Mock Version: 1.4.9
Mock Version: 1.4.9
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/staden-io_lib.spec'], chrootPath='/var/lib/mock/f29-build-10202-4610/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x200211c710>timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/staden-io_lib.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False
Building target platforms: riscv64
Building for target riscv64
Wrote: /builddir/build/SRPMS/staden-io_lib-1.12.4-14.fc29.src.rpm
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/staden-io_lib.spec'], chrootPath='/var/lib/mock/f29-build-10202-4610/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x200211c710>timeout=345600uid=998gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/staden-io_lib.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False
Building target platforms: riscv64
Building for target riscv64
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.fbeJXR
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf io_lib-1.12.4
+ /usr/bin/gzip -dc /builddir/build/SOURCES/io_lib-1.12.4.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd io_lib-1.12.4
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ mv io_lib-config.in staden-io_lib-config.in
+ sed -i s/libread/libstaden-read/g io_lib/Makefile.in progs/Makefile.in
+ sed -i s/lread/lstaden-read/ staden-io_lib-config.in
+ sed -i s/io_lib-config/staden-io_lib-config/g configure Makefile.in
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.sM14si
+ umask 022
+ cd /builddir/build/BUILD
+ cd io_lib-1.12.4
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
+ '[' 1 = 1 ']'
BUILDSTDERR: +++ dirname ./configure
BUILDSTDERR: ++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
BUILDSTDERR: ++ basename ./config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./config.sub
BUILDSTDERR: ++ basename ./config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub
'/usr/lib/rpm/redhat/config.sub' -> './config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
BUILDSTDERR: ++ basename ./config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./config.guess
BUILDSTDERR: ++ basename ./config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess
'/usr/lib/rpm/redhat/config.guess' -> './config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
BUILDSTDERR: ++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh
+ ./configure --build=riscv64-koji-linux-gnu --host=riscv64-koji-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --disable-static
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether to enable maintainer-specific portions of Makefiles... no
checking for riscv64-koji-linux-gnu-gcc... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking build system type... riscv64-koji-linux-gnu
checking host system type... riscv64-koji-linux-gnu
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for /usr/bin/ld option to reload object files... -r
checking for BSD-compatible nm... /usr/bin/nm -B
checking whether ln -s works... yes
checking how to recognise dependent libraries... pass_all
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking for riscv64-koji-linux-gnu-g++... no
checking for riscv64-koji-linux-gnu-c++... no
checking for riscv64-koji-linux-gnu-gpp... no
checking for riscv64-koji-linux-gnu-aCC... no
checking for riscv64-koji-linux-gnu-CC... no
checking for riscv64-koji-linux-gnu-cxx... no
checking for riscv64-koji-linux-gnu-cc++... no
checking for riscv64-koji-linux-gnu-cl.exe... no
checking for riscv64-koji-linux-gnu-FCC... no
checking for riscv64-koji-linux-gnu-KCC... no
checking for riscv64-koji-linux-gnu-RCC... no
checking for riscv64-koji-linux-gnu-xlC_r... no
checking for riscv64-koji-linux-gnu-xlC... no
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking how to run the C++ preprocessor... g++ -E
checking for riscv64-koji-linux-gnu-g77... no
checking for riscv64-koji-linux-gnu-xlf... no
checking for riscv64-koji-linux-gnu-f77... no
checking for riscv64-koji-linux-gnu-frt... no
checking for riscv64-koji-linux-gnu-pgf77... no
checking for riscv64-koji-linux-gnu-cf77... no
checking for riscv64-koji-linux-gnu-fort77... no
checking for riscv64-koji-linux-gnu-fl32... no
checking for riscv64-koji-linux-gnu-af77... no
checking for riscv64-koji-linux-gnu-xlf90... no
checking for riscv64-koji-linux-gnu-f90... no
checking for riscv64-koji-linux-gnu-pgf90... no
checking for riscv64-koji-linux-gnu-pghpf... no
checking for riscv64-koji-linux-gnu-epcf90... no
checking for riscv64-koji-linux-gnu-gfortran... no
checking for riscv64-koji-linux-gnu-g95... no
checking for riscv64-koji-linux-gnu-xlf95... no
checking for riscv64-koji-linux-gnu-f95... no
checking for riscv64-koji-linux-gnu-fort... no
checking for riscv64-koji-linux-gnu-ifort... no
checking for riscv64-koji-linux-gnu-ifc... no
checking for riscv64-koji-linux-gnu-efc... no
checking for riscv64-koji-linux-gnu-pgf95... no
checking for riscv64-koji-linux-gnu-lf95... no
checking for riscv64-koji-linux-gnu-ftn... no
checking for g77... no
checking for xlf... no
checking for f77... no
checking for frt... no
checking for pgf77... no
checking for cf77... no
checking for fort77... no
checking for fl32... no
checking for af77... no
checking for xlf90... no
checking for f90... no
checking for pgf90... no
checking for pghpf... no
checking for epcf90... no
checking for gfortran... no
checking for g95... no
checking for xlf95... no
checking for f95... no
checking for fort... no
checking for ifort... no
checking for ifc... no
checking for efc... no
checking for pgf95... no
checking for lf95... no
checking for ftn... no
checking whether we are using the GNU Fortran 77 compiler... no
checking whether  accepts -g... no
checking the maximum length of command line arguments... 32768
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for objdir... .libs
checking for riscv64-koji-linux-gnu-ar... no
checking for ar... ar
checking for riscv64-koji-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking for riscv64-koji-linux-gnu-strip... no
checking for strip... strip
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC
checking if gcc PIC flag -fPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
BUILDSTDERR: checking dynamic linker characteristics... cat: 'ld.so.conf.d/*.conf': No such file or directory
GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
configure: creating libtool
appending configuration tag "CXX" to libtool
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC
checking if g++ PIC flag -fPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
BUILDSTDERR: checking dynamic linker characteristics... cat: 'ld.so.conf.d/*.conf': No such file or directory
GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
appending configuration tag "F77" to libtool
host=riscv64-koji-linux-gnu
Fixing libtool for -rpath problems.
