APBS  1.5
sVfetk_LocalVar Struct Reference

Vfetk LocalVar subclass. More...

#include </builddir/build/BUILD/apbs-pdb2pqr-apbs-1.5/apbs/src/fem/vfetk.h>

Data Fields

double nvec [VAPBS_DIM]
 
double vx [4][VAPBS_DIM]
 
double xq [VAPBS_DIM]
 
double U [MAXV]
 
double dU [MAXV][VAPBS_DIM]
 
double W
 
double dW [VAPBS_DIM]
 
double d2W
 
int sType
 
int fType
 
double A
 
double F
 
double B
 
double DB
 
double jumpDiel
 
Vfetkfetk
 
Vgreengreen
 
int initGreen
 
SS * simp
 
VV * verts [4]
 
int nverts
 
double ionConc [MAXION]
 
double ionQ [MAXION]
 
double ionRadii [MAXION]
 
double zkappa2
 
double zks2
 
double ionstr
 
int nion
 
double Fu_v
 
double DFu_wv
 
double delta
 
double u_D
 
double u_T
 

Detailed Description

Vfetk LocalVar subclass.

Author
Nathan Baker Contains variables used when solving the PDE with FEtk

Definition at line 215 of file vfetk.h.

Field Documentation

§ A

double A

Second-order differential term

Definition at line 228 of file vfetk.h.

§ B

double B

Entire ionic strength term

Definition at line 230 of file vfetk.h.

§ d2W

double d2W

Coulomb regularization term Laplacia

Definition at line 223 of file vfetk.h.

§ DB

double DB

Entire ionic strength term derivative

Definition at line 231 of file vfetk.h.

§ delta

double delta

Store delta value

Definition at line 250 of file vfetk.h.

§ DFu_wv

double DFu_wv

Store DFu_wv value

Definition at line 249 of file vfetk.h.

§ dU

double dU[MAXV][VAPBS_DIM]

Solution gradient

Definition at line 220 of file vfetk.h.

§ dW

double dW[VAPBS_DIM]

Coulomb regularization term gradient

Definition at line 222 of file vfetk.h.

§ F

double F

RHS characteristic function value

Definition at line 229 of file vfetk.h.

§ fetk

Vfetk* fetk

Pointer to the VFETK object

Definition at line 233 of file vfetk.h.

§ fType

int fType

Face type

Definition at line 225 of file vfetk.h.

§ Fu_v

double Fu_v

Store Fu_v value

Definition at line 248 of file vfetk.h.

§ green

Vgreen* green

Pointer to a Green's function object

Definition at line 234 of file vfetk.h.

§ initGreen

int initGreen

Boolean to designate whether Green's function has been initialized

Definition at line 235 of file vfetk.h.

§ ionConc

double ionConc[MAXION]

Counterion species' concentrations

Definition at line 241 of file vfetk.h.

§ ionQ

double ionQ[MAXION]

Counterion species' valencies

Definition at line 242 of file vfetk.h.

§ ionRadii

double ionRadii[MAXION]

Counterion species' radii

Definition at line 243 of file vfetk.h.

§ ionstr

double ionstr

Ionic strength parameters (M)

Definition at line 246 of file vfetk.h.

§ jumpDiel

double jumpDiel

Dielectric value on one side of a simplex face

Definition at line 232 of file vfetk.h.

§ nion

int nion

Number of ion species

Definition at line 247 of file vfetk.h.

§ nvec

double nvec[VAPBS_DIM]

Normal vector for a simplex face

Definition at line 216 of file vfetk.h.

§ nverts

int nverts

number of vertices in the simplex

Definition at line 240 of file vfetk.h.

§ simp

SS* simp

Pointer to the latest simplex object; set in initElement() and delta()

Definition at line 237 of file vfetk.h.

§ sType

int sType

Simplex type

Definition at line 224 of file vfetk.h.

§ U

double U[MAXV]

Solution value

Definition at line 219 of file vfetk.h.

§ u_D

double u_D

Store Dirichlet value

Definition at line 251 of file vfetk.h.

§ u_T

double u_T

Store true value

Definition at line 252 of file vfetk.h.

§ verts

VV* verts[4]

Pointer to the latest vertices; set in initElement

Definition at line 239 of file vfetk.h.

§ vx

double vx[4][VAPBS_DIM]

Vertex coordinates

Definition at line 217 of file vfetk.h.

§ W

double W

Coulomb regularization term scalar value

Definition at line 221 of file vfetk.h.

§ xq

double xq[VAPBS_DIM]

Quadrature pt

Definition at line 218 of file vfetk.h.

§ zkappa2

double zkappa2

Ionic strength parameters

Definition at line 244 of file vfetk.h.

§ zks2

double zks2

Ionic strength parameters

Definition at line 245 of file vfetk.h.


The documentation for this struct was generated from the following file: