Mock Version: 5.0 Mock Version: 5.0 Mock Version: 5.0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target riscv64 --nodeps /builddir/build/SPECS/R.spec'], chrootPath='/var/lib/mock/f42-build-861899-170473/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=604800uid=982gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._bp_53h0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._bp_53h0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '27620349ab374c5ca6531b58d1ec0fe3', '-D', '/var/lib/mock/f42-build-861899-170473/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._bp_53h0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target riscv64 --nodeps /builddir/build/SPECS/R.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1733788800 Wrote: /builddir/build/SRPMS/R-4.4.2-2.0.riscv64.fc42.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target riscv64 --nodeps /builddir/build/SPECS/R.spec'], chrootPath='/var/lib/mock/f42-build-861899-170473/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=604800uid=982gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._bp_53h0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=False) Using nspawn with args ['--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._bp_53h0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '74346c1507f44c3b8f138923cee088f5', '-D', '/var/lib/mock/f42-build-861899-170473/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv._bp_53h0:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/mapper/control', '--bind=/dev/fuse', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target riscv64 --nodeps /builddir/build/SPECS/R.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0', 'SYSTEMD_SECCOMP': '0'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1733788800 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.zC9wlk + umask 022 + cd /builddir/build/BUILD/R-4.4.2-build + test -d /builddir/build/BUILD/R-4.4.2-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/R-4.4.2-build + /usr/bin/rm -rf /builddir/build/BUILD/R-4.4.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-4.4.2-build + /usr/bin/mkdir -p /builddir/build/BUILD/R-4.4.2-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.UqKHZo + umask 022 + cd /builddir/build/BUILD/R-4.4.2-build + cd /builddir/build/BUILD/R-4.4.2-build + rm -rf R-4.4.2 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/R-4.4.2.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd R-4.4.2 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (R-3.3.0-fix-java_path-in-javareconf.patch):' Patch #0 (R-3.3.0-fix-java_path-in-javareconf.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fixpath --fuzz=0 patching file src/scripts/javareconf.in Hunk #1 succeeded at 79 (offset 1 line). + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.yaiWlB + umask 022 + cd /builddir/build/BUILD/R-4.4.2-build + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.4.2 + sed -i -e '/R_LIBS_SITE=/s/^/#/g' etc/Renviron.in + echo 'R_LIBS_SITE=${R_LIBS_SITE-'\''/usr/local/lib/R/site-library:/usr/local/lib/R/library:/usr/lib64/R/library:/usr/share/R/library'\''}' + export R_PDFVIEWER=/usr/bin/xdg-open + R_PDFVIEWER=/usr/bin/xdg-open + export R_BROWSER=/usr/bin/xdg-open + R_BROWSER=/usr/bin/xdg-open + export JAVA_HOME=/usr/lib/jvm/jre + JAVA_HOME=/usr/lib/jvm/jre + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' x '!=' x ']' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./tools/config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./tools/config.sub ++ basename ./tools/config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./tools/config.sub '/usr/lib/rpm/redhat/config.sub' -> './tools/config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./tools/config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./tools/config.guess ++ basename ./tools/config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./tools/config.guess '/usr/lib/rpm/redhat/config.guess' -> './tools/config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./tools/ltmain.sh + tee CONFIGURE.log ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=riscv64-redhat-linux-gnu --host=riscv64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info rdocdir=/usr/share/doc/R rincludedir=/usr/include/R rsharedir=/usr/share/R --with-system-tre --with-blas=flexiblas --with-lapack --with-tcl-config=/usr/lib64/tclConfig.sh --with-tk-config=/usr/lib64/tkConfig.sh --enable-R-shlib --enable-prebuilt-html --enable-R-profiling --enable-memory-profiling configure: WARNING: unrecognized options: --disable-dependency-tracking checking build system type... riscv64-redhat-linux-gnu checking host system type... riscv64-redhat-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /usr/bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... /usr/bin/sed checking for which... /usr/bin/which checking for less... /usr/bin/less checking for gtar... /usr/bin/gtar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 5.1... yes checking for ginstall-info... no checking for install-info... /usr/sbin/install-info checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... found zi4.sty checking for unzip... /usr/bin/unzip checking for zip... /usr/bin/zip checking for gzip... /usr/bin/gzip checking for bzip2... /usr/bin/bzip2 using default browser ... /usr/bin/xdg-open checking for /usr/bin/xdg-open... /usr/bin/xdg-open checking for working aclocal... found checking for working autoconf... found checking for working autoheader... found checking for bison... no checking for byacc... no checking for yacc... no checking for notangle... false checking for realpath... /usr/bin/realpath checking for pkg-config... /usr/bin/pkg-config checking for riscv64-redhat-linux-gnu-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking for sys/time.h... yes checking for sys/param.h... yes checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking how to run the C preprocessor... gcc -E looking for a modern Fortran compiler checking for riscv64-redhat-linux-gnu-gfortran... no checking for riscv64-redhat-linux-gnu-g95... no checking for riscv64-redhat-linux-gnu-xlf95... no checking for riscv64-redhat-linux-gnu-f95... no checking for riscv64-redhat-linux-gnu-fort... no checking for riscv64-redhat-linux-gnu-ifort... no checking for riscv64-redhat-linux-gnu-ifc... no checking for riscv64-redhat-linux-gnu-efc... no checking for riscv64-redhat-linux-gnu-pgfortran... no checking for riscv64-redhat-linux-gnu-pgf95... no checking for riscv64-redhat-linux-gnu-lf95... no checking for riscv64-redhat-linux-gnu-ftn... no checking for riscv64-redhat-linux-gnu-nagfor... no checking for riscv64-redhat-linux-gnu-xlf90... no checking for riscv64-redhat-linux-gnu-f90... no checking for riscv64-redhat-linux-gnu-pgf90... no checking for riscv64-redhat-linux-gnu-pghpf... no checking for riscv64-redhat-linux-gnu-epcf90... no checking for riscv64-redhat-linux-gnu-g77... no checking for riscv64-redhat-linux-gnu-xlf... no checking for riscv64-redhat-linux-gnu-f77... no checking for riscv64-redhat-linux-gnu-frt... no checking for riscv64-redhat-linux-gnu-pgf77... no checking for riscv64-redhat-linux-gnu-cf77... no checking for riscv64-redhat-linux-gnu-fort77... no checking for riscv64-redhat-linux-gnu-fl32... no checking for riscv64-redhat-linux-gnu-af77... no checking for gfortran... gfortran checking whether the compiler supports GNU Fortran... yes checking whether gfortran accepts -g... yes checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether g++ -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer can compile C++ code... yes checking how to run the C++ preprocessor... g++ -E checking whether __attribute__((visibility())) is supported... yes checking whether gcc accepts -fvisibility... yes checking whether g++ accepts -fvisibility... yes checking whether gfortran accepts -fvisibility... yes checking for riscv64-redhat-linux-gnu-gcc... no checking for riscv64-redhat-linux-gnu-objcc... no checking for riscv64-redhat-linux-gnu-objc... no checking for riscv64-redhat-linux-gnu-cc... no checking for riscv64-redhat-linux-gnu-CC... no checking for riscv64-redhat-linux-gnu-clang... no checking for gcc... gcc checking whether the compiler supports GNU Objective C... no checking whether gcc accepts -g... no checking whether gcc -std=gnu17 is a C17 compiler... yes checking whether gcc -std=gnu23 is a C23 compiler... yes checking whether gcc -std=gnu90 is a C90 compiler... yes checking whether gcc -std=gnu99 is a C99 compiler... yes checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert riscv64-redhat-linux-gnu file names to riscv64-redhat-linux-gnu format... func_convert_file_noop checking how to convert riscv64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for riscv64-redhat-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for riscv64-redhat-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for riscv64-redhat-linux-gnu-ar... (cached) ar checking for archiver @FILE support... @ checking for riscv64-redhat-linux-gnu-strip... no checking for strip... strip checking for riscv64-redhat-linux-gnu-ranlib... no checking for ranlib... ranlib checking for gawk... gawk checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for riscv64-redhat-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... 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from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/riscv64-redhat-linux/14 -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -lgfortran -lm checking how to get verbose linking output from gcc... -v checking for C libraries of gcc... -L/usr/lib/gcc/riscv64-redhat-linux/14 -L/lib64/lp64d/../lib64/lp64d -L/usr/lib64/lp64d/../lib64/lp64d -L/lib/../lib64/lp64d -L/usr/lib/../lib64/lp64d -L/lib64/lp64d -L/usr/lib64/lp64d -lgcc_s ./configure: line 27739: cd: /lib64/lp64d/../lib64/lp64d: No such file or directory ./configure: line 27739: cd: /usr/lib64/lp64d/../lib64/lp64d: No such file or directory ./configure: line 27767: cd: /lib64/lp64d/../lib64/lp64d: No such file or directory ./configure: line 27767: cd: /usr/lib64/lp64d/../lib64/lp64d: No such file or directory checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling 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(cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands configure: WARNING: unrecognized options: --disable-dependency-tracking R is now configured for riscv64-redhat-linux-gnu Source directory: . Installation directory: /usr C compiler: gcc -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer Fortran fixed-form compiler: gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules Default C++ compiler: g++ -std=gnu++17 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer C++11 compiler: g++ -std=gnu++11 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer C++14 compiler: g++ -std=gnu++14 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer C++17 compiler: g++ -std=gnu++17 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer C++20 compiler: g++ -std=gnu++20 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer C++23 compiler: g++ -std=gnu++23 -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer Fortran free-form compiler: gfortran -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules Obj-C compiler: Interfaces supported: X11, tcltk External libraries: pcre2, readline, BLAS(FlexiBlas), LAPACK(in blas), tre, curl, libdeflate Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, R profiling, memory profiling, static HTML, libdeflate for lazyload Capabilities skipped: Options not enabled: shared BLAS Recommended packages: yes + cat CONFIGURE.log + grep -A30 'R is now' - + make V=1 make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/m4' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/m4' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tools' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tools' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/html' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/html' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/etc' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/etc' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/share' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/share' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/scripts' creating src/scripts/R.fe make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/scripts' mkdir -p -- ../../bin make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/scripts' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/scripts' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include' mkdir -p -- ../../include make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include/R_ext' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/appl' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c integrate.c -o integrate.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c interv.c -o interv.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c maxcol.c -o maxcol.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c optim.c -o optim.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pretty.c -o pretty.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c uncmin.c -o uncmin.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dchdc.f -o dchdc.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dpbfa.f -o dpbfa.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dpbsl.f -o dpbsl.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dpoco.f -o dpoco.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dpodi.f -o dpodi.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dpofa.f -o dpofa.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dposl.f -o dposl.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dqrdc.f -o dqrdc.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dqrdc2.f -o dqrdc2.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dqrls.f -o dqrls.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dqrsl.f -o dqrsl.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dqrutl.f -o dqrutl.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dsvdc.f -o dsvdc.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dtrco.f -o dtrco.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dtrsl.f -o dtrsl.o ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/appl' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/appl' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mlutils.c -o mlutils.