXML.cpp [ 57%] Building CXX object sedml/CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedRepeatedTask.cpp [ 58%] Building CXX object sedml/CMakeFiles/sedml.dir/SedReport.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedReport.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedReport.cpp [ 58%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSetValue.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSetValue.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSetValue.cpp [ 59%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSimulation.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSimulation.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSimulation.cpp [ 60%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSlice.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSlice.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp: In member function 'virtual SedBase* SedSlice::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSlice.cpp:262:17: warning: unused variable 'name' [-Wunused-variable] 262 | const string& name = stream.peek().getName(); | ^~~~ [ 61%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSteadyState.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSteadyState.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSteadyState.cpp [ 61%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSubTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSubTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSubTask.cpp [ 62%] Building CXX object sedml/CMakeFiles/sedml.dir/SedSurface.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedSurface.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedSurface.cpp [ 63%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTask.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTask.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp: In member function 'virtual SedBase* SedTask::createObject(XMLInputStream&)': /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTask.cpp:376:17: warning: unused variable 'name' [-Wunused-variable] 376 | const string& name = stream.peek().getName(); | ^~~~ [ 64%] Building CXX object sedml/CMakeFiles/sedml.dir/SedTypeCodes.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedTypeCodes.cpp [ 64%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedUniformRange.cpp [ 65%] Building CXX object sedml/CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedUniformTimeCourse.cpp [ 66%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVariable.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVariable.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVariable.cpp [ 67%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVectorRange.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVectorRange.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVectorRange.cpp [ 67%] Building CXX object sedml/CMakeFiles/sedml.dir/SedVisitor.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedVisitor.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedVisitor.cpp [ 68%] Building CXX object sedml/CMakeFiles/sedml.dir/SedWriter.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/g++ -DLIBSEDML_EXPORTS=1 -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dsedml_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml/.. -I/builddir/build/BUILD/libSEDML-0.4.4/sedml -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/sedml.dir/SedWriter.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/sedml/SedWriter.cpp [ 69%] Linking CXX shared library libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/cmake -E cmake_link_script CMakeFiles/sedml.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -Wl,-soname,libsedml.so.0 -o libsedml.so.0.4.4 CMakeFiles/sedml.dir/common/libsedml-version.cpp.o CMakeFiles/sedml.dir/SedAddXML.cpp.o CMakeFiles/sedml.dir/SedAlgorithm.cpp.o CMakeFiles/sedml.dir/SedAlgorithmParameter.cpp.o CMakeFiles/sedml.dir/SedBase.cpp.o CMakeFiles/sedml.dir/SedChange.cpp.o CMakeFiles/sedml.dir/SedChangeAttribute.cpp.o CMakeFiles/sedml.dir/SedChangeXML.cpp.o CMakeFiles/sedml.dir/SedComputeChange.cpp.o CMakeFiles/sedml.dir/SedConstructorException.cpp.o CMakeFiles/sedml.dir/SedCurve.cpp.o CMakeFiles/sedml.dir/SedDataDescription.cpp.o CMakeFiles/sedml.dir/SedDataGenerator.cpp.o CMakeFiles/sedml.dir/SedDataSet.cpp.o CMakeFiles/sedml.dir/SedDataSource.cpp.o CMakeFiles/sedml.dir/SedDocument.cpp.o CMakeFiles/sedml.dir/SedError.cpp.o CMakeFiles/sedml.dir/SedErrorLog.cpp.o CMakeFiles/sedml.dir/SedFunctionalRange.cpp.o CMakeFiles/sedml.dir/SedListOf.cpp.o CMakeFiles/sedml.dir/SedModel.cpp.o CMakeFiles/sedml.dir/SedNamespaces.cpp.o CMakeFiles/sedml.dir/SedOneStep.cpp.o CMakeFiles/sedml.dir/SedOutput.cpp.o CMakeFiles/sedml.dir/SedParameter.cpp.o CMakeFiles/sedml.dir/SedPlot2D.cpp.o CMakeFiles/sedml.dir/SedPlot3D.cpp.o CMakeFiles/sedml.dir/SedRange.cpp.o CMakeFiles/sedml.dir/SedReader.cpp.o CMakeFiles/sedml.dir/SedRemoveXML.cpp.o CMakeFiles/sedml.dir/SedRepeatedTask.cpp.o CMakeFiles/sedml.dir/SedReport.cpp.o CMakeFiles/sedml.dir/SedSetValue.cpp.o CMakeFiles/sedml.dir/SedSimulation.cpp.o CMakeFiles/sedml.dir/SedSlice.cpp.o CMakeFiles/sedml.dir/SedSteadyState.cpp.o CMakeFiles/sedml.dir/SedSubTask.cpp.o CMakeFiles/sedml.dir/SedSurface.cpp.o CMakeFiles/sedml.dir/SedTask.cpp.o CMakeFiles/sedml.dir/SedTypeCodes.cpp.o CMakeFiles/sedml.dir/SedUniformRange.cpp.o CMakeFiles/sedml.dir/SedUniformTimeCourse.cpp.o CMakeFiles/sedml.dir/SedVariable.cpp.o CMakeFiles/sedml.dir/SedVectorRange.cpp.o CMakeFiles/sedml.dir/SedVisitor.cpp.o CMakeFiles/sedml.dir/SedWriter.cpp.o /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl cd /builddir/build/BUILD/libSEDML-0.4.4/build/sedml && /usr/bin/cmake -E cmake_symlink_library libsedml.so.0.4.4 libsedml.so.0 libsedml.so make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 69%] Built target sedml make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/CMakeFiles/binding_java_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/java/CMakeFiles/binding_java_swig.dir/build.make bindings/java/CMakeFiles/binding_java_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 70%] Swig Java source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/java-files/org/sedml/libsedml cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java -I/usr/include/ -I/usr/include/ -c++ -java -package org.sedml.libsedml -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -outdir /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/java-files/org/sedml/libsedml -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../swig/libsedml.i /builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:72: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 70%] Built target binding_java_swig make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/CMakeFiles/binding_java_jar.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_jar make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/java/CMakeFiles/binding_java_jar.dir/build.make bindings/java/CMakeFiles/binding_java_jar.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 70%] Building: libsedml.jar cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/cmake -E make_directory /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/test cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/cmake -DJava_JAVAC_EXECUTABLE="/usr/bin/javac" -DJava_JAR_EXECUTABLE="/usr/bin/jar" -DBIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java" -DSRC_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.4/bindings/java" -DFILE_SEP=":" -DPATH_SEP=/ -P /builddir/build/BUILD/libSEDML-0.4.4/bindings/java/compile-native-files.cmake Creating: libsedml.jar warning: [options] bootstrap class path not set in conjunction with -source 1.5 warning: [options] source value 1.5 is obsolete and will be removed in a future release warning: [options] target value 1.5 is obsolete and will be removed in a future release warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. 4 warnings added manifest adding: org/sedml/libsedml/ASTNode.class(in = 16641) (out= 4810)(deflated 71%) adding: org/sedml/libsedml/ASTNodeList.class(in = 1542) (out= 712)(deflated 53%) adding: org/sedml/libsedml/AtomicDescription.class(in = 2776) (out= 1080)(deflated 61%) adding: org/sedml/libsedml/AtomicValue.class(in = 2512) (out= 1048)(deflated 58%) adding: org/sedml/libsedml/CVTerm.class(in = 4674) (out= 1649)(deflated 64%) adding: org/sedml/libsedml/CVTermList.class(in = 1524) (out= 713)(deflated 53%) adding: org/sedml/libsedml/CompositeDescription.class(in = 4937) (out= 1537)(deflated 68%) adding: org/sedml/libsedml/CompositeValue.class(in = 5054) (out= 1642)(deflated 67%) adding: org/sedml/libsedml/Date.class(in = 4765) (out= 1781)(deflated 62%) adding: org/sedml/libsedml/DateList.class(in = 1488) (out= 709)(deflated 52%) adding: org/sedml/libsedml/Dimension.class(in = 3157) (out= 1208)(deflated 61%) adding: org/sedml/libsedml/DimensionDescription.class(in = 3942) (out= 1334)(deflated 66%) adding: org/sedml/libsedml/DoubleStdVector.class(in = 4379) (out= 1756)(deflated 59%) adding: org/sedml/libsedml/L3ParserSettings.class(in = 5900) (out= 1814)(deflated 69%) adding: org/sedml/libsedml/Model.class(in = 37837) (out= 9568)(deflated 74%) adding: org/sedml/libsedml/ModelCreatorList.class(in = 1641) (out= 726)(deflated 55%) adding: org/sedml/libsedml/NMBase.class(in = 8128) (out= 2446)(deflated 69%) adding: org/sedml/libsedml/NUMLConstructorException.class(in = 907) (out= 533)(deflated 41%) adding: org/sedml/libsedml/NUMLDocument.class(in = 5377) (out= 1844)(deflated 65%) adding: org/sedml/libsedml/NUMLError.class(in = 2275) (out= 974)(deflated 57%) adding: org/sedml/libsedml/NUMLErrorLog.class(in = 3518) (out= 1259)(deflated 64%) adding: org/sedml/libsedml/NUMLList.class(in = 3371) (out= 1277)(deflated 