checking for gawk... (cached) gawk
checking for curl-config... /usr/bin/curl-config
checking for the version of libcurl... 7.60.0
checking whether libcurl just needs -lcurl... yes
checking whether libcurl is usable... yes
checking for curl_free... yes
checking for inflateEnd in -lz... yes
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking for library containing gethostbyname... none required
checking for library containing socket... none required
checking whether byte ordering is bigendian... no
checking for ANSI C header files... (cached) yes
checking for sys/wait.h that is POSIX.1 compatible... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking for unistd.h... (cached) yes
checking for zlib.h... (cached) yes
checking whether byte ordering is bigendian... (cached) no
checking size of short... 2
checking size of int... 4
checking size of long... 8
checking for inline... inline
checking for mode_t... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGEFILE_SOURCE value needed for large files... no
checking for library containing cos... -lm
checking for strdup... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating io_lib/Makefile
config.status: creating progs/Makefile
config.status: creating tests/Makefile
config.status: creating staden-io_lib-config
config.status: creating io_lib/os.h
config.status: creating io_lib_config.h
config.status: executing depfiles commands
+ sed -i 's+\(search_path_spec="\)+\1/lib64 /usr/lib64 +' libtool
+ make -j4
make  all-recursive
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
Making all in io_lib
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-Read.lo `test -f 'Read.c' || echo './'`Read.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo './'`scf_extras.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo './'`translate.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-compression.lo `test -f 'compression.c' || echo './'`compression.c
mkdir .libs
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c Read.c  -fPIC -DPIC -o .libs/libstaden_read_la-Read.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_extras.c  -fPIC -DPIC -o .libs/libstaden_read_la-scf_extras.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c translate.c  -fPIC -DPIC -o .libs/libstaden_read_la-translate.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c compression.c  -fPIC -DPIC -o .libs/libstaden_read_la-compression.o
BUILDSTDERR: translate.c: In function 'read2exp':
BUILDSTDERR: translate.c:292:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:   if (p = strrchr(EN, '/'))
BUILDSTDERR:       ^
BUILDSTDERR: translate.c:302:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:       if (cp = strrchr(read->trace_name, '/'))
BUILDSTDERR:           ^~
BUILDSTDERR: translate.c: In function 'exp2read':
BUILDSTDERR: translate.c:650:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:   if (fp = open_trace_file(exp_get_entry(e, EFLT_LN), fn)) {
BUILDSTDERR:       ^~
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-ztr.lo `test -f 'ztr.c' || echo './'`ztr.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-ztr_translate.lo `test -f 'ztr_translate.c' || echo './'`ztr_translate.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c ztr.c  -fPIC -DPIC -o .libs/libstaden_read_la-ztr.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c ztr_translate.c  -fPIC -DPIC -o .libs/libstaden_read_la-ztr_translate.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo './'`deflate_interlaced.c
BUILDSTDERR: ztr_translate.c:335:14: warning: 'ztr_encode_confidence_1' defined but not used [-Wunused-function]
BUILDSTDERR:  static char *ztr_encode_confidence_1(ztr_t *z,
BUILDSTDERR:               ^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: ztr_translate.c:182:14: warning: 'ztr_encode_samples_T' defined but not used [-Wunused-function]
BUILDSTDERR:  static char *ztr_encode_samples_T(ztr_t *z,
BUILDSTDERR:               ^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: ztr_translate.c:175:14: warning: 'ztr_encode_samples_G' defined but not used [-Wunused-function]
BUILDSTDERR:  static char *ztr_encode_samples_G(ztr_t *z,
BUILDSTDERR:               ^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: ztr_translate.c:168:14: warning: 'ztr_encode_samples_C' defined but not used [-Wunused-function]
BUILDSTDERR:  static char *ztr_encode_samples_C(ztr_t *z,
BUILDSTDERR:               ^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: ztr_translate.c:161:14: warning: 'ztr_encode_samples_A' defined but not used [-Wunused-function]
BUILDSTDERR:  static char *ztr_encode_samples_A(ztr_t *z,
BUILDSTDERR:               ^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: ztr.c: In function 'mfread_ztr':
BUILDSTDERR: ztr.c:335:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:      while (chunk = ztr_read_chunk_hdr(fp)) {
BUILDSTDERR:             ^~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c deflate_interlaced.c  -fPIC -DPIC -o .libs/libstaden_read_la-deflate_interlaced.o
BUILDSTDERR: deflate_interlaced.c: In function 'calc_bit_lengths':
BUILDSTDERR: deflate_interlaced.c:516:9: warning: variable 'map' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      int map[258];
BUILDSTDERR:          ^~~
BUILDSTDERR: deflate_interlaced.c: In function 'huffman_multi_decode':
BUILDSTDERR: deflate_interlaced.c:1760:9: warning: variable 'nc' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      int nc;
BUILDSTDERR:          ^~
BUILDSTDERR: deflate_interlaced.c:1759:23: warning: variable 'c' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      huffman_codes_t **c;
BUILDSTDERR:                        ^
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-fpoint.lo `test -f 'fpoint.c' || echo './'`fpoint.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOABI.lo `test -f 'seqIOABI.c' || echo './'`seqIOABI.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c fpoint.c  -fPIC -DPIC -o .libs/libstaden_read_la-fpoint.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOALF.lo `test -f 'seqIOALF.c' || echo './'`seqIOALF.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-ctfCompress.lo `test -f 'ctfCompress.c' || echo './'`ctfCompress.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOABI.c  -fPIC -DPIC -o .libs/libstaden_read_la-seqIOABI.o
BUILDSTDERR: seqIOABI.c: In function 'getABIString':
BUILDSTDERR: seqIOABI.c:259:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:      if (off = getABIIndexEntryLW(fp, indexO, label, count, 4, &len)) {
BUILDSTDERR:          ^~~
BUILDSTDERR: seqIOABI.c: In function 'mfread_abi':
BUILDSTDERR: seqIOABI.c:657:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:    if (p = strchr(commstrp, '\n'))
BUILDSTDERR:        ^
BUILDSTDERR: seqIOABI.c:662:14: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:       } while(commstrp = p);
BUILDSTDERR:               ^~~~~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOALF.c  -fPIC -DPIC -o .libs/libstaden_read_la-seqIOALF.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c ctfCompress.c  -fPIC -DPIC -o .libs/libstaden_read_la-ctfCompress.o
BUILDSTDERR: ctfCompress.c: In function 'ctfCompress2':
BUILDSTDERR: ctfCompress.c:270:80: warning: format '%d' expects argument of type 'int', but argument 7 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
BUILDSTDERR:    printf ("compress2 : %d zeros in %d bytes, %d < 7 , %d byte, %d short total %d char for %d shrt\n",
BUILDSTDERR:                                                                                ~^
BUILDSTDERR:                                                                                %ld
BUILDSTDERR: ctfCompress.c:270:92: warning: format '%d' expects argument of type 'int', but argument 8 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
BUILDSTDERR:    printf ("compress2 : %d zeros in %d bytes, %d < 7 , %d byte, %d short total %d char for %d shrt\n",
BUILDSTDERR:                                                                                            ~^
BUILDSTDERR:                                                                                            %ld
BUILDSTDERR: ctfCompress.c: In function 'ctfCompress3':
BUILDSTDERR: ctfCompress.c:607:116: warning: format '%d' expects argument of type 'int', but argument 8 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
BUILDSTDERR:      printf (" // compress3:\n//  %d zeros in %d bytes, %d values coded in %d byte, %d bytes, %d short. \n// Total %d char for %d shrt\n",
BUILDSTDERR:                                                                                                                    ~^
BUILDSTDERR:                                                                                                                    %ld
BUILDSTDERR: ctfCompress.c:607:128: warning: format '%d' expects argument of type 'int', but argument 9 has type 'size_t' {aka 'long unsigned int'} [-Wformat=]
BUILDSTDERR:      printf (" // compress3:\n//  %d zeros in %d bytes, %d values coded in %d byte, %d bytes, %d short. \n// Total %d char for %d shrt\n",
BUILDSTDERR:                                                                                                                                ~^
BUILDSTDERR:                                                                                                                                %ld
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOCTF.lo `test -f 'seqIOCTF.c' || echo './'`seqIOCTF.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-expFileIO.lo `test -f 'expFileIO.c' || echo './'`expFileIO.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-seqIOPlain.lo `test -f 'seqIOPlain.c' || echo './'`seqIOPlain.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOCTF.c  -fPIC -DPIC -o .libs/libstaden_read_la-seqIOCTF.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c expFileIO.c  -fPIC -DPIC -o .libs/libstaden_read_la-expFileIO.o
BUILDSTDERR: expFileIO.c: In function 'exp_print_mline':
BUILDSTDERR: expFileIO.c:198:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:      if (c = strchr(p, '\n'))
BUILDSTDERR:          ^
BUILDSTDERR: expFileIO.c:207:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:   if (c = strchr(p, '\n')) {
BUILDSTDERR:       ^
BUILDSTDERR: expFileIO.c: In function 'opos2str':
BUILDSTDERR: expFileIO.c:393:5: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
BUILDSTDERR:   if (dir == 0)
