Mock Version: 1.4.9 Mock Version: 1.4.9 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libpwiz.spec'], chrootPath='/var/lib/mock/f29-build-30885-16551/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libpwiz.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False Building target platforms: riscv64 Building for target riscv64 Wrote: /builddir/build/SRPMS/libpwiz-3.0.10505-2.fc29.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libpwiz.spec'], chrootPath='/var/lib/mock/f29-build-30885-16551/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libpwiz.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False Building target platforms: riscv64 Building for target riscv64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.JRmcXP + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf pwiz + /usr/bin/gzip -dc /builddir/build/SOURCES/libpwiz_src_3_0_10505.tgz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd pwiz + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + tar -xvf /builddir/build/SOURCES/eigen-nnls.tar.xz eigen/ eigen/src/ eigen/src/Cholesky/ eigen/src/Cholesky/LDLT.h eigen/src/Cholesky/LLT.h eigen/src/Cholesky/LLT_MKL.h eigen/src/CholmodSupport/ eigen/src/CholmodSupport/CholmodSupport.h eigen/src/Core/ eigen/src/Core/Array.h eigen/src/Core/ArrayBase.h eigen/src/Core/ArrayWrapper.h eigen/src/Core/Assign.h eigen/src/Core/Assign_MKL.h eigen/src/Core/BandMatrix.h eigen/src/Core/Block.h eigen/src/Core/BooleanRedux.h eigen/src/Core/CommaInitializer.h eigen/src/Core/CoreIterators.h eigen/src/Core/CwiseBinaryOp.h eigen/src/Core/CwiseNullaryOp.h eigen/src/Core/CwiseUnaryOp.h eigen/src/Core/CwiseUnaryView.h eigen/src/Core/DenseBase.h eigen/src/Core/DenseCoeffsBase.h eigen/src/Core/DenseStorage.h eigen/src/Core/Diagonal.h eigen/src/Core/DiagonalMatrix.h eigen/src/Core/DiagonalProduct.h eigen/src/Core/Dot.h eigen/src/Core/EigenBase.h eigen/src/Core/Flagged.h eigen/src/Core/ForceAlignedAccess.h eigen/src/Core/Functors.h eigen/src/Core/Fuzzy.h eigen/src/Core/GeneralProduct.h eigen/src/Core/GenericPacketMath.h eigen/src/Core/GlobalFunctions.h eigen/src/Core/IO.h eigen/src/Core/Map.h eigen/src/Core/MapBase.h eigen/src/Core/MathFunctions.h eigen/src/Core/Matrix.h eigen/src/Core/MatrixBase.h eigen/src/Core/NestByValue.h eigen/src/Core/NoAlias.h eigen/src/Core/NumTraits.h eigen/src/Core/PermutationMatrix.h eigen/src/Core/PlainObjectBase.h eigen/src/Core/ProductBase.h eigen/src/Core/Random.h eigen/src/Core/Redux.h eigen/src/Core/Ref.h eigen/src/Core/Replicate.h eigen/src/Core/ReturnByValue.h eigen/src/Core/Reverse.h eigen/src/Core/Select.h eigen/src/Core/SelfAdjointView.h eigen/src/Core/SelfCwiseBinaryOp.h eigen/src/Core/SolveTriangular.h eigen/src/Core/StableNorm.h eigen/src/Core/Stride.h eigen/src/Core/Swap.h eigen/src/Core/Transpose.h eigen/src/Core/Transpositions.h eigen/src/Core/TriangularMatrix.h eigen/src/Core/VectorBlock.h eigen/src/Core/VectorwiseOp.h eigen/src/Core/Visitor.h eigen/src/Core/arch/ eigen/src/Core/arch/AltiVec/ eigen/src/Core/arch/AltiVec/Complex.h eigen/src/Core/arch/AltiVec/PacketMath.h eigen/src/Core/arch/Default/ eigen/src/Core/arch/Default/Settings.h eigen/src/Core/arch/NEON/ eigen/src/Core/arch/NEON/Complex.h eigen/src/Core/arch/NEON/PacketMath.h eigen/src/Core/arch/SSE/ eigen/src/Core/arch/SSE/Complex.h eigen/src/Core/arch/SSE/MathFunctions.h eigen/src/Core/arch/SSE/PacketMath.h eigen/src/Core/products/ eigen/src/Core/products/CoeffBasedProduct.h eigen/src/Core/products/GeneralBlockPanelKernel.h eigen/src/Core/products/GeneralMatrixMatrix.h eigen/src/Core/products/GeneralMatrixMatrixTriangular.h eigen/src/Core/products/GeneralMatrixMatrixTriangular_MKL.h eigen/src/Core/products/GeneralMatrixMatrix_MKL.h eigen/src/Core/products/GeneralMatrixVector.h eigen/src/Core/products/GeneralMatrixVector_MKL.h eigen/src/Core/products/Parallelizer.h eigen/src/Core/products/SelfadjointMatrixMatrix.h eigen/src/Core/products/SelfadjointMatrixMatrix_MKL.h eigen/src/Core/products/SelfadjointMatrixVector.h eigen/src/Core/products/SelfadjointMatrixVector_MKL.h eigen/src/Core/products/SelfadjointProduct.h eigen/src/Core/products/SelfadjointRank2Update.h eigen/src/Core/products/TriangularMatrixMatrix.h eigen/src/Core/products/TriangularMatrixMatrix_MKL.h eigen/src/Core/products/TriangularMatrixVector.h eigen/src/Core/products/TriangularMatrixVector_MKL.h eigen/src/Core/products/TriangularSolverMatrix.h eigen/src/Core/products/TriangularSolverMatrix_MKL.h eigen/src/Core/products/TriangularSolverVector.h eigen/src/Core/util/ eigen/src/Core/util/BlasUtil.h eigen/src/Core/util/Constants.h eigen/src/Core/util/DisableStupidWarnings.h eigen/src/Core/util/ForwardDeclarations.h eigen/src/Core/util/MKL_support.h eigen/src/Core/util/Macros.h eigen/src/Core/util/Memory.h eigen/src/Core/util/Meta.h eigen/src/Core/util/NonMPL2.h eigen/src/Core/util/ReenableStupidWarnings.h eigen/src/Core/util/StaticAssert.h eigen/src/Core/util/XprHelper.h eigen/src/Eigen2Support/ eigen/src/Eigen2Support/Block.h eigen/src/Eigen2Support/Cwise.h eigen/src/Eigen2Support/CwiseOperators.h eigen/src/Eigen2Support/LU.h eigen/src/Eigen2Support/Lazy.h eigen/src/Eigen2Support/LeastSquares.h eigen/src/Eigen2Support/Macros.h eigen/src/Eigen2Support/MathFunctions.h eigen/src/Eigen2Support/Memory.h eigen/src/Eigen2Support/Meta.h eigen/src/Eigen2Support/Minor.h eigen/src/Eigen2Support/QR.h eigen/src/Eigen2Support/SVD.h eigen/src/Eigen2Support/TriangularSolver.h eigen/src/Eigen2Support/VectorBlock.h eigen/src/Eigen2Support/Geometry/ eigen/src/Eigen2Support/Geometry/AlignedBox.h eigen/src/Eigen2Support/Geometry/All.h eigen/src/Eigen2Support/Geometry/AngleAxis.h eigen/src/Eigen2Support/Geometry/Hyperplane.h eigen/src/Eigen2Support/Geometry/ParametrizedLine.h eigen/src/Eigen2Support/Geometry/Quaternion.h eigen/src/Eigen2Support/Geometry/Rotation2D.h eigen/src/Eigen2Support/Geometry/RotationBase.h eigen/src/Eigen2Support/Geometry/Scaling.h eigen/src/Eigen2Support/Geometry/Transform.h eigen/src/Eigen2Support/Geometry/Translation.h eigen/src/Eigenvalues/ eigen/src/Eigenvalues/ComplexEigenSolver.h eigen/src/Eigenvalues/ComplexSchur.h eigen/src/Eigenvalues/ComplexSchur_MKL.h eigen/src/Eigenvalues/EigenSolver.h eigen/src/Eigenvalues/GeneralizedEigenSolver.h eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h eigen/src/Eigenvalues/HessenbergDecomposition.h eigen/src/Eigenvalues/MatrixBaseEigenvalues.h eigen/src/Eigenvalues/RealQZ.h eigen/src/Eigenvalues/RealSchur.h eigen/src/Eigenvalues/RealSchur_MKL.h eigen/src/Eigenvalues/SelfAdjointEigenSolver.h eigen/src/Eigenvalues/SelfAdjointEigenSolver_MKL.h eigen/src/Eigenvalues/Tridiagonalization.h eigen/src/Geometry/ eigen/src/Geometry/AlignedBox.h eigen/src/Geometry/AngleAxis.h eigen/src/Geometry/EulerAngles.h eigen/src/Geometry/Homogeneous.h eigen/src/Geometry/Hyperplane.h eigen/src/Geometry/OrthoMethods.h eigen/src/Geometry/ParametrizedLine.h eigen/src/Geometry/Quaternion.h eigen/src/Geometry/Rotation2D.h eigen/src/Geometry/RotationBase.h eigen/src/Geometry/Scaling.h eigen/src/Geometry/Transform.h eigen/src/Geometry/Translation.h eigen/src/Geometry/Umeyama.h eigen/src/Geometry/arch/ eigen/src/Geometry/arch/Geometry_SSE.h eigen/src/Householder/ eigen/src/Householder/BlockHouseholder.h eigen/src/Householder/Householder.h eigen/src/Householder/HouseholderSequence.h eigen/src/IterativeLinearSolvers/ eigen/src/IterativeLinearSolvers/BasicPreconditioners.h eigen/src/IterativeLinearSolvers/BiCGSTAB.h eigen/src/IterativeLinearSolvers/ConjugateGradient.h eigen/src/IterativeLinearSolvers/IncompleteLUT.h eigen/src/IterativeLinearSolvers/IterativeSolverBase.h eigen/src/Jacobi/ eigen/src/Jacobi/Jacobi.h eigen/src/LU/ eigen/src/LU/Determinant.h eigen/src/LU/FullPivLU.h eigen/src/LU/Inverse.h eigen/src/LU/PartialPivLU.h eigen/src/LU/PartialPivLU_MKL.h eigen/src/LU/arch/ eigen/src/LU/arch/Inverse_SSE.h eigen/src/MetisSupport/ eigen/src/MetisSupport/MetisSupport.h eigen/src/OrderingMethods/ eigen/src/OrderingMethods/Amd.h eigen/src/OrderingMethods/Eigen_Colamd.h eigen/src/OrderingMethods/Ordering.h eigen/src/PaStiXSupport/ eigen/src/PaStiXSupport/PaStiXSupport.h eigen/src/PardisoSupport/ eigen/src/PardisoSupport/PardisoSupport.h eigen/src/QR/ eigen/src/QR/ColPivHouseholderQR.h eigen/src/QR/ColPivHouseholderQR_MKL.h eigen/src/QR/FullPivHouseholderQR.h eigen/src/QR/HouseholderQR.h eigen/src/QR/HouseholderQR_MKL.h eigen/src/SPQRSupport/ eigen/src/SPQRSupport/SuiteSparseQRSupport.h eigen/src/SVD/ eigen/src/SVD/JacobiSVD.h eigen/src/SVD/JacobiSVD_MKL.h eigen/src/SVD/UpperBidiagonalization.h eigen/src/SparseCholesky/ eigen/src/SparseCholesky/SimplicialCholesky.h eigen/src/SparseCholesky/SimplicialCholesky_impl.h eigen/src/SparseCore/ eigen/src/SparseCore/AmbiVector.h eigen/src/SparseCore/CompressedStorage.h eigen/src/SparseCore/ConservativeSparseSparseProduct.h eigen/src/SparseCore/MappedSparseMatrix.h eigen/src/SparseCore/SparseBlock.h eigen/src/SparseCore/SparseColEtree.h eigen/src/SparseCore/SparseCwiseBinaryOp.h eigen/src/SparseCore/SparseCwiseUnaryOp.h eigen/src/SparseCore/SparseDenseProduct.h eigen/src/SparseCore/SparseDiagonalProduct.h eigen/src/SparseCore/SparseDot.h eigen/src/SparseCore/SparseFuzzy.h eigen/src/SparseCore/SparseMatrix.h eigen/src/SparseCore/SparseMatrixBase.h eigen/src/SparseCore/SparsePermutation.h eigen/src/SparseCore/SparseProduct.h eigen/src/SparseCore/SparseRedux.h eigen/src/SparseCore/SparseSelfAdjointView.h eigen/src/SparseCore/SparseSparseProductWithPruning.h eigen/src/SparseCore/SparseTranspose.h eigen/src/SparseCore/SparseTriangularView.h eigen/src/SparseCore/SparseUtil.h eigen/src/SparseCore/SparseVector.h eigen/src/SparseCore/SparseView.h eigen/src/SparseCore/TriangularSolver.h eigen/src/SparseLU/ eigen/src/SparseLU/SparseLU.h eigen/src/SparseLU/SparseLUImpl.h eigen/src/SparseLU/SparseLU_Memory.h eigen/src/SparseLU/SparseLU_Structs.h eigen/src/SparseLU/SparseLU_SupernodalMatrix.h eigen/src/SparseLU/SparseLU_Utils.h eigen/src/SparseLU/SparseLU_column_bmod.h eigen/src/SparseLU/SparseLU_column_dfs.h eigen/src/SparseLU/SparseLU_copy_to_ucol.h eigen/src/SparseLU/SparseLU_gemm_kernel.h eigen/src/SparseLU/SparseLU_heap_relax_snode.h eigen/src/SparseLU/SparseLU_kernel_bmod.h eigen/src/SparseLU/SparseLU_panel_bmod.h eigen/src/SparseLU/SparseLU_panel_dfs.h eigen/src/SparseLU/SparseLU_pivotL.h eigen/src/SparseLU/SparseLU_pruneL.h eigen/src/SparseLU/SparseLU_relax_snode.h eigen/src/SparseQR/ eigen/src/SparseQR/SparseQR.h eigen/src/StlSupport/ eigen/src/StlSupport/StdDeque.h eigen/src/StlSupport/StdList.h eigen/src/StlSupport/StdVector.h eigen/src/StlSupport/details.h eigen/src/SuperLUSupport/ eigen/src/SuperLUSupport/SuperLUSupport.h eigen/src/UmfPackSupport/ eigen/src/UmfPackSupport/UmfPackSupport.h eigen/src/misc/ eigen/src/misc/Image.h eigen/src/misc/Kernel.h eigen/src/misc/Solve.h eigen/src/misc/SparseSolve.h eigen/src/misc/blas.h eigen/src/plugins/ eigen/src/plugins/ArrayCwiseBinaryOps.h eigen/src/plugins/ArrayCwiseUnaryOps.h eigen/src/plugins/BlockMethods.h eigen/src/plugins/CommonCwiseBinaryOps.h eigen/src/plugins/CommonCwiseUnaryOps.h eigen/src/plugins/MatrixCwiseBinaryOps.h eigen/src/plugins/MatrixCwiseUnaryOps.h eigen/Cholesky eigen/CholmodSupport eigen/Core eigen/Dense eigen/Eigen eigen/Eigen2Support eigen/Eigenvalues eigen/Geometry eigen/Householder eigen/IterativeLinearSolvers eigen/Jacobi eigen/LU eigen/LeastSquares eigen/MetisSupport eigen/OrderingMethods eigen/PaStiXSupport eigen/PardisoSupport eigen/QR eigen/QtAlignedMalloc eigen/SPQRSupport eigen/SVD eigen/Sparse eigen/SparseCholesky eigen/SparseCore eigen/SparseLU eigen/SparseQR eigen/StdDeque eigen/StdList eigen/StdVector eigen/SuperLUSupport eigen/UmfPackSupport eigen/eigen.natvis eigen/nnls.h + install -pm 755 /builddir/build/SOURCES/libpwiz-tiny.pwiz.1.1.1.mzML . BUILDSTDERR: ++ find . -type f '(' -name '*.cpp' -o -name '*.hpp' ')' + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./doc/dox/mainpage.hpp + dos2unix ./doc/dox/mainpage.hpp BUILDSTDERR: dos2unix: converting file ./doc/dox/mainpage.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/commandline/idconvert.cpp + dos2unix ./pwiz_tools/commandline/idconvert.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/commandline/idconvert.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/commandline/pepcat.cpp + dos2unix ./pwiz_tools/commandline/pepcat.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/commandline/pepcat.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/commandline/msconvert.cpp + dos2unix ./pwiz_tools/commandline/msconvert.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/commandline/msconvert.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/examples/txt2mzml.cpp + dos2unix ./pwiz_tools/examples/txt2mzml.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/examples/txt2mzml.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/examples/mscat.cpp + dos2unix ./pwiz_tools/examples/mscat.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/examples/mscat.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/examples/hello_msdata.cpp + dos2unix ./pwiz_tools/examples/hello_msdata.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/examples/hello_msdata.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/examples/write_traml_example_files.cpp + dos2unix ./pwiz_tools/examples/write_traml_example_files.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/examples/write_traml_example_files.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/examples/write_mzid_example_files.cpp + dos2unix ./pwiz_tools/examples/write_mzid_example_files.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/examples/write_mzid_example_files.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/examples/write_example_files.cpp + dos2unix ./pwiz_tools/examples/write_example_files.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/examples/write_example_files.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/examples/hello_analyzer_2.cpp + dos2unix ./pwiz_tools/examples/hello_analyzer_2.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/examples/hello_analyzer_2.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/examples/hello_analyzer.cpp + dos2unix ./pwiz_tools/examples/hello_analyzer.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/examples/hello_analyzer.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/examples/write_proteome_example_files.cpp + dos2unix ./pwiz_tools/examples/write_proteome_example_files.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/examples/write_proteome_example_files.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/common/MSDataAnalyzerApplication.hpp + dos2unix ./pwiz_tools/common/MSDataAnalyzerApplication.hpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/common/MSDataAnalyzerApplication.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/common/FullReaderList.hpp + dos2unix ./pwiz_tools/common/FullReaderList.hpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/common/FullReaderList.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/common/MSDataAnalyzerApplicationTest.cpp + dos2unix ./pwiz_tools/common/MSDataAnalyzerApplicationTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/common/MSDataAnalyzerApplicationTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz_tools/common/MSDataAnalyzerApplication.cpp + dos2unix ./pwiz_tools/common/MSDataAnalyzerApplication.cpp BUILDSTDERR: dos2unix: converting file ./pwiz_tools/common/MSDataAnalyzerApplication.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/ClickwrapPrompter.hpp + dos2unix ./pwiz/utility/misc/ClickwrapPrompter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/ClickwrapPrompter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Environment.hpp + dos2unix ./pwiz/utility/misc/Environment.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Environment.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Base64.cpp + dos2unix ./pwiz/utility/misc/Base64.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Base64.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/FilesystemTest.cpp + dos2unix ./pwiz/utility/misc/FilesystemTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/FilesystemTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Base64Test.cpp + dos2unix ./pwiz/utility/misc/Base64Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Base64Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/IntegerSet.cpp + dos2unix ./pwiz/utility/misc/IntegerSet.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/IntegerSet.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Once.hpp + dos2unix ./pwiz/utility/misc/Once.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Once.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/ExceptionTest.cpp + dos2unix ./pwiz/utility/misc/ExceptionTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/ExceptionTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Export.hpp + dos2unix ./pwiz/utility/misc/Export.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Export.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/DateTime.hpp + dos2unix ./pwiz/utility/misc/DateTime.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/DateTime.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/IntegerSet.hpp + dos2unix ./pwiz/utility/misc/IntegerSet.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/IntegerSet.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/CharIndexedVector.hpp + dos2unix ./pwiz/utility/misc/CharIndexedVector.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/CharIndexedVector.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/SHA1Calculator.hpp + dos2unix ./pwiz/utility/misc/SHA1Calculator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/SHA1Calculator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/VendorReaderTestHarness.hpp + dos2unix ./pwiz/utility/misc/VendorReaderTestHarness.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/VendorReaderTestHarness.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Filesystem.cpp + dos2unix ./pwiz/utility/misc/Filesystem.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Filesystem.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/TabReader.cpp + dos2unix ./pwiz/utility/misc/TabReader.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/TabReader.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/optimized_lexical_cast.hpp + dos2unix ./pwiz/utility/misc/optimized_lexical_cast.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/optimized_lexical_cast.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/SHA1_ostream.hpp + dos2unix ./pwiz/utility/misc/SHA1_ostream.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/SHA1_ostream.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/TabReader.hpp + dos2unix ./pwiz/utility/misc/TabReader.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/TabReader.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Filesystem.hpp + dos2unix ./pwiz/utility/misc/Filesystem.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Filesystem.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Exception.hpp + dos2unix ./pwiz/utility/misc/Exception.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Exception.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Std.hpp + dos2unix ./pwiz/utility/misc/Std.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Std.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/FailTest.cpp + dos2unix ./pwiz/utility/misc/FailTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/FailTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/almost_equal.hpp + dos2unix ./pwiz/utility/misc/almost_equal.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/almost_equal.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/VendorReaderTestHarness.cpp + dos2unix ./pwiz/utility/misc/VendorReaderTestHarness.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/VendorReaderTestHarness.