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c d1mach.c -o d1mach.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c i1mach.c -o i1mach.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fmax2.c -o fmax2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fmin2.c -o fmin2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fprec.c -o fprec.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fround.c -o fround.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ftrunc.c -o ftrunc.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sign.c -o sign.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fsign.c -o fsign.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c imax2.c -o imax2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c imin2.c -o imin2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chebyshev.c -o chebyshev.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c log1p.c -o log1p.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lgammacor.c -o lgammacor.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gammalims.c -o gammalims.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c stirlerr.c -o stirlerr.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bd0.c -o bd0.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gamma.c -o gamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lgamma.c -o lgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c beta.c -o beta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lbeta.c -o lbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c polygamma.c -o polygamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cospi.c -o cospi.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_i.c -o bessel_i.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_j.c -o bessel_j.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_k.c -o bessel_k.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_y.c -o bessel_y.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c choose.c -o choose.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c snorm.c -o snorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sexp.c -o sexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dgamma.c -o dgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pgamma.c -o pgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qgamma.c -o qgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rgamma.c -o rgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dbeta.c -o dbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pbeta.c -o pbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qbeta.c -o qbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rbeta.c -o rbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dunif.c -o dunif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c punif.c -o punif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qunif.c -o qunif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c runif.c -o runif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnorm.c -o dnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnorm.c -o pnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnorm.c -o qnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rnorm.c -o rnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dlnorm.c -o dlnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plnorm.c -o plnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qlnorm.c -o qlnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlnorm.c -o rlnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c df.c -o df.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pf.c -o pf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qf.c -o qf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rf.c -o rf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnf.c -o dnf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dt.c -o dt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pt.c -o pt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qt.c -o qt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rt.c -o rt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnt.c -o dnt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dchisq.c -o dchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pchisq.c -o pchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qchisq.c -o qchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rchisq.c -o rchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rnchisq.c -o rnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dbinom.c -o dbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pbinom.c -o pbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qbinom.c -o qbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rbinom.c -o rbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rmultinom.c -o rmultinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dcauchy.c -o dcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pcauchy.c -o pcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qcauchy.c -o qcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rcauchy.c -o rcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dexp.c -o dexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pexp.c -o pexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qexp.c -o qexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rexp.c -o rexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dgeom.c -o dgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pgeom.c -o pgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qgeom.c -o qgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rgeom.c -o rgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dhyper.c -o dhyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c phyper.c -o phyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qhyper.c -o qhyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rhyper.c -o rhyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnbinom.c -o dnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnbinom.c -o pnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnbinom.c -o qnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rnbinom.c -o rnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dpois.c -o dpois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ppois.c -o ppois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qpois.c -o qpois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rpois.c -o rpois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dweibull.c -o dweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pweibull.c -o pweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qweibull.c -o qweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rweibull.c -o rweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dlogis.c -o dlogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plogis.c -o plogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qlogis.c -o qlogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlogis.c -o rlogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnchisq.c -o dnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnchisq.c -o pnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnchisq.c -o qnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnbeta.c -o dnbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnbeta.c -o pnbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnbeta.c -o qnbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnf.c -o pnf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnt.c -o pnt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnf.c -o qnf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnt.c -o qnt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ptukey.c -o ptukey.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qtukey.c -o qtukey.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c toms708.c -o toms708.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c wilcox.c -o wilcox.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/unix' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Rembedded.c -o Rembedded.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dynload.c -o dynload.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c system.c -o system.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sys-unix.c -o sys-unix.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sys-std.c -o sys-std.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/unix' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/unix' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -DR_HOME='"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2"' \ -o Rscript ./Rscript.c make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/unix' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/unix' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making altclasses.d from altclasses.c making altrep.d from altrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making clippath.d from clippath.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making flexiblas.d from flexiblas.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making machine.d from machine.c making main.d from main.c making mapply.d from mapply.c making mask.d from mask.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making patterns.d from patterns.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c CommandLineArgs.c -o CommandLineArgs.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Rdynload.c -o Rdynload.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Renviron.c -o Renviron.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c RNG.c -o RNG.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agrep.c -o agrep.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c altclasses.c -o altclasses.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c altrep.c -o altrep.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c apply.c -o apply.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c arithmetic.c -o arithmetic.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c array.c -o array.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c attrib.c -o attrib.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bind.c -o bind.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c builtin.c -o builtin.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c character.c -o character.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c clippath.c -o clippath.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coerce.c -o coerce.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c colors.c -o colors.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c complex.c -o complex.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c connections.c -o connections.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c context.c -o context.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cum.c -o cum.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dcf.c -o dcf.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c datetime.c -o datetime.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c debug.c -o debug.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c deparse.c -o deparse.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c devices.c -o devices.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dotcode.c -o dotcode.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dounzip.c -o dounzip.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dstruct.c -o dstruct.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c duplicate.c -o duplicate.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c edit.c -o edit.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c engine.c -o engine.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c envir.c -o envir.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c errors.c -o errors.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c eval.c -o eval.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c flexiblas.c -o flexiblas.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c format.c -o format.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gevents.c -o gevents.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gram.c -o gram.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gram-ex.c -o gram-ex.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c graphics.c -o graphics.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c grep.c -o grep.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c identical.c -o identical.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c inlined.c -o inlined.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c inspect.c -o inspect.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c internet.c -o internet.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c iosupport.c -o iosupport.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lapack.c -o lapack.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c list.c -o list.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c localecharset.c -o localecharset.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c logic.c -o logic.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c machine.c -o machine.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c main.c -o main.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mapply.c -o mapply.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mask.c -o mask.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c match.c -o match.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c memory.c -o memory.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c names.c -o names.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c objects.c -o objects.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c options.c -o options.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c paste.c -o paste.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c patterns.c -o patterns.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c platform.c -o platform.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plot.c -o plot.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plot3d.c -o plot3d.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plotmath.c -o plotmath.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c print.c -o print.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c printarray.c -o printarray.