Mock Version: 1.4.21 Mock Version: 1.4.21 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libghemical.spec'], chrootPath='/var/lib/mock/f33-build-346280-59393/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libghemical.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False warning: Macro expanded in comment on line 22: %{?_isa} = %{_libint_version} warning: line 23: Possible unexpanded macro in: Requires: libint(api)(riscv-64) = %{_libint_apiversion} Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1598486400 Wrote: /builddir/build/SRPMS/libghemical-3.0.0-14.fc33.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libghemical.spec'], chrootPath='/var/lib/mock/f33-build-346280-59393/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libghemical.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False warning: Macro expanded in comment on line 22: %{?_isa} = %{_libint_version} Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1598486400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.fbzs2l + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libghemical-3.0.0 + /usr/bin/gzip -dc /builddir/build/SOURCES/libghemical-3.0.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd libghemical-3.0.0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.8mNh9j + umask 022 + cd /builddir/build/BUILD + cd libghemical-3.0.0 + sed -i s/blas/flexiblas/g configure.ac + sed -i s/lapack/flexiblas/g configure.ac + autoreconf -v -f -i autoreconf: Entering directory `.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. autoreconf: running: /usr/bin/autoconf --force autoreconf: running: /usr/bin/autoheader --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:86: installing './compile' configure.ac:42: installing './missing' /usr/share/automake-1.16/am/ltlibrary.am: warning: 'libghemical.la': linking libtool libraries using a non-POSIX /usr/share/automake-1.16/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac' src/Makefile.am:1: while processing Libtool library 'libghemical.la' src/Makefile.am: installing './depcomp' autoreconf: Leaving directory `.' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char $\*f$  = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char $\*f$ ;/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 ;/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2020-11-27 15:51:52.808133708 -0500 +++ ./configure 2020-11-27 15:53:09.558134530 -0500 @@ -1912,7 +1912,7 @@ #ifdef __cplusplus extern "C" #endif -char $2 (); +__attribute__ ((used)) char $2 (); /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \$.*\$$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \$.*\$$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2020-11-27 15:53:09.558134530 -0500 +++ ./configure 2020-11-27 15:53:11.068134546 -0500 @@ -6907,7 +6907,7 @@ # Transform an extracted symbol line into a proper C declaration. # Some systems (esp. on ia64) link data and code symbols differently, # so use this general approach. -lt_cv_sys_global_symbol_to_cdecl="sed -n"\ +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* $.*$$/extern int \1();/p' -e 's/^$symcode* .* $.*$$/extern char \1;/p'" $lt_cdecl_hook\ " -e 's/^T .* $.*$$/extern int \1();/p'"\ " -e 's/^$symcode$symcode* .* $.*$$/extern char \1;/p'" @@ -19619,7 +19619,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* $.*$$/extern int \1();/p' -e 's/^$symcode* .* $.*$$/extern char \1;/p'" lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./config.sub ++ basename ./config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub '/usr/lib/rpm/redhat/config.sub' -> './config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./config.guess ++ basename ./config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess '/usr/lib/rpm/redhat/config.guess' -> './config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh + ./configure --build=riscv64-redhat-linux-gnu --host=riscv64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --enable-mopac7 --enable-mpqc --disable-static --disable-sctest checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... riscv64-redhat-linux-gnu checking host system type... riscv64-redhat-linux-gnu checking for riscv64-redhat-linux-gnu-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert riscv64-redhat-linux-gnu file names to riscv64-redhat-linux-gnu format... func_convert_file_noop checking how to convert riscv64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for riscv64-redhat-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for riscv64-redhat-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for riscv64-redhat-linux-gnu-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for riscv64-redhat-linux-gnu-strip... no checking for strip... strip checking for riscv64-redhat-linux-gnu-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ./configure: line 6861: -e 's/^T .