62%) adding: org/sedml/libsedml/NUMLNamespaces.class(in = 2601) (out= 1039)(deflated 60%) adding: org/sedml/libsedml/NUMLReader.class(in = 1654) (out= 800)(deflated 51%) adding: org/sedml/libsedml/NUMLWriter.class(in = 2479) (out= 1000)(deflated 59%) adding: org/sedml/libsedml/OFStream.class(in = 1712) (out= 794)(deflated 53%) adding: org/sedml/libsedml/ONTOLOGY.class(in = 1578) (out= 742)(deflated 52%) adding: org/sedml/libsedml/OStream.class(in = 1404) (out= 751)(deflated 46%) adding: org/sedml/libsedml/OStringStream.class(in = 1247) (out= 646)(deflated 48%) adding: org/sedml/libsedml/OntologyTerm.class(in = 3203) (out= 1184)(deflated 63%) adding: org/sedml/libsedml/OntologyTerms.class(in = 2231) (out= 943)(deflated 57%) adding: org/sedml/libsedml/ResultComponent.class(in = 5580) (out= 1750)(deflated 68%) adding: org/sedml/libsedml/ResultComponents.class(in = 2478) (out= 986)(deflated 60%) adding: org/sedml/libsedml/SBMLNamespaces.class(in = 5735) (out= 1809)(deflated 68%) adding: org/sedml/libsedml/SBase.class(in = 20837) (out= 5678)(deflated 72%) adding: org/sedml/libsedml/SBaseList.class(in = 1506) (out= 711)(deflated 52%) adding: org/sedml/libsedml/SWIGTYPE_p_ASTBasePlugin.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ASTNodeType_t.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_AlgebraicRule.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_AssignmentRule.class(in = 466) (out= 300)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Compartment.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_CompartmentType.class(in = 469) (out= 302)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Constraint.class(in = 454) (out= 297)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Delay.class(in = 439) (out= 293)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_ElementFilter.class(in = 463) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Event.class(in = 439) (out= 291)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_EventAssignment.class(in = 469) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ExtendedMathType_t.class(in = 478) (out= 306)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_FormulaUnitsData.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_FunctionDefinition.class(in = 478) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_IdList.class(in = 442) (out= 293)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_IdentifierTransformer.class(in = 487) (out= 305)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_InitialAssignment.class(in = 475) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_KineticLaw.class(in = 454) (out= 296)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_L3ParserSettings_t.class(in = 478) (out= 304)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_List.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfCompartmentTypes.class(in = 490) (out= 309)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfCompartments.class(in = 478) (out= 304)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfConstraints.class(in = 475) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfEvents.class(in = 460) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfFunctionDefinitions.class(in = 499) (out= 308)(deflated 38%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfInitialAssignments.class(in = 496) (out= 308)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfParameters.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfReactions.class(in = 469) (out= 302)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfRules.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfSpecies.class(in = 463) (out= 301)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfSpeciesTypes.class(in = 478) (out= 305)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_ListOfUnitDefinitions.class(in = 487) (out= 305)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_LocalParameter.class(in = 466) (out= 300)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ModelCreator.class(in = 460) (out= 297)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_ModelHistory.class(in = 460) (out= 299)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Model_t.class(in = 445) (out= 292)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_ModifierSpeciesReference.class(in = 496) (out= 309)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_NUMLDocument_t.class(in = 466) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Parameter.class(in = 451) (out= 296)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_RateRule.class(in = 448) (out= 296)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_Reaction.class(in = 448) (out= 295)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Rule.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_SBMLDocument.class(in = 460) (out= 300)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_SBMLNamespaces_t.class(in = 472) (out= 303)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_SBasePlugin.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Species.class(in = 445) (out= 293)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_SpeciesReference.class(in = 472) (out= 302)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_SpeciesType.class(in = 457) (out= 299)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_StringBuffer_t.class(in = 466) (out= 301)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_Trigger.class(in = 445) (out= 292)(deflated 34%) adding: org/sedml/libsedml/SWIGTYPE_p_Unit.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SWIGTYPE_p_UnitDefinition.class(in = 466) (out= 298)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_XMLNamespaces_t.class(in = 469) (out= 303)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_std__listT_NUMLError_t.class(in = 490) (out= 309)(deflated 36%) adding: org/sedml/libsedml/SWIGTYPE_p_std__listT_SedError_t.class(in = 487) (out= 306)(deflated 37%) adding: org/sedml/libsedml/SWIGTYPE_p_std__ostream.class(in = 460) (out= 298)(deflated 35%) adding: org/sedml/libsedml/SWIGTYPE_p_void.class(in = 436) (out= 290)(deflated 33%) adding: org/sedml/libsedml/SedAddXML.class(in = 3052) (out= 1180)(deflated 61%) adding: org/sedml/libsedml/SedAlgorithm.class(in = 5218) (out= 1679)(deflated 67%) adding: org/sedml/libsedml/SedAlgorithmParameter.class(in = 3901) (out= 1323)(deflated 66%) adding: org/sedml/libsedml/SedBase.class(in = 11106) (out= 3183)(deflated 71%) adding: org/sedml/libsedml/SedBaseList.class(in = 1542) (out= 713)(deflated 53%) adding: org/sedml/libsedml/SedChange.class(in = 2976) (out= 1161)(deflated 60%) adding: org/sedml/libsedml/SedChangeAttribute.class(in = 3139) (out= 1143)(deflated 63%) adding: org/sedml/libsedml/SedChangeXML.class(in = 3130) (out= 1183)(deflated 62%) adding: org/sedml/libsedml/SedComputeChange.class(in = 6494) (out= 1979)(deflated 69%) adding: org/sedml/libsedml/SedConstructorException.class(in = 1814) (out= 799)(deflated 55%) adding: org/sedml/libsedml/SedCurve.class(in = 6857) (out= 2133)(deflated 68%) adding: org/sedml/libsedml/SedDataDescription.class(in = 7186) (out= 2095)(deflated 70%) adding: org/sedml/libsedml/SedDataGenerator.class(in = 7332) (out= 2183)(deflated 70%) adding: org/sedml/libsedml/SedDataSet.class(in = 4044) (out= 1427)(deflated 64%) adding: org/sedml/libsedml/SedDataSource.class(in = 5443) (out= 1774)(deflated 67%) adding: org/sedml/libsedml/SedDocument.class(in = 13881) (out= 3844)(deflated 72%) adding: org/sedml/libsedml/SedError.class(in = 2506) (out= 984)(deflated 60%) adding: org/sedml/libsedml/SedErrorLog.class(in = 6205) (out= 1821)(deflated 70%) adding: org/sedml/libsedml/SedErrorStdVector.class(in = 4663) (out= 1747)(deflated 62%) adding: org/sedml/libsedml/SedFunctionalRange.class(in = 7080) (out= 2102)(deflated 70%) adding: org/sedml/libsedml/SedListOf.class(in = 4476) (out= 1571)(deflated 64%) adding: org/sedml/libsedml/SedListOfAlgorithmParameters.class(in = 3747) (out= 1231)(deflated 67%) adding: org/sedml/libsedml/SedListOfChanges.class(in = 4289) (out= 1499)(deflated 65%) adding: org/sedml/libsedml/SedListOfCurves.class(in = 3253) (out= 1202)(deflated 63%) adding: org/sedml/libsedml/SedListOfDataDescriptions.class(in = 3633) (out= 1222)(deflated 66%) adding: org/sedml/libsedml/SedListOfDataGenerators.class(in = 3557) (out= 1218)(deflated 65%) adding: org/sedml/libsedml/SedListOfDataSets.class(in = 3329) (out= 1208)(deflated 63%) adding: org/sedml/libsedml/SedListOfDataSources.class(in = 3443) (out= 1210)(deflated 64%) adding: org/sedml/libsedml/SedListOfFunctionalRanges.class(in = 3633) (out= 1219)(deflated 66%) adding: org/sedml/libsedml/SedListOfModels.class(in = 3253) (out= 1202)(deflated 63%) adding: org/sedml/libsedml/SedListOfOutputs.class(in = 3797) (out= 1373)(deflated 63%) adding: org/sedml/libsedml/SedListOfParameters.class(in = 3405) (out= 1210)(deflated 64%) adding: org/sedml/libsedml/SedListOfRanges.class(in = 3824) (out= 1375)(deflated 64%) adding: org/sedml/libsedml/SedListOfSimulations.class(in = 3997) (out= 1391)(deflated 65%) adding: org/sedml/libsedml/SedListOfSlices.class(in = 3253) (out= 1202)(deflated 63%) adding: org/sedml/libsedml/SedListOfSubTasks.class(in = 3329) (out= 1207)(deflated 63%) adding: org/sedml/libsedml/SedListOfSurfaces.class(in = 3329) (out= 1206)(deflated 63%) adding: org/sedml/libsedml/SedListOfTaskChanges.class(in = 3419) (out= 1211)(deflated 64%) adding: org/sedml/libsedml/SedListOfTasks.class(in = 3475) (out= 1290)(deflated 62%) adding: org/sedml/libsedml/SedListOfVariables.class(in = 3367) (out= 1201)(deflated 64%) adding: org/sedml/libsedml/SedModel.class(in = 6561) (out= 2165)(deflated 67%) adding: org/sedml/libsedml/SedNamespaces.class(in = 3807) (out= 1367)(deflated 64%) adding: org/sedml/libsedml/SedNamespacesList.class(in = 1650) (out= 720)(deflated 56%) adding: org/sedml/libsedml/SedOneStep.class(in = 2913) (out= 1157)(deflated 60%) adding: org/sedml/libsedml/SedOutput.class(in = 3554) (out= 1330)(deflated 62%) adding: org/sedml/libsedml/SedParameter.class(in = 3773) (out= 1365)(deflated 63%) adding: org/sedml/libsedml/SedPlot2D.class(in = 4846) (out= 1673)(deflated 65%) adding: org/sedml/libsedml/SedPlot3D.class(in = 4133) (out= 1472)(deflated 64%) adding: org/sedml/libsedml/SedRange.class(in = 2914) (out= 1155)(deflated 60%) adding: org/sedml/libsedml/SedReader.class(in = 1647) (out= 794)(deflated 51%) adding: org/sedml/libsedml/SedRemoveXML.class(in = 2500) (out= 1034)(deflated 58%) adding: org/sedml/libsedml/SedRepeatedTask.class(in = 8699) (out= 2551)(deflated 70%) adding: org/sedml/libsedml/SedReport.class(in = 4133) (out= 1472)(deflated 64%) adding: org/sedml/libsedml/SedSetValue.class(in = 7908) (out= 2373)(deflated 69%) adding: org/sedml/libsedml/SedSimulation.class(in = 4505) (out= 1551)(deflated 65%) adding: org/sedml/libsedml/SedSlice.class(in = 3496) (out= 1312)(deflated 62%) adding: org/sedml/libsedml/SedSteadyState.class(in = 2546) (out= 1037)(deflated 59%) adding: org/sedml/libsedml/SedSubTask.class(in = 3312) (out= 1249)(deflated 62%) adding: org/sedml/libsedml/SedSurface.class(in = 3385) (out= 1269)(deflated 62%) adding: org/sedml/libsedml/SedTask.class(in = 4382) (out= 1524)(deflated 65%) adding: org/sedml/libsedml/SedUniformRange.class(in = 4402) (out= 1489)(deflated 66%) adding: org/sedml/libsedml/SedUniformTimeCourse.class(in = 4738) (out= 1505)(deflated 68%) adding: org/sedml/libsedml/SedVariable.class(in = 4916) (out= 1602)(deflated 67%) adding: org/sedml/libsedml/SedVectorRange.class(in = 3456) (out= 1282)(deflated 62%) adding: org/sedml/libsedml/SedWriter.class(in = 2686) (out= 1052)(deflated 60%) adding: org/sedml/libsedml/Tuple.class(in = 3012) (out= 1200)(deflated 60%) adding: org/sedml/libsedml/TupleDescription.class(in = 3597) (out= 1292)(deflated 64%) adding: org/sedml/libsedml/XMLAttributes.class(in = 6722) (out= 1884)(deflated 71%) adding: org/sedml/libsedml/XMLConstructorException.class(in = 1109) (out= 615)(deflated 44%) adding: org/sedml/libsedml/XMLError.class(in = 4368) (out= 1613)(deflated 63%) adding: org/sedml/libsedml/XMLErrorLog.class(in = 4236) (out= 1505)(deflated 64%) adding: org/sedml/libsedml/XMLInputStream.class(in = 4641) (out= 1516)(deflated 67%) adding: org/sedml/libsedml/XMLNamespaces.class(in = 4087) (out= 1399)(deflated 65%) adding: org/sedml/libsedml/XMLNode.class(in = 8076) (out= 2346)(deflated 70%) adding: org/sedml/libsedml/XMLOutputStream.class(in = 9090) (out= 2468)(deflated 72%) adding: org/sedml/libsedml/XMLOwningOutputFileStream.class(in = 1951) (out= 758)(deflated 61%) adding: org/sedml/libsedml/XMLOwningOutputStringStream.class(in = 1659) (out= 707)(deflated 57%) adding: org/sedml/libsedml/XMLToken.class(in = 12891) (out= 3303)(deflated 74%) adding: org/sedml/libsedml/XMLTriple.class(in = 2398) (out= 1032)(deflated 56%) adding: org/sedml/libsedml/XmlErrorStdVector.class(in = 4711) (out= 1786)(deflated 62%) adding: org/sedml/libsedml/libsedml.class(in = 11526) (out= 3901)(deflated 66%) adding: org/sedml/libsedml/libsedmlConstants.class(in = 35770) (out= 11370)(deflated 68%) adding: org/sedml/libsedml/libsedmlJNI.class(in = 165571) (out= 33188)(deflated 79%) make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 71%] Built target binding_java_jar make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/CMakeFiles/binding_java_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_java_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/java/CMakeFiles/binding_java_lib.dir/build.make bindings/java/CMakeFiles/binding_java_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 71%] Building CXX object bindings/java/CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/g++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_java_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/java/../swig -I/usr/lib/jvm/java/include -I/usr/lib/jvm/java/include/linux -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java/libsedml_wrap.cpp [ 72%] Linking CXX shared library libsedmlj.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/java && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_java_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -Wl,-soname,libsedmlj.so -o libsedmlj.so CMakeFiles/binding_java_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 73%] Built target binding_java_lib make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/CMakeFiles/binding_python_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/python/CMakeFiles/binding_python_swig.dir/build.make bindings/python/CMakeFiles/binding_python_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 74%] Swig Python source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python -I/usr/include/ -I/usr/include/ -c++ -python -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/libsedml.i /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/local.i:156: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python && /usr/bin/cmake -DCUR_BIN_DIRECTORY="/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python" -DVERSION="0.4.4" -P /builddir/build/BUILD/libSEDML-0.4.4/bindings/python/add_version.cmake Python: Add Version to generated file make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 74%] Built target binding_python_swig make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/CMakeFiles/binding_python_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_python_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/python/CMakeFiles/binding_python_lib.dir/build.make bindings/python/CMakeFiles/binding_python_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 74%] Building CXX object bindings/python/CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python && /usr/bin/g++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_python_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/python/../swig -I/usr/include/python3.9 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python/libsedml_wrap.cpp [ 75%] Linking CXX shared library _libsedml.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_python_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -Wl,-soname,_libsedml.so -o _libsedml.so CMakeFiles/binding_python_lib.dir/libsedml_wrap.cpp.o ../../sedml/libsedml-static.a -lpython3.9 /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 76%] Built target binding_python_lib make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/CMakeFiles/binding_perl_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_perl_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/perl/CMakeFiles/binding_perl_swig.dir/build.make bindings/perl/CMakeFiles/binding_perl_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 77%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/libsedml.i /usr/include/sbml/xml/XMLInputStream.h:236: Warning 314: 'next' is a perl keyword /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:72: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/SBase.h:811: Warning 509: Overloaded method SBase::getAncestorOfType(int,std::string const &) effectively ignored, /usr/include/sbml/SBase.h:859: Warning 509: as it is shadowed by SBase::getAncestorOfType(int,std::string const) const. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 77%] Built target binding_perl_swig make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/CMakeFiles/binding_perl_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_perl_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/perl/CMakeFiles/binding_perl_lib.dir/build.make bindings/perl/CMakeFiles/binding_perl_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 78%] Swig Perl bindings source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl -I/usr/include/ -I/usr/include/ -c++ -perl5 -proxy -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/LibSEDML_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/libsedml.i /usr/include/sbml/xml/XMLInputStream.h:236: Warning 314: 'next' is a perl keyword /builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../../sedml/SedConstructorException.h:67: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/xml/XMLConstructorException.h:72: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/numl/NMBase.h:60: Warning 401: Nothing known about base class 'std::invalid_argument'. Ignored. /usr/include/sbml/SBase.h:811: Warning 509: Overloaded method SBase::getAncestorOfType(int,std::string const &) effectively ignored, /usr/include/sbml/SBase.h:859: Warning 509: as it is shadowed by SBase::getAncestorOfType(int,std::string const) const. [ 78%] Building CXX object bindings/perl/CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/g++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_perl_lib_EXPORTS -I/usr/lib64/perl5/CORE -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/perl/../swig -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl/LibSEDML.cpp [ 79%] Linking CXX shared module LibSEDML.so cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/perl && /usr/bin/cmake -E cmake_link_script CMakeFiles/binding_perl_lib.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -lpthread -shared -o LibSEDML.so CMakeFiles/binding_perl_lib.dir/LibSEDML.cpp.o ../../sedml/libsedml-static.a -lperl /usr/lib64/libsbml.so -lnuml -lnuml -lsbml -lxml2 -lbz2 -lz -lm -ldl make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 79%] Built target binding_perl_lib make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/CMakeFiles/binding_ruby_swig.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_swig make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_swig.