BUILDSTDERR:      ^
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-misc_scf.lo `test -f 'misc_scf.c' || echo './'`misc_scf.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c seqIOPlain.c  -fPIC -DPIC -o .libs/libstaden_read_la-seqIOPlain.o
BUILDSTDERR: seqIOPlain.c: In function 'mfread_pln':
BUILDSTDERR: seqIOPlain.c:150:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:        if (p = strchr(type, ' '))
BUILDSTDERR:            ^
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c misc_scf.c  -fPIC -DPIC -o .libs/libstaden_read_la-misc_scf.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-read_scf.lo `test -f 'read_scf.c' || echo './'`read_scf.c
BUILDSTDERR: In file included from misc_scf.c:33:
BUILDSTDERR: misc_scf.c: In function 'is_scf':
BUILDSTDERR: ../io_lib/scf.h:45:50: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
BUILDSTDERR:  #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
BUILDSTDERR:                                                   ^~
BUILDSTDERR: misc_scf.c:151:19: note: in expansion of macro 'SCF_MAGIC'
BUILDSTDERR:       ok = (magic==SCF_MAGIC);
BUILDSTDERR:                    ^~~~~~~~~
BUILDSTDERR: ../io_lib/scf.h:45:66: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
BUILDSTDERR:  #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
BUILDSTDERR:                                                                   ^~
BUILDSTDERR: misc_scf.c:151:19: note: in expansion of macro 'SCF_MAGIC'
BUILDSTDERR:       ok = (magic==SCF_MAGIC);
BUILDSTDERR:                    ^~~~~~~~~
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-write_scf.lo `test -f 'write_scf.c' || echo './'`write_scf.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c read_scf.c  -fPIC -DPIC -o .libs/libstaden_read_la-read_scf.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-sff.lo `test -f 'sff.c' || echo './'`sff.c
BUILDSTDERR: In file included from ../io_lib/Read.h:44,
BUILDSTDERR:                  from read_scf.c:46:
BUILDSTDERR: read_scf.c: In function 'read_scf_header':
BUILDSTDERR: ../io_lib/scf.h:45:50: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
BUILDSTDERR:  #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
BUILDSTDERR:                                                   ^~
BUILDSTDERR: read_scf.c:67:28: note: in expansion of macro 'SCF_MAGIC'
BUILDSTDERR:      if (h->magic_number != SCF_MAGIC)                     return -1;
BUILDSTDERR:                             ^~~~~~~~~
BUILDSTDERR: ../io_lib/scf.h:45:66: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
BUILDSTDERR:  #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
BUILDSTDERR:                                                                   ^~
BUILDSTDERR: read_scf.c:67:28: note: in expansion of macro 'SCF_MAGIC'
BUILDSTDERR:      if (h->magic_number != SCF_MAGIC)                     return -1;
BUILDSTDERR:                             ^~~~~~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c write_scf.c  -fPIC -DPIC -o .libs/libstaden_read_la-write_scf.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-srf.lo `test -f 'srf.c' || echo './'`srf.c
BUILDSTDERR: In file included from write_scf.c:60:
BUILDSTDERR: write_scf.c: In function 'mfwrite_scf':
BUILDSTDERR: ../io_lib/scf.h:45:50: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
BUILDSTDERR:  #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
BUILDSTDERR:                                                   ^~
BUILDSTDERR: write_scf.c:389:32: note: in expansion of macro 'SCF_MAGIC'
BUILDSTDERR:      scf->header.magic_number = SCF_MAGIC;
BUILDSTDERR:                                 ^~~~~~~~~
BUILDSTDERR: ../io_lib/scf.h:45:66: warning: suggest parentheses around '+' inside '<<' [-Wparentheses]
BUILDSTDERR:  #define SCF_MAGIC (((((uint_4)'.'<<8)+(uint_4)'s'<<8)+(uint_4)'c'<<8)+(uint_4)'f')
BUILDSTDERR:                                                                   ^~
BUILDSTDERR: write_scf.c:389:32: note: in expansion of macro 'SCF_MAGIC'
BUILDSTDERR:      scf->header.magic_number = SCF_MAGIC;
BUILDSTDERR:                                 ^~~~~~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c sff.c  -fPIC -DPIC -o .libs/libstaden_read_la-sff.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-array.lo `test -f 'array.c' || echo './'`array.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf.c  -fPIC -DPIC -o .libs/libstaden_read_la-srf.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-compress.lo `test -f 'compress.c' || echo './'`compress.c
BUILDSTDERR: srf.c: In function 'get_hi_bits':
BUILDSTDERR: srf.c:1106:59: warning: suggest parentheses around '-' in operand of '&' [-Wparentheses]
BUILDSTDERR:      val = (block->data[block->byte]) & (1<<(8-block->bit))-1;
BUILDSTDERR:                                         ~~~~~~~~~~~~~~~~~~~^~
BUILDSTDERR: srf.c:1126:21: warning: suggest parentheses around '-' in operand of '&' [-Wparentheses]
BUILDSTDERR:   & (1<<(nbits-bnum))-1;
BUILDSTDERR:     ~~~~~~~~~~~~~~~~~^~
BUILDSTDERR: srf.c: In function 'pack_trace_suffix':
BUILDSTDERR: srf.c:1383:10: warning: variable 'width' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:       int width = 0;
BUILDSTDERR:           ^~~~~
BUILDSTDERR: srf.c: In function 'partial_decode_ztr':
BUILDSTDERR: srf.c:1604:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:      while (chunk = ztr_read_chunk_hdr(mf)) {
BUILDSTDERR:             ^~~~~
BUILDSTDERR: srf.c: In function 'srf_find_trace':
BUILDSTDERR: srf.c:2025:6: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:       fread(dpos, 1, item_sz, srf->fp);
BUILDSTDERR:       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c array.c  -fPIC -DPIC -o .libs/libstaden_read_la-array.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-error.lo `test -f 'error.c' || echo './'`error.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-files.lo `test -f 'files.c' || echo './'`files.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c compress.c  -fPIC -DPIC -o .libs/libstaden_read_la-compress.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c error.c  -fPIC -DPIC -o .libs/libstaden_read_la-error.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c files.c  -fPIC -DPIC -o .libs/libstaden_read_la-files.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-find.lo `test -f 'find.c' || echo './'`find.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-mach-io.lo `test -f 'mach-io.c' || echo './'`mach-io.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-open_trace_file.lo `test -f 'open_trace_file.c' || echo './'`open_trace_file.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c find.c  -fPIC -DPIC -o .libs/libstaden_read_la-find.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-read_alloc.lo `test -f 'read_alloc.c' || echo './'`read_alloc.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c mach-io.c  -fPIC -DPIC -o .libs/libstaden_read_la-mach-io.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c open_trace_file.c  -fPIC -DPIC -o .libs/libstaden_read_la-open_trace_file.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-strings.lo `test -f 'strings.c' || echo './'`strings.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-traceType.lo `test -f 'traceType.c' || echo './'`traceType.c
BUILDSTDERR: open_trace_file.c: In function 'find_file_tar':
BUILDSTDERR: open_trace_file.c:143:7: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:    if (cp = strchr(path, '\n'))
BUILDSTDERR:        ^~
BUILDSTDERR: open_trace_file.c: In function 'sff_hash_query':
BUILDSTDERR: open_trace_file.c:537:14: warning: assignment to 'FILE **' {aka 'struct _IO_FILE **'} from incompatible pointer type 'FILE *' {aka 'struct _IO_FILE *'} [-Wincompatible-pointer-types]
BUILDSTDERR:       hf->afp = hf->hfp = NULL; /* will be closed by our parent */
BUILDSTDERR:               ^
BUILDSTDERR: open_trace_file.c:530:18: warning: variable 'fp_copy' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      static FILE *fp_copy = NULL;
BUILDSTDERR:                   ^~~~~~~
BUILDSTDERR: open_trace_file.c: In function 'find_file_sff':
BUILDSTDERR: open_trace_file.c:748:14: warning: variable 'nkey' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      uint32_t nkey, nflows, chdrlen, rhdrlen, dlen, magic;
BUILDSTDERR:               ^~~~
BUILDSTDERR: open_trace_file.c: In function 'find_file_dir':
BUILDSTDERR: open_trace_file.c:914:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:      if (cp = strrchr(file, '/')) {
BUILDSTDERR:          ^~
BUILDSTDERR: open_trace_file.c: In function 'open_path_mfile':
BUILDSTDERR: open_trace_file.c:1087:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:   if (cp = strrchr(relative_path, '/'))
BUILDSTDERR:       ^~
BUILDSTDERR: open_trace_file.c:1089:6: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:   if (fp = find_file_dir(file, relative_path))
BUILDSTDERR:       ^~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c read_alloc.c  -fPIC -DPIC -o .libs/libstaden_read_la-read_alloc.o
BUILDSTDERR: open_trace_file.c: In function 'find_file_sff':
BUILDSTDERR: open_trace_file.c:798:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(index_format, 1, 8, fp);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: open_trace_file.c: In function 'find_file_dir':
BUILDSTDERR: open_trace_file.c:929:6: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:       fread(magic, 1, 4, fp);
BUILDSTDERR:       ^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: open_trace_file.c:940:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    fread(magic, 1, 8, fp);
BUILDSTDERR:    ^~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: open_trace_file.c:950:3: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:    fread(magic, 1, 5, fp);
BUILDSTDERR:    ^~~~~~~~~~~~~~~~~~~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c strings.c  -fPIC -DPIC -o .libs/libstaden_read_la-strings.o
BUILDSTDERR: open_trace_file.c: In function 'sff_sorted_query':
BUILDSTDERR: open_trace_file.c:704:5: warning: 'offset' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:      fseek(fp, offset, SEEK_SET);