* $.*$$/extern int \1();/p' -e 's/^[ABCDGIRSTW][ABCDGIRSTW]* .* $.*$$/extern char \1;/p': No such file or directory ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for riscv64-redhat-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ar... /usr/bin/ar checking for sh... /bin/sh checking whether make sets $(MAKE)... (cached) yes checking for riscv64-redhat-linux-gnu-pkg-config... /usr/bin/riscv64-redhat-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking whether NLS is requested... yes checking for intltool >= 0.40.0... 0.51.0 found checking for intltool-update... /usr/bin/intltool-update checking for intltool-merge... /usr/bin/intltool-merge checking for intltool-extract... /usr/bin/intltool-extract checking for xgettext... /usr/bin/xgettext checking for msgmerge... /usr/bin/msgmerge checking for msgfmt... /usr/bin/msgfmt checking for gmsgfmt... /usr/bin/msgfmt checking for perl... /usr/bin/perl checking for perl >= 5.8.1... 5.32.0 checking for XML::Parser... ok checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking libintl.h usability... yes checking libintl.h presence... yes checking for libintl.h... yes checking for ngettext in libc... yes checking for dgettext in libc... yes checking for bind_textdomain_codeset... yes checking for msgfmt... (cached) /usr/bin/msgfmt checking for dcgettext... yes checking if msgfmt accepts -c... yes checking for gmsgfmt... (cached) /usr/bin/msgfmt checking for xgettext... (cached) /usr/bin/xgettext checking whether build environment is sane... yes checking for acos in -lm... yes checking for main in -lflexiblas... yes checking for main in -lflexiblas... (cached) yes checking for sc-config... /usr/bin/sc-config checking SC - version... yes checking for MOPAC7... yes checking GL/gl.h usability... yes checking GL/gl.h presence... yes checking for GL/gl.h... yes checking for gcc option to accept ISO C99... none needed checking for gcc option to accept ISO Standard C... (cached) none needed checking for inline... inline checking for an ANSI C-conforming const... yes checking for ANSI C header files... (cached) yes configure: build options: ^^^^^^^^^^^^^^ enable MPQC : yes enable MOPAC7 : yes checking that generated files are newer than configure... done checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating libghemical.pc config.status: creating Makefile config.status: creating bin/Makefile config.status: creating bin/amber/Makefile config.status: creating bin/builder/Makefile config.status: creating bin/param_mm/Makefile config.status: creating bin/param_mm/default/Makefile config.status: creating bin/param_mm/prmfit/Makefile config.status: creating bin/param_mm/tripos52/Makefile config.status: creating bin/param_sf/Makefile config.status: creating bin/param_sf/default/Makefile config.status: creating po/Makefile.in config.status: creating src/Makefile config.status: creating src/libghemicalconfig.h config.status: creating src/libghemical-features.h config.status: executing src/libghemicalconfig2.h commands config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing stamp.h commands config.status: executing po/stamp-it commands + make -j4 Making all in src make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' make all-am make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o atom.lo atom.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o bond.lo bond.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o constraint.lo constraint.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o model.lo model.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c constraint.cpp -fPIC -DPIC -o .libs/constraint.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c atom.cpp -fPIC -DPIC -o .libs/atom.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c bond.cpp -fPIC -DPIC -o .libs/bond.