Mock Version: 2.15 Mock Version: 2.15 Mock Version: 2.15 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libghemical.spec'], chrootPath='/var/lib/mock/f40-build-765646-123546/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=604800uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/libghemical.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False warning: line 25: Possible unexpanded macro in: Requires: libint(api)(riscv-64) = %{_libint_apiversion} Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1702598400 Wrote: /builddir/build/SRPMS/libghemical-3.0.0-22.fc40.src.rpm RPM build warnings: line 25: Possible unexpanded macro in: Requires: libint(api)(riscv-64) = %{_libint_apiversion} Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libghemical.spec'], chrootPath='/var/lib/mock/f40-build-765646-123546/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=604800uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/libghemical.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1702598400 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.vXryTg + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf libghemical-3.0.0 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/libghemical-3.0.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd libghemical-3.0.0 + rm -rf /builddir/build/BUILD/libghemical-3.0.0-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/libghemical-3.0.0-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.1HQc5O + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libghemical-3.0.0 + sed -i s/blas/flexiblas/g configure.ac + sed -i s/lapack/flexiblas/g configure.ac + autoreconf -ivf autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force autoreconf: configure.ac: tracing autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: Consider adding 'AC_CONFIG_MACRO_DIRS([m4])' to configure.ac, libtoolize: and rerunning libtoolize and aclocal. libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. autoreconf: running: intltoolize --copy --force autoreconf: configure.ac: not using Gtkdoc autoreconf: running: aclocal --force autoreconf: running: /usr/bin/autoconf --force configure.ac:26: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:26: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10863: AM_CONFIG_HEADER is expanded from... configure.ac:26: the top level configure.ac:32: warning: 'AM_CONFIG_HEADER': this macro is obsolete. configure.ac:32: You should use the 'AC_CONFIG_HEADERS' macro instead. ./lib/autoconf/general.m4:2434: AC_DIAGNOSE is expanded from... aclocal.m4:10863: AM_CONFIG_HEADER is expanded from... configure.ac:32: the top level configure.ac:91: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:91: You should run autoupdate. aclocal.m4:799: AC_PROG_LIBTOOL is expanded from... configure.ac:91: the top level configure.ac:105: warning: The macro `GLIB_GNU_GETTEXT' is obsolete. configure.ac:105: You should run autoupdate. aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... aclocal.m4:73: GLIB_LC_MESSAGES is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from... ./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... lib/m4sugar/m4sh.m4:699: AS_IF is expanded from... ./lib/autoconf/headers.m4:89: _AC_CHECK_HEADER_COMPILE is expanded from... ./lib/autoconf/headers.m4:56: AC_CHECK_HEADER is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:105: warning: The macro `AC_OUTPUT_COMMANDS' is obsolete. configure.ac:105: You should run autoupdate. ./lib/autoconf/status.m4:1025: AC_OUTPUT_COMMANDS is expanded from... aclocal.m4:172: GLIB_WITH_NLS is expanded from... aclocal.m4:388: GLIB_GNU_GETTEXT is expanded from... aclocal.m4:488: AM_GLIB_GNU_GETTEXT is expanded from... configure.ac:105: the top level configure.ac:126: warning: The macro `AC_TRY_RUN' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2997: AC_TRY_RUN is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:126: warning: The macro `AC_TRY_LINK' is obsolete. configure.ac:126: You should run autoupdate. ./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from... acinclude.m4:10: AM_PATH_SC is expanded from... configure.ac:126: the top level configure.ac:159: warning: The macro `AC_PROG_CC_STDC' is obsolete. configure.ac:159: You should run autoupdate. ./lib/autoconf/c.m4:1666: AC_PROG_CC_STDC is expanded from... configure.ac:159: the top level configure.ac:171: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:171: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:171: the top level autoreconf: running: /usr/bin/autoheader --force autoreconf: running: automake --add-missing --copy --force-missing configure.ac:86: installing './compile' configure.ac:42: installing './missing' /usr/share/automake-1.16/am/ltlibrary.am: warning: 'libghemical.la': linking libtool libraries using a non-POSIX /usr/share/automake-1.16/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac' src/Makefile.am:1: while processing Libtool library 'libghemical.la' src/Makefile.am: installing './depcomp' autoreconf: Leaving directory '.' + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' x '!=' x ']' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./config.sub ++ basename ./config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub '/usr/lib/rpm/redhat/config.sub' -> './config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./config.guess ++ basename ./config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess '/usr/lib/rpm/redhat/config.guess' -> './config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=riscv64-redhat-linux-gnu --host=riscv64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --enable-mopac7 --enable-mpqc --disable-static --disable-sctest checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking build system type... riscv64-redhat-linux-gnu checking host system type... riscv64-redhat-linux-gnu checking for riscv64-redhat-linux-gnu-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert riscv64-redhat-linux-gnu file names to riscv64-redhat-linux-gnu format... func_convert_file_noop checking how to convert riscv64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for riscv64-redhat-linux-gnu-file... no checking for file... file checking for riscv64-redhat-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for riscv64-redhat-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for riscv64-redhat-linux-gnu-ar... no checking for ar... ar checking for archiver @FILE support... @ checking for riscv64-redhat-linux-gnu-strip... no checking for strip... strip checking for riscv64-redhat-linux-gnu-ranlib... no checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for riscv64-redhat-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ar... /usr/bin/ar checking for sh... /bin/sh checking whether make sets $(MAKE)... (cached) yes checking for riscv64-redhat-linux-gnu-pkg-config... /usr/bin/riscv64-redhat-linux-gnu-pkg-config checking pkg-config is at least version 0.9.0... yes checking whether NLS is requested... yes checking for intltool >= 0.40.0... 