BUILDSTDERR:      ^~~~~~~~~~~~~~~~~~~~~~~~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c traceType.c  -fPIC -DPIC -o .libs/libstaden_read_la-traceType.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-xalloc.lo `test -f 'xalloc.c' || echo './'`xalloc.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-vlen.lo `test -f 'vlen.c' || echo './'`vlen.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-hash_table.lo `test -f 'hash_table.c' || echo './'`hash_table.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c vlen.c  -fPIC -DPIC -o .libs/libstaden_read_la-vlen.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c xalloc.c  -fPIC -DPIC -o .libs/libstaden_read_la-xalloc.o
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-jenkins_lookup3.lo `test -f 'jenkins_lookup3.c' || echo './'`jenkins_lookup3.c
BUILDSTDERR: vlen.c: In function 'vflen':
BUILDSTDERR: vlen.c:86:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:       for(; c=*++cp;) {
BUILDSTDERR:             ^
BUILDSTDERR: vlen.c:57:9: warning: variable 'i' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      int i;
BUILDSTDERR:          ^
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-mFILE.lo `test -f 'mFILE.c' || echo './'`mFILE.c
/bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c -o libstaden_read_la-pooled_alloc.lo `test -f 'pooled_alloc.c' || echo './'`pooled_alloc.c
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_table.c  -fPIC -DPIC -o .libs/libstaden_read_la-hash_table.o
BUILDSTDERR: hash_table.c: In function 'HashFileFopen':
BUILDSTDERR: hash_table.c:1140:6: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:       fread(hf->archives[i], 1, fnamelen, fp);
BUILDSTDERR:       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c:1156:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(&hf->headers[i].pos,  8, 1, hf->hfp);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c:1157:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(&hf->headers[i].size, 4, 1, hf->hfp);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c:1169:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(&hf->footers[i].pos,  8, 1, hf->hfp);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c:1170:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(&hf->footers[i].size, 4, 1, hf->hfp);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c: In function 'HashFileQuery':
BUILDSTDERR: hash_table.c:1368:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(k, klen, 1, hf->hfp);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c:1369:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(&headfoot, 1, 1, hf->hfp);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c:1372:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(&pos, 8, 1, hf->hfp);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c:1376:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(&size, 4, 1, hf->hfp);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c: In function 'HashFileExtract':
BUILDSTDERR: hash_table.c:1506:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(&data[pos], head->size, 1, hf->afp[head->archive_no]);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c:1516:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:      fread(&data[pos], hfi.size, 1, hf->afp[hfi.archive]);
BUILDSTDERR:      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_table.c:1526:2: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   fread(&data[pos], foot->size, 1, hf->afp[foot->archive_no]);
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c jenkins_lookup3.c  -fPIC -DPIC -o .libs/libstaden_read_la-jenkins_lookup3.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c mFILE.c  -fPIC -DPIC -o .libs/libstaden_read_la-mFILE.o
 gcc -DHAVE_CONFIG_H -I. -I. -I.. -I.. -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c pooled_alloc.c  -fPIC -DPIC -o .libs/libstaden_read_la-pooled_alloc.o
BUILDSTDERR: jenkins_lookup3.c:654:17: warning: 'hashbig' defined but not used [-Wunused-function]
BUILDSTDERR:  static uint32_t hashbig( const void *key, size_t length, uint32_t initval)
BUILDSTDERR:                  ^~~~~~~
BUILDSTDERR: jenkins_lookup3.c:288:17: warning: 'hashlittle' defined but not used [-Wunused-function]
BUILDSTDERR:  static uint32_t hashlittle( const void *key, size_t length, uint32_t initval)
BUILDSTDERR:                  ^~~~~~~~~~
BUILDSTDERR: jenkins_lookup3.c:223:13: warning: 'hashword2' defined but not used [-Wunused-function]
BUILDSTDERR:  static void hashword2 (
BUILDSTDERR:              ^~~~~~~~~
BUILDSTDERR: jenkins_lookup3.c:179:17: warning: 'hashword' defined but not used [-Wunused-function]
BUILDSTDERR:  static uint32_t hashword(
BUILDSTDERR:                  ^~~~~~~~
BUILDSTDERR: pooled_alloc.c: In function 'new_pool':
BUILDSTDERR: pooled_alloc.c:37:11: warning: unused variable 'cp' [-Wunused-variable]
BUILDSTDERR:      char *cp;
BUILDSTDERR:            ^~
BUILDSTDERR: pooled_alloc.c:35:12: warning: unused variable 'i' [-Wunused-variable]
BUILDSTDERR:      size_t i, n = PSIZE / p->dsize;
BUILDSTDERR:             ^
BUILDSTDERR: pooled_alloc.c: In function 'pool_alloc':
BUILDSTDERR: pooled_alloc.c:65:12: warning: unused variable 'i' [-Wunused-variable]
BUILDSTDERR:      size_t i;
BUILDSTDERR:             ^
BUILDSTDERR: pooled_alloc.c: In function 'pool_free':
BUILDSTDERR: pooled_alloc.c:95:19: warning: unused variable 'i' [-Wunused-variable]
BUILDSTDERR:      size_t psize, i;
BUILDSTDERR:                    ^
BUILDSTDERR: pooled_alloc.c:95:12: warning: unused variable 'psize' [-Wunused-variable]
BUILDSTDERR:      size_t psize, i;
BUILDSTDERR:             ^~~~~
BUILDSTDERR: mFILE.c: In function 'mfreopen':
BUILDSTDERR: mFILE.c:194:16: warning: variable 'w' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      int r = 0, w = 0, a = 0, b = 0, x = 0, mode = 0;
BUILDSTDERR:                 ^
BUILDSTDERR: mFILE.c: In function 'mfflush':
BUILDSTDERR: mFILE.c:487:10: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses]
BUILDSTDERR:       if (!mf->mode & MF_MODEX)
BUILDSTDERR:           ^~~~~~~~~
BUILDSTDERR: mFILE.c:493:2: warning: ignoring return value of 'ftruncate', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:   ftruncate(fileno(mf->fp), ftell(mf->fp));
BUILDSTDERR:   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libstaden-read.la -rpath /usr/lib64 -version-info 2:2:1  libstaden_read_la-Read.lo libstaden_read_la-scf_extras.lo libstaden_read_la-translate.lo libstaden_read_la-compression.lo libstaden_read_la-ztr.lo libstaden_read_la-ztr_translate.lo libstaden_read_la-deflate_interlaced.lo libstaden_read_la-fpoint.lo libstaden_read_la-seqIOABI.lo libstaden_read_la-seqIOALF.lo libstaden_read_la-ctfCompress.lo libstaden_read_la-seqIOCTF.lo libstaden_read_la-expFileIO.lo libstaden_read_la-seqIOPlain.lo libstaden_read_la-misc_scf.lo libstaden_read_la-read_scf.lo libstaden_read_la-write_scf.lo libstaden_read_la-sff.lo libstaden_read_la-srf.lo libstaden_read_la-array.lo libstaden_read_la-compress.lo libstaden_read_la-error.lo libstaden_read_la-files.lo libstaden_read_la-find.lo libstaden_read_la-mach-io.lo libstaden_read_la-open_trace_file.lo libstaden_read_la-read_alloc.lo libstaden_read_la-strings.lo libstaden_read_la-traceType.lo libstaden_read_la-xalloc.lo libstaden_read_la-vlen.lo libstaden_read_la-hash_table.lo libstaden_read_la-jenkins_lookup3.lo libstaden_read_la-mFILE.lo libstaden_read_la-pooled_alloc.lo -lz  -lcurl -lm 
gcc -shared  .libs/libstaden_read_la-Read.o .libs/libstaden_read_la-scf_extras.o .libs/libstaden_read_la-translate.o .libs/libstaden_read_la-compression.o .libs/libstaden_read_la-ztr.o .libs/libstaden_read_la-ztr_translate.o .libs/libstaden_read_la-deflate_interlaced.o .libs/libstaden_read_la-fpoint.o .libs/libstaden_read_la-seqIOABI.o .libs/libstaden_read_la-seqIOALF.o .libs/libstaden_read_la-ctfCompress.o .libs/libstaden_read_la-seqIOCTF.o .libs/libstaden_read_la-expFileIO.o .libs/libstaden_read_la-seqIOPlain.o .libs/libstaden_read_la-misc_scf.o .libs/libstaden_read_la-read_scf.o .libs/libstaden_read_la-write_scf.o .libs/libstaden_read_la-sff.o .libs/libstaden_read_la-srf.o .libs/libstaden_read_la-array.o .libs/libstaden_read_la-compress.o .libs/libstaden_read_la-error.o .libs/libstaden_read_la-files.o .libs/libstaden_read_la-find.o .libs/libstaden_read_la-mach-io.o .libs/libstaden_read_la-open_trace_file.o .libs/libstaden_read_la-read_alloc.o .libs/libstaden_read_la-strings.o .libs/libstaden_read_la-traceType.o .libs/libstaden_read_la-xalloc.o .libs/libstaden_read_la-vlen.o .libs/libstaden_read_la-hash_table.o .libs/libstaden_read_la-jenkins_lookup3.o .libs/libstaden_read_la-mFILE.o .libs/libstaden_read_la-pooled_alloc.o  -lz -lcurl -lm -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libstaden-read.so.1 -o .libs/libstaden-read.so.1.1.2
(cd .libs && rm -f libstaden-read.so.1 && ln -s libstaden-read.so.1.1.2 libstaden-read.so.1)
(cd .libs && rm -f libstaden-read.so && ln -s libstaden-read.so.1.1.2 libstaden-read.so)
creating libstaden-read.la
(cd .libs && rm -f libstaden-read.la && ln -s ../libstaden-read.la libstaden-read.la)
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
Making all in progs
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c convert_trace.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c makeSCF.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c extract_seq.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c extract_qual.c
BUILDSTDERR: extract_seq.c: In function 'main':
BUILDSTDERR: extract_seq.c:199:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:        if (cp = strchr(line, '\n'))
BUILDSTDERR:            ^~
BUILDSTDERR: extract_qual.c: In function 'main':
BUILDSTDERR: extract_qual.c:317:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:        if (cp = strchr(line, '\n'))
BUILDSTDERR:            ^~
BUILDSTDERR: convert_trace.c:16:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=]
BUILDSTDERR:  static char const rcsid[] = "$Id: convert_trace.c,v 1.12 2008-02-20 16:07:44 jkbonfield Exp $";
BUILDSTDERR:                    ^~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c extract_fastq.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c index_tar.c
BUILDSTDERR: extract_fastq.c: In function 'main':
BUILDSTDERR: extract_fastq.c:141:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:        if (cp = strchr(line, '\n'))
BUILDSTDERR:            ^~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_dump.c
BUILDSTDERR: index_tar.c: In function 'main':
BUILDSTDERR: index_tar.c:72:21: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:                      fread(member, 1, size > 256 ? 256 : size, fp);