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 80%] Swig Ruby source cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby && /usr/bin/swig -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/../swig/ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/../../ -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/../../sedml -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby -I/usr/include/ -I/usr/include/ -c++ -ruby -DSWIGEXPORT -DLIBSBML_CPP_NAMESPACE_BEGIN -DLIBSBML_CPP_NAMESPACE_END -DLIBSBML_CPP_NAMESPACE_QUALIFIER -DLIBSBML_CPP_NAMESPACE_USE -DLIBNUML_CPP_NAMESPACE_BEGIN -DLIBNUML_CPP_NAMESPACE_END -DLIBNUML_CPP_NAMESPACE_QUALIFIER -DLIBNUML_CPP_NAMESPACE_USE -o /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/libsedml.i /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/local.i:129: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/local.i:1: Warning 401: Base class 'std::basic_ios< char >' has no name as it is an empty template instantiated with '%template()'. Ignored. /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/local.i:129: Warning 401: The %template directive must be written before 'std::basic_ios< char >' is used as a base class and be declared with a name. make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 80%] Built target binding_ruby_swig make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/depend make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' cd /builddir/build/BUILD/libSEDML-0.4.4/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/libSEDML-0.4.4 /builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/CMakeFiles/binding_ruby_lib.dir/DependInfo.cmake --color= Scanning dependencies of target binding_ruby_lib make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make -f bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build make[2]: Entering directory '/builddir/build/BUILD/libSEDML-0.4.4/build' [ 81%] Building CXX object bindings/ruby/CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o cd /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby && /usr/bin/g++ -DLIBSEDML_STATIC -DLINUX -DPACKAGE_NAME=\"libsedml\" -DPACKAGE_VERSION=\"0.4.4\" -DUSE_ZLIB -Dbinding_ruby_lib_EXPORTS -I/builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/../.. -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby -I/builddir/build/BUILD/libSEDML-0.4.4/bindings/ruby/../swig -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-strict-aliasing -fPIC -I/usr/include/libxml2 -fPIC -o CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o -c /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'void SWIG_RubyInitializeTrackings()': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:1268:85: error: call of overloaded 'rb_define_virtual_variable(const char [21], VALUE (&)(...), NULL)' is ambiguous 1268 | rb_define_virtual_variable("SWIG_TRACKINGS_COUNT", swig_ruby_trackings_count, NULL); | ^ In file included from /usr/include/ruby/ruby.h:2863, from /usr/include/ruby.h:33, from /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:881: /usr/include/ruby/backward/cxxanyargs.hpp:59:1: note: candidate: 'void ruby::backward::cxxanyargs::rb_define_virtual_variable(const char*, VALUE (*)(...), void (*)(...))' 59 | rb_define_virtual_variable(const char *q, type *w, void_type *e) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/ruby/backward/cxxanyargs.hpp:90:1: note: candidate: 'void ruby::backward::cxxanyargs::rb_define_virtual_variable(const char*, VALUE (*)(...), void (*)(VALUE, ID, VALUE*))' 90 | rb_define_virtual_variable(const char *q, type *w, rb_gvar_setter_t *e) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__slice(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4812:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 4812 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__delete_at(std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4858:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 4858 | catch (std::out_of_range) | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg__at(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4868:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 4868 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_0(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4890:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 4890 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_basic_string_Sl_char_Sg____getitem____SWIG_1(const std::__cxx11::basic_string*, std::__cxx11::basic_string::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4899:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 4899 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5287:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5287 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__delete_at(std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5333:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5333 | catch (std::out_of_range) | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg__at(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5343:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5343 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5365:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5365 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_double_Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5374:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5374 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5669:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5669 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__delete_at(std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5715:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5715 | catch (std::out_of_range) | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg__at(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5725:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5725 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5747:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5747 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_XMLError_Sm__Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5756:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5756 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__slice(std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5997:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 5997 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__delete_at(std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6043:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 6043 | catch (std::out_of_range) | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg__at(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6053:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 6053 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg____getitem____SWIG_0(const std::vector*, std::vector::difference_type, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6075:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 6075 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In function 'VALUE std_vector_Sl_SedError_Sg____getitem____SWIG_1(const std::vector*, std::vector::difference_type)': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6084:19: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] 6084 | catch( std::out_of_range ) { | ^~~~~~~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = long int]': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4810:127: required from here /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::__cxx11::basic_string; Difference = int]': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:4933:131: required from here /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5285:100: required from here /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5408:104: required from here /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5667:107: required from here /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5790:111: required from here /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = long int]': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:5995:104: required from here /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'long int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp: In instantiation of 'Sequence* swig::getslice(const Sequence*, Difference, Difference) [with Sequence = std::vector; Difference = int]': /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:6118:108: required from here /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:69: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ /builddir/build/BUILD/libSEDML-0.4.4/build/bindings/ruby/libsedml_wrap.cpp:3830:82: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 3830 | typename Sequence::size_type ii = swig::check_index(i, size, (i == size && j == size)); | ~~^~~~~~~ make[2]: *** [bindings/ruby/CMakeFiles/binding_ruby_lib.dir/build.make:98: bindings/ruby/CMakeFiles/binding_ruby_lib.dir/libsedml_wrap.cpp.o] Error 1 make[2]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make[1]: *** [CMakeFiles/Makefile2:645: bindings/ruby/CMakeFiles/binding_ruby_lib.dir/all] Error 2 make[1]: Leaving directory '/builddir/build/BUILD/libSEDML-0.4.4/build' make: *** [Makefile:186: all] Error 2 error: Bad exit status from /var/tmp/rpm-tmp.nZAZRS (%build) RPM build errors: Bad exit status from /var/tmp/rpm-tmp.nZAZRS (%build) Child return code was: 1 EXCEPTION: [Error()] Traceback (most recent call last): File "/usr/lib/python3.8/site-packages/mockbuild/trace_decorator.py", line 95, in trace result = func(*args, **kw) File "/usr/lib/python3.8/site-packages/mockbuild/util.py", line 746, in do_with_status raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode) mockbuild.exception.Error: Command failed: # bash --login -c /usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libsedml.spec