0.51.0 found checking for intltool-update... /usr/bin/intltool-update checking for intltool-merge... /usr/bin/intltool-merge checking for intltool-extract... /usr/bin/intltool-extract checking for xgettext... /usr/bin/xgettext checking for msgmerge... /usr/bin/msgmerge checking for msgfmt... /usr/bin/msgfmt checking for gmsgfmt... /usr/bin/msgfmt checking for perl... /usr/bin/perl checking for perl >= 5.8.1... 5.38.2 checking for XML::Parser... ok checking for locale.h... yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for libintl.h... yes checking for ngettext in libc... yes checking for dgettext in libc... yes checking for bind_textdomain_codeset... yes checking for msgfmt... (cached) /usr/bin/msgfmt checking for dcgettext... yes checking if msgfmt accepts -c... yes checking for gmsgfmt... (cached) /usr/bin/msgfmt checking for xgettext... (cached) /usr/bin/xgettext checking whether build environment is sane... yes checking for acos in -lm... yes checking for main in -lflexiblas... yes checking for main in -lflexiblas... (cached) yes checking for sc-config... /usr/bin/sc-config checking SC - version... yes checking for libmopac7 >= 1.13... yes checking for GL/gl.h... yes checking for inline... inline checking for an ANSI C-conforming const... yes checking for egrep... (cached) /usr/bin/grep -E configure: build options: ^^^^^^^^^^^^^^ enable MPQC : yes enable MOPAC7 : yes checking that generated files are newer than configure... done checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating libghemical.pc config.status: creating Makefile config.status: creating bin/Makefile config.status: creating bin/amber/Makefile config.status: creating bin/builder/Makefile config.status: creating bin/param_mm/Makefile config.status: creating bin/param_mm/default/Makefile config.status: creating bin/param_mm/prmfit/Makefile config.status: creating bin/param_mm/tripos52/Makefile config.status: creating bin/param_sf/Makefile config.status: creating bin/param_sf/default/Makefile config.status: creating po/Makefile.in config.status: creating src/Makefile config.status: creating src/libghemicalconfig.h config.status: creating src/libghemical-features.h config.status: executing src/libghemicalconfig2.h commands config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing stamp.h commands config.status: executing po/stamp-it commands + /usr/bin/make -O -j4 V=1 VERBOSE=1 Making all in src /usr/bin/make all-am make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o constraint.lo constraint.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c constraint.cpp -fPIC -DPIC -o .libs/constraint.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o atom.lo atom.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c atom.cpp -fPIC -DPIC -o .libs/atom.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' atom.cpp:33:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 33 | element element::current_element = element("C"); | ^~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o bond.lo bond.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c bond.cpp -fPIC -DPIC -o .libs/bond.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o utility.lo utility.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c utility.cpp -fPIC -DPIC -o .libs/utility.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' utility.cpp: In function 'void DefineSecondaryStructure(model*)': utility.cpp:308:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 308 | i32s tmp1[2] = { n1, n2 }; | ^~ utility.cpp:309:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 309 | i32s tmp2[2] = { n1, n2 + 4 }; | ^~ utility.cpp:349:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:349:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 349 | i32s t1a[2] = { n1, n2 - 1 }; i32s t1b[2] = { n1, n3 }; | ^~ utility.cpp:352:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:352:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 352 | i32s t2a[2] = { n1, n3 }; i32s t2b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:355:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:355:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 355 | i32s t3a[2] = { n1, n3 - 1 }; i32s t3b[2] = { n1, n2 }; | ^~ utility.cpp:358:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:358:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 358 | i32s t4a[2] = { n1, n2 }; i32s t4b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:361:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:361:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 361 | i32s t5a[2] = { n1, n2 }; i32s t5b[2] = { n1, n3 }; | ^~ utility.cpp:364:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:364:75: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 364 | i32s t6a[2] = { n1, n3 }; i32s t6b[2] = { n1, n2 }; | ^~ utility.cpp:367:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:367:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 367 | i32s t7a[2] = { n1, n2 - 1 }; i32s t7b[2] = { n1, n3 + 1 }; | ^~ utility.cpp:370:49: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ utility.cpp:370:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o typerule.lo typerule.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c typerule.cpp -fPIC -DPIC -o .libs/typerule.o typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)': typerule.cpp:172:56: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'long unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 172 | i32s tmp1[2] = { strlen(buffer), 0 }; | ~~~~~~^~~~~~~~ typerule.cpp:193:49: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 193 | else tmp2[1] = buffer[tmp1[0]++]; element el = element(tmp2); | ^~~~ typerule.cpp:193:83: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 193 | else tmp2[1] = buffer[tmp1[0]++]; element el = element(tmp2); | ^~~~~~~ typerule.cpp: In member function 'bool typerule::CheckRules(model*, atom*, i32s, i32s)': typerule.cpp:302:45: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 302 | if (atom->GetConnRecCount() != (i32u) sr_vector[rule].data) return false; | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o engine.lo engine.