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c model.cpp -fPIC -DPIC -o .libs/model.o In file included from local_i18n.h:38, from model.cpp:46: libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined 99 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from model.cpp:35: /usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | In file included from local_i18n.h:38, from model.cpp:46: libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from model.cpp:35: /usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | In file included from local_i18n.h:38, from model.cpp:46: libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined 105 | #define PACKAGE_TARNAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from model.cpp:35: /usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | In file included from local_i18n.h:38, from model.cpp:46: libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined 111 | #define PACKAGE_VERSION "3.0.0" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from model.cpp:35: /usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | atom.cpp:33:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 33 | element element::current_element = element("C"); | ^~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o engine.lo engine.cpp In file included from model.cpp:31: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c engine.cpp -fPIC -DPIC -o .libs/engine.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o typerule.lo typerule.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o utility.lo utility.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c typerule.cpp -fPIC -DPIC -o .libs/typerule.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c utility.cpp -fPIC -DPIC -o .libs/utility.o In file included from model.cpp:35: eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:148: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:135: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:148: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:135: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ model.cpp: In member function 'bool model::FindRing(atom*, atom*, signed char*, i32s, i32s, i32s)': model.cpp:961:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 961 | if (dist == size) return false; iter_cl it1; | ^~ model.cpp:961:34: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 961 | if (dist == size) return false; iter_cl it1; | ^~~~~~~ model.cpp: In member function 'void model::AddHydrogens()': model.cpp:1755:31: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses] 1755 | if (some_atoms_selected && (!(* it1).flags & ATOMFLAG_USER_SELECTED)) | ^~~~~~~~~~~~~~ model.cpp: In member function 'void model::SolvateBox(fGL, fGL, fGL, fGL, model*, const char*)': model.cpp:2248:31: warning: variable 'r1' set but not used [-Wunused-but-set-variable] 2248 | const default_at * at; f64 r1 = 0.150; f64 e1 = 0.175; | ^~ model.cpp:2248:47: warning: variable 'e1' set but not used [-Wunused-but-set-variable] 2248 | const default_at * at; f64 r1 = 0.150; f64 e1 = 0.175; | ^~ model.cpp: In member function 'void model::DoGeomOpt(geomopt_param&, bool)': model.cpp:2663:14: warning: unused variable 'eng_bp' [-Wunused-variable] 2663 | engine_bp * eng_bp = dynamic_cast(eng); | ^~~~~~ model.cpp: In member function 'bool model::GetCRDSetVisible(i32u)': model.cpp:319:23: warning: control reaches end of non-void function [-Wreturn-type] 319 | else assertion_failed(__FILE__, __LINE__, "index overflow"); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)': typerule.cpp:172:28: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'long unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 172 | i32s tmp1[2] = { strlen(buffer), 0 }; | ~~~~~~^~~~~~~~ typerule.cpp:193:7: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 193 | else tmp2[1] = buffer[tmp1[0]++]; element el = element(tmp2); | ^~~~ typerule.cpp:193:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 193 | else tmp2[1] = buffer[tmp1[0]++]; element el = element(tmp2); | ^~~~~~~ typerule.cpp: In member function 'bool typerule::CheckRules(model*, atom*, i32s, i32s)': typerule.cpp:302:31: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 302 | if (atom->GetConnRecCount() != (i32u) sr_vector[rule].data) return false; | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ utility.cpp: In function 'void DefineSecondaryStructure(model*)': utility.cpp:308:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 308 | i32s tmp1[2] = { n1, n2 }; | ^~ utility.cpp:309:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 309 | i32s tmp2[2] = { n1, n2 + 4 }; | ^~ utility.cpp:349:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:349:51: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:352:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:352:47: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:355:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:355:51: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:358:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:358:47: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:361:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:361:47: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:364:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:364:47: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:367:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:367:51: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:370:21: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:370:51: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o chn_info.lo chn_info.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o seqbuild.lo seqbuild.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c chn_info.cpp -fPIC -DPIC -o .libs/chn_info.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o mfinder.lo mfinder.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c seqbuild.cpp -fPIC -DPIC -o .libs/seqbuild.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c mfinder.cpp -fPIC -DPIC -o .libs/mfinder.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_qm.lo eng1_qm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_qm.cpp -fPIC -DPIC -o .libs/eng1_qm.o seqbuild.cpp: In member function 'void sequencebuilder::Build(model*, sb_chain_descriptor*, bool)': seqbuild.cpp:307:22: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'const int' [-Wsign-compare] 307 | for (i32u n1 = 0;n1 < num_res;n1++) | ~~~^~~~~~~~~ seqbuild.cpp:310:23: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'int' [-Wsign-compare] 310 | bool last_res = (n1 == (num_res - 1)); | ~~~^~~~~~~~~~~~~~~~ seqbuild.cpp:317:53: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 317 | if (chde->c_crd_BGN < 0 && chde->c_crd_v[n2].pos == n1) chde->c_crd_BGN = n2; seqbuild.cpp:318:77: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 318 | if (chde->c_crd_BGN >= 0 && chde->c_crd_END < 0 && chde->c_crd_v[n2].pos > n1) chde->c_crd_END = n2; seqbuild.cpp:324:53: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 324 | if (chde->c_tor_BGN < 0 && chde->c_tor_v[n2].pos == n1) chde->c_tor_BGN = n2; seqbuild.cpp:325:77: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 325 | if (chde->c_tor_BGN >= 0 && chde->c_tor_END < 0 && chde->c_tor_v[n2].pos > n1) chde->c_tor_END = n2; seqbuild.cpp: In member function 'void sequencebuilder::Identify(model*)': seqbuild.cpp:541:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 541 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~ seqbuild.cpp:541:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 541 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ seqbuild.cpp:550:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 550 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~ seqbuild.cpp:550:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 550 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ mfinder.cpp: In member function 'void mfinder::Identify(model*)': mfinder.cpp:164:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 164 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~ seqbuild.cpp: In member function 'void sequencebuilder::Convert(sb_chain_descriptor*, sb_data_atm*, fGL*)': seqbuild.cpp:1124:13: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1124 | if (tor_i >= td_v.size()) | ~~~~~~^~~~~~~~~~~~~~ mfinder.cpp:164:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 164 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ mfinder.cpp:173:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 173 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~ mfinder.cpp:173:27: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 173 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ mfinder.cpp:221:9: warning: unused variable 'head_el' [-Wunused-variable] 221 | int head_el = NOT_DEFINED; | ^~~~~~~ mfinder.cpp:222:9: warning: unused variable 'tail_el' [-Wunused-variable] 222 | int tail_el = NOT_DEFINED; | ^~~~~~~ seqbuild.cpp:1298:14: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1298 | if (tor_i >= chde->def_tor.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ seqbuild.cpp:1328:19: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1328 | else if (tor_i < chde->def_tor.