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/random_access_compressed_ifstream.hpp + dos2unix ./pwiz/utility/misc/random_access_compressed_ifstream.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/random_access_compressed_ifstream.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Base64.hpp + dos2unix ./pwiz/utility/misc/Base64.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Base64.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/endian.hpp + dos2unix ./pwiz/utility/misc/endian.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/endian.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/IterationListener.cpp + dos2unix ./pwiz/utility/misc/IterationListener.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/IterationListener.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/almost_equal_test.cpp + dos2unix ./pwiz/utility/misc/almost_equal_test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/almost_equal_test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Container.hpp + dos2unix ./pwiz/utility/misc/Container.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Container.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/ClickwrapPrompterTest.cpp + dos2unix ./pwiz/utility/misc/ClickwrapPrompterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/ClickwrapPrompterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/endian_test.cpp + dos2unix ./pwiz/utility/misc/endian_test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/endian_test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Image.hpp + dos2unix ./pwiz/utility/misc/Image.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Image.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Stream.hpp + dos2unix ./pwiz/utility/misc/Stream.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Stream.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/shared_map.hpp + dos2unix ./pwiz/utility/misc/shared_map.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/shared_map.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/String.hpp + dos2unix ./pwiz/utility/misc/String.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/String.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/IterationListenerTest.cpp + dos2unix ./pwiz/utility/misc/IterationListenerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/IterationListenerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/SHA1CalculatorTest.cpp + dos2unix ./pwiz/utility/misc/SHA1CalculatorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/SHA1CalculatorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/SHA1Calculator.cpp + dos2unix ./pwiz/utility/misc/SHA1Calculator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/SHA1Calculator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/SHA1.cpp + dos2unix ./pwiz/utility/misc/SHA1.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/SHA1.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/mru_list_test.cpp + dos2unix ./pwiz/utility/misc/mru_list_test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/mru_list_test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/MSIHandler.hpp + dos2unix ./pwiz/utility/misc/MSIHandler.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/MSIHandler.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/ClickwrapPrompter.cpp + dos2unix ./pwiz/utility/misc/ClickwrapPrompter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/ClickwrapPrompter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/cpp_cli_utilities.hpp + dos2unix ./pwiz/utility/misc/cpp_cli_utilities.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/cpp_cli_utilities.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/unit.hpp + dos2unix ./pwiz/utility/misc/unit.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/unit.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/random_access_compressed_ifstream.cpp + dos2unix ./pwiz/utility/misc/random_access_compressed_ifstream.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/random_access_compressed_ifstream.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/MSIHandler.cpp + dos2unix ./pwiz/utility/misc/MSIHandler.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/MSIHandler.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/IterationListener.hpp + dos2unix ./pwiz/utility/misc/IterationListener.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/IterationListener.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/TabReaderTest.cpp + dos2unix ./pwiz/utility/misc/TabReaderTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/TabReaderTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Singleton.hpp + dos2unix ./pwiz/utility/misc/Singleton.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Singleton.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/mru_list.hpp + dos2unix ./pwiz/utility/misc/mru_list.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/mru_list.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/IntegerSetTest.cpp + dos2unix ./pwiz/utility/misc/IntegerSetTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/IntegerSetTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/DateTimeTest.cpp + dos2unix ./pwiz/utility/misc/DateTimeTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/DateTimeTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/Timer.hpp + dos2unix ./pwiz/utility/misc/Timer.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/Timer.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/SHA1_ostream_test.cpp + dos2unix ./pwiz/utility/misc/SHA1_ostream_test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/SHA1_ostream_test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/misc/virtual_map.hpp + dos2unix ./pwiz/utility/misc/virtual_map.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/misc/virtual_map.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/IsotopeTableTest.cpp + dos2unix ./pwiz/utility/chemistry/IsotopeTableTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/IsotopeTableTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/ChemistryData.cpp + dos2unix ./pwiz/utility/chemistry/ChemistryData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/ChemistryData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/IsotopeCalculator.hpp + dos2unix ./pwiz/utility/chemistry/IsotopeCalculator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/IsotopeCalculator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/ChemistryTest.cpp + dos2unix ./pwiz/utility/chemistry/ChemistryTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/ChemistryTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/Chemistry.cpp + dos2unix ./pwiz/utility/chemistry/Chemistry.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/Chemistry.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/IsotopeTable.hpp + dos2unix ./pwiz/utility/chemistry/IsotopeTable.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/IsotopeTable.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/IsotopeCalculator.cpp + dos2unix ./pwiz/utility/chemistry/IsotopeCalculator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/IsotopeCalculator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/IsotopeCalculatorTest.cpp + dos2unix ./pwiz/utility/chemistry/IsotopeCalculatorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/IsotopeCalculatorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp + dos2unix ./pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/ChemistryData.hpp + dos2unix ./pwiz/utility/chemistry/ChemistryData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/ChemistryData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/MZToleranceTest.cpp + dos2unix ./pwiz/utility/chemistry/MZToleranceTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/MZToleranceTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/Chemistry.hpp + dos2unix ./pwiz/utility/chemistry/Chemistry.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/Chemistry.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/MZTolerance.cpp + dos2unix ./pwiz/utility/chemistry/MZTolerance.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/MZTolerance.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/iso.cpp + dos2unix ./pwiz/utility/chemistry/iso.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/iso.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/IsotopeEnvelopeEstimator.cpp + dos2unix ./pwiz/utility/chemistry/IsotopeEnvelopeEstimator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/IsotopeEnvelopeEstimator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/MZTolerance.hpp + dos2unix ./pwiz/utility/chemistry/MZTolerance.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/MZTolerance.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/IsotopeTable.cpp + dos2unix ./pwiz/utility/chemistry/IsotopeTable.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/IsotopeTable.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/IsotopeEnvelopeEstimatorTest.cpp + dos2unix ./pwiz/utility/chemistry/IsotopeEnvelopeEstimatorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/IsotopeEnvelopeEstimatorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/parse_isotopes.cpp + dos2unix ./pwiz/utility/chemistry/parse_isotopes.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/parse_isotopes.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/chemistry/Ion.hpp + dos2unix ./pwiz/utility/chemistry/Ion.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/chemistry/Ion.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/ms/simplepickertest.cpp + dos2unix ./pwiz/utility/findmf/base/ms/simplepickertest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/ms/simplepickertest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/ms/peakpickerqtof.hpp + dos2unix ./pwiz/utility/findmf/base/ms/peakpickerqtof.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/ms/peakpickerqtof.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/ms/simplepicker.hpp + dos2unix ./pwiz/utility/findmf/base/ms/simplepicker.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/ms/simplepicker.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/filter/filter.hpp + dos2unix ./pwiz/utility/findmf/base/filter/filter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/filter/filter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/filter/utilities/preparedata.hpp + dos2unix ./pwiz/utility/findmf/base/filter/utilities/preparedata.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/filter/utilities/preparedata.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/filter/utilities/mexhat.hpp + dos2unix ./pwiz/utility/findmf/base/filter/utilities/mexhat.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/filter/utilities/mexhat.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/filter/utilities/gauss.hpp + dos2unix ./pwiz/utility/findmf/base/filter/utilities/gauss.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/filter/utilities/gauss.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/filter/filterutilstest.cpp + dos2unix ./pwiz/utility/findmf/base/filter/filterutilstest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/filter/filterutilstest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/filter/gaussfiltertest.cpp + dos2unix ./pwiz/utility/findmf/base/filter/gaussfiltertest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/filter/gaussfiltertest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/filter/gaussfilter.hpp + dos2unix ./pwiz/utility/findmf/base/filter/gaussfilter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/filter/gaussfilter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/cumsum.hpp + dos2unix ./pwiz/utility/findmf/base/base/cumsum.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/cumsum.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/utilities/interpolation.hpp + dos2unix ./pwiz/utility/findmf/base/base/utilities/interpolation.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/utilities/interpolation.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/utilities/base.hpp + dos2unix ./pwiz/utility/findmf/base/base/utilities/base.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/utilities/base.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/scale.hpp + dos2unix ./pwiz/utility/findmf/base/base/scale.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/scale.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/diff.hpp + dos2unix ./pwiz/utility/findmf/base/base/diff.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/diff.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/cumsumtest.cpp + dos2unix ./pwiz/utility/findmf/base/base/cumsumtest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/cumsumtest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/constants.hpp + dos2unix ./pwiz/utility/findmf/base/base/constants.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/constants.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/difftest.cpp + dos2unix ./pwiz/utility/findmf/base/base/difftest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/difftest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/copyif.hpp + dos2unix ./pwiz/utility/findmf/base/base/copyif.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/copyif.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/basetest.cpp + dos2unix ./pwiz/utility/findmf/base/base/basetest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/basetest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/copy_iftest.cpp + dos2unix ./pwiz/utility/findmf/base/base/copy_iftest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/copy_iftest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/interpolate.hpp + dos2unix ./pwiz/utility/findmf/base/base/interpolate.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/interpolate.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/equispaceinterpolationtest.cpp + dos2unix ./pwiz/utility/findmf/base/base/equispaceinterpolationtest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/equispaceinterpolationtest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/base/base.hpp + dos2unix ./pwiz/utility/findmf/base/base/base.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/base/base.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/bucket1dtest.cpp + dos2unix ./pwiz/utility/findmf/base/resample/bucket1dtest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/bucket1dtest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp + dos2unix ./pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/determinebinwidth.hpp + dos2unix ./pwiz/utility/findmf/base/resample/determinebinwidth.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/determinebinwidth.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/convert2dense.hpp + dos2unix ./pwiz/utility/findmf/base/resample/convert2dense.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/convert2dense.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/determinbinwithtest.cpp + dos2unix ./pwiz/utility/findmf/base/resample/determinbinwithtest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/determinbinwithtest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/bin1d.hpp + dos2unix ./pwiz/utility/findmf/base/resample/bin1d.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/bin1d.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/masscomparefunctors.hpp + dos2unix ./pwiz/utility/findmf/base/resample/masscomparefunctors.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/masscomparefunctors.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/bucket1d.hpp + dos2unix ./pwiz/utility/findmf/base/resample/bucket1d.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/bucket1d.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/breakspec.hpp + dos2unix ./pwiz/utility/findmf/base/resample/breakspec.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/breakspec.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/findmf/base/resample/convert2densetest.cpp + dos2unix ./pwiz/utility/findmf/base/resample/convert2densetest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/findmf/base/resample/convert2densetest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/HouseholderQR.hpp + dos2unix ./pwiz/utility/math/HouseholderQR.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/HouseholderQR.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/Parabola.hpp + dos2unix ./pwiz/utility/math/Parabola.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/Parabola.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/Parabola.cpp + dos2unix ./pwiz/utility/math/Parabola.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/Parabola.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/StatsTest.cpp + dos2unix ./pwiz/utility/math/StatsTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/StatsTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/erfTest.cpp + dos2unix ./pwiz/utility/math/erfTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/erfTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/LinearLeastSquaresTest.cpp + dos2unix ./pwiz/utility/math/LinearLeastSquaresTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/LinearLeastSquaresTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/HouseholderQRTest.cpp + dos2unix ./pwiz/utility/math/HouseholderQRTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/HouseholderQRTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/Stats.cpp + dos2unix ./pwiz/utility/math/Stats.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/Stats.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/OrderedPairTest.cpp + dos2unix ./pwiz/utility/math/OrderedPairTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/OrderedPairTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/erf.hpp + dos2unix ./pwiz/utility/math/erf.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/erf.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/erf.cpp + dos2unix ./pwiz/utility/math/erf.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/erf.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/LinearLeastSquares.hpp + dos2unix ./pwiz/utility/math/LinearLeastSquares.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/LinearLeastSquares.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/OrderedPair.hpp + dos2unix ./pwiz/utility/math/OrderedPair.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/OrderedPair.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/ParabolaTest.cpp + dos2unix ./pwiz/utility/math/ParabolaTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/ParabolaTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/Types.hpp + dos2unix ./pwiz/utility/math/Types.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/Types.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/qrTest.cpp + dos2unix ./pwiz/utility/math/qrTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/qrTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/round.hpp + dos2unix ./pwiz/utility/math/round.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/round.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/MatchedFilterTest.cpp + dos2unix ./pwiz/utility/math/MatchedFilterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/MatchedFilterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/MatchedFilter.hpp + dos2unix ./pwiz/utility/math/MatchedFilter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/MatchedFilter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/LinearSolverTest.cpp + dos2unix ./pwiz/utility/math/LinearSolverTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/LinearSolverTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/Stats.hpp + dos2unix ./pwiz/utility/math/Stats.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/Stats.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/MatrixInverse.hpp + dos2unix ./pwiz/utility/math/MatrixInverse.