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c engine.cpp -fPIC -DPIC -o .libs/engine.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o chn_info.lo chn_info.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c chn_info.cpp -fPIC -DPIC -o .libs/chn_info.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_qm.lo eng1_qm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_qm.cpp -fPIC -DPIC -o .libs/eng1_qm.o In file included from local_i18n.h:38, from eng1_qm.cpp:27: libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined 99 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm.cpp:24: /usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined 105 | #define PACKAGE_TARNAME "libghemical" | /usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined 111 | #define PACKAGE_VERSION "3.0.0" | /usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | In file included from eng1_qm.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o mfinder.lo mfinder.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c mfinder.cpp -fPIC -DPIC -o .libs/mfinder.o mfinder.cpp: In member function 'void mfinder::Identify(model*)': mfinder.cpp:164:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 164 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~ mfinder.cpp:164:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 164 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ mfinder.cpp:173:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 173 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~ mfinder.cpp:173:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 173 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ mfinder.cpp:221:37: warning: unused variable 'head_el' [-Wunused-variable] 221 | int head_el = NOT_DEFINED; | ^~~~~~~ mfinder.cpp:222:37: warning: unused variable 'tail_el' [-Wunused-variable] 222 | int tail_el = NOT_DEFINED; | ^~~~~~~ mfinder.cpp: In function 'std::ostream& operator<<(std::ostream&, mf_data_atm&)': mfinder.cpp:703:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 703 | if (p2.tr != NULL) p1 << " " << (* p2.tr); p1 << " "; | ^~ mfinder.cpp:703:52: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 703 | if (p2.tr != NULL) p1 << " " << (* p2.tr); p1 << " "; | ^~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_qm_mopac.lo eng1_qm_mopac.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_qm_mopac.cpp -fPIC -DPIC -o .libs/eng1_qm_mopac.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' In file included from eng1_qm_mopac.h:30, from eng1_qm_mopac.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm_mopac.cpp: In destructor 'eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In destructor 'virtual eng1_qm_mopac::~eng1_qm_mopac()': eng1_qm_mopac.cpp:153:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 153 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:157:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 157 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp: In member function 'void eng1_qm_mopac::FixMeLaterTSS()': eng1_qm_mopac.cpp:178:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 178 | system(cs_FOR005.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ eng1_qm_mopac.cpp:181:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 181 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_qm_mpqc.lo eng1_qm_mpqc.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_qm_mpqc.cpp -fPIC -DPIC -o .libs/eng1_qm_mpqc.o In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined 99 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng1_qm_mpqc.cpp:22: /usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined 105 | #define PACKAGE_TARNAME "libghemical" | /usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined 111 | #define PACKAGE_VERSION "3.0.0" | /usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | In file included from /usr/include/mpqc/util/group/linkage.h:32, from /usr/include/mpqc/math/scmat/linkage.h:34, from /usr/include/mpqc/chemistry/qc/scf/linkage.h:37, from eng1_qm_mpqc.cpp:44: /usr/include/mpqc/scconfig.h:278: warning: "PACKAGE_NAME" redefined 278 | #define PACKAGE_NAME "" | libghemicalconfig.h:99: note: this is the location of the previous definition 99 | #define PACKAGE_NAME "libghemical" | /usr/include/mpqc/scconfig.h:281: warning: "PACKAGE_STRING" redefined 281 | #define PACKAGE_STRING "" | libghemicalconfig.h:102: note: this is the location of the previous definition 102 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/mpqc/scconfig.h:284: warning: "PACKAGE_TARNAME" redefined 284 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:105: note: this is the location of the previous definition 105 | #define PACKAGE_TARNAME "libghemical" | /usr/include/mpqc/scconfig.h:290: warning: "PACKAGE_VERSION" redefined 290 | #define PACKAGE_VERSION "" | libghemicalconfig.h:111: note: this is the location of the previous definition 111 | #define PACKAGE_VERSION "3.0.0" | In file included from eng1_qm_mpqc.h:32: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ In file included from /usr/include/mpqc/math/optimize/qnewton.h:39, from /usr/include/mpqc/math/optimize/linkage.h:31, from /usr/include/mpqc/chemistry/molecule/linkage.h:40, from /usr/include/mpqc/chemistry/qc/scf/linkage.h:38: /usr/include/mpqc/math/optimize/opt.h: At global scope: /usr/include/mpqc/math/optimize/opt.h:106:18: warning: 'virtual void sc::Optimize::init()' was hidden [-Woverloaded-virtual=] 106 | virtual void init(); | ^~~~ /usr/include/mpqc/math/optimize/opt.h:152:18: note: by 'sc::LineOpt::init' 152 | virtual void init(RefSCVector& direction, Ref function); | ^~~~ eng1_qm_mpqc.cpp: In constructor 'eng1_qm_mpqc::eng1_qm_mpqc(setup*, i32u, i32u)': eng1_qm_mpqc.cpp:50:92: warning: base 'eng1_qm' will be initialized after [-Wreorder] 50 | eng1_qm_mpqc::eng1_qm_mpqc(setup * p1, i32u p2, i32u mode) : eng1_qm(p1, p2), engine(p1, p2) | ^ eng1_qm_mpqc.cpp:50:92: warning: base 'engine' [-Wreorder] eng1_qm_mpqc.cpp:50:1: warning: when initialized here [-Wreorder] 50 | eng1_qm_mpqc::eng1_qm_mpqc(setup * p1, i32u p2, i32u mode) : eng1_qm(p1, p2), engine(p1, p2) | ^~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o seqbuild.lo seqbuild.