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ In file included from local_i18n.h:38, from eng1_qm.cpp:27: libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined 99 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm.cpp:24: /usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | In file included from local_i18n.h:38, from eng1_qm.cpp:27: libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm.cpp:24: /usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | In file included from local_i18n.h:38, from eng1_qm.cpp:27: libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined 105 | #define PACKAGE_TARNAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm.cpp:24: /usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | In file included from local_i18n.h:38, from eng1_qm.cpp:27: libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined 111 | #define PACKAGE_VERSION "3.0.0" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm.cpp:24: /usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | seqbuild.cpp: In function 'std::istream& operator>>(std::istream&, sb_data_td&)': seqbuild.cpp:1577:7: warning: unused variable 'buffer' [-Wunused-variable] 1577 | char buffer[256]; | ^~~~~~ mfinder.cpp: In function 'std::ostream& operator<<(std::ostream&, mf_data_atm&)': mfinder.cpp:703:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 703 | if (p2.tr != NULL) p1 << " " << (* p2.tr); p1 << " "; | ^~ mfinder.cpp:703:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 703 | if (p2.tr != NULL) p1 << " " << (* p2.tr); p1 << " "; | ^~ In file included from eng1_qm.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_qm_mpqc.lo eng1_qm_mpqc.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_qm_mopac.lo eng1_qm_mopac.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_qm_mpqc.cpp -fPIC -DPIC -o .libs/eng1_qm_mpqc.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_qm_mopac.cpp -fPIC -DPIC -o .libs/eng1_qm_mopac.o In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined 99 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm_mpqc.cpp:22: /usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm_mpqc.cpp:22: /usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined 105 | #define PACKAGE_TARNAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm_mpqc.cpp:22: /usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined 111 | #define PACKAGE_VERSION "3.0.0" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm_mpqc.cpp:22: /usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | In file included from /usr/include/mpqc/util/group/linkage.h:32, from /usr/include/mpqc/math/scmat/linkage.h:34, from /usr/include/mpqc/chemistry/qc/scf/linkage.h:37, from eng1_qm_mpqc.cpp:44: /usr/include/mpqc/scconfig.h:278: warning: "PACKAGE_NAME" redefined 278 | #define PACKAGE_NAME "" | In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:99: note: this is the location of the previous definition 99 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/mpqc/util/group/linkage.h:32, from /usr/include/mpqc/math/scmat/linkage.h:34, from /usr/include/mpqc/chemistry/qc/scf/linkage.h:37, from eng1_qm_mpqc.cpp:44: /usr/include/mpqc/scconfig.h:281: warning: "PACKAGE_STRING" redefined 281 | #define PACKAGE_STRING "" | In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:102: note: this is the location of the previous definition 102 | #define PACKAGE_STRING "libghemical 3.0.0" | In file included from /usr/include/mpqc/util/group/linkage.h:32, from /usr/include/mpqc/math/scmat/linkage.h:34, from /usr/include/mpqc/chemistry/qc/scf/linkage.h:37, from eng1_qm_mpqc.cpp:44: /usr/include/mpqc/scconfig.h:284: warning: "PACKAGE_TARNAME" redefined 284 | #define PACKAGE_TARNAME "" | In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:105: note: this is the location of the previous definition 105 | #define PACKAGE_TARNAME "libghemical" | In file included from /usr/include/mpqc/util/group/linkage.h:32, from /usr/include/mpqc/math/scmat/linkage.h:34, from /usr/include/mpqc/chemistry/qc/scf/linkage.h:37, from eng1_qm_mpqc.cpp:44: /usr/include/mpqc/scconfig.h:290: warning: "PACKAGE_VERSION" redefined 290 | #define PACKAGE_VERSION "" | In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:111: note: this is the location of the previous definition 111 | #define PACKAGE_VERSION "3.0.0" | In file included from eng1_qm_mpqc.h:32, from eng1_qm_mpqc.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ In file included from eng1_qm_mopac.h:30, from eng1_qm_mopac.