BUILDSTDERR:                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: index_tar.c:82:17: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:                  fread(member, 1, size > 256 ? 256 : size, fp);
BUILDSTDERR:                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: convert_trace.c: In function 'main':
BUILDSTDERR: convert_trace.c:743:23: warning: '%s' directive writing up to 8191 bytes into a region of size 2042 [-Wformat-overflow=]
BUILDSTDERR: convert_trace.c:724:16:
BUILDSTDERR:       infname = line2;
BUILDSTDERR:                 ~~~~~   
BUILDSTDERR: convert_trace.c:743:23:
BUILDSTDERR:    sprintf(buf, "ERROR %s", infname);
BUILDSTDERR:                        ^~
BUILDSTDERR: In file included from /usr/include/stdio.h:861,
BUILDSTDERR:                  from convert_trace.c:5:
BUILDSTDERR: /usr/include/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 7 and 8198 bytes into a destination of size 2048
BUILDSTDERR:    return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
BUILDSTDERR:           ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR:        __bos (__s), __fmt, __va_arg_pack ());
BUILDSTDERR:        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_info.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c scf_update.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c get_comment.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_tar.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_extract.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_list.c
BUILDSTDERR: hash_tar.c: In function 'load_map':
BUILDSTDERR: hash_tar.c:78:5: warning: implicit declaration of function 'close'; did you mean 'pclose'? [-Wimplicit-function-declaration]
BUILDSTDERR:      close(fp);
BUILDSTDERR:      ^~~~~
BUILDSTDERR:      pclose
BUILDSTDERR: hash_tar.c: In function 'main':
BUILDSTDERR: hash_tar.c:273:11: warning: unused variable 'fp' [-Wunused-variable]
BUILDSTDERR:      FILE *fp;
BUILDSTDERR:            ^~
BUILDSTDERR: hash_tar.c: In function 'accumulate':
BUILDSTDERR: hash_tar.c:136:21: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:                      fread(member, 1, size > 256 ? 256 : size, fp);
BUILDSTDERR:                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_tar.c:146:17: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:                  fread(member, 1, size > 256 ? 256 : size, fp);
BUILDSTDERR:                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_tar.c:204:1: warning: control reaches end of non-void function [-Wreturn-type]
BUILDSTDERR:  }
BUILDSTDERR:  ^
BUILDSTDERR: hash_extract.c: In function 'extract':
BUILDSTDERR: hash_extract.c:20:9: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:      if (data = HashFileExtract(hf, file, &len)) {
BUILDSTDERR:          ^~~~
BUILDSTDERR: hash_extract.c: In function 'main':
BUILDSTDERR: hash_extract.c:74:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:       if (c = strchr(file, '\n'))
BUILDSTDERR:           ^
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c trace_dump.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c hash_sff.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c append_sff.c
BUILDSTDERR: hash_tar.c: In function 'main':
BUILDSTDERR: hash_tar.c:327:13: warning: 'hf' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:    realloc(hf->headers, (hf->nheaders+1) *
BUILDSTDERR:            ~~^~~~~~~~~
BUILDSTDERR: append_sff.c: In function 'main':
BUILDSTDERR: append_sff.c:116:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:      fread(chdr, 1, 31, fpout);
BUILDSTDERR:      ^~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_sff.c: In function 'main':
BUILDSTDERR: hash_sff.c:207:13: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:       while (len = fread(block, 1, 8192, fp)) {
BUILDSTDERR:              ^~~
BUILDSTDERR: hash_sff.c:230:6: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:       fread(hdr, 1, 31, fp);
BUILDSTDERR:       ^~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: hash_sff.c:258:6: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:       fread(hdr, 1, 31, fpout);
BUILDSTDERR:       ^~~~~~~~~~~~~~~~~~~~~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c ztr_dump.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_dump_all.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_index_hash.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_extract_linear.c
BUILDSTDERR: srf_dump_all.c: In function 'dump_solexa':
BUILDSTDERR: srf_dump_all.c:309:50: warning: pointer targets in passing argument 3 of 'dump_conf4_solexa' differ in signedness [-Wpointer-sign]
BUILDSTDERR:   dump_conf4_solexa(files[1], seq, chunks[0]->data+1, chunks[0]->dlength-1);
BUILDSTDERR:                                    ~~~~~~~~~~~~~~~^~
BUILDSTDERR: srf_dump_all.c:227:6: note: expected 'signed char *' but argument is of type 'char *'
BUILDSTDERR:  void dump_conf4_solexa(FILE *fp, char *seq, signed char *bytes, int nbytes) {
BUILDSTDERR:       ^~~~~~~~~~~~~~~~~
BUILDSTDERR: srf_dump_all.c:320:25: warning: pointer targets in passing argument 7 of 'dump_samples4_solexa' differ in signedness [-Wpointer-sign]
BUILDSTDERR:           chunks[i]->data+2, chunks[i]->dlength-2);
BUILDSTDERR:           ~~~~~~~~~~~~~~~^~
BUILDSTDERR: srf_dump_all.c:194:6: note: expected 'unsigned char *' but argument is of type 'char *'
BUILDSTDERR:  void dump_samples4_solexa(FILE *fp, int lane, int tile, int x, int y,
BUILDSTDERR:       ^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: srf_dump_all.c:333:25: warning: pointer targets in passing argument 7 of 'dump_samples4_solexa' differ in signedness [-Wpointer-sign]
BUILDSTDERR:           chunks[i]->data+2, chunks[i]->dlength-2);
BUILDSTDERR:           ~~~~~~~~~~~~~~~^~
BUILDSTDERR: srf_dump_all.c:194:6: note: expected 'unsigned char *' but argument is of type 'char *'
BUILDSTDERR:  void dump_samples4_solexa(FILE *fp, int lane, int tile, int x, int y,
BUILDSTDERR:       ^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: srf_dump_all.c:346:25: warning: pointer targets in passing argument 7 of 'dump_samples4_solexa' differ in signedness [-Wpointer-sign]
BUILDSTDERR:           chunks[i]->data+2, chunks[i]->dlength-2);
BUILDSTDERR:           ~~~~~~~~~~~~~~~^~
BUILDSTDERR: srf_dump_all.c:194:6: note: expected 'unsigned char *' but argument is of type 'char *'
BUILDSTDERR:  void dump_samples4_solexa(FILE *fp, int lane, int tile, int x, int y,
BUILDSTDERR:       ^~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: srf_dump_all.c: In function 'read_filter_from_file':
BUILDSTDERR: srf_dump_all.c:484:11: warning: variable 'lStartPos' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      long  lStartPos;              /* Offset of start of current line */
BUILDSTDERR:            ^~~~~~~~~
BUILDSTDERR: srf_dump_all.c:483:11: warning: variable 'lLineLen' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      long  lLineLen;               /* Current line length */
BUILDSTDERR:            ^~~~~~~~
BUILDSTDERR: srf_dump_all.c:506:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:      fread(cFile, lFileLen, 1, input); /* Read the entire file into cFile */
BUILDSTDERR:      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: srf_index_hash.c: In function 'main':
BUILDSTDERR: srf_index_hash.c:138:5: warning: ignoring return value of 'ftruncate', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:      ftruncate(fileno(srf->fp), ftello(srf->fp));
BUILDSTDERR:      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_extract_hash.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf2fastq.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf2fasta.c
BUILDSTDERR: srf2fastq.c: In function 'ztr2fastq':
BUILDSTDERR: srf2fastq.c:369:17: warning: variable 'start' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:              int start, length;
BUILDSTDERR:                  ^~~~~
BUILDSTDERR: srf2fastq.c:480:21: warning: variable 'start' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:                  int start, length;
BUILDSTDERR:                      ^~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_filter.c
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_info.c
BUILDSTDERR: srf2fastq.c:248:13: warning: 'regn' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:      regn_t *regn;
BUILDSTDERR:              ^~~~
BUILDSTDERR: srf_filter.c: In function 'read_filter_from_file':
BUILDSTDERR: srf_filter.c:164:11: warning: variable 'lStartPos' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      long  lStartPos;              /* Offset of start of current line */
BUILDSTDERR:            ^~~~~~~~~
BUILDSTDERR: srf_filter.c:163:11: warning: variable 'lLineLen' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      long  lLineLen;               /* Current line length */
BUILDSTDERR:            ^~~~~~~~
BUILDSTDERR: srf_filter.c: In function 'dump_read_filter':
BUILDSTDERR: srf_filter.c:457:33: warning: format '%d' expects argument of type 'int', but argument 2 has type 'uint64_t' {aka 'long unsigned int'} [-Wformat=]
BUILDSTDERR:                  printf("\tread[%d] = %s\n", hi->data.i, hi->key);
BUILDSTDERR:                                 ~^           ~~~~~~~~~~
BUILDSTDERR:                                 %ld
BUILDSTDERR: srf_filter.c: In function 'add_readpair_region':
BUILDSTDERR: srf_filter.c:587:16: warning: pointer targets in assignment from 'unsigned char *' to 'char *' differ in signedness [-Wpointer-sign]
BUILDSTDERR:      c.data     = data;
BUILDSTDERR:                 ^
BUILDSTDERR: srf_filter.c: In function 'srf_filter':
BUILDSTDERR: srf_filter.c:699:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:    while (chunk = ztr_read_chunk_hdr(in_srf->mf)) {
BUILDSTDERR:           ^~~~~
BUILDSTDERR: srf_filter.c:788:23: warning: left-hand operand of comma expression has no effect [-Wunused-value]
BUILDSTDERR:                  stderr, "Error making trace header.\nExiting.\n";
BUILDSTDERR:                        ^
BUILDSTDERR: srf_filter.c:788:23: warning: statement with no effect [-Wunused-value]
BUILDSTDERR: srf_filter.c:794:66: warning: pointer targets in passing argument 3 of 'srf_construct_trace_hdr' differ in signedness [-Wpointer-sign]
BUILDSTDERR:       srf_construct_trace_hdr(&out_srf->th, in_srf->th.id_prefix, trace_hdr, trace_hdr_size);
BUILDSTDERR:                                                                   ^~~~~~~~~
BUILDSTDERR: In file included from srf_filter.c:47:
BUILDSTDERR: ../io_lib/srf.h:144:18: note: expected 'unsigned char *' but argument is of type 'char *'
BUILDSTDERR:  srf_trace_hdr_t *srf_construct_trace_hdr(srf_trace_hdr_t *th,
BUILDSTDERR:                   ^~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: srf_filter.c:894:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:    while (chunk = ztr_read_chunk_hdr(in_srf->mf)) {
BUILDSTDERR:           ^~~~~
BUILDSTDERR: srf_filter.c:980:78: warning: pointer targets in passing argument 4 of 'srf_construct_trace_body' differ in signedness [-Wpointer-sign]
BUILDSTDERR:    srf_construct_trace_body(&new_tb, name+strlen(in_srf->th.id_prefix), -1, mf->data, mf->size, old_tb.flags);
BUILDSTDERR:                                                                             ~~^~~~~~
BUILDSTDERR: In file included from srf_filter.c:47:
BUILDSTDERR: ../io_lib/srf.h:152:19: note: expected 'unsigned char *' but argument is of type 'char *'
BUILDSTDERR:  srf_trace_body_t *srf_construct_trace_body(srf_trace_body_t *th,
BUILDSTDERR:                    ^~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: srf_filter.c: In function 'read_filter_from_file':
BUILDSTDERR: srf_filter.c:186:5: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
BUILDSTDERR:      fread(cFile, lFileLen, 1, input); /* Read the entire file into cFile */
BUILDSTDERR:      ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BUILDSTDERR: srf_info.c: In function 'partial_decode_ztr2':
BUILDSTDERR: srf_info.c:411:12: warning: suggest parentheses around assignment used as truth value [-Wparentheses]
BUILDSTDERR:      while (chunk = ztr_read_chunk_hdr(mf)) {
BUILDSTDERR:             ^~~~~
gcc -DHAVE_CONFIG_H -I. -I. -I.. -I..    -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c srf_list.c
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o convert_trace  convert_trace.o ../io_lib/libstaden-read.la -lm 
BUILDSTDERR: srf_filter.c: In function 'srf_filter':
BUILDSTDERR: srf_filter.c:970:19: warning: 'output_trace_header' may be used uninitialized in this function [-Wmaybe-uninitialized]
BUILDSTDERR:                  if( output_trace_header ) {
BUILDSTDERR:                    ^
BUILDSTDERR: srf_list.c: In function 'count_file':
BUILDSTDERR: srf_list.c:75:19: warning: unused variable 'data' [-Wunused-variable]
BUILDSTDERR:      unsigned char data[16];
BUILDSTDERR:                    ^~~~
BUILDSTDERR: srf_list.c:74:22: warning: unused variable 'i' [-Wunused-variable]
BUILDSTDERR:      int item_sz = 9, i;
BUILDSTDERR:                       ^
BUILDSTDERR: srf_list.c:73:11: warning: variable 'ipos' set but not used [-Wunused-but-set-variable]
BUILDSTDERR:      off_t ipos, skip;
BUILDSTDERR:            ^~~~
BUILDSTDERR: srf_list.c:72:13: warning: unused variable 'count' [-Wunused-variable]
BUILDSTDERR:      int64_t count = 0;
BUILDSTDERR:              ^~~~~
BUILDSTDERR: srf_list.c: In function 'main':
BUILDSTDERR: srf_list.c:158:19: warning: format '%d' expects argument of type 'int', but argument 3 has type 'int64_t' {aka 'long int'} [-Wformat=]
BUILDSTDERR:       printf("%s: %d sequences\n", argv[i], c);
BUILDSTDERR:                   ~^                        ~
BUILDSTDERR:                   %ld
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o makeSCF  makeSCF.o ../io_lib/libstaden-read.la -lm 
mkdir .libs
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o extract_seq  extract_seq.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/convert_trace convert_trace.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o extract_qual  extract_qual.o ../io_lib/libstaden-read.la -lm 
creating convert_trace
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o extract_fastq  extract_fastq.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/makeSCF makeSCF.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/extract_seq extract_seq.o  ../io_lib/.libs/libstaden-read.so -lm
creating makeSCF
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o index_tar  index_tar.o  -lm 
creating extract_seq
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/extract_qual extract_qual.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o scf_dump  scf_dump.o ../io_lib/libstaden-read.la -lm 
creating extract_qual
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o scf_info  scf_info.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/extract_fastq extract_fastq.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o index_tar index_tar.o  -lm
creating extract_fastq
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o scf_update  scf_update.o ../io_lib/libstaden-read.la -lm 
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o get_comment  get_comment.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/scf_dump scf_dump.o  ../io_lib/.libs/libstaden-read.so -lm
creating scf_dump
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/scf_info scf_info.o  ../io_lib/.libs/libstaden-read.so -lm
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o hash_tar  hash_tar.o ../io_lib/libstaden-read.la -lm 
creating scf_info
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o hash_extract  hash_extract.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/scf_update scf_update.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/get_comment get_comment.o  ../io_lib/.libs/libstaden-read.so -lm
creating scf_update
creating get_comment
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o hash_list  hash_list.o ../io_lib/libstaden-read.la -lm 
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o trace_dump  trace_dump.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/hash_tar hash_tar.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/hash_extract hash_extract.o  ../io_lib/.libs/libstaden-read.so -lm
creating hash_tar
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o hash_sff  hash_sff.o ../io_lib/libstaden-read.la -lm 
creating hash_extract
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o append_sff  append_sff.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/hash_list hash_list.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/trace_dump trace_dump.o  ../io_lib/.libs/libstaden-read.so -lm
creating hash_list
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o ztr_dump  ztr_dump.o ../io_lib/libstaden-read.la -lm 
creating trace_dump
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_dump_all  srf_dump_all.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/hash_sff hash_sff.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/append_sff append_sff.o  ../io_lib/.libs/libstaden-read.so -lm
creating hash_sff
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_index_hash  srf_index_hash.o ../io_lib/libstaden-read.la -lm 
creating append_sff
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_extract_linear  srf_extract_linear.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/ztr_dump ztr_dump.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_dump_all srf_dump_all.o  ../io_lib/.libs/libstaden-read.so -lm
creating ztr_dump
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_extract_hash  srf_extract_hash.o ../io_lib/libstaden-read.la -lm 
creating srf_dump_all
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf2fastq  srf2fastq.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_index_hash srf_index_hash.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_extract_linear srf_extract_linear.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf_index_hash
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf2fasta  srf2fasta.o ../io_lib/libstaden-read.la -lm 
creating srf_extract_linear
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_filter  srf_filter.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_extract_hash srf_extract_hash.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf2fastq srf2fastq.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf_extract_hash
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_info  srf_info.o ../io_lib/libstaden-read.la -lm 
creating srf2fastq
/bin/sh ../libtool --tag=CC --mode=link gcc  -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o srf_list  srf_list.o ../io_lib/libstaden-read.la -lm 
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf2fasta srf2fasta.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_filter srf_filter.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf2fasta
creating srf_filter
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_info srf_info.o  ../io_lib/.libs/libstaden-read.so -lm
gcc -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o .libs/srf_list srf_list.o  ../io_lib/.libs/libstaden-read.so -lm
creating srf_info
creating srf_list
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
Making all in tests
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.6x6jiw
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64
BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64
+ cd io_lib-1.12.4
+ rm -rf /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64
+ make install DESTDIR=/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64
Making install in io_lib
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
test -z "/usr/lib64" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/lib64"
 /bin/sh ../libtool --mode=install /usr/bin/install -c  'libstaden-read.la' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/lib64/libstaden-read.la'
/usr/bin/install -c .libs/libstaden-read.so.1.1.2 /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/lib64/libstaden-read.so.1.1.2
(cd /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/lib64 && { ln -s -f libstaden-read.so.1.1.2 libstaden-read.so.1 || { rm -f libstaden-read.so.1 && ln -s libstaden-read.so.1.1.2 libstaden-read.so.1; }; })
(cd /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/lib64 && { ln -s -f libstaden-read.so.1.1.2 libstaden-read.so || { rm -f libstaden-read.so && ln -s libstaden-read.so.1.1.2 libstaden-read.so; }; })
/usr/bin/install -c .libs/libstaden-read.lai /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/lib64/libstaden-read.la
BUILDSTDERR: libtool: install: warning: remember to run `libtool --finish /usr/lib64'
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/io_lib'
Making install in progs