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c seqbuild.cpp -fPIC -DPIC -o .libs/seqbuild.o seqbuild.cpp: In member function 'void sequencebuilder::Build(model*, sb_chain_descriptor*, bool)': seqbuild.cpp:307:29: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'const int' [-Wsign-compare] 307 | for (i32u n1 = 0;n1 < num_res;n1++) | ~~~^~~~~~~~~ seqbuild.cpp:310:37: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'int' [-Wsign-compare] 310 | bool last_res = (n1 == (num_res - 1)); | ~~~^~~~~~~~~~~~~~~~ seqbuild.cpp:317:74: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 317 | if (chde->c_crd_BGN < 0 && chde->c_crd_v[n2].pos == n1) chde->c_crd_BGN = n2; seqbuild.cpp:318:98: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 318 | if (chde->c_crd_BGN >= 0 && chde->c_crd_END < 0 && chde->c_crd_v[n2].pos > n1) chde->c_crd_END = n2; seqbuild.cpp:324:74: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 324 | if (chde->c_tor_BGN < 0 && chde->c_tor_v[n2].pos == n1) chde->c_tor_BGN = n2; seqbuild.cpp:325:98: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 325 | if (chde->c_tor_BGN >= 0 && chde->c_tor_END < 0 && chde->c_tor_v[n2].pos > n1) chde->c_tor_END = n2; seqbuild.cpp: In member function 'void sequencebuilder::Identify(model*)': seqbuild.cpp:541:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 541 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~ seqbuild.cpp:541:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 541 | if (!flag) continue; head_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ seqbuild.cpp:550:41: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 550 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~ seqbuild.cpp:550:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 550 | if (!flag) continue; tail_atoms.push_back(& (* it1)); break; | ^~~~~~~~~~ seqbuild.cpp: In member function 'void sequencebuilder::Convert(sb_chain_descriptor*, sb_data_atm*, fGL*)': seqbuild.cpp:1124:27: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1124 | if (tor_i >= td_v.size()) | ~~~~~~^~~~~~~~~~~~~~ seqbuild.cpp:1298:35: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1298 | if (tor_i >= chde->def_tor.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ seqbuild.cpp:1328:40: warning: comparison of integer expressions of different signedness: 'const int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1328 | else if (tor_i < chde->def_tor.size()) | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ seqbuild.cpp: In function 'std::istream& operator>>(std::istream&, sb_data_td&)': seqbuild.cpp:1577:14: warning: unused variable 'buffer' [-Wunused-variable] 1577 | char buffer[256]; | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_mm.lo eng1_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_mm.cpp -fPIC -DPIC -o .libs/eng1_mm.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o model.lo model.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c model.cpp -fPIC -DPIC -o .libs/model.o In file included from local_i18n.h:38, from model.cpp:46: libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined 99 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from model.cpp:35: /usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined 105 | #define PACKAGE_TARNAME "libghemical" | /usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined 111 | #define PACKAGE_VERSION "3.0.0" | /usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | In file included from model.cpp:31: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ model.cpp: In member function 'bool model::FindRing(atom*, atom*, signed char*, i32s, i32s, i32s)': model.cpp:961:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 961 | if (dist == size) return false; iter_cl it1; | ^~ model.cpp:961:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 961 | if (dist == size) return false; iter_cl it1; | ^~~~~~~ model.cpp: In member function 'void model::AddHydrogens()': model.cpp:1755:45: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses] 1755 | if (some_atoms_selected && (!(* it1).flags & ATOMFLAG_USER_SELECTED)) | ^~~~~~~~~~~~~~ model.cpp: In member function 'void model::SolvateBox(fGL, fGL, fGL, fGL, model*, const char*)': model.cpp:2248:52: warning: variable 'r1' set but not used [-Wunused-but-set-variable] 2248 | const default_at * at; f64 r1 = 0.150; f64 e1 = 0.175; | ^~ model.cpp:2248:68: warning: variable 'e1' set but not used [-Wunused-but-set-variable] 2248 | const default_at * at; f64 r1 = 0.150; f64 e1 = 0.175; | ^~ model.cpp: In member function 'void model::DoGeomOpt(geomopt_param&, bool)': model.cpp:2663:21: warning: unused variable 'eng_bp' [-Wunused-variable] 2663 | engine_bp * eng_bp = dynamic_cast(eng); | ^~~~~~ model.cpp: In member function 'bool model::GetCRDSetVisible(i32u)': model.cpp:319:30: warning: control reaches end of non-void function [-Wreturn-type] 319 | else assertion_failed(__FILE__, __LINE__, "index overflow"); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o tab_mm_tripos52.lo tab_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c tab_mm_tripos52.cpp -fPIC -DPIC -o .libs/tab_mm_tripos52.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_mm_tripos52.lo eng1_mm_tripos52.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_mm_tripos52.cpp -fPIC -DPIC -o .libs/eng1_mm_tripos52.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_mm_default.lo eng1_mm_default.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_mm_default.cpp -fPIC -DPIC -o .libs/eng1_mm_default.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o tab_mm_prmfit.lo tab_mm_prmfit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c tab_mm_prmfit.cpp -fPIC -DPIC -o .libs/tab_mm_prmfit.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' tab_mm_prmfit.cpp:597:17: warning: multi-line comment [-Wcomment] 597 | // / \ | ^ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_sf_ua.lo eng1_sf_ua.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_sf_ua.cpp -fPIC -DPIC -o .libs/eng1_sf_ua.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_sf_cg.lo eng1_sf_cg.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_sf_cg.cpp -fPIC -DPIC -o .libs/eng1_sf_cg.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_mm_prmfit.lo eng1_mm_prmfit.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_mm_prmfit.cpp -fPIC -DPIC -o .libs/eng1_mm_prmfit.o eng1_mm_prmfit.cpp: In constructor 'eng1_mm_prmfit::eng1_mm_prmfit(setup*, i32u, prmfit_tables&)': eng1_mm_prmfit.cpp:329:9: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 329 | if (query.index == NOT_DEFINED) bt3_err++; | ^~ eng1_mm_prmfit.cpp:331:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 331 | newbt3.fc1 = query.fc1; | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o tab_mm_default.lo tab_mm_default.