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/MatrixInverse.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/LinearSolver.hpp + dos2unix ./pwiz/utility/math/LinearSolver.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/LinearSolver.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/math/qr.hpp + dos2unix ./pwiz/utility/math/qr.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/math/qr.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/minimxml/SAXParserTest.cpp + dos2unix ./pwiz/utility/minimxml/SAXParserTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/minimxml/SAXParserTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/minimxml/XMLWriter.hpp + dos2unix ./pwiz/utility/minimxml/XMLWriter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/minimxml/XMLWriter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/minimxml/SAXParser.hpp + dos2unix ./pwiz/utility/minimxml/SAXParser.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/minimxml/SAXParser.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/minimxml/SAXParser.cpp + dos2unix ./pwiz/utility/minimxml/SAXParser.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/minimxml/SAXParser.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/minimxml/XMLWriterTest.cpp + dos2unix ./pwiz/utility/minimxml/XMLWriterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/minimxml/XMLWriterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/minimxml/XMLWriter.cpp + dos2unix ./pwiz/utility/minimxml/XMLWriter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/minimxml/XMLWriter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/proteome/IPIFASTADatabase.hpp + dos2unix ./pwiz/utility/proteome/IPIFASTADatabase.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/proteome/IPIFASTADatabase.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/proteome/IPIFASTADatabase.cpp + dos2unix ./pwiz/utility/proteome/IPIFASTADatabase.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/proteome/IPIFASTADatabase.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/proteome/pepdb.cpp + dos2unix ./pwiz/utility/proteome/pepdb.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/proteome/pepdb.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/utility/proteome/IPIFASTADatabaseTest.cpp + dos2unix ./pwiz/utility/proteome/IPIFASTADatabaseTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/utility/proteome/IPIFASTADatabaseTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/IO.cpp + dos2unix ./pwiz/data/identdata/IO.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/IO.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/ExtendedReadTest.cpp + dos2unix ./pwiz/data/identdata/ExtendedReadTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/ExtendedReadTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Reader.cpp + dos2unix ./pwiz/data/identdata/Reader.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Reader.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/DefaultReaderList.cpp + dos2unix ./pwiz/data/identdata/DefaultReaderList.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/DefaultReaderList.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/DelimWriter.hpp + dos2unix ./pwiz/data/identdata/DelimWriter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/DelimWriter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Diff.cpp + dos2unix ./pwiz/data/identdata/Diff.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Diff.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_Text_Test.cpp + dos2unix ./pwiz/data/identdata/Serializer_Text_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_Text_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/DelimWriter.cpp + dos2unix ./pwiz/data/identdata/DelimWriter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/DelimWriter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/IdentData.cpp + dos2unix ./pwiz/data/identdata/IdentData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/IdentData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/References.cpp + dos2unix ./pwiz/data/identdata/References.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/References.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/DiffTest.cpp + dos2unix ./pwiz/data/identdata/DiffTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/DiffTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/IO.hpp + dos2unix ./pwiz/data/identdata/IO.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/IO.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Pep2MzIdent.cpp + dos2unix ./pwiz/data/identdata/Pep2MzIdent.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Pep2MzIdent.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_protXML.hpp + dos2unix ./pwiz/data/identdata/Serializer_protXML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_protXML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/KwCVMap.cpp + dos2unix ./pwiz/data/identdata/KwCVMap.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/KwCVMap.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/ReferencesTest.cpp + dos2unix ./pwiz/data/identdata/ReferencesTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/ReferencesTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/MascotReader.hpp + dos2unix ./pwiz/data/identdata/MascotReader.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/MascotReader.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Pep2MzIdentTest.cpp + dos2unix ./pwiz/data/identdata/Pep2MzIdentTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Pep2MzIdentTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/MzidPredicates.hpp + dos2unix ./pwiz/data/identdata/MzidPredicates.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/MzidPredicates.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/DelimReader.cpp + dos2unix ./pwiz/data/identdata/DelimReader.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/DelimReader.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_protXML_Test.cpp + dos2unix ./pwiz/data/identdata/Serializer_protXML_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_protXML_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/IdentData.hpp + dos2unix ./pwiz/data/identdata/IdentData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/IdentData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/DefaultReaderList.hpp + dos2unix ./pwiz/data/identdata/DefaultReaderList.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/DefaultReaderList.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Pep2MzIdent.hpp + dos2unix ./pwiz/data/identdata/Pep2MzIdent.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Pep2MzIdent.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/KwCVMap.hpp + dos2unix ./pwiz/data/identdata/KwCVMap.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/KwCVMap.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/DelimReader.hpp + dos2unix ./pwiz/data/identdata/DelimReader.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/DelimReader.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_Text.hpp + dos2unix ./pwiz/data/identdata/Serializer_Text.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_Text.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/IdentDataTest.cpp + dos2unix ./pwiz/data/identdata/IdentDataTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/IdentDataTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_pepXML_Test.cpp + dos2unix ./pwiz/data/identdata/Serializer_pepXML_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_pepXML_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/IdentDataFile.cpp + dos2unix ./pwiz/data/identdata/IdentDataFile.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/IdentDataFile.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Version.hpp + dos2unix ./pwiz/data/identdata/Version.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Version.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_mzid.hpp + dos2unix ./pwiz/data/identdata/Serializer_mzid.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_mzid.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/TextWriter.hpp + dos2unix ./pwiz/data/identdata/TextWriter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/TextWriter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/examples.cpp + dos2unix ./pwiz/data/identdata/examples.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/examples.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Reader.hpp + dos2unix ./pwiz/data/identdata/Reader.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Reader.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/ReaderTest.cpp + dos2unix ./pwiz/data/identdata/ReaderTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/ReaderTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_protXML.cpp + dos2unix ./pwiz/data/identdata/Serializer_protXML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_protXML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_Text.cpp + dos2unix ./pwiz/data/identdata/Serializer_Text.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_Text.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Version.cpp + dos2unix ./pwiz/data/identdata/Version.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Version.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/examples.hpp + dos2unix ./pwiz/data/identdata/examples.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/examples.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/IOTest.cpp + dos2unix ./pwiz/data/identdata/IOTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/IOTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/IdentDataFile.hpp + dos2unix ./pwiz/data/identdata/IdentDataFile.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/IdentDataFile.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_mzid_Test.cpp + dos2unix ./pwiz/data/identdata/Serializer_mzid_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_mzid_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_pepXML.hpp + dos2unix ./pwiz/data/identdata/Serializer_pepXML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_pepXML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/KwCVMapTest.cpp + dos2unix ./pwiz/data/identdata/KwCVMapTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/KwCVMapTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/References.hpp + dos2unix ./pwiz/data/identdata/References.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/References.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Diff.hpp + dos2unix ./pwiz/data/identdata/Diff.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Diff.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_mzid.cpp + dos2unix ./pwiz/data/identdata/Serializer_mzid.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_mzid.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/identdata/Serializer_pepXML.cpp + dos2unix ./pwiz/data/identdata/Serializer_pepXML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/identdata/Serializer_pepXML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSData.cpp + dos2unix ./pwiz/data/msdata/MSData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumIterator.cpp + dos2unix ./pwiz/data/msdata/SpectrumIterator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumIterator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/IO.cpp + dos2unix ./pwiz/data/msdata/IO.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/IO.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_mzML.hpp + dos2unix ./pwiz/data/msdata/Serializer_mzML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_mzML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Reader.cpp + dos2unix ./pwiz/data/msdata/Reader.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Reader.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/DefaultReaderList.cpp + dos2unix ./pwiz/data/msdata/DefaultReaderList.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/DefaultReaderList.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_MSn_Test.cpp + dos2unix ./pwiz/data/msdata/SpectrumList_MSn_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_MSn_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumListCacheTest.cpp + dos2unix ./pwiz/data/msdata/SpectrumListCacheTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumListCacheTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumListBaseTest.cpp + dos2unix ./pwiz/data/msdata/SpectrumListBaseTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumListBaseTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSDataMerger.cpp + dos2unix ./pwiz/data/msdata/MSDataMerger.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSDataMerger.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Diff.cpp + dos2unix ./pwiz/data/msdata/Diff.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Diff.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/ChromatogramListBase.hpp + dos2unix ./pwiz/data/msdata/ChromatogramListBase.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/ChromatogramListBase.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumListBase.hpp + dos2unix ./pwiz/data/msdata/SpectrumListBase.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumListBase.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_MGF.cpp + dos2unix ./pwiz/data/msdata/Serializer_MGF.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_MGF.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_mzXML.hpp + dos2unix ./pwiz/data/msdata/Serializer_mzXML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_mzXML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumWorkerThreads.hpp + dos2unix ./pwiz/data/msdata/SpectrumWorkerThreads.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumWorkerThreads.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_BTDX.cpp + dos2unix ./pwiz/data/msdata/SpectrumList_BTDX.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_BTDX.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/References.cpp + dos2unix ./pwiz/data/msdata/References.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/References.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_mzXML_Test.cpp + dos2unix ./pwiz/data/msdata/SpectrumList_mzXML_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_mzXML_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/DiffTest.cpp + dos2unix ./pwiz/data/msdata/DiffTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/DiffTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/IO.hpp + dos2unix ./pwiz/data/msdata/IO.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/IO.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSnReaderTest.cpp + dos2unix ./pwiz/data/msdata/MSnReaderTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSnReaderTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_mzXML.cpp + dos2unix ./pwiz/data/msdata/SpectrumList_mzXML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_mzXML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/ReferencesTest.cpp + dos2unix ./pwiz/data/msdata/ReferencesTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/ReferencesTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSDataTest.cpp + dos2unix ./pwiz/data/msdata/MSDataTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSDataTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSDataMerger.hpp + dos2unix ./pwiz/data/msdata/MSDataMerger.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSDataMerger.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_MGF_Test.cpp + dos2unix ./pwiz/data/msdata/Serializer_MGF_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_MGF_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumInfo.cpp + dos2unix ./pwiz/data/msdata/SpectrumInfo.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumInfo.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_mzXML.hpp + dos2unix ./pwiz/data/msdata/SpectrumList_mzXML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_mzXML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/ChromatogramList_mzML.hpp + dos2unix ./pwiz/data/msdata/ChromatogramList_mzML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/ChromatogramList_mzML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Index_mzML.cpp + dos2unix ./pwiz/data/msdata/Index_mzML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Index_mzML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSData.hpp + dos2unix ./pwiz/data/msdata/MSData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSDataMergerTest.cpp + dos2unix ./pwiz/data/msdata/MSDataMergerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSDataMergerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/BinaryDataEncoder.cpp + dos2unix ./pwiz/data/msdata/BinaryDataEncoder.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/BinaryDataEncoder.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/DefaultReaderList.hpp + dos2unix ./pwiz/data/msdata/DefaultReaderList.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/DefaultReaderList.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_MSn.cpp + dos2unix ./pwiz/data/msdata/Serializer_MSn.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_MSn.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/BinaryDataEncoderTest.cpp + dos2unix ./pwiz/data/msdata/BinaryDataEncoderTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/BinaryDataEncoderTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_mzML.hpp + dos2unix ./pwiz/data/msdata/SpectrumList_mzML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_mzML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumListWrapper.hpp + dos2unix ./pwiz/data/msdata/SpectrumListWrapper.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumListWrapper.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_MGF.hpp + dos2unix ./pwiz/data/msdata/SpectrumList_MGF.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_MGF.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSDataFileTest.cpp + dos2unix ./pwiz/data/msdata/MSDataFileTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSDataFileTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumListCache.cpp + dos2unix ./pwiz/data/msdata/SpectrumListCache.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumListCache.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_mzML.cpp + dos2unix ./pwiz/data/msdata/Serializer_mzML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_mzML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Version.hpp + dos2unix ./pwiz/data/msdata/Version.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Version.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSNumpress.cpp + dos2unix ./pwiz/data/msdata/MSNumpress.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSNumpress.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/ChromatogramList_mzML.cpp + dos2unix ./pwiz/data/msdata/ChromatogramList_mzML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/ChromatogramList_mzML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/TextWriter.hpp + dos2unix ./pwiz/data/msdata/TextWriter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/TextWriter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/examples.cpp + dos2unix ./pwiz/data/msdata/examples.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/examples.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Reader.hpp + dos2unix ./pwiz/data/msdata/Reader.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Reader.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_mzML_Test.cpp + dos2unix ./pwiz/data/msdata/SpectrumList_mzML_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_mzML_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_MSn.hpp + dos2unix ./pwiz/data/msdata/SpectrumList_MSn.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_MSn.