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c printvector.c -o printvector.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c printutils.c -o printutils.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qsort.c -o qsort.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c radixsort.c -o radixsort.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c random.c -o random.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c raw.c -o raw.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c registration.c -o registration.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c relop.c -o relop.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlocale.c -o rlocale.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c saveload.c -o saveload.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c scan.c -o scan.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c seq.c -o seq.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c serialize.c -o serialize.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sort.c -o sort.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c source.c -o source.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c split.c -o split.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sprintf.c -o sprintf.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c startup.c -o startup.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c subassign.c -o subassign.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c subscript.c -o subscript.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c subset.c -o subset.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c summary.c -o summary.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sysutils.c -o sysutils.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c times.c -o times.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c unique.c -o unique.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c util.c -o util.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c version.c -o version.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c g_alab_her.c -o g_alab_her.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c g_cntrlify.c -o g_cntrlify.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c g_fontdb.c -o g_fontdb.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c g_her_glyph.c -o g_her_glyph.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c xxxpr.f -o xxxpr.o gcc -shared -fopenmp -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o clippath.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o flexiblas.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o machine.o main.o mapply.o mask.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` -lflexiblas -L -L -lgfortran -lm -lreadline -ltre -lpcre2-8 -ldeflate -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/bin/exec mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Rmain.c -o Rmain.o gcc -Wl,--export-dynamic -fopenmp -L"../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R.bin Rmain.o -lR make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/internet' making Rhttpd.d from Rhttpd.c making Rsock.d from Rsock.c making internet.d from internet.c making libcurl.d from libcurl.c making sock.d from sock.c making sockconn.d from sockconn.c make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/internet' gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -c Rsock.c -o Rsock.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -c internet.c -o internet.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -c libcurl.c -o libcurl.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -c sock.c -o sock.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fvisibility=hidden -c sockconn.c -o sockconn.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o sock.o sockconn.o -lcurl -lR make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/internet' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/modules make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/internet' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/internet' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/internet' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/lapack' making Lapack.d from Lapack.c make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/lapack' gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Lapack.c -o Lapack.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ../../main/flexiblas.c -o flexiblas.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o lapack.so Lapack.o flexiblas.o -lR -lflexiblas -L -L -lgfortran -lm make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/lapack' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/lapack' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/lapack' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/lapack' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/X11' making devX11.d from devX11.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/X11' gcc -I/usr/include/libpng16 -DWITH_GZFILEOP -I/usr/include/webp -DWITH_GZFILEOP -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/cairo -I/usr/include/libxml2 -I/usr/include/freetype2 -I/usr/include/libpng16 -DWITH_GZFILEOP -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c devX11.c -o devX11.o gcc -I/usr/include/libpng16 -DWITH_GZFILEOP -I/usr/include/webp -DWITH_GZFILEOP -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/cairo -I/usr/include/libxml2 -I/usr/include/freetype2 -I/usr/include/libpng16 -DWITH_GZFILEOP -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rotated.c -o rotated.o gcc -I/usr/include/libpng16 -DWITH_GZFILEOP -I/usr/include/webp -DWITH_GZFILEOP -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/cairo -I/usr/include/libxml2 -I/usr/include/freetype2 -I/usr/include/libpng16 -DWITH_GZFILEOP -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rbitmap.c -o rbitmap.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lpng16 -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm gcc -I/usr/include/libpng16 -DWITH_GZFILEOP -I/usr/include/webp -DWITH_GZFILEOP -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/cairo -I/usr/include/libxml2 -I/usr/include/freetype2 -I/usr/include/libpng16 -DWITH_GZFILEOP -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/pixman-1 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dataentry.c -o dataentry.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lpng16 -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/X11' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/X11' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/X11' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/X11' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' mkdir -p -- ../../library make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/profile' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/translations' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/translations' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/translations' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/base' building package 'base' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/base' mkdir -p -- ../../../library/base/demo make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/base' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' mkdir -p -- ../../../library/tools/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools/src' making text.d from text.c making init.d from init.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c making pdscan.d from pdscan.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c text.c -o text.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Rmd5.c -o Rmd5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c md5.c -o md5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c signals.c -o signals.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c install.c -o install.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c getfmts.c -o getfmts.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c http.c -o http.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gramLatex.c -o gramLatex.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gramRd.c -o gramRd.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pdscan.c -o pdscan.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' installing 'sysdata.rda' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/compiler' mkdir -p -- ../../../library/compiler/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/compiler' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/compiler' byte-compiling package 'compiler' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/compiler' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/compiler' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/base' byte-compiling package 'base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/base' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' byte-compiling package 'tools' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tools' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' mkdir -p -- ../../../library/utils/R mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils/src' making init.d from init.c making io.d from io.c making size.d from size.c making sock.d from sock.c making stubs.d from stubs.c making utils.d from utils.c making hashtab.d from hashtab.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c io.c -o io.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c size.c -o size.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sock.c -o sock.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c utils.c -o utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c hashtab.c -o hashtab.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o utils.so init.o io.o size.o sock.o stubs.o utils.o hashtab.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' installing 'sysdata.rda' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' byte-compiling package 'utils' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/utils' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/fonts/Roboto mkdir -p -- ../../../library/grDevices/fonts/Montserrat/static mkdir -p -- ../../../library/grDevices/icc make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices' make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src' making axis_scales.d from axis_scales.c making chull.d from chull.c making devices.d from devices.c making init.d from init.c making stubs.d from stubs.c making colors.d from colors.c making clippath.d from clippath.c making patterns.d from patterns.c making mask.d from mask.c making group.d from group.c making devCairo.d from devCairo.c making devPicTeX.d from devPicTeX.c making devPS.d from devPS.c making devQuartz.d from devQuartz.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c axis_scales.c -o axis_scales.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chull.c -o chull.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c devices.c -o devices.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c colors.c -o colors.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c patterns.c -o patterns.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c group.c -o group.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c devCairo.c -o devCairo.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c devPicTeX.c -o devPicTeX.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c devPS.c -o devPS.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c devQuartz.c -o devQuartz.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o group.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[7]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src/cairo' making cairoBM.d from cairoBM.c make[8]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src/cairo' make[9]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src/cairo' gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/harfbuzz -I/usr/include/cairo -I/usr/include/libxml2 -I/usr/include/freetype2 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/pixman-1 -I/usr/include/libpng16 -DWITH_GZFILEOP -I../../../../../src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cairoBM.c -o cairoBM.o gcc -shared -L"../../../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lcairo -lpng16 -L"../../../../../lib" -lR -lm make[9]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src/cairo' make[8]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src/cairo' make[7]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src/cairo' make[6]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices' byte-compiling package 'grDevices' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grDevices' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics' mkdir -p -- ../../../library/graphics/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics' make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics/src' making init.d from init.c making base.d from base.c making graphics.d from graphics.c making par.d from par.c making plot.d from plot.c making plot3d.d from plot3d.c making stem.d from stem.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c base.c -o base.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c graphics.c -o graphics.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c par.c -o par.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plot.c -o plot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plot3d.c -o plot3d.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c stem.c -o stem.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics' byte-compiling package 'graphics' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/graphics' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats' mkdir -p -- ../../../library/stats/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats' make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats/src' making init.d from init.c making kmeans.d from kmeans.c making ansari.d from ansari.c making bandwidths.d from bandwidths.