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c tab_mm_default.cpp -fPIC -DPIC -o .libs/tab_mm_default.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' tab_mm_default.cpp:691:17: warning: multi-line comment [-Wcomment] 691 | // / \ | ^ tab_mm_default.cpp: In member function 'bool default_tables::e_Init(eng1_mm*, mm_default_bt3*, i32s*)': tab_mm_default.cpp:3178:17: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 3178 | if (z < 1) z = 1; z -= 1; | ^~ tab_mm_default.cpp:3178:35: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 3178 | if (z < 1) z = 1; z -= 1; | ^ make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o notice.lo notice.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c notice.cpp -fPIC -DPIC -o .libs/notice.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng2_qm_mm.lo eng2_qm_mm.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng2_qm_mm.cpp -fPIC -DPIC -o .libs/eng2_qm_mm.o In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:99: warning: "PACKAGE_NAME" redefined 99 | #define PACKAGE_NAME "libghemical" | In file included from /usr/include/mpqc/util/misc/exenv.h:37, from /usr/include/mpqc/util/class/class.h:46, from /usr/include/mpqc/util/keyval/keyval.h:42, from eng1_qm_mpqc.h:37, from eng2_qm_mm.h:38, from eng2_qm_mm.cpp:22: /usr/include/mpqc/scconfig.h:278: note: this is the location of the previous definition 278 | #define PACKAGE_NAME "" | libghemicalconfig.h:102: warning: "PACKAGE_STRING" redefined 102 | #define PACKAGE_STRING "libghemical 3.0.0" | /usr/include/mpqc/scconfig.h:281: note: this is the location of the previous definition 281 | #define PACKAGE_STRING "" | libghemicalconfig.h:105: warning: "PACKAGE_TARNAME" redefined 105 | #define PACKAGE_TARNAME "libghemical" | /usr/include/mpqc/scconfig.h:284: note: this is the location of the previous definition 284 | #define PACKAGE_TARNAME "" | libghemicalconfig.h:111: warning: "PACKAGE_VERSION" redefined 111 | #define PACKAGE_VERSION "3.0.0" | /usr/include/mpqc/scconfig.h:290: note: this is the location of the previous definition 290 | #define PACKAGE_VERSION "" | In file included from eng2_qm_mm.h:28: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:91:142: warning: no return statement in function returning non-void [-Wreturn-type] 91 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:127:155: warning: no return statement in function returning non-void [-Wreturn-type] 127 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mpqc::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o conjgrad.lo conjgrad.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c conjgrad.cpp -fPIC -DPIC -o .libs/conjgrad.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o intcrd.lo intcrd.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c intcrd.cpp -fPIC -DPIC -o .libs/intcrd.o intcrd.cpp: In constructor 'intcrd::intcrd(model&, i32s, i32s)': intcrd.cpp:82:47: warning: comparison of integer expressions of different signedness: 'int' and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 82 | if ((* it1).GetConnRecCount() < nbonds) | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o geomopt.lo geomopt.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c geomopt.cpp -fPIC -DPIC -o .libs/geomopt.o In file included from geomopt.h:31, from geomopt.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o moldyn.lo moldyn.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c moldyn.cpp -fPIC -DPIC -o .libs/moldyn.o moldyn.cpp: In member function 'virtual void moldyn::TakeMDStep(bool, bool)': moldyn.cpp:149:13: warning: variable 'current_temperature' set but not used [-Wunused-but-set-variable] 149 | f64 current_temperature = ConvEKinTemp(ekin); | ^~~~~~~~~~~~~~~~~~~ moldyn.cpp:242:55: warning: 'volume' may be used uninitialized [-Wmaybe-uninitialized] 242 | saved_density = 0.001 * sum_of_masses / volume; // kg/dm^3 | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ moldyn.cpp:188:21: note: 'volume' was declared here 188 | f64 volume; | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o search.lo search.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c search.cpp -fPIC -DPIC -o .libs/search.o In file included from search.h:35, from search.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ search.cpp: In constructor 'transition_state_search::transition_state_search(model*, f64, f64)': search.cpp:513:29: warning: comparison of integer expressions of different signedness: 'i32s' {aka 'int'} and 'i32u' {aka 'unsigned int'} [-Wsign-compare] 513 | for (i32s n1 = 0;n1 < mdl->GetCRDSetCount();n1++) | ~~~^~~~~~~~~~~~~~~~~~~~~~~ search.cpp:795:39: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'int' [-Wsign-compare] 795 | if (engQM->l2g_qm[ii] != ii) problems = true; | ~~~~~~~~~~~~~~~~~~^~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o pop_ana.lo pop_ana.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c pop_ana.cpp -fPIC -DPIC -o .libs/pop_ana.o In file included from pop_ana.h:31, from pop_ana.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ eng1_qm.h: In member function 'virtual bool eng1_qm::RemoveTorsionConstraint(atom*, atom*, atom*, atom*)': eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o resonance.lo resonance.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c resonance.cpp -fPIC -DPIC -o .libs/resonance.o make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o sasaeval.lo sasaeval.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c sasaeval.cpp -fPIC -DPIC -o .libs/sasaeval.o sasaeval.cpp: In constructor 'sasaeval::sasaeval(engine*)': sasaeval.cpp:59:27: warning: comparison of integer expressions of different signedness: 'i32u' {aka 'unsigned int'} and 'i32s' {aka 'int'} [-Wsign-compare] 59 | for (i32u i = 0;i < natm_GLOB;i++) | ~~^~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\""/usr/share/locale"\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c -o eng1_sf.lo eng1_sf.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/mpqc -DLOCALE_DIR=\"/usr/share/locale\" -I/usr/include/mpqc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -c eng1_sf.cpp -fPIC -DPIC -o .libs/eng1_sf.o eng1_sf.cpp: In member function 'void setup1_sf::StorePStatesToModel(eng1_sf*)': eng1_sf.cpp:965:33: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 965 | if (tmpc < -0.5) charge -= 1; if (tmpc > +0.5) charge += 1; | ^~ eng1_sf.cpp:965:63: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 965 | if (tmpc < -0.5) charge -= 1; if (tmpc > +0.5) charge += 1; | ^~ eng1_sf.cpp: In constructor 'eng1_sf::eng1_sf(setup*, i32u, bool, bool)': eng1_sf.cpp:1444:6: warning: variable 'h4flag_0' set but not used [-Wunused-but-set-variable] 1444 | bool h4flag_0 = false; if ((indr1 - 0) >= 0 && mysu->chn_vector[indc1].res_vector[indr1 - 0].state == SF_STATE_HELIX4) h4flag_0 = true; | ^~~~~~~~ eng1_sf.cpp:1447:6: warning: variable 'h4flag_3' set but not used [-Wunused-but-set-variable] 1447 | bool h4flag_3 = false; if ((indr1 - 3) >= 0 && mysu->chn_vector[indc1].res_vector[indr1 - 3].state == SF_STATE_HELIX4) h4flag_3 = true; | ^~~~~~~~ eng1_sf.cpp: In member function 'void eng1_sf::ComputeBT3(i32u)': eng1_sf.cpp:3463:49: warning: 'cs[0]' may be used uninitialized [-Wmaybe-uninitialized] 3463 | loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2]; | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3350:21: note: 'cs[0]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3463:58: warning: 'cs[1]' may be used uninitialized [-Wmaybe-uninitialized] 3463 | loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2]; | ~~~~~~~^~~~~~~ eng1_sf.cpp:3350:21: note: 'cs[1]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3463:66: warning: 'cs[2]' may be used uninitialized [-Wmaybe-uninitialized] 3463 | loop1 += fsc[0] * cs[0] + fsc[1] * cs[1] + fsc[2] * cs[2]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3350:21: note: 'cs[2]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3464:49: warning: 'sn[0]' may be used uninitialized [-Wmaybe-uninitialized] 3464 | loop1 += fss[0] * sn[0] + fss[1] * sn[1] + fss[2] * sn[2]; | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3350:32: note: 'sn[0]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3464:58: warning: 'sn[1]' may be used uninitialized [-Wmaybe-uninitialized] 3464 | loop1 += fss[0] * sn[0] + fss[1] * sn[1] + fss[2] * sn[2]; | ~~~~~~~^~~~~~~ eng1_sf.cpp:3350:32: note: 'sn[1]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ eng1_sf.cpp:3464:66: warning: 'sn[2]' may be used uninitialized [-Wmaybe-uninitialized] 3464 | loop1 += fss[0] * sn[0] + fss[1] * sn[1] + fss[2] * sn[2]; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ eng1_sf.cpp:3350:32: note: 'sn[2]' was declared here 3350 | f64 cs[3]; f64 sn[3]; | ^~ make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /bin/sh ../libtool --tag=CXX --mode=link g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -version-info 5:1:0 -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -o libghemical.la -rpath /usr/lib64 atom.lo bond.lo constraint.lo model.lo engine.lo typerule.lo utility.lo chn_info.lo seqbuild.lo mfinder.lo eng1_qm.lo eng1_qm_mpqc.lo eng1_qm_mopac.lo eng1_mm.lo eng1_mm_tripos52.lo tab_mm_tripos52.lo eng1_mm_default.lo tab_mm_default.lo eng1_mm_prmfit.lo tab_mm_prmfit.lo eng1_sf.lo eng1_sf_ua.lo eng1_sf_cg.lo eng2_qm_mm.lo notice.lo conjgrad.lo intcrd.lo search.lo geomopt.lo moldyn.lo pop_ana.lo sasaeval.lo resonance.lo -lflexiblas -lflexiblas -lm -L/usr/lib64 -lSCoptions -lSCpsi -lSCmbptr12 -lSCmbpt -lSCwfn -lSCsolvent -lSCdft -lSCscf -lSCcints -lSCintv3 -lSCoint3 -lSCbasis -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lderiv -lr12 -lint -lm -ldl -lflexiblas -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -lflexiblas -lgfortran -lm -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -lflexiblas -lgfortran -lm -L/usr/lib -lmopac7 libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/riscv64-redhat-linux/13/crti.o /usr/lib/gcc/riscv64-redhat-linux/13/crtbeginS.o .libs/atom.o .libs/bond.o .libs/constraint.o .libs/model.o .libs/engine.o .libs/typerule.o .libs/utility.o .libs/chn_info.o .libs/seqbuild.o .libs/mfinder.o .libs/eng1_qm.o .libs/eng1_qm_mpqc.o .libs/eng1_qm_mopac.o .libs/eng1_mm.o .libs/eng1_mm_tripos52.o .libs/tab_mm_tripos52.o .libs/eng1_mm_default.o .libs/tab_mm_default.o .libs/eng1_mm_prmfit.o .libs/tab_mm_prmfit.o .libs/eng1_sf.o .libs/eng1_sf_ua.o .libs/eng1_sf_cg.o .libs/eng2_qm_mm.o .libs/notice.o .libs/conjgrad.o .libs/intcrd.o .libs/search.o .libs/geomopt.o .libs/moldyn.o .libs/pop_ana.o .libs/sasaeval.o .libs/resonance.o -lm -L/usr/lib64 -lSCoptions -lSCpsi -lSCmbptr12 -lSCmbpt -lSCwfn -lSCsolvent -lSCdft -lSCscf -lSCcints -lSCintv3 -lSCoint3 -lSCbasis -lSCmolecule -lSCisosurf -lSCoptimize -lSCsymmetry -lSCscmat -lSCgroup -lSCrender -lSCmisc -lSCstate -lSCkeyval -lSCclass -lSCcontainer -lSCref -lderiv -lr12 -lint -lm -ldl -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -lm -lflexiblas -lgfortran -lm -L/usr/lib -lmopac7 -L/usr/lib/gcc/riscv64-redhat-linux/13 -lstdc++ -lm -lgcc_s -lc -lgcc_s /usr/lib/gcc/riscv64-redhat-linux/13/crtendS.o /usr/lib/gcc/riscv64-redhat-linux/13/crtn.o -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O2 -g -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -Wl,-soname -Wl,libghemical.so.5 -o .libs/libghemical.so.5.0.1 libtool: link: (cd ".libs" && rm -f "libghemical.so.5" && ln -s "libghemical.so.5.0.1" "libghemical.so.5") libtool: link: (cd ".libs" && rm -f "libghemical.so" && ln -s "libghemical.so.5.0.1" "libghemical.so") libtool: link: ( cd ".libs" && rm -f "libghemical.la" && ln -s "../libghemical.la" "libghemical.la" ) make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' Making all in bin Making all in amber make[2]: Nothing to be done for 'all'. Making all in builder make[2]: Nothing to be done for 'all'. Making all in param_mm Making all in default make[3]: Nothing to be done for 'all'. Making all in prmfit make[3]: Nothing to be done for 'all'. Making all in tripos52 make[3]: Nothing to be done for 'all'. make[3]: Nothing to be done for 'all-am'. Making all in param_sf Making all in default make[3]: Nothing to be done for 'all'. make[3]: Nothing to be done for 'all-am'. make[2]: Nothing to be done for 'all-am'. Making all in po make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po' make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po' grep: warning: stray \ before # grep: warning: stray \ before # grep: warning: stray \ before # make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po' file=`echo de | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file de.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po' file=`echo fi | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file fi.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po' file=`echo pt_BR | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file pt_BR.