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/ReaderTest.cpp + dos2unix ./pwiz/data/msdata/ReaderTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/ReaderTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumInfo.hpp + dos2unix ./pwiz/data/msdata/SpectrumInfo.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumInfo.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/ChromatogramList_mzML_Test.cpp + dos2unix ./pwiz/data/msdata/ChromatogramList_mzML_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/ChromatogramList_mzML_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SHA1OutputObserver.hpp + dos2unix ./pwiz/data/msdata/SHA1OutputObserver.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SHA1OutputObserver.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Index_mzML.hpp + dos2unix ./pwiz/data/msdata/Index_mzML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Index_mzML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_mzML_Test.cpp + dos2unix ./pwiz/data/msdata/Serializer_mzML_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_mzML_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_BTDX.hpp + dos2unix ./pwiz/data/msdata/SpectrumList_BTDX.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_BTDX.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Version.cpp + dos2unix ./pwiz/data/msdata/Version.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Version.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/examples.hpp + dos2unix ./pwiz/data/msdata/examples.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/examples.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_MGF_Test.cpp + dos2unix ./pwiz/data/msdata/SpectrumList_MGF_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_MGF_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSDataFile.hpp + dos2unix ./pwiz/data/msdata/MSDataFile.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSDataFile.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_mzML.cpp + dos2unix ./pwiz/data/msdata/SpectrumList_mzML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_mzML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/IOTest.cpp + dos2unix ./pwiz/data/msdata/IOTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/IOTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/BinaryDataEncoder.hpp + dos2unix ./pwiz/data/msdata/BinaryDataEncoder.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/BinaryDataEncoder.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/ChromatogramListBaseTest.cpp + dos2unix ./pwiz/data/msdata/ChromatogramListBaseTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/ChromatogramListBaseTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_MGF.hpp + dos2unix ./pwiz/data/msdata/Serializer_MGF.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_MGF.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MemoryMRUCache.hpp + dos2unix ./pwiz/data/msdata/MemoryMRUCache.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MemoryMRUCache.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/LegacyAdapterTest.cpp + dos2unix ./pwiz/data/msdata/LegacyAdapterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/LegacyAdapterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumWorkerThreads.cpp + dos2unix ./pwiz/data/msdata/SpectrumWorkerThreads.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumWorkerThreads.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumInfoTest.cpp + dos2unix ./pwiz/data/msdata/SpectrumInfoTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumInfoTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_mzXML_Test.cpp + dos2unix ./pwiz/data/msdata/Serializer_mzXML_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_mzXML_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_MSn_Test.cpp + dos2unix ./pwiz/data/msdata/Serializer_MSn_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_MSn_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_MSn.cpp + dos2unix ./pwiz/data/msdata/SpectrumList_MSn.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_MSn.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/LegacyAdapter.hpp + dos2unix ./pwiz/data/msdata/LegacyAdapter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/LegacyAdapter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/LegacyAdapter.cpp + dos2unix ./pwiz/data/msdata/LegacyAdapter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/LegacyAdapter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_MSn.hpp + dos2unix ./pwiz/data/msdata/Serializer_MSn.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_MSn.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Serializer_mzXML.cpp + dos2unix ./pwiz/data/msdata/Serializer_mzXML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Serializer_mzXML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSNumpress.hpp + dos2unix ./pwiz/data/msdata/MSNumpress.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSNumpress.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/References.hpp + dos2unix ./pwiz/data/msdata/References.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/References.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/Diff.hpp + dos2unix ./pwiz/data/msdata/Diff.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/Diff.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumListCache.hpp + dos2unix ./pwiz/data/msdata/SpectrumListCache.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumListCache.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumList_MGF.cpp + dos2unix ./pwiz/data/msdata/SpectrumList_MGF.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumList_MGF.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumIteratorTest.cpp + dos2unix ./pwiz/data/msdata/SpectrumIteratorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumIteratorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/MSDataFile.cpp + dos2unix ./pwiz/data/msdata/MSDataFile.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/MSDataFile.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumIterator.hpp + dos2unix ./pwiz/data/msdata/SpectrumIterator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumIterator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/msdata/SpectrumListWrapperTest.cpp + dos2unix ./pwiz/data/msdata/SpectrumListWrapperTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/msdata/SpectrumListWrapperTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/IO.cpp + dos2unix ./pwiz/data/tradata/IO.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/IO.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/Reader.cpp + dos2unix ./pwiz/data/tradata/Reader.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/Reader.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/TraDataFile.hpp + dos2unix ./pwiz/data/tradata/TraDataFile.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/TraDataFile.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/DefaultReaderList.cpp + dos2unix ./pwiz/data/tradata/DefaultReaderList.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/DefaultReaderList.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/TraDataFile.cpp + dos2unix ./pwiz/data/tradata/TraDataFile.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/TraDataFile.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/Diff.cpp + dos2unix ./pwiz/data/tradata/Diff.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/Diff.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/References.cpp + dos2unix ./pwiz/data/tradata/References.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/References.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/DiffTest.cpp + dos2unix ./pwiz/data/tradata/DiffTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/DiffTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/IO.hpp + dos2unix ./pwiz/data/tradata/IO.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/IO.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/ReferencesTest.cpp + dos2unix ./pwiz/data/tradata/ReferencesTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/ReferencesTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/Serializer_traML_Test.cpp + dos2unix ./pwiz/data/tradata/Serializer_traML_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/Serializer_traML_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/DefaultReaderList.hpp + dos2unix ./pwiz/data/tradata/DefaultReaderList.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/DefaultReaderList.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/TraData.hpp + dos2unix ./pwiz/data/tradata/TraData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/TraData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/TraDataFileTest.cpp + dos2unix ./pwiz/data/tradata/TraDataFileTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/TraDataFileTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/Version.hpp + dos2unix ./pwiz/data/tradata/Version.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/Version.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/TextWriter.hpp + dos2unix ./pwiz/data/tradata/TextWriter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/TextWriter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/examples.cpp + dos2unix ./pwiz/data/tradata/examples.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/examples.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/Reader.hpp + dos2unix ./pwiz/data/tradata/Reader.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/Reader.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/ReaderTest.cpp + dos2unix ./pwiz/data/tradata/ReaderTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/ReaderTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/Serializer_traML.cpp + dos2unix ./pwiz/data/tradata/Serializer_traML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/Serializer_traML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/Version.cpp + dos2unix ./pwiz/data/tradata/Version.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/Version.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/examples.hpp + dos2unix ./pwiz/data/tradata/examples.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/examples.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/TraDataTest.cpp + dos2unix ./pwiz/data/tradata/TraDataTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/TraDataTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/IOTest.cpp + dos2unix ./pwiz/data/tradata/IOTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/IOTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/TraData.cpp + dos2unix ./pwiz/data/tradata/TraData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/TraData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/Serializer_traML.hpp + dos2unix ./pwiz/data/tradata/Serializer_traML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/Serializer_traML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/References.hpp + dos2unix ./pwiz/data/tradata/References.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/References.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/tradata/Diff.hpp + dos2unix ./pwiz/data/tradata/Diff.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/tradata/Diff.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/FrequencyData.cpp + dos2unix ./pwiz/data/misc/FrequencyData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/FrequencyData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/PeakData.hpp + dos2unix ./pwiz/data/misc/PeakData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/PeakData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/MinimumPepXMLTest.cpp + dos2unix ./pwiz/data/misc/MinimumPepXMLTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/MinimumPepXMLTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/MinimumPepXML.cpp + dos2unix ./pwiz/data/misc/MinimumPepXML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/MinimumPepXML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/SampleDatumTest.cpp + dos2unix ./pwiz/data/misc/SampleDatumTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/SampleDatumTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/SampleDatum.hpp + dos2unix ./pwiz/data/misc/SampleDatum.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/SampleDatum.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/FrequencyData.hpp + dos2unix ./pwiz/data/misc/FrequencyData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/FrequencyData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/CalibrationParametersTest.cpp + dos2unix ./pwiz/data/misc/CalibrationParametersTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/CalibrationParametersTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/CalibrationParameters.hpp + dos2unix ./pwiz/data/misc/CalibrationParameters.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/CalibrationParameters.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/FrequencyDataTestData.hpp + dos2unix ./pwiz/data/misc/FrequencyDataTestData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/FrequencyDataTestData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/PeakData.cpp + dos2unix ./pwiz/data/misc/PeakData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/PeakData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/MinimumPepXML.hpp + dos2unix ./pwiz/data/misc/MinimumPepXML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/MinimumPepXML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/FrequencyDataTest.cpp + dos2unix ./pwiz/data/misc/FrequencyDataTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/FrequencyDataTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/PeakDataTest.cpp + dos2unix ./pwiz/data/misc/PeakDataTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/PeakDataTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/misc/FrequencyDataTestData.cpp + dos2unix ./pwiz/data/misc/FrequencyDataTestData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/misc/FrequencyDataTestData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/ParamTypes.hpp + dos2unix ./pwiz/data/common/ParamTypes.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/ParamTypes.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/cv.cpp + dos2unix ./pwiz/data/common/cv.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/cv.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/MemoryIndex.cpp + dos2unix ./pwiz/data/common/MemoryIndex.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/MemoryIndex.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/Unimod.hpp + dos2unix ./pwiz/data/common/Unimod.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/Unimod.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/ParamTypes.cpp + dos2unix ./pwiz/data/common/ParamTypes.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/ParamTypes.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/cv.hpp + dos2unix ./pwiz/data/common/cv.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/cv.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/BinaryIndexStream.cpp + dos2unix ./pwiz/data/common/BinaryIndexStream.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/BinaryIndexStream.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/CVTranslatorTest.cpp + dos2unix ./pwiz/data/common/CVTranslatorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/CVTranslatorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/ParamTypesTest.cpp + dos2unix ./pwiz/data/common/ParamTypesTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/ParamTypesTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/diff_std.hpp + dos2unix ./pwiz/data/common/diff_std.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/diff_std.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/CVTranslator.hpp + dos2unix ./pwiz/data/common/CVTranslator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/CVTranslator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/UnimodTest.cpp + dos2unix ./pwiz/data/common/UnimodTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/UnimodTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/MemoryIndexTest.cpp + dos2unix ./pwiz/data/common/MemoryIndexTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/MemoryIndexTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/cvgen.cpp + dos2unix ./pwiz/data/common/cvgen.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/cvgen.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/diff_std.cpp + dos2unix ./pwiz/data/common/diff_std.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/diff_std.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/obo.hpp + dos2unix ./pwiz/data/common/obo.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/obo.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/CVTranslator.cpp + dos2unix ./pwiz/data/common/CVTranslator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/CVTranslator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/MemoryIndex.hpp + dos2unix ./pwiz/data/common/MemoryIndex.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/MemoryIndex.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/obo.cpp + dos2unix ./pwiz/data/common/obo.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/obo.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/diff_std_test.cpp + dos2unix ./pwiz/data/common/diff_std_test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/diff_std_test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/Unimod.cpp + dos2unix ./pwiz/data/common/Unimod.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/Unimod.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/Index.hpp + dos2unix ./pwiz/data/common/Index.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/Index.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/BinaryIndexStreamTest.cpp + dos2unix ./pwiz/data/common/BinaryIndexStreamTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/BinaryIndexStreamTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/obotest.cpp + dos2unix ./pwiz/data/common/obotest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/obotest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/cvtest.cpp + dos2unix ./pwiz/data/common/cvtest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/cvtest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/common/BinaryIndexStream.hpp + dos2unix ./pwiz/data/common/BinaryIndexStream.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/common/BinaryIndexStream.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/ChromatogramList_ABI.hpp + dos2unix ./pwiz/data/vendor_readers/ABI/ChromatogramList_ABI.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/ChromatogramList_ABI.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/T2D/SpectrumList_ABI_T2D.cpp + dos2unix ./pwiz/data/vendor_readers/ABI/T2D/SpectrumList_ABI_T2D.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/T2D/SpectrumList_ABI_T2D.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D.cpp + dos2unix ./pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D_Test.cpp + dos2unix ./pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D.hpp + dos2unix ./pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/T2D/Reader_ABI_T2D.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/T2D/SpectrumList_ABI_T2D.hpp + dos2unix ./pwiz/data/vendor_readers/ABI/T2D/SpectrumList_ABI_T2D.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/T2D/SpectrumList_ABI_T2D.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/ChromatogramList_ABI.cpp + dos2unix ./pwiz/data/vendor_readers/ABI/ChromatogramList_ABI.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/ChromatogramList_ABI.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/Reader_ABI_Detail.cpp + dos2unix ./pwiz/data/vendor_readers/ABI/Reader_ABI_Detail.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/Reader_ABI_Detail.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/SpectrumList_ABI.hpp + dos2unix ./pwiz/data/vendor_readers/ABI/SpectrumList_ABI.