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making line.d from line.c making smooth.d from smooth.c making prho.d from prho.c making swilk.d from swilk.c making ksmooth.d from ksmooth.c making loessc.d from loessc.c making monoSpl.d from monoSpl.c making isoreg.d from isoreg.c making Srunmed.d from Srunmed.c making dblcen.d from dblcen.c making distance.d from distance.c making hclust-utils.d from hclust-utils.c making nls.d from nls.c making rWishart.d from rWishart.c making HoltWinters.d from HoltWinters.c making PPsum.d from PPsum.c making arima.d from arima.c making burg.d from burg.c making filter.d from filter.c making mAR.d from mAR.c making pacf.d from pacf.c making starma.d from starma.c making port.d from port.c making family.d from family.c making sbart.d from sbart.c making approx.d from approx.c making loglin.d from loglin.c making lowess.d from lowess.c making massdist.d from massdist.c making splines.d from splines.c making lm.d from lm.c making complete_cases.d from complete_cases.c making cov.d from cov.c making deriv.d from deriv.c making fft.d from fft.c making fourier.d from fourier.c making model.d from model.c making optim.d from optim.c making optimize.d from optimize.c making integrate.d from integrate.c making random.d from random.c making distn.d from distn.c making zeroin.d from zeroin.c making rcont.d from rcont.c making influence.d from influence.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c kmeans.c -o kmeans.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ansari.c -o ansari.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bandwidths.c -o bandwidths.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chisqsim.c -o chisqsim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c d2x2xk.c -o d2x2xk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fexact.c -o fexact.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c kendall.c -o kendall.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ks.c -o ks.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c line.c -o line.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c smooth.c -o smooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c prho.c -o prho.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c swilk.c -o swilk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ksmooth.c -o ksmooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c loessc.c -o loessc.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c monoSpl.c -o monoSpl.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c isoreg.c -o isoreg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Srunmed.c -o Srunmed.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dblcen.c -o dblcen.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distance.c -o distance.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c hclust-utils.c -o hclust-utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c nls.c -o nls.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rWishart.c -o rWishart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c HoltWinters.c -o HoltWinters.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c PPsum.c -o PPsum.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c arima.c -o arima.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c burg.c -o burg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c filter.c -o filter.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mAR.c -o mAR.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pacf.c -o pacf.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c starma.c -o starma.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c port.c -o port.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c family.c -o family.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sbart.c -o sbart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c approx.c -o approx.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c loglin.c -o loglin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lowess.c -o lowess.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c massdist.c -o massdist.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c splines.c -o splines.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lm.c -o lm.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c complete_cases.c -o complete_cases.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cov.c -o cov.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c deriv.c -o deriv.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fft.c -o fft.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fourier.c -o fourier.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c model.c -o model.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c optim.c -o optim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c optimize.c -o optimize.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c integrate.c -o integrate.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c random.c -o random.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c distn.c -o distn.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c zeroin.c -o zeroin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rcont.c -o rcont.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c influence.c -o influence.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c bsplvd.f -o bsplvd.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c bvalue.f -o bvalue.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c bvalus.f -o bvalus.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c loessf.f -o loessf.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c ppr.f -o ppr.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c qsbart.f -o qsbart.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c sgram.f -o sgram.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c sinerp.f -o sinerp.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c sslvrg.f -o sslvrg.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c stxwx.f -o stxwx.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c hclust.f -o hclust.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c kmns.f -o kmns.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c eureka.f -o eureka.o gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c stl.f -o stl.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c portsrc.f -o portsrc.o portsrc.f:6574:44: 6574 | INTEGER DEG,HEAD,IC,IP,IPL,IPU,IR,JCOL,JP,JPL,JPU,L,MAXINC, | ^ Warning: ‘jcol’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:5658:18: 5658 | IF (ALPHAK .GE. TWOPSI*PSIFAC) GO TO 310 | ^ Warning: ‘psifac’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:5378:62: 5378 | 1 LK, OLDPHI, PHI, PHIMAX, PHIMIN, PSIFAC, RAD, | ^ note: ‘psifac’ was declared here portsrc.f:5521:51: 5521 | IF (ALPHAK .LE. ZERO .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) | ^ Warning: ‘alphak’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:5377:37: 5377 | DOUBLE PRECISION A, ADI, ALPHAK, B, DFACSQ, DST, DTOL, D1, D2, | ^ note: ‘alphak’ was declared here portsrc.f:10324:72: 10324 | LK = DMAX1(LK, PHI*W(PHIPIN)) | ^ Warning: ‘phi’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10077:34: 10077 | 1 OLDPHI, PHI, PHIMAX, PHIMIN, PSIFAC, RAD, RADSQ, | ^ note: ‘phi’ was declared here portsrc.f:10466:10: 10466 | IF (KA .GE. KAMIN) GO TO 340 | ^ Warning: ‘kamin’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10075:32: 10075 | 1 J, K, KALIM, KAMIN, K1, LK0, PHIPIN, Q, Q0, UK0, X | ^ note: ‘kamin’ was declared here portsrc.f:10329:55: 10329 | IF (-V(DST0) .GE. ALPHAK .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) | ^ Warning: ‘alphak’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:10076:29: 10076 | DOUBLE PRECISION ALPHAK, AKI, AKK, DELTA, DST, EPS, GTSTA, LK, | ^ note: ‘alphak’ was declared here portsrc.f:12246:72: 12246 | V(DST0) = DNWTST | ^ Warning: ‘dnwtst’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:12105:29: 12105 | DOUBLE PRECISION DNWTST, GHINVG, GNORM, GNORM0, NRED, PRED, RAD, | ^ note: ‘dnwtst’ was declared here portsrc.f:12243:72: 12243 | V(NREDUC) = NRED | ^ Warning: ‘nred’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:12105:58: 12105 | DOUBLE PRECISION DNWTST, GHINVG, GNORM, GNORM0, NRED, PRED, RAD, | ^ note: ‘nred’ was declared here portsrc.f:2514:72: 2514 | 60 V(DST0) = DS0 | ^ Warning: ‘ds0’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:2457:26: 2457 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: ‘ds0’ was declared here portsrc.f:2515:72: 2515 | V(NREDUC) = NRED | ^ Warning: ‘nred’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:2457:32: 2457 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: ‘nred’ was declared here portsrc.f:8173:72: 8173 | 90 V(DST0) = DS0 | ^ Warning: ‘ds0’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:8086:26: 8086 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: ‘ds0’ was declared here portsrc.f:8174:72: 8174 | V(NREDUC) = NRED | ^ Warning: ‘nred’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:8086:32: 8086 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ note: ‘nred’ was declared here portsrc.f:8652:72: 8652 | 210 IV(FDH) = HES | ^ Warning: ‘hes’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:8450:25: 8450 | INTEGER GSAVE1, HES, HMI, HPI, HPM, I, K, KIND, L, M, MM1, MM1O2, | ^ note: ‘hes’ was declared here portsrc.f:3587:10: 3587 | IF (LIV .LT. MIV2) GO TO 300 | ^ Warning: ‘miv2’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:3520:54: 3520 | INTEGER ALG1, I, II, IV1, J, K, L, M, MIV1, MIV2, NDFALT, PARSV1, | ^ note: ‘miv2’ was declared here portsrc.f:12079:72: 12079 | 270 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) | ^ Warning: ‘g1’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:11822:16: 11822 | INTEGER G1, GI, I, IV1, IVMODE, JTOL1, L, LH, NN, QTR1, | ^ note: ‘g1’ was declared here portsrc.f:458:72: 458 | 300 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) | ^ Warning: ‘g1’ may be used uninitialized [-Wmaybe-uninitialized] portsrc.f:157:16: 157 | INTEGER G1, GI, I, IV1, IVMODE, JTOL1, K, L, LH, NN, QTR1, | ^ note: ‘g1’ was declared here gfortran -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c lminfl.f -o lminfl.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -lflexiblas -L -L -lgfortran -lm -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats' byte-compiling package 'stats' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/datasets' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/datasets' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods' mkdir -p -- ../../../library/methods/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods' make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods/src' making do_substitute_direct.d from do_substitute_direct.c making init.d from init.c making methods_list_dispatch.d from methods_list_dispatch.c making slot.d from slot.c making class_support.d from class_support.c making tests.d from tests.c making utils.d from utils.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c do_substitute_direct.c -o do_substitute_direct.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c methods_list_dispatch.c -o methods_list_dispatch.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c slot.c -o slot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c class_support.c -o class_support.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c tests.c -o tests.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c utils.c -o utils.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods' byte-compiling package 'methods' initializing class and method definitions ... done make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/methods' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid' mkdir -p -- ../../../library/grid/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid' make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid/src' making clippath.d from clippath.c making gpar.d from gpar.c making grid.d from grid.c making just.d from just.c making layout.d from layout.c making mask.d from mask.c making matrix.d from matrix.c making path.d from path.c making register.d from register.c making state.d from state.c making typeset.d from typeset.c making unit.d from unit.c making util.d from util.c making viewport.d from viewport.c gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gpar.c -o gpar.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c grid.c -o grid.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c just.c -o just.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c layout.c -o layout.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c matrix.c -o matrix.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c path.c -o path.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c register.c -o register.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c state.c -o state.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c typeset.c -o typeset.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c unit.c -o unit.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c util.c -o util.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c viewport.c -o viewport.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o path.o register.o state.o typeset.o unit.o util.o viewport.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid' byte-compiling package 'grid' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/grid' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines' mkdir -p -- ../../../library/splines/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines' make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines/src' making splines.d from splines.c gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c splines.c -o splines.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o splines.so splines.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines' byte-compiling package 'splines' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/splines' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats4' mkdir -p -- ../../../library/stats4/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats4' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats4' byte-compiling package 'stats4' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats4' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/stats4' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk' mkdir -p -- ../../../library/tcltk/exec make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk/src' making init.d from init.c making tcltk.d from tcltk.c making tcltk_unix.d from tcltk_unix.