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm_mopac.cpp: In destructor 'eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:8: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:8: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In destructor 'virtual eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:8: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:8: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In member function 'void eng1_qm_mopac::FixMeLaterTSS()': eng1_qm_mopac.cpp:178:8: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 178 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:181:8: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 181 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_mm.lo eng1_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_mm.cpp -fPIC -DPIC -o .libs/eng1_mm.o eng1_qm_mpqc.cpp: In constructor 'eng1_qm_mpqc::eng1_qm_mpqc(setup*, i32u, i32u)': eng1_qm_mpqc.cpp:50:92: warning: base 'eng1_qm' will be initialized after [-Wreorder] 50 | eng1_qm_mpqc::eng1_qm_mpqc(setup * p1, i32u p2, i32u mode) : eng1_qm(p1, p2), engine(p1, p2) | ^ eng1_qm_mpqc.cpp:50:92: warning: base 'engine' [-Wreorder] eng1_qm_mpqc.cpp:50:1: warning: when initialized here [-Wreorder] 50 | eng1_qm_mpqc::eng1_qm_mpqc(setup * p1, i32u p2, i32u mode) : eng1_qm(p1, p2), engine(p1, p2) | ^~~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_mm_tripos52.lo eng1_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_mm_tripos52.cpp -fPIC -DPIC -o .libs/eng1_mm_tripos52.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o tab_mm_tripos52.lo tab_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c tab_mm_tripos52.cpp -fPIC -DPIC -o .libs/tab_mm_tripos52.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_mm_default.lo eng1_mm_default.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o tab_mm_default.lo tab_mm_default.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_mm_default.cpp -fPIC -DPIC -o .libs/eng1_mm_default.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c tab_mm_default.cpp -fPIC -DPIC -o .libs/tab_mm_default.o tab_mm_default.cpp:691:3: warning: multi-line comment [-Wcomment] 691 | // / \ | ^ tab_mm_default.cpp: In member function 'bool default_tables::e_Init(eng1_mm*, mm_default_bt3*, i32s*)': tab_mm_default.cpp:3178:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 3178 | if (z < 1) z = 1; z -= 1; | ^~ tab_mm_default.cpp:3178:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 3178 | if (z < 1) z = 1; z -= 1; | ^ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_mm_prmfit.lo eng1_mm_prmfit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_mm_prmfit.cpp -fPIC -DPIC -o .libs/eng1_mm_prmfit.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o tab_mm_prmfit.lo tab_mm_prmfit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c tab_mm_prmfit.cpp -fPIC -DPIC -o .libs/tab_mm_prmfit.o tab_mm_prmfit.cpp:597:3: warning: multi-line comment [-Wcomment] 597 | // / \ | ^ eng1_mm_prmfit.cpp: In constructor 'eng1_mm_prmfit::eng1_mm_prmfit(setup*, i32u, prmfit_tables&)': eng1_mm_prmfit.cpp:329:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 329 | if (query.index == NOT_DEFINED) bt3_err++; | ^~ eng1_mm_prmfit.cpp:331:6: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 331 | newbt3.fc1 = query.fc1; | ^~~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_sf.lo eng1_sf.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_sf.cpp -fPIC -DPIC -o .libs/eng1_sf.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_sf_ua.lo eng1_sf_ua.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_sf_ua.cpp -fPIC -DPIC -o .libs/eng1_sf_ua.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng1_sf_cg.lo eng1_sf_cg.cpp /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o eng2_qm_mm.lo eng2_qm_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng1_sf_cg.cpp -fPIC -DPIC -o .libs/eng1_sf_cg.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o notice.lo notice.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c eng2_qm_mm.cpp -fPIC -DPIC -o .libs/eng2_qm_mm.o In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined 99 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from eng2_qm_mm.cpp:22: /usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from eng2_qm_mm.cpp:22: /usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined 105 | #define PACKAGE_TARNAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from eng2_qm_mm.cpp:22: /usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined 111 | #define PACKAGE_VERSION "3.0.0" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from eng2_qm_mm.cpp:22: /usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c notice.cpp -fPIC -DPIC -o .libs/notice.o eng1_sf.cpp: In member function 