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/SpectrumList_ABI.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/SpectrumList_ABI.cpp + dos2unix ./pwiz/data/vendor_readers/ABI/SpectrumList_ABI.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/SpectrumList_ABI.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/Reader_ABI_Detail.hpp + dos2unix ./pwiz/data/vendor_readers/ABI/Reader_ABI_Detail.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/Reader_ABI_Detail.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/Reader_ABI.cpp + dos2unix ./pwiz/data/vendor_readers/ABI/Reader_ABI.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/Reader_ABI.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/Reader_ABI_Test.cpp + dos2unix ./pwiz/data/vendor_readers/ABI/Reader_ABI_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/Reader_ABI_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ABI/Reader_ABI.hpp + dos2unix ./pwiz/data/vendor_readers/ABI/Reader_ABI.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ABI/Reader_ABI.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Agilent/SpectrumList_Agilent.cpp + dos2unix ./pwiz/data/vendor_readers/Agilent/SpectrumList_Agilent.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Agilent/SpectrumList_Agilent.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Agilent/Reader_Agilent_Test.cpp + dos2unix ./pwiz/data/vendor_readers/Agilent/Reader_Agilent_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Agilent/Reader_Agilent_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Agilent/SpectrumList_Agilent.hpp + dos2unix ./pwiz/data/vendor_readers/Agilent/SpectrumList_Agilent.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Agilent/SpectrumList_Agilent.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Agilent/ChromatogramList_Agilent.hpp + dos2unix ./pwiz/data/vendor_readers/Agilent/ChromatogramList_Agilent.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Agilent/ChromatogramList_Agilent.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Agilent/ChromatogramList_Agilent.cpp + dos2unix ./pwiz/data/vendor_readers/Agilent/ChromatogramList_Agilent.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Agilent/ChromatogramList_Agilent.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Agilent/Reader_Agilent.cpp + dos2unix ./pwiz/data/vendor_readers/Agilent/Reader_Agilent.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Agilent/Reader_Agilent.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Agilent/Reader_Agilent.hpp + dos2unix ./pwiz/data/vendor_readers/Agilent/Reader_Agilent.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Agilent/Reader_Agilent.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Bruker/ChromatogramList_Bruker.cpp + dos2unix ./pwiz/data/vendor_readers/Bruker/ChromatogramList_Bruker.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Bruker/ChromatogramList_Bruker.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Bruker/Reader_Bruker_Detail.hpp + dos2unix ./pwiz/data/vendor_readers/Bruker/Reader_Bruker_Detail.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Bruker/Reader_Bruker_Detail.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Bruker/Reader_Bruker.hpp + dos2unix ./pwiz/data/vendor_readers/Bruker/Reader_Bruker.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Bruker/Reader_Bruker.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Bruker/SpectrumList_Bruker.hpp + dos2unix ./pwiz/data/vendor_readers/Bruker/SpectrumList_Bruker.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Bruker/SpectrumList_Bruker.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Bruker/Reader_Bruker_Detail.cpp + dos2unix ./pwiz/data/vendor_readers/Bruker/Reader_Bruker_Detail.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Bruker/Reader_Bruker_Detail.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Bruker/Reader_Bruker.cpp + dos2unix ./pwiz/data/vendor_readers/Bruker/Reader_Bruker.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Bruker/Reader_Bruker.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Bruker/Reader_Bruker_Test.cpp + dos2unix ./pwiz/data/vendor_readers/Bruker/Reader_Bruker_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Bruker/Reader_Bruker_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Bruker/ChromatogramList_Bruker.hpp + dos2unix ./pwiz/data/vendor_readers/Bruker/ChromatogramList_Bruker.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Bruker/ChromatogramList_Bruker.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Bruker/SpectrumList_Bruker.cpp + dos2unix ./pwiz/data/vendor_readers/Bruker/SpectrumList_Bruker.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Bruker/SpectrumList_Bruker.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Shimadzu/Reader_Shimadzu.cpp + dos2unix ./pwiz/data/vendor_readers/Shimadzu/Reader_Shimadzu.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Shimadzu/Reader_Shimadzu.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Shimadzu/ChromatogramList_Shimadzu.hpp + dos2unix ./pwiz/data/vendor_readers/Shimadzu/ChromatogramList_Shimadzu.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Shimadzu/ChromatogramList_Shimadzu.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Shimadzu/ChromatogramList_Shimadzu.cpp + dos2unix ./pwiz/data/vendor_readers/Shimadzu/ChromatogramList_Shimadzu.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Shimadzu/ChromatogramList_Shimadzu.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Shimadzu/Reader_Shimadzu.hpp + dos2unix ./pwiz/data/vendor_readers/Shimadzu/Reader_Shimadzu.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Shimadzu/Reader_Shimadzu.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ExtendedReaderList.cpp + dos2unix ./pwiz/data/vendor_readers/ExtendedReaderList.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ExtendedReaderList.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/UIMF/Reader_UIMF.hpp + dos2unix ./pwiz/data/vendor_readers/UIMF/Reader_UIMF.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/UIMF/Reader_UIMF.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/UIMF/SpectrumList_UIMF.hpp + dos2unix ./pwiz/data/vendor_readers/UIMF/SpectrumList_UIMF.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/UIMF/SpectrumList_UIMF.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/UIMF/Reader_UIMF.cpp + dos2unix ./pwiz/data/vendor_readers/UIMF/Reader_UIMF.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/UIMF/Reader_UIMF.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/UIMF/SpectrumList_UIMF.cpp + dos2unix ./pwiz/data/vendor_readers/UIMF/SpectrumList_UIMF.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/UIMF/SpectrumList_UIMF.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/ExtendedReaderList.hpp + dos2unix ./pwiz/data/vendor_readers/ExtendedReaderList.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/ExtendedReaderList.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Waters/ChromatogramList_Waters.cpp + dos2unix ./pwiz/data/vendor_readers/Waters/ChromatogramList_Waters.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Waters/ChromatogramList_Waters.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Waters/SpectrumList_Waters.cpp + dos2unix ./pwiz/data/vendor_readers/Waters/SpectrumList_Waters.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Waters/SpectrumList_Waters.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Waters/Reader_Waters_Detail.cpp + dos2unix ./pwiz/data/vendor_readers/Waters/Reader_Waters_Detail.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Waters/Reader_Waters_Detail.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Waters/Reader_Waters.hpp + dos2unix ./pwiz/data/vendor_readers/Waters/Reader_Waters.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Waters/Reader_Waters.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Waters/Reader_Waters_Detail.hpp + dos2unix ./pwiz/data/vendor_readers/Waters/Reader_Waters_Detail.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Waters/Reader_Waters_Detail.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Waters/ChromatogramList_Waters.hpp + dos2unix ./pwiz/data/vendor_readers/Waters/ChromatogramList_Waters.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Waters/ChromatogramList_Waters.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Waters/Reader_Waters_Test.cpp + dos2unix ./pwiz/data/vendor_readers/Waters/Reader_Waters_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Waters/Reader_Waters_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Waters/Reader_Waters.cpp + dos2unix ./pwiz/data/vendor_readers/Waters/Reader_Waters.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Waters/Reader_Waters.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Waters/SpectrumList_Waters.hpp + dos2unix ./pwiz/data/vendor_readers/Waters/SpectrumList_Waters.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Waters/SpectrumList_Waters.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Thermo/Reader_Thermo.cpp + dos2unix ./pwiz/data/vendor_readers/Thermo/Reader_Thermo.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Thermo/Reader_Thermo.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Thermo/SpectrumList_Thermo.cpp + dos2unix ./pwiz/data/vendor_readers/Thermo/SpectrumList_Thermo.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Thermo/SpectrumList_Thermo.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Thermo/Reader_Thermo.hpp + dos2unix ./pwiz/data/vendor_readers/Thermo/Reader_Thermo.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Thermo/Reader_Thermo.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Thermo/SpectrumList_Thermo.hpp + dos2unix ./pwiz/data/vendor_readers/Thermo/SpectrumList_Thermo.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Thermo/SpectrumList_Thermo.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Thermo/Reader_Thermo_Detail.hpp + dos2unix ./pwiz/data/vendor_readers/Thermo/Reader_Thermo_Detail.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Thermo/Reader_Thermo_Detail.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Thermo/Reader_Thermo_Test.cpp + dos2unix ./pwiz/data/vendor_readers/Thermo/Reader_Thermo_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Thermo/Reader_Thermo_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Thermo/Reader_Thermo_Detail.cpp + dos2unix ./pwiz/data/vendor_readers/Thermo/Reader_Thermo_Detail.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Thermo/Reader_Thermo_Detail.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Thermo/ChromatogramList_Thermo.cpp + dos2unix ./pwiz/data/vendor_readers/Thermo/ChromatogramList_Thermo.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Thermo/ChromatogramList_Thermo.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/vendor_readers/Thermo/ChromatogramList_Thermo.hpp + dos2unix ./pwiz/data/vendor_readers/Thermo/ChromatogramList_Thermo.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/vendor_readers/Thermo/ChromatogramList_Thermo.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteinListCacheTest.cpp + dos2unix ./pwiz/data/proteome/ProteinListCacheTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteinListCacheTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Reader.cpp + dos2unix ./pwiz/data/proteome/Reader.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Reader.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/AminoAcidTest.cpp + dos2unix ./pwiz/data/proteome/AminoAcidTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/AminoAcidTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteomeData.hpp + dos2unix ./pwiz/data/proteome/ProteomeData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteomeData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteinListCache.hpp + dos2unix ./pwiz/data/proteome/ProteinListCache.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteinListCache.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Digestion.hpp + dos2unix ./pwiz/data/proteome/Digestion.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Digestion.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/DefaultReaderList.cpp + dos2unix ./pwiz/data/proteome/DefaultReaderList.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/DefaultReaderList.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteinListWrapper.hpp + dos2unix ./pwiz/data/proteome/ProteinListWrapper.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteinListWrapper.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/DigestionTest.cpp + dos2unix ./pwiz/data/proteome/DigestionTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/DigestionTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Diff.cpp + dos2unix ./pwiz/data/proteome/Diff.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Diff.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Peptide.hpp + dos2unix ./pwiz/data/proteome/Peptide.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Peptide.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteinListCache.cpp + dos2unix ./pwiz/data/proteome/ProteinListCache.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteinListCache.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Digestion.cpp + dos2unix ./pwiz/data/proteome/Digestion.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Digestion.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/DiffTest.cpp + dos2unix ./pwiz/data/proteome/DiffTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/DiffTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Serializer_FASTA.cpp + dos2unix ./pwiz/data/proteome/Serializer_FASTA.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Serializer_FASTA.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteomeDataFileTest.cpp + dos2unix ./pwiz/data/proteome/ProteomeDataFileTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteomeDataFileTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/DefaultReaderList.hpp + dos2unix ./pwiz/data/proteome/DefaultReaderList.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/DefaultReaderList.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Modification.cpp + dos2unix ./pwiz/data/proteome/Modification.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Modification.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/AminoAcid.hpp + dos2unix ./pwiz/data/proteome/AminoAcid.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/AminoAcid.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Version.hpp + dos2unix ./pwiz/data/proteome/Version.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Version.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteomeDataFile.hpp + dos2unix ./pwiz/data/proteome/ProteomeDataFile.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteomeDataFile.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/TextWriter.hpp + dos2unix ./pwiz/data/proteome/TextWriter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/TextWriter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/examples.cpp + dos2unix ./pwiz/data/proteome/examples.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/examples.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Reader.hpp + dos2unix ./pwiz/data/proteome/Reader.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Reader.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ReaderTest.cpp + dos2unix ./pwiz/data/proteome/ReaderTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ReaderTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Serializer_FASTA.hpp + dos2unix ./pwiz/data/proteome/Serializer_FASTA.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Serializer_FASTA.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Version.cpp + dos2unix ./pwiz/data/proteome/Version.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Version.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/examples.hpp + dos2unix ./pwiz/data/proteome/examples.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/examples.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteomeDataFile.cpp + dos2unix ./pwiz/data/proteome/ProteomeDataFile.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteomeDataFile.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteinListWrapperTest.cpp + dos2unix ./pwiz/data/proteome/ProteinListWrapperTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteinListWrapperTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/PeptideTest.cpp + dos2unix ./pwiz/data/proteome/PeptideTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/PeptideTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteomeDataTest.cpp + dos2unix ./pwiz/data/proteome/ProteomeDataTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteomeDataTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Reader_FASTA.hpp + dos2unix ./pwiz/data/proteome/Reader_FASTA.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Reader_FASTA.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Serializer_FASTA_Test.cpp + dos2unix ./pwiz/data/proteome/Serializer_FASTA_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Serializer_FASTA_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Reader_FASTA.cpp + dos2unix ./pwiz/data/proteome/Reader_FASTA.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Reader_FASTA.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Peptide.cpp + dos2unix ./pwiz/data/proteome/Peptide.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Peptide.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Diff.hpp + dos2unix ./pwiz/data/proteome/Diff.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Diff.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/Modification.hpp + dos2unix ./pwiz/data/proteome/Modification.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/Modification.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/ProteomeData.cpp + dos2unix ./pwiz/data/proteome/ProteomeData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/ProteomeData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/data/proteome/AminoAcid.cpp + dos2unix ./pwiz/data/proteome/AminoAcid.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/data/proteome/AminoAcid.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/Version.hpp + dos2unix ./pwiz/Version.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/Version.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideID_flatTest.cpp + dos2unix ./pwiz/analysis/peptideid/PeptideID_flatTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideID_flatTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideID.hpp + dos2unix ./pwiz/analysis/peptideid/PeptideID.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideID.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideIDMap.hpp + dos2unix ./pwiz/analysis/peptideid/PeptideIDMap.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideIDMap.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideIDMapTest.cpp + dos2unix ./pwiz/analysis/peptideid/PeptideIDMapTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideIDMapTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideID_pepXML.hpp + dos2unix ./pwiz/analysis/peptideid/PeptideID_pepXML.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideID_pepXML.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideIDMap.cpp + dos2unix ./pwiz/analysis/peptideid/PeptideIDMap.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideIDMap.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideID_pepXMLTest.cpp + dos2unix ./pwiz/analysis/peptideid/PeptideID_pepXMLTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideID_pepXMLTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideID_flat.hpp + dos2unix ./pwiz/analysis/peptideid/PeptideID_flat.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideID_flat.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideID_pepXML.cpp + dos2unix ./pwiz/analysis/peptideid/PeptideID_pepXML.