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c tcltk.c -o tcltk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c tcltk_unix.c -o tcltk_unix.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib64 -ltcl8.6 -L/usr/lib64 -ltk8.6 -lX11 -lm -L../../../../lib -lR make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk/src' mkdir -p -- ../../../../library/tcltk/libs make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk/src' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk' byte-compiling package 'tcltk' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/tcltk' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel' mkdir -p -- ../../../library/parallel/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel' make[5]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel/src' making init.d from init.c making rngstream.d from rngstream.c making fork.d from fork.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rngstream.c -o rngstream.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fork.c -o fork.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel' make[4]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel' byte-compiling package 'parallel' make[4]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/parallel' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/base' installing parsed NAMESPACE files make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests' you should 'make docs' now ... make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' creating doc/NEWS creating doc/NEWS.pdf make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' creating doc/manual/R-FAQ.html creating doc/manual/version.texi creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/html' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/html' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' installing parsed Rd make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' base stats utils methods graphics grDevices datasets grid tools tcltk splines stats4 compiler parallel make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' building/updating package metadata ... make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' writing package indices make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' building all R object docs converting help for package 'base' abbreviate html agrep html all.equal html all html allnames html any html aperm html append html apply html args html Arithmetic html array html array2DF html as.data.frame html as.Date html as.environment html as.function html as.POSIXlt html AsIs html asplit html assign html assignOps html attach html attr html attributes html autoload html backsolve html balancePOSIXlt html base-defunct html base-deprecated html base-internal html base-package html basename html Bessel html bincode html bindenv html bitwise html body html bquote html browser html browserText html builtins html by html c html call html callCC html CallExternal html capabilities html cat html cbind html char.expand html character html charmatch html chartr html chkDots html chol html chol2inv html chooseOpsMethod html class html col html colnames html Colon html colSums html commandArgs html comment html Comparison html complex html conditions html conflicts html connections html Constants html contributors html Control html copyright html crossprod html Cstack_info html cumsum html curlGetHeaders html cut.POSIXt html cut html data.class html data.frame html data.matrix html dataframeHelpers html date html Dates html DateTimeClasses html dcf html debug html declare html Defunct html delayedAssign html deparse html deparseOpts html Deprecated html det html detach html dev html diag html diff html difftime html dim html dimnames html do.call html dontCheck html dots html double html dput html drop html droplevels html dump html duplicated html dynload html eapply html eigen html encodeString html Encoding html environment html EnvVar html eval html exists html expand.grid html expression html Extract.data.frame html Extract.factor html Extract html Extremes html extSoftVersion html factor html file.access html file.choose html file.info html file.path html file.show html files html files2 html find.package html findInterval html force html forceAndCall html Foreign-internal html Foreign html formals html format.info html format.pval html format html formatc html formatDL html function html funprog html gc html gc.time html gctorture html get html getCallingDLL html getDLLRegisteredRoutines html getLoadedDLLs html getNativeSymbolInfo html gettext html getwd html gl html grep html grepRaw html groupGeneric html grouping html gzcon html hexmode html Hyperbolic html iconv html icuSetCollate html identical html identity html ifelse html integer html interaction html interactive html Internal html InternalMethods html invisible html is.finite html is.function html is.language html is.object html is.recursive html is.single html is.unsorted html ISOdatetime html isS4 html isSymmetric html jitter html kappa html kronecker html l10n_info html La_library html La_version html labels html lapply html Last.value html lazyload html length html lengths html levels html libcurlVersion html libPaths html library.dynam html library html license html list.files html list html list2DF html list2env html load html locales html Log html Logic html logical html LongVectors html lower.tri html ls html make.names html make.unique html mapply html marginSums html mat.or.vec html match.arg html match.call html match.fun html match html MathFun html matmult html matrix html maxCol html mean html memCompress html memlimits html Memory-limits html memory.profile html Memory html merge html message html missing html mode html mtfrm html NA html name html names html nargs html nchar html nlevels html noquote html norm html normalizePath html notyet html nrow html ns-dblcolon html ns-hooks html ns-internal html ns-load html ns-reflect html ns-topenv html NULL html numeric_version html numeric html NumericConstants html octmode html on.exit html Ops.Date html options html order html outer html Paren html parse html paste html path.expand html pcre_config html pipeOp html Platform html plot html pmatch html polyroot html pos.to.env html pretty html Primitive html print.dataframe html print.default html print html prmatrix html proc.time html prod html proportions html pushBack html qr html qraux html quit html Quotes html Random-user html Random html range html rank html rapply html raw html rawConnection html rawConversion html RdUtils html readBin html readChar html readline html readLines html readRDS html readRenviron html Recall html reg.finalizer html regex html regmatches html rep html replace html Reserved html rev html Rhome html rle html rm html round.POSIXt html Round html row.names html row html rowsum html S3method html sample html save html scale html scan html search html seek html seq.Date html seq.POSIXt html seq html sequence html serialize html sets html setTimeLimit html showConnections html shQuote html sign html sink html slice.index html slotOp html socketSelect html solve html sort_by html sort html source html Special html split html sprintf html sQuote html srcfile html StackOverflows html standardGeneric html startsWith html Startup html stop html stopifnot html strptime html strrep html strsplit html strtoi html strtrim html structure html strwrap html subset html substitute html substr html sum html summary html svd html sweep html switch html Syntax html Sys.getenv html Sys.getpid html Sys.glob html Sys.info html Sys.localeconv html sys.parent html Sys.readlink html Sys.setenv html Sys.setFileTime html Sys.sleep html sys.source html Sys.time html Sys.which html system.file html system html system.time html system2 html t html table html tabulate html Tailcall html tapply html taskCallback html taskCallbackManager html taskCallbackNames html tempfile html textconnections html tilde html timezones html toString html trace html traceback html tracemem html transform html Trig html trimws html try html typeof html unique html units html unlink html unlist html unname html use html UseMethod html userhooks html utf8Conversion html UTF8filepaths html validUTF8 html vector html Vectorize html Version html warning html warnings html weekday.POSIXt html which.min html which html with html withVisible html write html writeLines html xtfrm html zapsmall html zMachine html zpackages html zScript html zutils html Signals html converting help for package 'tools' add_datalist html assertCondition html bibstyle html buildVignette html buildVignettes html charsets html check_packages_in_dir html checkFF html checkMD5sums html checkPoFiles html checkRd html checkRdaFiles html checkTnF html checkVignettes html codoc html compactPDF html CRANtools html delimMatch html dependsOnPkgs html encoded html fileutils html find_gs_cmd html getVignetteInfo html HTMLheader html HTMLlinks html loadRdMacros html make_translations_pkg html makeLazyLoading html makevars html matchConcordance html md5sum html package_dependencies html package_native_routine_registration_skeleton html parse_Rd html parseLatex html pkg2HTML html print.via.format html pskill html psnice html QC html Rcmd html Rd2HTML html Rd2txt_options html Rdiff html Rdindex html RdTextFilter html Rdutils html read.00Index html showNonASCII html startDynamicHelp html SweaveTeXFilter html testInstalledPackage html texi2dvi html toHTML html tools-defunct html tools-deprecated html tools-package html toRd html toTitleCase html undoc html update_pkg_po html updatePACKAGES html userdir html vignetteEngine html vignetteInfo html writePACKAGES html xgettext html converting help for package 'utils' adist html alarm html apropos html aregexec html arrangeWindows html askYesNo html aspell-utils html aspell html available.packages html BATCH html bibentry html browseEnv html browseURL html browseVignettes html bug.report html capture.output html changedFiles html charClass html choose.dir html choose.files html chooseBioCmirror html chooseCRANmirror html citation html cite html citEntry html clipboard html close.socket html combn html compareVersion html COMPILE html contrib.url html count.fields html create.post html data html dataentry html debugcall html debugger html demo html DLL.version html download.file html download.packages html edit.data.frame html edit html example html file.edit html filetest html findCRANmirror html findLineNum html fix html flush.console html format html getAnywhere html getFromNamespace html getParseData html getS3method html getWindowsHandle html getWindowsHandles html glob2rx html globalVariables html hashtab html hasName html head html help html help.request html help.search html help.start html hsearch-utils html install.packages html INSTALL html installed.packages html isS3method html isS3stdGen html LINK html localeToCharset html ls_str html maintainer html make.packages.html html make.socket html memory.size html menu html methods html mirrorAdmin html modifyList html news html nsl html object.size html package.skeleton html packageDescription html packageName html packageStatus html page html person html personList html PkgUtils html process.events html prompt html promptData html promptPackage html Question html rcompgen html Rconsole html read.DIF html read.fortran html read.fwf html read.socket html read.table html readRegistry html recover html relist html remove.packages html REMOVE html removeSource html RHOME html roman html Rprof html Rprofmem html Rscript html RShowDoc html RSiteSearch html rtags html Rtangle html RweaveLatex html savehistory html select.list html sessionInfo html setRepositories html setWindowTitle html SHLIB html shortPathName html sourceutils html stack html str html strcapture html summaryRprof html Sweave html SweaveSyntConv html SweaveUtils html tar html toLatex html txtProgressBar html type.convert html untar html unzip html update.packages html upgrade html url.show html URLencode html utils-defunct html utils-deprecated html utils-internal html utils-package html View html vignette html warnErrList html winDialog html winextras html winMenus html winProgressBar html write.table html zip html converting help for package 'grDevices' adjustcolor html as.graphicsAnnot html as.raster html axisTicks html boxplot.stats html bringToTop html cairo html cairoSymbolFont html check.options html chull html cm html col2rgb html colorRamp html colors html contourLines html convertColor html densCols html dev.capabilities html dev.capture html dev.flush html dev.interactive html dev html dev.size html dev2 html dev2bitmap html devAskNewPage html Devices html embedFonts html extendrange html getGraphicsEvent html glyphInfo html gray.colors html gray html grDevices-internal html grDevices-package html grSoftVersion html hcl html Hershey html hsv html Japanese html make.rgb html msgWindow html n2mfrow html nclass html palette html palettes html pdf.options html pdf html pictex html plotmath html postscript html postscriptFonts html pretty.Date html ps.options html quartz html quartzFonts html recordGraphics html recordplot html rgb html rgb2hsv html trans3d html Type1Font html windows.options html windows html windowsFonts html x11 html x11Fonts html xfig html xy.coords html xyTable html xyz.coords html png html savePlot html converting help for package 'graphics' abline html arrows html assocplot html axis.POSIXct html axis html axTicks html barplot html box html boxplot.matrix html boxplot html bxp html cdplot html clip html contour html convertXY html coplot html curve html dotchart html filled.contour html fourfoldplot html frame html graphics-defunct html graphics-package html grid html hist.POSIXt html hist html identify html image html layout html legend html lines html locator html matplot html mosaicplot html mtext html pairs html panel.smooth html par html persp html pie html plot.dataframe html plot.default html plot.design html plot.factor html plot.formula html plot.raster html plot.table html plot.window html plot.xy html plothistogram html points html polygon html polypath html rasterImage html rect html rug html screen html segments html smoothScatter html spineplot html stars html stem html stripchart html strwidth html sunflowerplot html symbols html text html title html units html xspline html zAxis html converting help for package 'stats' acf html acf2AR