'void setup1_sf::StorePStatesToModel(eng1_sf*)': eng1_sf.cpp:965:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 965 | if (tmpc < -0.5) charge -= 1; if (tmpc > +0.5) charge += 1; | ^~ eng1_sf.cpp:965:35: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 965 | if (tmpc < -0.5) charge -= 1; if (tmpc > +0.5) charge += 1; | ^~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o conjgrad.lo conjgrad.cpp eng1_sf.cpp: In constructor 'eng1_sf::eng1_sf(setup*, i32u, bool, bool)': eng1_sf.cpp:1444:6: warning: variable 'h4flag_0' set but not used [-Wunused-but-set-variable] 1444 | bool h4flag_0 = false; if ((indr1 - 0) >= 0 && mysu->chn_vector[indc1].res_vector[indr1 - 0].state == SF_STATE_HELIX4) h4flag_0 = true; | ^~~~~~~~ eng1_sf.cpp:1447:6: warning: variable 'h4flag_3' set but not used [-Wunused-but-set-variable] 1447 | bool h4flag_3 = false; if ((indr1 - 3) >= 0 && mysu->chn_vector[indc1].res_vector[indr1 - 3].state == SF_STATE_HELIX4) h4flag_3 = true; | ^~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c conjgrad.cpp -fPIC -DPIC -o .libs/conjgrad.o In file included from eng2_qm_mm.h:28, from eng2_qm_mm.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o intcrd.lo intcrd.cpp In file included from eng2_qm_mm.cpp:22: eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:148: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:135: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:148: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:135: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c intcrd.cpp -fPIC -DPIC -o .libs/intcrd.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o search.lo search.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c search.cpp -fPIC -DPIC -o .libs/search.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o geomopt.lo geomopt.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c geomopt.cpp -fPIC -DPIC -o .libs/geomopt.o intcrd.cpp: In constructor 'intcrd::intcrd(model&, i32s, i32s)': intcrd.cpp:82:33: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 82 | if ((* it1).GetConnRecCount() < nbonds) | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ In file included from search.h:35, from search.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ search.cpp: In constructor 'transition_state_search::transition_state_search(model*, f64, f64)': search.cpp:513:22: warning: comparison of integer expressions of different signedness: 'i32s' {aka 'int'} and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 513 | for (i32s n1 = 0;n1 < mdl->GetCRDSetCount();n1++) | ~~~^~~~~~~~~~~~~~~~~~~~~~~ search.cpp:795:25: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'int' [-Wsign-compare] 795 | if (engQM->l2g_qm[ii] != ii) problems = true; | ~~~~~~~~~~~~~~~~~~^~~~~ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o moldyn.lo moldyn.cpp eng1_sf.cpp: In member function 'eng1_sf::ComputeBT3(unsigned int)': eng1_sf.cpp:3463:28: warning: 'cs[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] 3463 | loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2]; | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3464:28: warning: 'sn[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] 3464 | loop1 += fss[0] * sn[0] + fss[1] * sn[1] + fss[2] * sn[2]; | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3464:45: warning: 'sn[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] 3464 | loop1 += fss[0] * sn[0] + fss[1] * sn[1] + fss[2] * sn[2]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3463:45: warning: 'cs[2]' may be used uninitialized in this function [-Wmaybe-uninitialized] 3463 | loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3463:37: warning: 'cs[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] 3463 | loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2]; | ~~~~~~~^~~~~~~ eng1_sf.cpp:3471:44: warning: 'sn[1]' may be used uninitialized in this function [-Wmaybe-uninitialized] 3471 | loop2 -= fsc[0] * sn[0] + 2.0 * fsc[1] * sn[1] + 3.0 * fsc[2] * sn[2]; | ~~~~~~~~~~~~~^~~~~~~ In file included from geomopt.h:31, from geomopt.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c moldyn.cpp -fPIC -DPIC -o .libs/moldyn.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o pop_ana.lo pop_ana.