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideID_pepXML.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peptideid/PeptideID_flat.cpp + dos2unix ./pwiz/analysis/peptideid/PeptideID_flat.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peptideid/PeptideID_flat.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/CubicHermiteSpline.cpp + dos2unix ./pwiz/analysis/demux/CubicHermiteSpline.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/CubicHermiteSpline.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/EnumConstantNotPresentException.hpp + dos2unix ./pwiz/analysis/demux/EnumConstantNotPresentException.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/EnumConstantNotPresentException.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/IDemultiplexer.hpp + dos2unix ./pwiz/analysis/demux/IDemultiplexer.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/IDemultiplexer.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/PrecursorMaskCodec.cpp + dos2unix ./pwiz/analysis/demux/PrecursorMaskCodec.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/PrecursorMaskCodec.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/OverlapDemultiplexer.hpp + dos2unix ./pwiz/analysis/demux/OverlapDemultiplexer.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/OverlapDemultiplexer.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/FSDemux.cpp + dos2unix ./pwiz/analysis/demux/FSDemux.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/FSDemux.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxTypes.hpp + dos2unix ./pwiz/analysis/demux/DemuxTypes.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxTypes.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxHelpers.hpp + dos2unix ./pwiz/analysis/demux/DemuxHelpers.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxHelpers.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/SpectrumPeakExtractor.hpp + dos2unix ./pwiz/analysis/demux/SpectrumPeakExtractor.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/SpectrumPeakExtractor.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/SpectrumPeakExtractorTest.cpp + dos2unix ./pwiz/analysis/demux/SpectrumPeakExtractorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/SpectrumPeakExtractorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxDebugWriter.cpp + dos2unix ./pwiz/analysis/demux/DemuxDebugWriter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxDebugWriter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/MatrixIOTest.cpp + dos2unix ./pwiz/analysis/demux/MatrixIOTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/MatrixIOTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxHelpers.cpp + dos2unix ./pwiz/analysis/demux/DemuxHelpers.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxHelpers.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxDebugReader.hpp + dos2unix ./pwiz/analysis/demux/DemuxDebugReader.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxDebugReader.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxSolver.hpp + dos2unix ./pwiz/analysis/demux/DemuxSolver.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxSolver.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/IInterpolation.hpp + dos2unix ./pwiz/analysis/demux/IInterpolation.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/IInterpolation.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/MSXDemultiplexer.hpp + dos2unix ./pwiz/analysis/demux/MSXDemultiplexer.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/MSXDemultiplexer.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/MatrixIO.hpp + dos2unix ./pwiz/analysis/demux/MatrixIO.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/MatrixIO.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/PrecursorMaskCodec.hpp + dos2unix ./pwiz/analysis/demux/PrecursorMaskCodec.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/PrecursorMaskCodec.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxHelpersTest.cpp + dos2unix ./pwiz/analysis/demux/DemuxHelpersTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxHelpersTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/SpectrumPeakExtractor.cpp + dos2unix ./pwiz/analysis/demux/SpectrumPeakExtractor.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/SpectrumPeakExtractor.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/OverlapDemultiplexer.cpp + dos2unix ./pwiz/analysis/demux/OverlapDemultiplexer.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/OverlapDemultiplexer.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/CubicHermiteSpline.hpp + dos2unix ./pwiz/analysis/demux/CubicHermiteSpline.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/CubicHermiteSpline.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/MatrixIO.cpp + dos2unix ./pwiz/analysis/demux/MatrixIO.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/MatrixIO.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxSolverTest.cpp + dos2unix ./pwiz/analysis/demux/DemuxSolverTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxSolverTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxDebugWriter.hpp + dos2unix ./pwiz/analysis/demux/DemuxDebugWriter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxDebugWriter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/MSXDemultiplexer.cpp + dos2unix ./pwiz/analysis/demux/MSXDemultiplexer.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/MSXDemultiplexer.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/CubicHermiteSplineTest.cpp + dos2unix ./pwiz/analysis/demux/CubicHermiteSplineTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/CubicHermiteSplineTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxDebugReader.cpp + dos2unix ./pwiz/analysis/demux/DemuxDebugReader.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxDebugReader.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxDebugReadWriteTest.cpp + dos2unix ./pwiz/analysis/demux/DemuxDebugReadWriteTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxDebugReadWriteTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/DemuxSolver.cpp + dos2unix ./pwiz/analysis/demux/DemuxSolver.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/DemuxSolver.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/demux/IPrecursorMaskCodec.hpp + dos2unix ./pwiz/analysis/demux/IPrecursorMaskCodec.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/demux/IPrecursorMaskCodec.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/PepXMLCat.hpp + dos2unix ./pwiz/analysis/passive/PepXMLCat.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/PepXMLCat.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/MetadataReporter.cpp + dos2unix ./pwiz/analysis/passive/MetadataReporter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/MetadataReporter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/MSDataCacheTest.cpp + dos2unix ./pwiz/analysis/passive/MSDataCacheTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/MSDataCacheTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/PepXMLCat.cpp + dos2unix ./pwiz/analysis/passive/PepXMLCat.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/PepXMLCat.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RegionAnalyzer.hpp + dos2unix ./pwiz/analysis/passive/RegionAnalyzer.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RegionAnalyzer.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RegionTIC.cpp + dos2unix ./pwiz/analysis/passive/RegionTIC.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RegionTIC.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RegionTIC.hpp + dos2unix ./pwiz/analysis/passive/RegionTIC.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RegionTIC.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/SpectrumBinaryData.cpp + dos2unix ./pwiz/analysis/passive/SpectrumBinaryData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/SpectrumBinaryData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RegionSlice.cpp + dos2unix ./pwiz/analysis/passive/RegionSlice.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RegionSlice.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RegionAnalyzer.cpp + dos2unix ./pwiz/analysis/passive/RegionAnalyzer.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RegionAnalyzer.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/MSDataCache.hpp + dos2unix ./pwiz/analysis/passive/MSDataCache.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/MSDataCache.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/TabularConfig.hpp + dos2unix ./pwiz/analysis/passive/TabularConfig.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/TabularConfig.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/SpectrumBinaryData.hpp + dos2unix ./pwiz/analysis/passive/SpectrumBinaryData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/SpectrumBinaryData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/MetadataReporter.hpp + dos2unix ./pwiz/analysis/passive/MetadataReporter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/MetadataReporter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/TabularConfig.cpp + dos2unix ./pwiz/analysis/passive/TabularConfig.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/TabularConfig.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RegionSIC.cpp + dos2unix ./pwiz/analysis/passive/RegionSIC.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RegionSIC.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/MSDataAnalyzer.hpp + dos2unix ./pwiz/analysis/passive/MSDataAnalyzer.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/MSDataAnalyzer.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/SpectrumTable.hpp + dos2unix ./pwiz/analysis/passive/SpectrumTable.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/SpectrumTable.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/MSDataAnalyzer.cpp + dos2unix ./pwiz/analysis/passive/MSDataAnalyzer.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/MSDataAnalyzer.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RunSummary.hpp + dos2unix ./pwiz/analysis/passive/RunSummary.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RunSummary.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/SpectrumTable.cpp + dos2unix ./pwiz/analysis/passive/SpectrumTable.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/SpectrumTable.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RegionSIC.hpp + dos2unix ./pwiz/analysis/passive/RegionSIC.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RegionSIC.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RegionSlice.hpp + dos2unix ./pwiz/analysis/passive/RegionSlice.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RegionSlice.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/MSDataAnalyzerTest.cpp + dos2unix ./pwiz/analysis/passive/MSDataAnalyzerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/MSDataAnalyzerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/RunSummary.cpp + dos2unix ./pwiz/analysis/passive/RunSummary.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/RunSummary.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/passive/MSDataCache.cpp + dos2unix ./pwiz/analysis/passive/MSDataCache.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/passive/MSDataCache.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/CwtPeakDetectorTest.cpp + dos2unix ./pwiz/analysis/common/CwtPeakDetectorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/CwtPeakDetectorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/ZeroSampleFillerTest.cpp + dos2unix ./pwiz/analysis/common/ZeroSampleFillerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/ZeroSampleFillerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/WhittakerSmootherTest.cpp + dos2unix ./pwiz/analysis/common/WhittakerSmootherTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/WhittakerSmootherTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/ExtraZeroSamplesFilter.cpp + dos2unix ./pwiz/analysis/common/ExtraZeroSamplesFilter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/ExtraZeroSamplesFilter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/CwtPeakDetector.hpp + dos2unix ./pwiz/analysis/common/CwtPeakDetector.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/CwtPeakDetector.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/ZeroSampleFiller.hpp + dos2unix ./pwiz/analysis/common/ZeroSampleFiller.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/ZeroSampleFiller.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/LocalMaximumPeakDetector.cpp + dos2unix ./pwiz/analysis/common/LocalMaximumPeakDetector.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/LocalMaximumPeakDetector.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/DataFilter.hpp + dos2unix ./pwiz/analysis/common/DataFilter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/DataFilter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/SavitzkyGolaySmootherTest.cpp + dos2unix ./pwiz/analysis/common/SavitzkyGolaySmootherTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/SavitzkyGolaySmootherTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/WhittakerSmoother.cpp + dos2unix ./pwiz/analysis/common/WhittakerSmoother.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/WhittakerSmoother.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/CwtPeakDetector.cpp + dos2unix ./pwiz/analysis/common/CwtPeakDetector.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/CwtPeakDetector.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/LocalMaximumPeakDetector.hpp + dos2unix ./pwiz/analysis/common/LocalMaximumPeakDetector.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/LocalMaximumPeakDetector.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/LocalMaximumPeakDetectorTest.cpp + dos2unix ./pwiz/analysis/common/LocalMaximumPeakDetectorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/LocalMaximumPeakDetectorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/ExtraZeroSamplesFilter.hpp + dos2unix ./pwiz/analysis/common/ExtraZeroSamplesFilter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/ExtraZeroSamplesFilter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/Smoother.hpp + dos2unix ./pwiz/analysis/common/Smoother.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/Smoother.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/PeakDetector.hpp + dos2unix ./pwiz/analysis/common/PeakDetector.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/PeakDetector.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/WhittakerSmoother.hpp + dos2unix ./pwiz/analysis/common/WhittakerSmoother.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/WhittakerSmoother.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/SavitzkyGolaySmoother.cpp + dos2unix ./pwiz/analysis/common/SavitzkyGolaySmoother.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/SavitzkyGolaySmoother.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/ZeroSampleFiller.cpp + dos2unix ./pwiz/analysis/common/ZeroSampleFiller.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/ZeroSampleFiller.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/SavitzkyGolaySmoother.hpp + dos2unix ./pwiz/analysis/common/SavitzkyGolaySmoother.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/SavitzkyGolaySmoother.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/common/ExtraZeroSamplesFilterTest.cpp + dos2unix ./pwiz/analysis/common/ExtraZeroSamplesFilterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/common/ExtraZeroSamplesFilterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/Version.hpp + dos2unix ./pwiz/analysis/Version.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/Version.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/proteome_processing/ProteinList_Filter.hpp + dos2unix ./pwiz/analysis/proteome_processing/ProteinList_Filter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/proteome_processing/ProteinList_Filter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/proteome_processing/ProteinList_DecoyGeneratorTest.cpp + dos2unix ./pwiz/analysis/proteome_processing/ProteinList_DecoyGeneratorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/proteome_processing/ProteinList_DecoyGeneratorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/proteome_processing/ProteinList_DecoyGenerator.hpp + dos2unix ./pwiz/analysis/proteome_processing/ProteinList_DecoyGenerator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/proteome_processing/ProteinList_DecoyGenerator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/proteome_processing/ProteinList_Filter.cpp + dos2unix ./pwiz/analysis/proteome_processing/ProteinList_Filter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/proteome_processing/ProteinList_Filter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/proteome_processing/ProteinListFactory.hpp + dos2unix ./pwiz/analysis/proteome_processing/ProteinListFactory.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/proteome_processing/ProteinListFactory.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/proteome_processing/ProteinListFactoryTest.cpp + dos2unix ./pwiz/analysis/proteome_processing/ProteinListFactoryTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/proteome_processing/ProteinListFactoryTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/proteome_processing/ProteinList_FilterTest.cpp + dos2unix ./pwiz/analysis/proteome_processing/ProteinList_FilterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/proteome_processing/ProteinList_FilterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/proteome_processing/ProteinList_DecoyGenerator.cpp + dos2unix ./pwiz/analysis/proteome_processing/ProteinList_DecoyGenerator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/proteome_processing/ProteinList_DecoyGenerator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/proteome_processing/ProteinListFactory.cpp + dos2unix ./pwiz/analysis/proteome_processing/ProteinListFactory.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/proteome_processing/ProteinListFactory.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/ParameterEstimator.cpp + dos2unix ./pwiz/analysis/frequency/ParameterEstimator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/ParameterEstimator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/FrequencyEstimatorPhysicalModel.hpp + dos2unix ./pwiz/analysis/frequency/FrequencyEstimatorPhysicalModel.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/FrequencyEstimatorPhysicalModel.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/TruncatedLorentzianEstimator.hpp + dos2unix ./pwiz/analysis/frequency/TruncatedLorentzianEstimator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/TruncatedLorentzianEstimator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/FrequencyEstimatorSimple.hpp + dos2unix ./pwiz/analysis/frequency/FrequencyEstimatorSimple.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/FrequencyEstimatorSimple.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/FrequencyEstimator.hpp + dos2unix ./pwiz/analysis/frequency/FrequencyEstimator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/FrequencyEstimator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/ParametrizedFunction.hpp + dos2unix ./pwiz/analysis/frequency/ParametrizedFunction.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/ParametrizedFunction.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/TruncatedLorentzian.hpp + dos2unix ./pwiz/analysis/frequency/TruncatedLorentzian.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/TruncatedLorentzian.