html add1 html addmargins html aggregate html AIC html alias html anova.glm html anova.lm html anova.mlm html anova html ansari.test html aov html approxfun html ar.ols html ar html arima html arima.sim html arima0 html ARMAacf html ARMAtoMA html as.hclust html asOneSidedFormula html ave html bandwidth html bartlett.test html Beta html binom.test html Binomial html biplot.princomp html biplot html birthday html box.test html cancor html case.names html Cauchy html checkMFClasses html chisq.test html Chisquare html cmdscale html coef html complete.cases html confint html constrOptim html contrast html contrasts html convolve html cophenetic html cor html cor.test html cov.wt html cpgram html cutree html decompose html delete.response html dendrapply html dendrogram html density html deriv html deviance html df.residual html diffinv html dist html Distributions html dummy.coef html ecdf html eff.aovlist html effects html embed html expand.model.frame html Exponential html extractAIC html factanal html factor.scope html family html Fdist html fft html filter html fisher.test html fitted.values html fivenum html fligner.test html formula.nls html formula html friedman.test html ftable.formula html ftable html GammaDist html Geometric html getInitial html glm.control html glm html glm.summaries html hclust html heatmap html HoltWinters html Hypergeometric html identify.hclust html influence.measures html integrate html interaction.plot html IQR html is.empty html isoreg html KalmanLike html kernapply html kernel html kmeans html kruskal.test html ks.test html ksmooth html lag.plot html lag html line html listof html lm.influence html lm html lm.summaries html lmfit html loadings html loess.control html loess html Logistic html logLik html loglin html Lognormal html lowess html ls.diag html ls.print html lsfit html mad html mahalanobis html make.link html makepredictcall html manova html mantelhaen.test html mauchly.test html mcnemar.test html median html medpolish html model.extract html model.frame html model.matrix html model.tables html monthplot html mood.test html Multinom html na.action html na.contiguous html na.fail html nafns html naprint html NegBinomial html nextn html nlm html nlminb html nls.control html nls html NLSstAsymptotic html NLSstClosestX html NLSstLfAsymptote html NLSstRtAsymptote html nobs html Normal html numericDeriv html offset html oneway.test html optim html optimize html order.dendrogram html p.adjust html Pair html pairwise.prop.test html pairwise.t.test html pairwise.table html pairwise.wilcox.test html plot.acf html plot.density html plot.HoltWinters html plot.isoreg html plot.lm html plot.ppr html plot.profile.nls html plot.profile html plot.spec html plot.stepfun html plot.ts html Poisson html poisson.test html poly html power.anova.test html power.prop.test html power html power.t.test html pp.test html ppoints html ppr html prcomp html predict.arima html predict.glm html predict.HoltWinters html predict.lm html predict.loess html predict.nls html predict html predict.smooth.spline html preplot html princomp html print.power.htest html print.ts html printCoefmat html profile.glm html profile.nls html profile html proj html prop.test html prop.trend.test html qqnorm html quade.test html quantile html r2dtable html read.ftable html rect.hclust html relevel html reorder.dendrogram html reorder.factor html replications html reshape html residuals html runmed html rWishart html scatter.smooth html screeplot html sd html se.contrast html selfStart html setNames html shapiro.test html sigma html SignRank html simulate html Smirnov html smooth html smooth.spline html smoothEnds html sortedXyData html spec.ar html spec.pgram html spec.taper html spectrum html splinefun html SSasymp html SSasympOff html SSasympOrig html SSbiexp html SSD html SSfol html SSfpl html SSgompertz html SSlogis html SSmicmen html SSweibull html start html stat.anova html stats-defunct html stats-deprecated html stats-package html step html stepfun html stl html stlmethods html StructTS html summary.aov html summary.glm html summary.lm html summary.manova html summary.nls html summary.princomp html supsmu html symnum html t.test html TDist html termplot html terms.formula html terms.object html terms html time html toeplitz html ts-methods html ts.plot html ts html ts.union html tsdiag html tsp html tsSmooth html Tukey html TukeyHSD html Uniform html uniroot html update.formula html update html var.test html varimax html vcov html Weibull html weighted.mean html weighted.residuals html weights html wilcox.test html Wilcoxon html window html xtabs html zC html converting help for package 'datasets' ability.cov html airmiles html AirPassengers html airquality html anscombe html attenu html attitude html austres html beavers html BJsales html BOD html cars html ChickWeight html chickwts html co2 html crimtab html datasets-package html discoveries html DNase html esoph html euro html eurodist html EuStockMarkets html faithful html Formaldehyde html freeny html HairEyeColor html Harman23.cor html Harman74.cor html Indometh html infert html InsectSprays html iris html islands html JohnsonJohnson html LakeHuron html lh html LifeCycleSavings html Loblolly html longley html lynx html morley html mtcars html nhtemp html Nile html nottem html npk html occupationalStatus html Orange html OrchardSprays html PlantGrowth html precip html presidents html pressure html Puromycin html quakes html randu html rivers html rock html sleep html stackloss html state html sunspot.month html sunspot.year html sunspots html swiss html Theoph html Titanic html ToothGrowth html treering html trees html UCBAdmissions html UKDriverDeaths html UKgas html UKLungDeaths html USAccDeaths html USArrests html USJudgeRatings html USPersonalExpenditure html uspop html VADeaths html volcano html warpbreaks html women html WorldPhones html WWWusage html zCO2 html converting help for package 'methods' as html BasicClasses html callGeneric html canCoerce html cbind2 html Classes_Details html Classes html classesToAM html className html classRepresentation-class html Documentation html dotsMethods html EmptyMethodsList-class html EnvironmentClass html evalSource html findClass html findMethods html fixPrevious html genericFunction-class html GenericFunctions html getClass html getMethod html getPackageName html hasArg html implicitGeneric html inheritedSlotNames html initialize-methods html Introduction html is html isSealedMethod html LanguageClasses html languageEl html LinearMethodsList-class html localRefClass html method.skeleton html MethodDefinition-class html Methods_Details html Methods_for_Nongenerics html Methods_for_S3 html methods-defunct html methods-deprecated html methods-package html Methods html MethodsList-class html MethodsList html MethodSupport html methodUtilities html MethodWithNext-class html new html NextMethod html nonStructure-class html ObjectsWithPackage-class html promptClass html promptMethods html RClassUtils html refClass html removeMethod html representation html RMethodUtils html S3Part html S4groupGeneric html SClassExtension-class html selectSuperClasses html setAs html setClass html setClassUnion html setGeneric html setGroupGeneric html setIs html setLoadActions html setMethod html setOldClass html setSClass html show html showMethods html signature-class html slot html stdRefClass html StructureClasses html substituteDirect html testInheritedMethods html TraceClasses html validObject html zBasicFunsList html converting help for package 'grid' absolute.size html arrow html as.mask html calcStringMetric html current.viewport html dataViewport html depth html deviceLoc html drawDetails html editDetails html editViewport html explode html gEdit html getNames html gpar html gPath html grid-defunct html grid-internal html grid-package html grid.add html grid.bezier html grid.cap html grid.circle html grid.clip html grid.convert html grid.copy html grid.curve html grid.delay html grid.display.list html grid.DLapply html grid.draw html grid.edit html grid.force html grid.frame html grid.function html grid.get html grid.glyph html grid.grab html grid.grep html grid.grill html grid.grob html grid.group html grid.layout html grid.lines html grid.locator html grid.ls html grid.move.to html grid.newpage html grid.null html grid.pack html grid.path html grid.place html grid.plot.and.legend html grid.points html grid.polygon html grid.pretty html grid.raster html Grid html grid.record html grid.rect html grid.refresh html grid.remove html grid.reorder html grid.roundrect html grid.segments html grid.set html grid.show.layout html grid.show.viewport html grid.stroke html grid.text html grid.xaxis html grid.xspline html grid.yaxis html gridCoords html grobCoords html grobName html grobWidth html grobX html legendGrob html makeContent html patterns html plotViewport html resolveRasterSize html showGrob html showViewport html stringWidth html unit.c html unit.length html unit.pmin html unit html unit.rep html unitType html valid.just html validDetails html viewport html viewports html viewportTransform html vpPath html widthDetails html xDetails html xsplinePoints html converting help for package 'splines' asVector html backSpline html bs html interpSpline html ns html periodicSpline html polySpline html predict.bs html predict.bSpline html splineDesign html splineKnots html splineOrder html splines-package html xyVector html converting help for package 'stats4' coef-methods html confint-methods html logLik-methods html mle-class html mle html plot-methods html profile-methods html profile.mle-class html show-methods html stats4-package html summary-methods html summary.mle-class html update-methods html vcov-methods html converting help for package 'tcltk' TclInterface html tclServiceMode html tcltk-defunct html tcltk-package html tk_choose.dir html tk_choose.files html tk_messageBox html tk_select.list html TkCommands html tkpager html tkProgressBar html tkStartGUI html TkWidgetcmds html TkWidgets html converting help for package 'compiler' compile html converting help for package 'parallel' clusterApply html detectCores html makeCluster html parallel-package html RngStream html splitIndices html children html mcaffinity html mcfork html mclapply html mcparallel html pvec html make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/Recommended' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/Recommended' begin installing recommended package MASS * installing *source* package ‘MASS’ ... ** package ‘MASS’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpsQzzm3/R.INSTALL390957f828ab/MASS/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c MASS.c -o MASS.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lqs.c -o lqs.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o MASS.so MASS.o lqs.o -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpsQzzm3/R.INSTALL390957f828ab/MASS/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/MASS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘MASS’ finding HTML links ... done Aids2 html Animals html Boston html Cars93 html Cushings html DDT html GAGurine html Insurance html MASS-internal html Melanoma html Null html OME html Pima.tr html Rabbit html Rubber html SP500 html Sitka html Sitka89 html Skye html Traffic html UScereal html UScrime html VA html abbey html accdeaths html addterm html anorexia html anova.negbin html area html bacteria html bandwidth.nrd html bcv html beav1 html beav2 html biopsy html birthwt html boxcox html cabbages html caith html cats html cement html chem html con2tr html confint html contr.sdif html coop html corresp html cov.rob html cov.trob html cpus html crabs html deaths html denumerate html dose.p html drivers html dropterm html eagles html epil html eqscplot html farms html fgl html fitdistr html forbes html fractions html galaxies html gamma.dispersion html gamma.shape.glm html gehan html genotype html geyser html gilgais html ginv html glm.convert html glm.nb html glmmPQL html hills html hist.scott html housing html huber html hubers html immer html isoMDS html kde2d html lda html ldahist html leuk html lm.gls html lm.ridge html loglm html loglm1 html logtrans html lqs html mammals html mca html mcycle html menarche html michelson html minn38 html motors html muscle html mvrnorm html negative.binomial html newcomb html nlschools html npk html npr1 html oats html painters html pairs.lda html parcoord html petrol html phones html plot.lda html plot.mca html polr html predict.glmmPQL html predict.lda html predict.lqs html predict.mca html predict.qda html profile.glm html qda html quine html rational html renumerate html rlm html rms.curv html rnegbin html road html rotifer html sammon html ships html shoes html shrimp html shuttle html snails html stdres html steam html stepAIC html stormer html studres html summary.loglm html summary.negbin html summary.rlm html survey html synth.tr html theta.md html topo html truehist html ucv html waders html whiteside html width.SJ html write.matrix html wtloss html ** building package indices ** testing if installed package can be loaded * DONE (MASS) Making 'packages.html' ... done begin installing recommended package lattice * installing *source* package ‘lattice’ ... ** package ‘lattice’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpXEAVOF/R.INSTALL393a4c37691c/lattice/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c threeDplot.c -o threeDplot.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o lattice.so init.o threeDplot.o -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpXEAVOF/R.INSTALL393a4c37691c/lattice/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/lattice/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘lattice’ finding HTML links ... done Lattice html Rows html USMortality html axis.default html banking html barchart.table html barley html cloud html draw.colorkey html draw.key html environmental html ethanol html histogram html interaction html lattice.options html latticeParseFormula html level.colors html levelplot html llines html lset html make.groups html melanoma html oneway html packet.panel.default html panel.axis html panel.barchart html panel.bwplot html panel.cloud html panel.densityplot html panel.dotplot html panel.functions html panel.histogram html panel.levelplot html panel.loess html panel.number html panel.pairs html panel.parallel html panel.qqmath html panel.qqmathline html panel.smoothScatter html panel.spline html panel.stripplot html panel.superpose html panel.violin html panel.xyplot html prepanel.default html prepanel.functions html print.trellis html qq html qqmath html rfs html shingles html simpleKey html simpleTheme html singer html splom html standard.theme html strip.default html tmd html trellis.device html trellis.object html trellis.par.get html update.trellis html utilities.3d html xyplot html xyplot.ts html ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (lattice) Making 'packages.html' ... done begin installing recommended package Matrix * installing *source* package ‘Matrix’ ... ** package ‘Matrix’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Csparse.c -o Csparse.