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po' file=`echo mk | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file mk.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po' file=`echo ru | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file ru.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po' file=`echo sq | sed 's,.*/,,'`.gmo \ && rm -f $file && /usr/bin/msgfmt -o $file sq.po make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po' make[1]: Nothing to be done for 'all-am'. + sed -ir -e 's/^Libs:.*/Libs: -L${libdir} -lghemical/g' libghemical.pc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.KEiDAy + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64 ++ dirname /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64 + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd libghemical-3.0.0 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64 'INSTALL=/usr/bin/install -p' Making install in src make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/src' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/lib64' /bin/sh ../libtool --mode=install /usr/bin/install -p libghemical.la '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/lib64' libtool: install: /usr/bin/install -p .libs/libghemical.so.5.0.1 /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/lib64/libghemical.so.5.0.1 libtool: install: (cd /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/lib64 && { ln -s -f libghemical.so.5.0.1 libghemical.so.5 || { rm -f libghemical.so.5 && ln -s libghemical.so.5.0.1 libghemical.so.5; }; }) libtool: install: (cd /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/lib64 && { ln -s -f libghemical.so.5.0.1 libghemical.so || { rm -f libghemical.so && ln -s libghemical.so.5.0.1 libghemical.so; }; }) libtool: install: /usr/bin/install -p .libs/libghemical.lai /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/lib64/libghemical.la libtool: warning: remember to run 'libtool --finish /usr/lib64' /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/include/ghemical' /usr/bin/install -p -m 644 libghemicaldefine.h libghemical-features.h local_i18n.h typedef.h v3d.h atom.h bond.h constraint.h model.h engine.h typerule.h utility.h chn_info.h seqbuild.h mfinder.h eng1_qm.h eng1_qm_mpqc.h eng1_qm_mopac.h eng1_mm.h eng1_mm_tripos52.h tab_mm_tripos52.h eng1_mm_default.h tab_mm_default.h eng1_mm_prmfit.h tab_mm_prmfit.h eng1_sf.h eng1_sf_ua.h eng1_sf_cg.h eng2_qm_mm.h notice.h conjgrad.h intcrd.h search.h geomopt.h moldyn.h pop_ana.h sasaeval.h resonance.h '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/include/ghemical' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/src' Making install in bin make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin' Making install in amber make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/amber' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/amber' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/amber' /usr/bin/install -p -m 644 all_amino94_MOD.in all_aminoct94.in all_aminont94.in all_nuc94_MOD.in parm99_frcmod_ff99SB.dat '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/amber' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/amber' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/amber' Making install in builder make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/builder' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/builder' make[3]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/builder' /usr/bin/install -p -m 644 amino.txt nucleic.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/builder' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/builder' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/builder' Making install in param_mm make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm' Making install in default make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/default' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/default' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/param_mm/default' /usr/bin/install -p -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/param_mm/default' make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/default' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/default' Making install in prmfit make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/prmfit' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/param_mm/prmfit' /usr/bin/install -p -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/param_mm/prmfit' make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/prmfit' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/prmfit' Making install in tripos52 make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/tripos52' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/param_mm/tripos52' /usr/bin/install -p -m 644 atomtypes.txt parameters1.txt parameters2.txt parameters3.txt parameters4.txt parameters5.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/param_mm/tripos52' make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/tripos52' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm/tripos52' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_mm' Making install in param_sf make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf' Making install in default make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf/default' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf/default' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/param_sf/default' /usr/bin/install -p -m 644 loopdip.txt looptor.txt nonbonded.txt '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/libghemical/3.0.0/param_sf/default' make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf/default' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf/default' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf' make[4]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf' make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin/param_sf' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin' make[3]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/bin' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin' make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/bin' Making install in po make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0/po' grep: warning: stray \ before # grep: warning: stray \ before # grep: warning: stray \ before # grep: warning: stray \ before # grep: warning: stray \ before # linguas="de fi mk pt_BR ru sq "; \ for lang in $linguas; do \ dir=/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/locale/$lang/LC_MESSAGES; \ /bin/sh /builddir/build/BUILD/libghemical-3.0.0/install-sh -d $dir; \ if test -r $lang.gmo; then \ /usr/bin/install -p -m 644 $lang.gmo $dir/libghemical.mo; \ echo "installing $lang.gmo as $dir/libghemical.mo"; \ else \ /usr/bin/install -p -m 644 ./$lang.gmo $dir/libghemical.mo; \ echo "installing ./$lang.gmo as" \ "$dir/libghemical.mo"; \ fi; \ if test -r $lang.gmo.m; then \ /usr/bin/install -p -m 644 $lang.gmo.m $dir/libghemical.mo.m; \ echo "installing $lang.gmo.m as $dir/libghemical.mo.m"; \ else \ if test -r ./$lang.gmo.m ; then \ /usr/bin/install -p -m 644 ./$lang.gmo.m \ $dir/libghemical.mo.m; \ echo "installing ./$lang.gmo.m as" \ "$dir/libghemical.mo.m"; \ else \ true; \ fi; \ fi; \ done installing de.