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/MagnitudeLorentzianTestData.hpp + dos2unix ./pwiz/analysis/frequency/MagnitudeLorentzianTestData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/MagnitudeLorentzianTestData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/PeakDetectorNaiveTest.cpp + dos2unix ./pwiz/analysis/frequency/PeakDetectorNaiveTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/PeakDetectorNaiveTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/MagnitudeLorentzianTest.cpp + dos2unix ./pwiz/analysis/frequency/MagnitudeLorentzianTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/MagnitudeLorentzianTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/PeakDetectorMatchedFilter.cpp + dos2unix ./pwiz/analysis/frequency/PeakDetectorMatchedFilter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/PeakDetectorMatchedFilter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/TruncatedLorentzianTest.cpp + dos2unix ./pwiz/analysis/frequency/TruncatedLorentzianTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/TruncatedLorentzianTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/TruncatedLorentzianParameters.cpp + dos2unix ./pwiz/analysis/frequency/TruncatedLorentzianParameters.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/TruncatedLorentzianParameters.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/PeakDetectorMatchedFilterTestData.cpp + dos2unix ./pwiz/analysis/frequency/PeakDetectorMatchedFilterTestData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/PeakDetectorMatchedFilterTestData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/TruncatedLorentzian.cpp + dos2unix ./pwiz/analysis/frequency/TruncatedLorentzian.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/TruncatedLorentzian.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/ParametrizedFunctionTest.cpp + dos2unix ./pwiz/analysis/frequency/ParametrizedFunctionTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/ParametrizedFunctionTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/FrequencyEstimatorPhysicalModel.cpp + dos2unix ./pwiz/analysis/frequency/FrequencyEstimatorPhysicalModel.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/FrequencyEstimatorPhysicalModel.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/ParameterEstimator.hpp + dos2unix ./pwiz/analysis/frequency/ParameterEstimator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/ParameterEstimator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/MagnitudeLorentzianTestData.cpp + dos2unix ./pwiz/analysis/frequency/MagnitudeLorentzianTestData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/MagnitudeLorentzianTestData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/FrequencyEstimatorSimple.cpp + dos2unix ./pwiz/analysis/frequency/FrequencyEstimatorSimple.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/FrequencyEstimatorSimple.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/TruncatedLorentzianEstimator.cpp + dos2unix ./pwiz/analysis/frequency/TruncatedLorentzianEstimator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/TruncatedLorentzianEstimator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/FrequencyEstimatorSimpleTest.cpp + dos2unix ./pwiz/analysis/frequency/FrequencyEstimatorSimpleTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/FrequencyEstimatorSimpleTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/PeakDetectorMatchedFilterTest.cpp + dos2unix ./pwiz/analysis/frequency/PeakDetectorMatchedFilterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/PeakDetectorMatchedFilterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/PeakDetectorNaive.hpp + dos2unix ./pwiz/analysis/frequency/PeakDetectorNaive.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/PeakDetectorNaive.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/PeakDetectorMatchedFilter.hpp + dos2unix ./pwiz/analysis/frequency/PeakDetectorMatchedFilter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/PeakDetectorMatchedFilter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/PeakDetectorNaive.cpp + dos2unix ./pwiz/analysis/frequency/PeakDetectorNaive.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/PeakDetectorNaive.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/TruncatedLorentzianParameters.hpp + dos2unix ./pwiz/analysis/frequency/TruncatedLorentzianParameters.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/TruncatedLorentzianParameters.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/PeakDetector.hpp + dos2unix ./pwiz/analysis/frequency/PeakDetector.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/PeakDetector.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/MagnitudeLorentzian.cpp + dos2unix ./pwiz/analysis/frequency/MagnitudeLorentzian.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/MagnitudeLorentzian.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/FrequencyEstimatorPhysicalModelTest.cpp + dos2unix ./pwiz/analysis/frequency/FrequencyEstimatorPhysicalModelTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/FrequencyEstimatorPhysicalModelTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/MagnitudeLorentzian.hpp + dos2unix ./pwiz/analysis/frequency/MagnitudeLorentzian.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/MagnitudeLorentzian.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/DerivativeTest.hpp + dos2unix ./pwiz/analysis/frequency/DerivativeTest.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/DerivativeTest.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/PeakDetectorMatchedFilterTestData.hpp + dos2unix ./pwiz/analysis/frequency/PeakDetectorMatchedFilterTestData.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/PeakDetectorMatchedFilterTestData.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/frequency/TruncatedLorentzianParametersTest.cpp + dos2unix ./pwiz/analysis/frequency/TruncatedLorentzianParametersTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/frequency/TruncatedLorentzianParametersTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/Version.cpp + dos2unix ./pwiz/analysis/Version.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/Version.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/NoiseTest.cpp + dos2unix ./pwiz/analysis/peakdetect/NoiseTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/NoiseTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFinder.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakFinder.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFinder.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureDetectorTuningTest.cpp + dos2unix ./pwiz/analysis/peakdetect/FeatureDetectorTuningTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureDetectorTuningTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/Noise.cpp + dos2unix ./pwiz/analysis/peakdetect/Noise.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/Noise.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/Noise.hpp + dos2unix ./pwiz/analysis/peakdetect/Noise.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/Noise.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureModelerTest.cpp + dos2unix ./pwiz/analysis/peakdetect/FeatureModelerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureModelerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakelPickerTest.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakelPickerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakelPickerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFamilyDetector.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakFamilyDetector.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFamilyDetector.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFamilyDetectorFT.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakFamilyDetectorFT.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFamilyDetectorFT.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/MZRTFieldTest.cpp + dos2unix ./pwiz/analysis/peakdetect/MZRTFieldTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/MZRTFieldTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFamilyDetectorFT.hpp + dos2unix ./pwiz/analysis/peakdetect/PeakFamilyDetectorFT.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFamilyDetectorFT.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakExtractor.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakExtractor.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakExtractor.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakExtractor.hpp + dos2unix ./pwiz/analysis/peakdetect/PeakExtractor.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakExtractor.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureDetectorSimple.cpp + dos2unix ./pwiz/analysis/peakdetect/FeatureDetectorSimple.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureDetectorSimple.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFamilyDetectorFTTest.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakFamilyDetectorFTTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFamilyDetectorFTTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakelPicker.hpp + dos2unix ./pwiz/analysis/peakdetect/PeakelPicker.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakelPicker.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakExtractorTest.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakExtractorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakExtractorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFinderTest.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakFinderTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFinderTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureModeler.hpp + dos2unix ./pwiz/analysis/peakdetect/FeatureModeler.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureModeler.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakelGrower.hpp + dos2unix ./pwiz/analysis/peakdetect/PeakelGrower.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakelGrower.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakelGrowerTest.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakelGrowerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakelGrowerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFitterTest.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakFitterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFitterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFitter.hpp + dos2unix ./pwiz/analysis/peakdetect/PeakFitter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFitter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/MZRTField.cpp + dos2unix ./pwiz/analysis/peakdetect/MZRTField.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/MZRTField.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureDetectorSimple.hpp + dos2unix ./pwiz/analysis/peakdetect/FeatureDetectorSimple.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureDetectorSimple.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureDetectorPeakel.hpp + dos2unix ./pwiz/analysis/peakdetect/FeatureDetectorPeakel.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureDetectorPeakel.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureDetectorPeakelTest.cpp + dos2unix ./pwiz/analysis/peakdetect/FeatureDetectorPeakelTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureDetectorPeakelTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureDetector.hpp + dos2unix ./pwiz/analysis/peakdetect/FeatureDetector.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureDetector.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureModeler.cpp + dos2unix ./pwiz/analysis/peakdetect/FeatureModeler.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureModeler.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureDetectorPeakel.cpp + dos2unix ./pwiz/analysis/peakdetect/FeatureDetectorPeakel.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureDetectorPeakel.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFinder.hpp + dos2unix ./pwiz/analysis/peakdetect/PeakFinder.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFinder.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFamilyDetector.hpp + dos2unix ./pwiz/analysis/peakdetect/PeakFamilyDetector.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFamilyDetector.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFitter.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakFitter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFitter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakFamilyDetectorFTTestData.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakFamilyDetectorFTTestData.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakFamilyDetectorFTTestData.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/msextract.cpp + dos2unix ./pwiz/analysis/peakdetect/msextract.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/msextract.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakelPicker.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakelPicker.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakelPicker.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/MZRTField.hpp + dos2unix ./pwiz/analysis/peakdetect/MZRTField.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/MZRTField.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/FeatureDetectorSimpleTest.cpp + dos2unix ./pwiz/analysis/peakdetect/FeatureDetectorSimpleTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/FeatureDetectorSimpleTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/peakdetect/PeakelGrower.cpp + dos2unix ./pwiz/analysis/peakdetect/PeakelGrower.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/peakdetect/PeakelGrower.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefaultTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefaultTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefaultTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_MZWindow.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_MZWindow.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_MZWindow.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_3D.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_3D.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_3D.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PeakFilter.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PeakFilter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PeakFilter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/MS2Deisotoper.cpp + dos2unix ./pwiz/analysis/spectrum_processing/MS2Deisotoper.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/MS2Deisotoper.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefiner.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefiner.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefiner.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_MZWindowTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_MZWindowTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_MZWindowTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculator.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PeakFilter.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PeakFilter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PeakFilter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculatorTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculatorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculatorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/PrecursorMassFilter.hpp + dos2unix ./pwiz/analysis/spectrum_processing/PrecursorMassFilter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/PrecursorMassFilter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PeakPicker.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PeakPicker.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PeakPicker.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PeakPicker.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PeakPicker.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PeakPicker.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/MS2NoiseFilter.cpp + dos2unix ./pwiz/analysis/spectrum_processing/MS2NoiseFilter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/MS2NoiseFilter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixer.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixer.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixer.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ScanSummerTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ScanSummerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ScanSummerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_3D_Test.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_3D_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_3D_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_MZRefinerTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_MZRefinerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_MZRefinerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumListFactory.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumListFactory.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumListFactory.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefineTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefineTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefineTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/MS2DeisotoperTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/MS2DeisotoperTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/MS2DeisotoperTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixer.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixer.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixer.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_Filter.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_Filter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_Filter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_Smoother.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_Smoother.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_Smoother.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixerTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_MetadataFixerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_MZWindow.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_MZWindow.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_MZWindow.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/ThresholdFilter.cpp + dos2unix ./pwiz/analysis/spectrum_processing/ThresholdFilter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/ThresholdFilter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/ThresholdFilter.hpp + dos2unix ./pwiz/analysis/spectrum_processing/ThresholdFilter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/ThresholdFilter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_MZRefiner.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_MZRefiner.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_MZRefiner.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_3D.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_3D.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_3D.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ScanSummer.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ScanSummer.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ScanSummer.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculator.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculator.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculator.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotope.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotope.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotope.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_IonMobility_Test.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_IonMobility_Test.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_IonMobility_Test.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_Sorter.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_Sorter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_Sorter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefinerTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefinerTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefinerTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_TitleMaker.