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c attrib.c -o attrib.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bind.c -o bind.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cholmod-common.c -o cholmod-common.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cholmod-etc.c -o cholmod-etc.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coerce.c -o coerce.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cs-etc.c -o cs-etc.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dense.c -o dense.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c determinant.c -o determinant.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c expm.c -o expm.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c factor.c -o factor.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c idz.c -o idz.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c kappa.c -o kappa.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c matmult.c -o matmult.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c objects.c -o objects.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c perm.c -o perm.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c solve.c -o solve.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sparse.c -o sparse.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c subassign.c -o subassign.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c subscript.c -o subscript.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c utils-R.c -o utils-R.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c utils.c -o utils.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c validity.c -o validity.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I"SuiteSparse/SuiteSparse_config" -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c vector.c -o vector.o cd SuiteSparse/CHOLMOD && make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" make[4]: Entering directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/CHOLMOD' gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Check/cholmod_check.c -o Check/cholmod_check.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Check/cholmod_l_check.c -o Check/cholmod_l_check.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Check/cholmod_read.c -o Check/cholmod_read.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Check/cholmod_l_read.c -o Check/cholmod_l_read.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Check/cholmod_write.c -o Check/cholmod_write.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Check/cholmod_l_write.c -o Check/cholmod_l_write.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_amd.c -o Cholesky/cholmod_amd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_amd.c -o Cholesky/cholmod_l_amd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_analyze.c -o Cholesky/cholmod_analyze.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_analyze.c -o Cholesky/cholmod_l_analyze.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_colamd.c -o Cholesky/cholmod_colamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_colamd.c -o Cholesky/cholmod_l_colamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_etree.c -o Cholesky/cholmod_etree.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_etree.c -o Cholesky/cholmod_l_etree.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_factorize.c -o Cholesky/cholmod_factorize.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_factorize.c -o Cholesky/cholmod_l_factorize.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_postorder.c -o Cholesky/cholmod_postorder.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_postorder.c -o Cholesky/cholmod_l_postorder.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_rcond.c -o Cholesky/cholmod_rcond.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_rcond.c -o Cholesky/cholmod_l_rcond.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_resymbol.c -o Cholesky/cholmod_resymbol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_resymbol.c -o Cholesky/cholmod_l_resymbol.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_rowcolcounts.c -o Cholesky/cholmod_rowcolcounts.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_rowcolcounts.c -o Cholesky/cholmod_l_rowcolcounts.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_rowfac.c -o Cholesky/cholmod_rowfac.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_rowfac.c -o Cholesky/cholmod_l_rowfac.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_solve.c -o Cholesky/cholmod_solve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_solve.c -o Cholesky/cholmod_l_solve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_spsolve.c -o Cholesky/cholmod_spsolve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Cholesky/cholmod_l_spsolve.c -o Cholesky/cholmod_l_spsolve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_aat.c -o Utility/cholmod_aat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_aat.c -o Utility/cholmod_l_aat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_add.c -o Utility/cholmod_add.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_add.c -o Utility/cholmod_l_add.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_add_size_t.c -o Utility/cholmod_add_size_t.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_add_size_t.c -o Utility/cholmod_l_add_size_t.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_alloc_factor.c -o Utility/cholmod_alloc_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_alloc_factor.c -o Utility/cholmod_l_alloc_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_alloc_work.c -o Utility/cholmod_alloc_work.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_alloc_work.c -o Utility/cholmod_l_alloc_work.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_allocate_dense.c -o Utility/cholmod_allocate_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_allocate_dense.c -o Utility/cholmod_l_allocate_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_allocate_factor.c -o Utility/cholmod_allocate_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_allocate_factor.c -o Utility/cholmod_l_allocate_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_allocate_sparse.c -o Utility/cholmod_allocate_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_allocate_sparse.c -o Utility/cholmod_l_allocate_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_allocate_triplet.c -o Utility/cholmod_allocate_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_allocate_triplet.c -o Utility/cholmod_l_allocate_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_allocate_work.c -o Utility/cholmod_allocate_work.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_allocate_work.c -o Utility/cholmod_l_allocate_work.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_band.c -o Utility/cholmod_band.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_band.c -o Utility/cholmod_l_band.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_band_nnz.c -o Utility/cholmod_band_nnz.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_band_nnz.c -o Utility/cholmod_l_band_nnz.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_calloc.c -o Utility/cholmod_calloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_calloc.c -o Utility/cholmod_l_calloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_change_factor.c -o Utility/cholmod_change_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_change_factor.c -o Utility/cholmod_l_change_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_clear_flag.c -o Utility/cholmod_clear_flag.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_clear_flag.c -o Utility/cholmod_l_clear_flag.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_copy.c -o Utility/cholmod_copy.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_copy.c -o Utility/cholmod_l_copy.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_copy_dense.c -o Utility/cholmod_copy_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_copy_dense.c -o Utility/cholmod_l_copy_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_copy_dense2.c -o Utility/cholmod_copy_dense2.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_copy_dense2.c -o Utility/cholmod_l_copy_dense2.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_copy_factor.c -o Utility/cholmod_copy_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_copy_factor.c -o Utility/cholmod_l_copy_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_copy_sparse.c -o Utility/cholmod_copy_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_copy_sparse.c -o Utility/cholmod_l_copy_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_copy_triplet.c -o Utility/cholmod_copy_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_copy_triplet.c -o Utility/cholmod_l_copy_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_cumsum.c -o Utility/cholmod_cumsum.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_cumsum.c -o Utility/cholmod_l_cumsum.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_dbound.c -o Utility/cholmod_dbound.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_dbound.c -o Utility/cholmod_l_dbound.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_defaults.c -o Utility/cholmod_defaults.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_defaults.c -o Utility/cholmod_l_defaults.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_dense_nnz.c -o Utility/cholmod_dense_nnz.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_dense_nnz.c -o Utility/cholmod_l_dense_nnz.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_dense_to_sparse.c -o Utility/cholmod_dense_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_dense_to_sparse.c -o Utility/cholmod_l_dense_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_divcomplex.c -o Utility/cholmod_divcomplex.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_divcomplex.c -o Utility/cholmod_l_divcomplex.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_ensure_dense.c -o Utility/cholmod_ensure_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_ensure_dense.c -o Utility/cholmod_l_ensure_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_error.c -o Utility/cholmod_error.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_error.c -o Utility/cholmod_l_error.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_eye.c -o Utility/cholmod_eye.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_eye.c -o Utility/cholmod_l_eye.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_factor_to_sparse.c -o Utility/cholmod_factor_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_factor_to_sparse.c -o Utility/cholmod_l_factor_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_finish.c -o Utility/cholmod_finish.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_finish.c -o Utility/cholmod_l_finish.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_free.c -o Utility/cholmod_free.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_free.c -o Utility/cholmod_l_free.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_free_dense.c -o Utility/cholmod_free_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_free_dense.c -o Utility/cholmod_l_free_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_free_factor.c -o Utility/cholmod_free_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_free_factor.c -o Utility/cholmod_l_free_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_free_sparse.c -o Utility/cholmod_free_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_free_sparse.c -o Utility/cholmod_l_free_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_free_triplet.c -o Utility/cholmod_free_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_free_triplet.c -o Utility/cholmod_l_free_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_free_work.c -o Utility/cholmod_free_work.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_free_work.c -o Utility/cholmod_l_free_work.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_hypot.c -o Utility/cholmod_hypot.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_hypot.c -o Utility/cholmod_l_hypot.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_malloc.c -o Utility/cholmod_malloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_malloc.c -o Utility/cholmod_l_malloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_maxrank.c -o Utility/cholmod_maxrank.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_maxrank.c -o Utility/cholmod_l_maxrank.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_memdebug.c -o Utility/cholmod_memdebug.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_mult_size_t.c -o Utility/cholmod_mult_size_t.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_mult_size_t.c -o Utility/cholmod_l_mult_size_t.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_mult_uint64_t.c -o Utility/cholmod_mult_uint64_t.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_nnz.c -o Utility/cholmod_nnz.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_nnz.c -o Utility/cholmod_l_nnz.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_ones.c -o Utility/cholmod_ones.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_ones.c -o Utility/cholmod_l_ones.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_pack_factor.c -o Utility/cholmod_pack_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_pack_factor.c -o Utility/cholmod_l_pack_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_ptranspose.c -o Utility/cholmod_ptranspose.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_ptranspose.c -o Utility/cholmod_l_ptranspose.