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c pop_ana.cpp -fPIC -DPIC -o .libs/pop_ana.o /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o sasaeval.lo sasaeval.cpp moldyn.cpp: In member function 'virtual void moldyn::TakeMDStep(bool, bool)': moldyn.cpp:149:6: warning: variable 'current_temperature' set but not used [-Wunused-but-set-variable] 149 | f64 current_temperature = ConvEKinTemp(ekin); | ^~~~~~~~~~~~~~~~~~~ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c sasaeval.cpp -fPIC -DPIC -o .libs/sasaeval.o moldyn.cpp:242:41: warning: 'volume' may be used uninitialized in this function [-Wmaybe-uninitialized] 242 | saved_density = 0.001 * sum_of_masses / volume; // kg/dm^3 | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ In file included from pop_ana.h:31, from pop_ana.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:148: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:135: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o resonance.lo resonance.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c resonance.cpp -fPIC -DPIC -o .libs/resonance.o sasaeval.cpp: In constructor 'sasaeval::sasaeval(engine*)': sasaeval.cpp:59:20: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'i32s' {aka 'int'} [-Wsign-compare] 59 | for (i32u i = 0;i < natm_GLOB;i++) | ~~^~~~~~~~~~~ /bin/sh ../libtool --tag=CXX --mode=link g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -version-info 5:1:0 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libghemical.la -rpath /usr/lib64 atom.lo bond.lo constraint.lo model.lo engine.lo typerule.lo utility.lo chn_info.lo seqbuild.lo mfinder.lo eng1_qm.lo eng1_qm_mpqc.lo eng1_qm_mopac.lo eng1_mm.lo eng1_mm_tripos52.lo tab_mm_tripos52.lo eng1_mm_default.lo tab_mm_default.lo eng1_mm_prmfit.lo tab_mm_prmfit.lo eng1_sf.lo eng1_sf_ua.lo eng1_sf_cg.lo eng2_qm_mm.lo notice.lo conjgrad.lo intcrd.lo search.lo geomopt.lo moldyn.lo pop_ana.lo sasaeval.lo resonance.lo -lflexiblas -lflexiblas -lm -L/usr/lib64 -lSCoptions -lSCpsi -lSCmbptr12 -lSCmbpt -lSCwfn -lSCsolvent -lSCdft -lSCscf -lSCcints -lSCintv3 -lSCoint3 -lSCbasis -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -L/usr/lib64/atlas -lderiv -lr12 -lint -lm -ldl -L/usr/lib64/atlas -ltatlas -lpthread -L/usr/lib64/atlas -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -ltatlas -lgfortran -lm -L/usr/lib64/atlas -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -ltatlas -lgfortran -lm -L/usr/lib -lmopac7 libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/riscv64-redhat-linux/10/crti.o /usr/lib/gcc/riscv64-redhat-linux/10/crtbeginS.o .libs/atom.o .libs/bond.o .libs/constraint.o .libs/model.o .libs/engine.o .libs/typerule.o .libs/utility.o .libs/chn_info.o .libs/seqbuild.o .libs/mfinder.o .libs/eng1_qm.o .libs/eng1_qm_mpqc.o .libs/eng1_qm_mopac.o .libs/eng1_mm.o .libs/eng1_mm_tripos52.o .libs/tab_mm_tripos52.o .libs/eng1_mm_default.o .libs/tab_mm_default.o .libs/eng1_mm_prmfit.o .libs/tab_mm_prmfit.o .libs/eng1_sf.o .libs/eng1_sf_ua.o .libs/eng1_sf_cg.o .libs/eng2_qm_mm.o .libs/notice.o .libs/conjgrad.o .libs/intcrd.o .libs/search.o .libs/geomopt.o .libs/moldyn.o .libs/pop_ana.o .libs/sasaeval.o .libs/resonance.o -lflexiblas -L/usr/lib64 -lSCoptions -lSCpsi -lSCmbptr12 -lSCmbpt -lSCwfn -lSCsolvent -lSCdft -lSCscf -lSCcints -lSCintv3 -lSCoint3 -lSCbasis -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -L/usr/lib64/atlas -lderiv -lr12 -lint -ldl -lpthread -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -ltatlas -lgfortran -L/usr/lib -lmopac7 -L/usr/lib/gcc/riscv64-redhat-linux/10 -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/riscv64-redhat-linux/10/crtendS.o /usr/lib/gcc/riscv64-redhat-linux/10/crtn.o -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -flto=auto -g -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-soname -Wl,libghemical.so.5 -o .libs/libghemical.so.5.0.1 /usr/bin/ld: cannot find -ltatlas collect2: error: ld returned 1 exit status make[2]: *** [Makefile:575: libghemical.la] Error 1 make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[1]: *** [Makefile:482: all] Error 2 make: *** [Makefile:482: all-recursive] Error 1 error: Bad exit status from /var/tmp/rpm-tmp.8mNh9j (%build) RPM build errors: Macro expanded in comment on line 22: %{?_isa} = %{_libint_version} Bad exit status from /var/tmp/rpm-tmp.8mNh9j (%build) Child return code was: 1 EXCEPTION: [Error()] Traceback (most recent call last): File "/usr/lib/python3.8/site-packages/mockbuild/trace_decorator.py", line 95, in trace result = func(*args, **kw) File "/usr/lib/python3.8/site-packages/mockbuild/util.py", line 746, in do_with_status raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode) mockbuild.exception.Error: Command failed: # bash --login -c /usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libghemical.spec