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_TitleMaker.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_TitleMaker.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculator.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRecalculator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotope.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotope.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotope.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_Filter.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_Filter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_Filter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_TitleMaker.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_TitleMaker.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_TitleMaker.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotopeTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotopeTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeFromIsotopeTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/PrecursorRecalculator.hpp + dos2unix ./pwiz/analysis/spectrum_processing/PrecursorRecalculator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/PrecursorRecalculator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_MZRefiner.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_MZRefiner.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_MZRefiner.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_DemuxTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_DemuxTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_DemuxTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PeakFilterTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PeakFilterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PeakFilterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/MS2NoiseFilter.hpp + dos2unix ./pwiz/analysis/spectrum_processing/MS2NoiseFilter.hpp BUILDSTDERR: dos2unix: Binary symbol 0x02 found at line 42 BUILDSTDERR: dos2unix: Skipping binary file ./pwiz/analysis/spectrum_processing/MS2NoiseFilter.hpp + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumListFactoryTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumListFactoryTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumListFactoryTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/MS2Deisotoper.hpp + dos2unix ./pwiz/analysis/spectrum_processing/MS2Deisotoper.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/MS2Deisotoper.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/PrecursorMassFilter.cpp + dos2unix ./pwiz/analysis/spectrum_processing/PrecursorMassFilter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/PrecursorMassFilter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ScanSummer.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ScanSummer.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ScanSummer.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_FilterTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_FilterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_FilterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_IonMobility.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_IonMobility.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_IonMobility.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_Demux.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_Demux.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_Demux.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefine.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefine.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefine.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_SorterTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_SorterTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_SorterTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_Smoother.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_Smoother.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_Smoother.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_IonMobility.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_IonMobility.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_IonMobility.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculatorTest.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculatorTest.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculatorTest.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ZeroSamplesFilter.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ZeroSamplesFilter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ZeroSamplesFilter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_Sorter.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_Sorter.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_Sorter.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefine.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefine.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_PrecursorRefine.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefault.cpp + dos2unix ./pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefault.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefault.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ZeroSamplesFilter.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ZeroSamplesFilter.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ZeroSamplesFilter.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefault.hpp + dos2unix ./pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefault.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/PrecursorRecalculatorDefault.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumListFactory.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumListFactory.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumListFactory.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculator.hpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculator.hpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_ChargeStateCalculator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefiner.cpp + dos2unix ./pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefiner.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/analysis/spectrum_processing/SpectrumList_LockmassRefiner.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./pwiz/Version.cpp + dos2unix ./pwiz/Version.cpp BUILDSTDERR: dos2unix: converting file ./pwiz/Version.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/CSpline/CSpline.cpp + dos2unix ./libraries/CSpline/CSpline.cpp BUILDSTDERR: dos2unix: converting file ./libraries/CSpline/CSpline.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/scan_cvs_path.cpp + dos2unix ./libraries/boost_aux/tools/bcp/scan_cvs_path.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/scan_cvs_path.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/fileview.cpp + dos2unix ./libraries/boost_aux/tools/bcp/fileview.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/fileview.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/fileview.hpp + dos2unix ./libraries/boost_aux/tools/bcp/fileview.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/fileview.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/output_licence_info.cpp + dos2unix ./libraries/boost_aux/tools/bcp/output_licence_info.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/output_licence_info.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/add_path.cpp + dos2unix ./libraries/boost_aux/tools/bcp/add_path.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/add_path.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/file_types.cpp + dos2unix ./libraries/boost_aux/tools/bcp/file_types.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/file_types.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/main.cpp + dos2unix ./libraries/boost_aux/tools/bcp/main.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/main.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/licence_info.cpp + dos2unix ./libraries/boost_aux/tools/bcp/licence_info.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/licence_info.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/bcp.hpp + dos2unix ./libraries/boost_aux/tools/bcp/bcp.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/bcp.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/bcp_imp.cpp + dos2unix ./libraries/boost_aux/tools/bcp/bcp_imp.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/bcp_imp.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/licence_info.hpp + dos2unix ./libraries/boost_aux/tools/bcp/licence_info.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/licence_info.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/path_operations.cpp + dos2unix ./libraries/boost_aux/tools/bcp/path_operations.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/path_operations.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/scan_licence.cpp + dos2unix ./libraries/boost_aux/tools/bcp/scan_licence.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/scan_licence.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/copy_path.cpp + dos2unix ./libraries/boost_aux/tools/bcp/copy_path.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/copy_path.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/add_dependent_lib.cpp + dos2unix ./libraries/boost_aux/tools/bcp/add_dependent_lib.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/add_dependent_lib.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/tools/bcp/bcp_imp.hpp + dos2unix ./libraries/boost_aux/tools/bcp/bcp_imp.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/tools/bcp/bcp_imp.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/libs/nowide/src/iostream.cpp + dos2unix ./libraries/boost_aux/libs/nowide/src/iostream.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/libs/nowide/src/iostream.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/libs/thread/src/win32/tss_pe-before_1_44.cpp + dos2unix ./libraries/boost_aux/libs/thread/src/win32/tss_pe-before_1_44.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/libs/thread/src/win32/tss_pe-before_1_44.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/libs/thread/src/win32/tss_pe.cpp + dos2unix ./libraries/boost_aux/libs/thread/src/win32/tss_pe.cpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/libs/thread/src/win32/tss_pe.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/iostream.hpp + dos2unix ./libraries/boost_aux/boost/nowide/iostream.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/iostream.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/windows.hpp + dos2unix ./libraries/boost_aux/boost/nowide/windows.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/windows.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/cenv.hpp + dos2unix ./libraries/boost_aux/boost/nowide/cenv.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/cenv.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/cstdio.hpp + dos2unix ./libraries/boost_aux/boost/nowide/cstdio.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/cstdio.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/cstdlib.hpp + dos2unix ./libraries/boost_aux/boost/nowide/cstdlib.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/cstdlib.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/args.hpp + dos2unix ./libraries/boost_aux/boost/nowide/args.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/args.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/fstream.hpp + dos2unix ./libraries/boost_aux/boost/nowide/fstream.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/fstream.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/system.hpp + dos2unix ./libraries/boost_aux/boost/nowide/system.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/system.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/config.hpp + dos2unix ./libraries/boost_aux/boost/nowide/config.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/config.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/filebuf.hpp + dos2unix ./libraries/boost_aux/boost/nowide/filebuf.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/filebuf.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/convert.hpp + dos2unix ./libraries/boost_aux/boost/nowide/convert.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/convert.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/nowide/stackstring.hpp + dos2unix ./libraries/boost_aux/boost/nowide/stackstring.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/nowide/stackstring.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/enum.hpp + dos2unix ./libraries/boost_aux/boost/enum.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/enum.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/interprocess/detail/win32_api.hpp + dos2unix ./libraries/boost_aux/boost/interprocess/detail/win32_api.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/interprocess/detail/win32_api.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/enum/bitfield.hpp + dos2unix ./libraries/boost_aux/boost/enum/bitfield.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/enum/bitfield.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/enum/macros.hpp + dos2unix ./libraries/boost_aux/boost/enum/macros.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/enum/macros.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/enum/base.hpp + dos2unix ./libraries/boost_aux/boost/enum/base.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/enum/base.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/enum/iterator.hpp + dos2unix ./libraries/boost_aux/boost/enum/iterator.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/enum/iterator.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/iostreams/filter/base64.hpp + dos2unix ./libraries/boost_aux/boost/iostreams/filter/base64.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/iostreams/filter/base64.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/iostreams/arbitrary_positional_facade.hpp + dos2unix ./libraries/boost_aux/boost/iostreams/arbitrary_positional_facade.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/iostreams/arbitrary_positional_facade.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/utility/thread_specific_singleton.hpp + dos2unix ./libraries/boost_aux/boost/utility/thread_specific_singleton.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/utility/thread_specific_singleton.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/utility/singleton.hpp + dos2unix ./libraries/boost_aux/boost/utility/singleton.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/utility/singleton.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/utility/mutexed_singleton.hpp + dos2unix ./libraries/boost_aux/boost/utility/mutexed_singleton.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/utility/mutexed_singleton.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/utility/detail/singleton_manager.hpp + dos2unix ./libraries/boost_aux/boost/utility/detail/singleton_manager.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/utility/detail/singleton_manager.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/utility/detail/member_dereference.hpp + dos2unix ./libraries/boost_aux/boost/utility/detail/member_dereference.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/utility/detail/member_dereference.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/utility/detail/restricted.hpp + dos2unix ./libraries/boost_aux/boost/utility/detail/restricted.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/utility/detail/restricted.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/boost_aux/boost/foreach_field.hpp + dos2unix ./libraries/boost_aux/boost/foreach_field.hpp BUILDSTDERR: dos2unix: converting file ./libraries/boost_aux/boost/foreach_field.hpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/libsvm-3.0/svm.cpp + dos2unix ./libraries/libsvm-3.0/svm.cpp BUILDSTDERR: dos2unix: converting file ./libraries/libsvm-3.0/svm.cpp to Unix format... + for i in `find . -type f \( -name "*.cpp" -o -name "*.hpp" \)` + chmod a-x ./libraries/libsvm-3.0/svm-model2code.cpp + dos2unix ./libraries/libsvm-3.0/svm-model2code.cpp BUILDSTDERR: dos2unix: converting file ./libraries/libsvm-3.0/svm-model2code.cpp to Unix format... + rm -f libraries/libsvm-3.0/svm.h + sed -e 's|-I"./libraries/libsvm-3.0"||g' -i autotools/Makefile.am + sed -e 's|AM_CONFIG_HEADER|AM_CONFIG_HEADERS|g' -i autotools/aclocal.m4 + sed -e 's|AC_PROG_LIBTOOL|LT_INIT|g' -i autotools/configure.ac autotools/configure + pushd autotools ~/build/BUILD/pwiz/autotools ~/build/BUILD/pwiz + autoreconf -ivf BUILDSTDERR: autoreconf: Entering directory `.' BUILDSTDERR: autoreconf: configure.ac: not using Gettext BUILDSTDERR: autoreconf: running: aclocal --force -I . BUILDSTDERR: autoreconf: configure.ac: tracing BUILDSTDERR: autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in '.'. libtoolize: copying file './libtool.m4' libtoolize: copying file './ltoptions.m4' libtoolize: copying file './ltsugar.m4' libtoolize: copying file './ltversion.m4' libtoolize: copying file './lt~obsolete.m4' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac and libtoolize: rerunning libtoolize, to keep the correct libtool macros in-tree. BUILDSTDERR: autoreconf: running: /usr/bin/autoconf --force BUILDSTDERR: autoreconf: configure.ac: not using Autoheader BUILDSTDERR: autoreconf: running: automake --add-missing --copy --force-missing BUILDSTDERR: configure.ac:11: installing './compile' BUILDSTDERR: configure.ac:6: installing './missing' BUILDSTDERR: Makefile.am: installing './depcomp' BUILDSTDERR: autoreconf: Leaving directory `.' ~/build/BUILD/pwiz + popd + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.UFiWIh + umask 022 + cd /builddir/build/BUILD + cd pwiz + CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CFLAGS + CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection' + export CXXFLAGS + FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' + export LDFLAGS + '[' 1 = 1 ']' BUILDSTDERR: +++ dirname autotools/configure BUILDSTDERR: ++ find autotools -name config.guess -o -name config.sub + for i in $(find $(dirname autotools/configure) -name config.guess -o -name config.sub) BUILDSTDERR: ++ basename autotools/config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f autotools/config.sub BUILDSTDERR: ++ basename autotools/config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub autotools/config.sub '/usr/lib/rpm/redhat/config.sub' -> 'autotools/config.sub' + for i in $(find $(dirname autotools/configure) -name config.guess -o -name config.sub) BUILDSTDERR: ++ basename autotools/config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f autotools/config.guess BUILDSTDERR: ++ basename autotools/config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess autotools/config.guess '/usr/lib/rpm/redhat/config.guess' -> 'autotools/config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' BUILDSTDERR: ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags=-Wl,-z,now' -specs=/usr/lib/rpm/redhat/redhat-hardened-ld~ ./autotools/ltmain.sh BUILDSTDERR: /usr/bin/sed: -e expression #1, char 44: unterminated `s' command RPM build errors: BUILDSTDERR: error: Bad exit status from /var/tmp/rpm-tmp.UFiWIh (%build) BUILDSTDERR: Bad exit status from /var/tmp/rpm-tmp.UFiWIh (%build) Child return code was: 1 EXCEPTION: [Error()] Traceback (most recent call last): File "/usr/lib/python3.6/site-packages/mockbuild/trace_decorator.py", line 96, in trace result = func(*args, **kw) File "/usr/lib/python3.6/site-packages/mockbuild/util.py", line 626, in do raise exception.Error("Command failed: \n # %s\n%s" % (command, output), child.returncode) mockbuild.exception.Error: Command failed: # bash --login -c /usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libpwiz.spec