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/locale/de/LC_MESSAGES/libghemical.mo installing fi.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/locale/fi/LC_MESSAGES/libghemical.mo installing mk.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/locale/mk/LC_MESSAGES/libghemical.mo installing pt_BR.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/locale/pt_BR/LC_MESSAGES/libghemical.mo installing ru.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/locale/ru/LC_MESSAGES/libghemical.mo installing sq.gmo as /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/locale/sq/LC_MESSAGES/libghemical.mo make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0/po' make[1]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0' make[2]: Entering directory '/builddir/build/BUILD/libghemical-3.0.0' make[2]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/lib64/pkgconfig' /usr/bin/install -p -m 644 libghemical.pc '/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/lib64/pkgconfig' make[2]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0' make[1]: Leaving directory '/builddir/build/BUILD/libghemical-3.0.0' + find /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/lib64 -name '*.la' -exec rm -rf '{}' ';' + /usr/lib/rpm/find-lang.sh /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64 libghemical + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 3.0.0-22.fc40 --unique-debug-suffix -3.0.0-22.fc40.riscv64 --unique-debug-src-base libghemical-3.0.0-22.fc40.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/libghemical-3.0.0 find-debuginfo: starting Extracting debug info from 1 files DWARF-compressing 1 files sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/libghemical-3.0.0-22.fc40.riscv64 2113 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: libghemical-3.0.0-22.fc40.riscv64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.gpqIQV + umask 022 + cd /builddir/build/BUILD + cd libghemical-3.0.0 + DOCDIR=/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/doc/libghemical + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/doc/libghemical + cp -pr /builddir/build/BUILD/libghemical-3.0.0/AUTHORS /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/doc/libghemical + cp -pr /builddir/build/BUILD/libghemical-3.0.0/ChangeLog /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/doc/libghemical + cp -pr /builddir/build/BUILD/libghemical-3.0.0/TODO /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/doc/libghemical + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Q6efYa + umask 022 + cd /builddir/build/BUILD + cd libghemical-3.0.0 + LICENSEDIR=/builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/licenses/libghemical + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/licenses/libghemical + cp -pr /builddir/build/BUILD/libghemical-3.0.0/COPYING /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64/usr/share/licenses/libghemical + RPM_EC=0 ++ jobs -p + exit 0 Provides: libghemical = 3.0.0-22.fc40 libghemical(riscv-64) = 3.0.0-22.fc40 libghemical.so.5()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libSCbasis.so.7()(64bit) libSCcints.so.7()(64bit) libSCclass.so.7()(64bit) libSCcontainer.so.7()(64bit) libSCdft.so.7()(64bit) libSCgroup.so.7()(64bit) libSCintv3.so.7()(64bit) libSCisosurf.so.7()(64bit) libSCkeyval.so.7()(64bit) libSCmbpt.so.7()(64bit) libSCmbptr12.so.7()(64bit) libSCmisc.so.7()(64bit) libSCmolecule.so.7()(64bit) libSCoint3.so.7()(64bit) libSCoptimize.so.7()(64bit) libSCoptions.so.7()(64bit) libSCpsi.so.7()(64bit) libSCref.so.7()(64bit) libSCrender.so.7()(64bit) libSCscf.so.7()(64bit) libSCscmat.so.7()(64bit) libSCsolvent.so.7()(64bit) libSCstate.so.7()(64bit) libSCsymmetry.so.7()(64bit) libSCwfn.so.7()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libderiv-stable.so.1()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgfortran.so.5()(64bit) libint-stable.so.1()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libmopac7.so.1()(64bit) libr12-stable.so.1()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Processing files: libghemical-devel-3.0.0-22.fc40.riscv64 Provides: libghemical-devel = 3.0.0-22.fc40 libghemical-devel(riscv-64) = 3.0.0-22.fc40 pkgconfig(libghemical) = 3.0.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config libghemical.so.5()(64bit) pkgconfig(libmopac7) Processing files: libghemical-debugsource-3.0.0-22.fc40.riscv64 Provides: libghemical-debugsource = 3.0.0-22.fc40 libghemical-debugsource(riscv-64) = 3.0.0-22.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: libghemical-debuginfo-3.0.0-22.fc40.riscv64 Provides: debuginfo(build-id) = 8d8a3bf4aaedf5d9397cee0a593709c3749a8186 libghemical-debuginfo = 3.0.0-22.fc40 libghemical-debuginfo(riscv-64) = 3.0.0-22.fc40 libghemical.so.5.0.1-3.0.0-22.fc40.riscv64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: libghemical-debugsource(riscv-64) = 3.0.0-22.fc40 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64 Wrote: /builddir/build/RPMS/libghemical-devel-3.0.0-22.fc40.riscv64.rpm Wrote: /builddir/build/RPMS/libghemical-debugsource-3.0.0-22.fc40.riscv64.rpm Wrote: /builddir/build/RPMS/libghemical-3.0.0-22.fc40.riscv64.rpm Wrote: /builddir/build/RPMS/libghemical-debuginfo-3.0.0-22.fc40.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.9XFNFP + umask 022 + cd /builddir/build/BUILD + cd libghemical-3.0.0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/libghemical-3.0.0-22.fc40.riscv64 + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.KKobne + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/libghemical-3.0.0-SPECPARTS + rm -rf libghemical-3.0.0 libghemical-3.0.0.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0