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
test -z "/usr/bin" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin"
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'convert_trace' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/convert_trace'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/convert_trace /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/convert_trace
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'makeSCF' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/makeSCF'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/makeSCF /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/makeSCF
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'extract_seq' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/extract_seq'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/extract_seq /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/extract_seq
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'extract_qual' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/extract_qual'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/extract_qual /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/extract_qual
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'extract_fastq' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/extract_fastq'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/extract_fastq /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/extract_fastq
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'index_tar' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/index_tar'
/usr/bin/install -c index_tar /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/index_tar
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'scf_dump' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/scf_dump'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/scf_dump /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/scf_dump
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'scf_info' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/scf_info'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/scf_info /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/scf_info
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'scf_update' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/scf_update'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/scf_update /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/scf_update
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'get_comment' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/get_comment'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/get_comment /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/get_comment
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'hash_tar' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_tar'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/hash_tar /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_tar
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'hash_extract' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_extract'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/hash_extract /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_extract
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'hash_list' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_list'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/hash_list /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_list
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'trace_dump' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/trace_dump'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/trace_dump /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/trace_dump
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'hash_sff' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_sff'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/hash_sff /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_sff
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'append_sff' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/append_sff'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/append_sff /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/append_sff
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'ztr_dump' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/ztr_dump'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/ztr_dump /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/ztr_dump
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_dump_all' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_dump_all'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_dump_all /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_dump_all
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_index_hash' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_index_hash'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_index_hash /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_index_hash
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_extract_linear' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_extract_linear'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_extract_linear /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_extract_linear
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_extract_hash' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_extract_hash'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_extract_hash /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_extract_hash
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf2fastq' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf2fastq'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf2fastq /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf2fastq
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf2fasta' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf2fasta'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf2fasta /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf2fasta
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_filter' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_filter'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_filter /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_filter
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_info' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_info'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_info /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_info
  /bin/sh ../libtool --mode=install /usr/bin/install -c 'srf_list' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_list'
BUILDSTDERR: libtool: install: warning: `../io_lib/libstaden-read.la' has not been installed in `/usr/lib64'
/usr/bin/install -c .libs/srf_list /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_list
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/progs'
Making install in tests
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[2]: Nothing to be done for 'install-exec-am'.
make[2]: Nothing to be done for 'install-data-am'.
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4/tests'
make[1]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
make[2]: Entering directory '/builddir/build/BUILD/io_lib-1.12.4'
test -z "/usr/bin" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin"
 /usr/bin/install -c 'staden-io_lib-config' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/staden-io_lib-config'
test -z "/usr/share/man/man1" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man1"
 /usr/bin/install -c -m 644 './man/man1/srf_index_hash.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man1/srf_index_hash.1'
 /usr/bin/install -c -m 644 './man/man1/srf_info.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man1/srf_info.1'
 /usr/bin/install -c -m 644 './man/man1/srf_list.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man1/srf_list.1'
 /usr/bin/install -c -m 644 './man/man1/srf2fasta.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man1/srf2fasta.1'
 /usr/bin/install -c -m 644 './man/man1/srf2fastq.1' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man1/srf2fastq.1'
test -z "/usr/share/man/man3" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3"
 /usr/bin/install -c -m 644 './man/man3/read_scf_header.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/read_scf_header.3'
 /usr/bin/install -c -m 644 './man/man3/read_allocate.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/read_allocate.3'
 /usr/bin/install -c -m 644 './man/man3/ExperimentFile.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/ExperimentFile.3'
 /usr/bin/install -c -m 644 './man/man3/write_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/write_reading.3'
 /usr/bin/install -c -m 644 './man/man3/write_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/write_scf.3'
 /usr/bin/install -c -m 644 './man/man3/read_deallocate.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/read_deallocate.3'
 /usr/bin/install -c -m 644 './man/man3/fwrite_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/fwrite_reading.3'
 /usr/bin/install -c -m 644 './man/man3/read2scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/read2scf.3'
 /usr/bin/install -c -m 644 './man/man3/scf2read.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/scf2read.3'
 /usr/bin/install -c -m 644 './man/man3/fwrite_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/fwrite_scf.3'
 /usr/bin/install -c -m 644 './man/man3/write_scf_header.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/write_scf_header.3'
 /usr/bin/install -c -m 644 './man/man3/read_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/read_reading.3'
 /usr/bin/install -c -m 644 './man/man3/read_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/read_scf.3'
 /usr/bin/install -c -m 644 './man/man3/exp2read.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/exp2read.3'
 /usr/bin/install -c -m 644 './man/man3/fread_reading.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/fread_reading.3'
 /usr/bin/install -c -m 644 './man/man3/read2exp.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/read2exp.3'
 /usr/bin/install -c -m 644 './man/man3/fread_scf.3' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man3/fread_scf.3'
test -z "/usr/share/man/man4" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man4"
 /usr/bin/install -c -m 644 './man/man4/Read.4' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/man/man4/Read.4'
test -z "/usr/include/io_lib" || mkdir -p -- "/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib"
 /usr/bin/install -c -m 644 'io_lib/Read.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/Read.h'
 /usr/bin/install -c -m 644 'io_lib/scf_extras.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/scf_extras.h'
 /usr/bin/install -c -m 644 'io_lib/translate.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/translate.h'
 /usr/bin/install -c -m 644 'io_lib/abi.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/abi.h'
 /usr/bin/install -c -m 644 'io_lib/fpoint.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/fpoint.h'
 /usr/bin/install -c -m 644 'io_lib/seqIOABI.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/seqIOABI.h'
 /usr/bin/install -c -m 644 'io_lib/alf.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/alf.h'
 /usr/bin/install -c -m 644 'io_lib/seqIOCTF.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/seqIOCTF.h'
 /usr/bin/install -c -m 644 'io_lib/expFileIO.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/expFileIO.h'
 /usr/bin/install -c -m 644 'io_lib/plain.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/plain.h'
 /usr/bin/install -c -m 644 'io_lib/scf.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/scf.h'
 /usr/bin/install -c -m 644 'io_lib/sff.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/sff.h'
 /usr/bin/install -c -m 644 'io_lib/array.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/array.h'
 /usr/bin/install -c -m 644 'io_lib/compress.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/compress.h'
 /usr/bin/install -c -m 644 'io_lib/error.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/error.h'
 /usr/bin/install -c -m 644 'io_lib/mach-io.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/mach-io.h'
 /usr/bin/install -c -m 644 'io_lib/misc.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/misc.h'
 /usr/bin/install -c -m 644 'io_lib/open_trace_file.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/open_trace_file.h'
 /usr/bin/install -c -m 644 'io_lib/tar_format.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/tar_format.h'
 /usr/bin/install -c -m 644 'io_lib/traceType.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/traceType.h'
 /usr/bin/install -c -m 644 'io_lib/xalloc.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/xalloc.h'
 /usr/bin/install -c -m 644 'io_lib/mFILE.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/mFILE.h'
 /usr/bin/install -c -m 644 'io_lib/stdio_hack.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/stdio_hack.h'
 /usr/bin/install -c -m 644 'io_lib/vlen.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/vlen.h'
 /usr/bin/install -c -m 644 'io_lib/hash_table.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/hash_table.h'
 /usr/bin/install -c -m 644 'io_lib/jenkins_lookup3.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/jenkins_lookup3.h'
 /usr/bin/install -c -m 644 'io_lib/os.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/os.h'
 /usr/bin/install -c -m 644 'io_lib/compression.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/compression.h'
 /usr/bin/install -c -m 644 'io_lib/ztr.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/ztr.h'
 /usr/bin/install -c -m 644 'io_lib/deflate_interlaced.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/deflate_interlaced.h'
 /usr/bin/install -c -m 644 'io_lib/srf.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/srf.h'
 /usr/bin/install -c -m 644 'io_lib/pooled_alloc.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/pooled_alloc.h'
 /usr/bin/install -c -m 644 'io_lib_config.h' '/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/include/io_lib/io_lib_config.h'
make[2]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
make[1]: Leaving directory '/builddir/build/BUILD/io_lib-1.12.4'
+ find /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64 -name '*.la' -exec rm -f '{}' ';'
+ /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 1.12.4-14.fc29 --unique-debug-suffix -1.12.4-14.fc29.riscv64 --unique-debug-src-base staden-io_lib-1.12.4-14.fc29.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/io_lib-1.12.4
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_extract
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/ztr_dump
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_info
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_dump_all
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/convert_trace
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/extract_qual
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_sff
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/scf_info
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/scf_dump
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/index_tar
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/extract_fastq
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_index_hash
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_list
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_extract_hash
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/get_comment
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/append_sff
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_list
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/extract_seq
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_filter
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/trace_dump
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf2fasta
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/hash_tar
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf2fastq
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/makeSCF
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/scf_update
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/bin/srf_extract_linear
extracting debug info from /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/lib64/libstaden-read.so.1.1.2
/usr/lib/rpm/sepdebugcrcfix: Updated 27 CRC32s, 0 CRC32s did match.
BUILDSTDERR: 1828 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
BUILDSTDERR: /sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
Processing files: staden-io_lib-1.12.4-14.fc29.riscv64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.wZcnYT
+ umask 022
+ cd /builddir/build/BUILD
+ cd io_lib-1.12.4
+ DOCDIR=/builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/doc/staden-io_lib
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/doc/staden-io_lib
+ cp -pr README /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/doc/staden-io_lib
+ cp -pr COPYRIGHT /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/doc/staden-io_lib
+ cp -pr CHANGES /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/doc/staden-io_lib
+ cp -pr docs/ /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64/usr/share/doc/staden-io_lib
+ exit 0
Provides: libstaden-read.so.1()(64bit) staden-io_lib = 1.12.4-14.fc29 staden-io_lib(riscv-64) = 1.12.4-14.fc29
Requires(interp): /sbin/ldconfig /sbin/ldconfig
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires(post): /sbin/ldconfig
Requires(postun): /sbin/ldconfig
Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libcurl.so.4()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libstaden-read.so.1()(64bit) libz.so.1()(64bit) rtld(GNU_HASH)
Processing files: staden-io_lib-devel-1.12.4-14.fc29.riscv64
Provides: staden-io_lib-devel = 1.12.4-14.fc29 staden-io_lib-devel(riscv-64) = 1.12.4-14.fc29
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /bin/sh libstaden-read.so.1()(64bit)
Processing files: staden-io_lib-debugsource-1.12.4-14.fc29.riscv64
Provides: staden-io_lib-debugsource = 1.12.4-14.fc29 staden-io_lib-debugsource(riscv-64) = 1.12.4-14.fc29
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: staden-io_lib-debuginfo-1.12.4-14.fc29.riscv64
Provides: debuginfo(build-id) = 01bd40c7d630b1343c7b85001ebe7a7720757b29 debuginfo(build-id) = 12434bd3058c5e12b7f8344a29d539e246874125 debuginfo(build-id) = 1719817bc8e272a936892dff111fc066793f502d debuginfo(build-id) = 1c3d2764bd08327da0f0e672fcebf347849ffa66 debuginfo(build-id) = 1c6bc4265b4fe861752a3d9976d02e0f8d8fa529 debuginfo(build-id) = 20b52238da4443849b844cf6f95b86c3babc79a6 debuginfo(build-id) = 227cc7b2f87245adbb32ab6f407e81d2f786e293 debuginfo(build-id) = 25e6b5e167133738a09f194d00fe8b28f0477060 debuginfo(build-id) = 2f76010c85c63ec4b9ef29ccf24848cd7fe3db0c debuginfo(build-id) = 2f8bad187bf677288a0ec4bfaf2af23088551f30 debuginfo(build-id) = 40eb9315cc045a7ff1722829752a5bd3de5e7db6 debuginfo(build-id) = 41175fe03f0887980fc36c8bf581e7f4cbb5a388 debuginfo(build-id) = 4d6fd5b6dbb3c928eb18307b87c6c150b0a2c5f2 debuginfo(build-id) = 512793c7a3f4c9a9c4b94473bcf7756e1e5a391e debuginfo(build-id) = 5283379302da7d50203bb96b8bd74e79a4e78052 debuginfo(build-id) = 5f1374d676c4f91412faac10a08802567b9478ab debuginfo(build-id) = 74a69889e6c0b5a914b3b972410cf35bbc1ee3d9 debuginfo(build-id) = 8531e0ca7de464c348a3429df9c4c58c7de08980 debuginfo(build-id) = 89c0bf8cc9a27a80eb82d42c6b1e6194e578be83 debuginfo(build-id) = 96a8c11c065c2244c11053604247b3659298c528 debuginfo(build-id) = a3d935ca9285d35136ed8093d52ad9511a6c1aac debuginfo(build-id) = c243208b0a338ed231f99cc40cf4ef2b3bafa77c debuginfo(build-id) = d2317304e10fd1142705fb9e4eb162e74d3fc3b3 debuginfo(build-id) = dc29dbc622a14be349a63c52c3292d809323cf34 debuginfo(build-id) = e6051c5cdecb295b6326f65cb8af4c7a05f3f3b7 debuginfo(build-id) = ecc9fdc5c7d9b6913a47be797e6cd1eed550c284 debuginfo(build-id) = f08e63978c9b6d51d0fb433fe4c0209e640f5e1f staden-io_lib-debuginfo = 1.12.4-14.fc29 staden-io_lib-debuginfo(riscv-64) = 1.12.4-14.fc29
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: staden-io_lib-debugsource(riscv-64) = 1.12.4-14.fc29
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64
Wrote: /builddir/build/RPMS/staden-io_lib-1.12.4-14.fc29.riscv64.rpm
Wrote: /builddir/build/RPMS/staden-io_lib-devel-1.12.4-14.fc29.riscv64.rpm
Wrote: /builddir/build/RPMS/staden-io_lib-debugsource-1.12.4-14.fc29.riscv64.rpm
Wrote: /builddir/build/RPMS/staden-io_lib-debuginfo-1.12.4-14.fc29.riscv64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.qjFoYc
+ umask 022
+ cd /builddir/build/BUILD
+ cd io_lib-1.12.4
+ rm -rf /builddir/build/BUILDROOT/staden-io_lib-1.12.4-14.fc29.riscv64
+ exit 0
Child return code was: 0