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_realloc.c -o Utility/cholmod_realloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_realloc.c -o Utility/cholmod_l_realloc.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_realloc_multiple.c -o Utility/cholmod_realloc_multiple.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_realloc_multiple.c -o Utility/cholmod_l_realloc_multiple.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_reallocate_column.c -o Utility/cholmod_reallocate_column.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_reallocate_column.c -o Utility/cholmod_l_reallocate_column.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_reallocate_factor.c -o Utility/cholmod_reallocate_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_reallocate_factor.c -o Utility/cholmod_l_reallocate_factor.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_reallocate_sparse.c -o Utility/cholmod_reallocate_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_reallocate_sparse.c -o Utility/cholmod_l_reallocate_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_reallocate_triplet.c -o Utility/cholmod_reallocate_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_reallocate_triplet.c -o Utility/cholmod_l_reallocate_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_sbound.c -o Utility/cholmod_sbound.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_sbound.c -o Utility/cholmod_l_sbound.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_score_comp.c -o Utility/cholmod_score_comp.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_score_comp.c -o Utility/cholmod_l_score_comp.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_set_empty.c -o Utility/cholmod_set_empty.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_set_empty.c -o Utility/cholmod_l_set_empty.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_sort.c -o Utility/cholmod_sort.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_sort.c -o Utility/cholmod_l_sort.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_sparse_to_dense.c -o Utility/cholmod_sparse_to_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_sparse_to_dense.c -o Utility/cholmod_l_sparse_to_dense.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_sparse_to_triplet.c -o Utility/cholmod_sparse_to_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_sparse_to_triplet.c -o Utility/cholmod_l_sparse_to_triplet.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_speye.c -o Utility/cholmod_speye.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_speye.c -o Utility/cholmod_l_speye.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_spzeros.c -o Utility/cholmod_spzeros.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_spzeros.c -o Utility/cholmod_l_spzeros.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_start.c -o Utility/cholmod_start.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_start.c -o Utility/cholmod_l_start.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_transpose.c -o Utility/cholmod_transpose.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_transpose.c -o Utility/cholmod_l_transpose.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_transpose_sym.c -o Utility/cholmod_transpose_sym.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_transpose_sym.c -o Utility/cholmod_l_transpose_sym.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_transpose_unsym.c -o Utility/cholmod_transpose_unsym.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_transpose_unsym.c -o Utility/cholmod_l_transpose_unsym.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_triplet_to_sparse.c -o Utility/cholmod_triplet_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_triplet_to_sparse.c -o Utility/cholmod_l_triplet_to_sparse.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_version.c -o Utility/cholmod_version.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_version.c -o Utility/cholmod_l_version.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_xtype.c -o Utility/cholmod_xtype.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_xtype.c -o Utility/cholmod_l_xtype.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_zeros.c -o Utility/cholmod_zeros.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Utility/cholmod_l_zeros.c -o Utility/cholmod_l_zeros.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_drop.c -o MatrixOps/cholmod_drop.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_l_drop.c -o MatrixOps/cholmod_l_drop.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_horzcat.c -o MatrixOps/cholmod_horzcat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_l_horzcat.c -o MatrixOps/cholmod_l_horzcat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_norm.c -o MatrixOps/cholmod_norm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_l_norm.c -o MatrixOps/cholmod_l_norm.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_scale.c -o MatrixOps/cholmod_scale.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_l_scale.c -o MatrixOps/cholmod_l_scale.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_sdmult.c -o MatrixOps/cholmod_sdmult.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_l_sdmult.c -o MatrixOps/cholmod_l_sdmult.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_ssmult.c -o MatrixOps/cholmod_ssmult.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_l_ssmult.c -o MatrixOps/cholmod_l_ssmult.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_submatrix.c -o MatrixOps/cholmod_submatrix.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_l_submatrix.c -o MatrixOps/cholmod_l_submatrix.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_symmetry.c -o MatrixOps/cholmod_symmetry.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_l_symmetry.c -o MatrixOps/cholmod_l_symmetry.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_vertcat.c -o MatrixOps/cholmod_vertcat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c MatrixOps/cholmod_l_vertcat.c -o MatrixOps/cholmod_l_vertcat.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Modify/cholmod_rowadd.c -o Modify/cholmod_rowadd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Modify/cholmod_l_rowadd.c -o Modify/cholmod_l_rowadd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Modify/cholmod_rowdel.c -o Modify/cholmod_rowdel.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Modify/cholmod_l_rowdel.c -o Modify/cholmod_l_rowdel.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Modify/cholmod_updown.c -o Modify/cholmod_updown.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Modify/cholmod_l_updown.c -o Modify/cholmod_l_updown.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_camd.c -o Partition/cholmod_camd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_l_camd.c -o Partition/cholmod_l_camd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_ccolamd.c -o Partition/cholmod_ccolamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_l_ccolamd.c -o Partition/cholmod_l_ccolamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_csymamd.c -o Partition/cholmod_csymamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_l_csymamd.c -o Partition/cholmod_l_csymamd.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_metis.c -o Partition/cholmod_metis.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_l_metis.c -o Partition/cholmod_l_metis.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_metis_wrapper.c -o Partition/cholmod_metis_wrapper.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_nesdis.c -o Partition/cholmod_nesdis.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Partition/cholmod_l_nesdis.c -o Partition/cholmod_l_nesdis.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Supernodal/cholmod_super_numeric.c -o Supernodal/cholmod_super_numeric.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Supernodal/cholmod_l_super_numeric.c -o Supernodal/cholmod_l_super_numeric.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Supernodal/cholmod_super_solve.c -o Supernodal/cholmod_super_solve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Supernodal/cholmod_l_super_solve.c -o Supernodal/cholmod_l_super_solve.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Supernodal/cholmod_super_symbolic.c -o Supernodal/cholmod_super_symbolic.o gcc -I./Include -I../SuiteSparse_config -I../AMD/Include -I../COLAMD/Include -I../CAMD/Include -I../CCOLAMD/Include -I. -I./SuiteSparse_metis/include -I./SuiteSparse_metis/GKlib -I./SuiteSparse_metis/libmetis -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Supernodal/cholmod_l_super_symbolic.c -o Supernodal/cholmod_l_super_symbolic.o rm -f CHOLMOD.a ar -cr CHOLMOD.a Check/cholmod_check.o Check/cholmod_l_check.o Check/cholmod_read.o Check/cholmod_l_read.o Check/cholmod_write.o Check/cholmod_l_write.o Cholesky/cholmod_amd.o Cholesky/cholmod_l_amd.o Cholesky/cholmod_analyze.o Cholesky/cholmod_l_analyze.o Cholesky/cholmod_colamd.o Cholesky/cholmod_l_colamd.o Cholesky/cholmod_etree.o Cholesky/cholmod_l_etree.o Cholesky/cholmod_factorize.o Cholesky/cholmod_l_factorize.o Cholesky/cholmod_postorder.o Cholesky/cholmod_l_postorder.o Cholesky/cholmod_rcond.o Cholesky/cholmod_l_rcond.o Cholesky/cholmod_resymbol.o Cholesky/cholmod_l_resymbol.o Cholesky/cholmod_rowcolcounts.o Cholesky/cholmod_l_rowcolcounts.o Cholesky/cholmod_rowfac.o Cholesky/cholmod_l_rowfac.o Cholesky/cholmod_solve.o Cholesky/cholmod_l_solve.o Cholesky/cholmod_spsolve.o Cholesky/cholmod_l_spsolve.o Utility/cholmod_aat.o Utility/cholmod_l_aat.o Utility/cholmod_add.o Utility/cholmod_l_add.o Utility/cholmod_add_size_t.o Utility/cholmod_l_add_size_t.o Utility/cholmod_alloc_factor.o Utility/cholmod_l_alloc_factor.o Utility/cholmod_alloc_work.o Utility/cholmod_l_alloc_work.o Utility/cholmod_allocate_dense.o Utility/cholmod_l_allocate_dense.o Utility/cholmod_allocate_factor.o Utility/cholmod_l_allocate_factor.o Utility/cholmod_allocate_sparse.o Utility/cholmod_l_allocate_sparse.o Utility/cholmod_allocate_triplet.o Utility/cholmod_l_allocate_triplet.o Utility/cholmod_allocate_work.o Utility/cholmod_l_allocate_work.o Utility/cholmod_band.o Utility/cholmod_l_band.o Utility/cholmod_band_nnz.o Utility/cholmod_l_band_nnz.o Utility/cholmod_calloc.o Utility/cholmod_l_calloc.o Utility/cholmod_change_factor.o Utility/cholmod_l_change_factor.o Utility/cholmod_clear_flag.o Utility/cholmod_l_clear_flag.o Utility/cholmod_copy.o Utility/cholmod_l_copy.o Utility/cholmod_copy_dense.o Utility/cholmod_l_copy_dense.o Utility/cholmod_copy_dense2.o Utility/cholmod_l_copy_dense2.o Utility/cholmod_copy_factor.o Utility/cholmod_l_copy_factor.o Utility/cholmod_copy_sparse.o Utility/cholmod_l_copy_sparse.o Utility/cholmod_copy_triplet.o Utility/cholmod_l_copy_triplet.o Utility/cholmod_cumsum.o Utility/cholmod_l_cumsum.o Utility/cholmod_dbound.o Utility/cholmod_l_dbound.o Utility/cholmod_defaults.o Utility/cholmod_l_defaults.o Utility/cholmod_dense_nnz.o Utility/cholmod_l_dense_nnz.o Utility/cholmod_dense_to_sparse.o Utility/cholmod_l_dense_to_sparse.o Utility/cholmod_divcomplex.o Utility/cholmod_l_divcomplex.o Utility/cholmod_ensure_dense.o Utility/cholmod_l_ensure_dense.o Utility/cholmod_error.o Utility/cholmod_l_error.o Utility/cholmod_eye.o Utility/cholmod_l_eye.o Utility/cholmod_factor_to_sparse.o Utility/cholmod_l_factor_to_sparse.o Utility/cholmod_finish.o Utility/cholmod_l_finish.o Utility/cholmod_free.o Utility/cholmod_l_free.o Utility/cholmod_free_dense.o Utility/cholmod_l_free_dense.o Utility/cholmod_free_factor.o Utility/cholmod_l_free_factor.o Utility/cholmod_free_sparse.o Utility/cholmod_l_free_sparse.o Utility/cholmod_free_triplet.o Utility/cholmod_l_free_triplet.o Utility/cholmod_free_work.o Utility/cholmod_l_free_work.o Utility/cholmod_hypot.o Utility/cholmod_l_hypot.o Utility/cholmod_malloc.o Utility/cholmod_l_malloc.o Utility/cholmod_maxrank.o Utility/cholmod_l_maxrank.o Utility/cholmod_memdebug.o Utility/cholmod_mult_size_t.o Utility/cholmod_l_mult_size_t.o Utility/cholmod_mult_uint64_t.o Utility/cholmod_nnz.o Utility/cholmod_l_nnz.o Utility/cholmod_ones.o Utility/cholmod_l_ones.o Utility/cholmod_pack_factor.o Utility/cholmod_l_pack_factor.o Utility/cholmod_ptranspose.o Utility/cholmod_l_ptranspose.o Utility/cholmod_realloc.o Utility/cholmod_l_realloc.o Utility/cholmod_realloc_multiple.o Utility/cholmod_l_realloc_multiple.o Utility/cholmod_reallocate_column.o Utility/cholmod_l_reallocate_column.o Utility/cholmod_reallocate_factor.o Utility/cholmod_l_reallocate_factor.o Utility/cholmod_reallocate_sparse.o Utility/cholmod_l_reallocate_sparse.o Utility/cholmod_reallocate_triplet.o Utility/cholmod_l_reallocate_triplet.o Utility/cholmod_sbound.o Utility/cholmod_l_sbound.o Utility/cholmod_score_comp.o Utility/cholmod_l_score_comp.o Utility/cholmod_set_empty.o Utility/cholmod_l_set_empty.o Utility/cholmod_sort.o Utility/cholmod_l_sort.o Utility/cholmod_sparse_to_dense.o Utility/cholmod_l_sparse_to_dense.o Utility/cholmod_sparse_to_triplet.o Utility/cholmod_l_sparse_to_triplet.o Utility/cholmod_speye.o Utility/cholmod_l_speye.o Utility/cholmod_spzeros.o Utility/cholmod_l_spzeros.o Utility/cholmod_start.o Utility/cholmod_l_start.o Utility/cholmod_transpose.o Utility/cholmod_l_transpose.o Utility/cholmod_transpose_sym.o Utility/cholmod_l_transpose_sym.o Utility/cholmod_transpose_unsym.o Utility/cholmod_l_transpose_unsym.o Utility/cholmod_triplet_to_sparse.o Utility/cholmod_l_triplet_to_sparse.o Utility/cholmod_version.o Utility/cholmod_l_version.o Utility/cholmod_xtype.o Utility/cholmod_l_xtype.o Utility/cholmod_zeros.o Utility/cholmod_l_zeros.o MatrixOps/cholmod_drop.o MatrixOps/cholmod_l_drop.o MatrixOps/cholmod_horzcat.o MatrixOps/cholmod_l_horzcat.o MatrixOps/cholmod_norm.o MatrixOps/cholmod_l_norm.o MatrixOps/cholmod_scale.o MatrixOps/cholmod_l_scale.o MatrixOps/cholmod_sdmult.o MatrixOps/cholmod_l_sdmult.o MatrixOps/cholmod_ssmult.o MatrixOps/cholmod_l_ssmult.o MatrixOps/cholmod_submatrix.o MatrixOps/cholmod_l_submatrix.o MatrixOps/cholmod_symmetry.o MatrixOps/cholmod_l_symmetry.o MatrixOps/cholmod_vertcat.o MatrixOps/cholmod_l_vertcat.o Modify/cholmod_rowadd.o Modify/cholmod_l_rowadd.o Modify/cholmod_rowdel.o Modify/cholmod_l_rowdel.o Modify/cholmod_updown.o Modify/cholmod_l_updown.o Partition/cholmod_camd.o Partition/cholmod_l_camd.o Partition/cholmod_ccolamd.o Partition/cholmod_l_ccolamd.o Partition/cholmod_csymamd.o Partition/cholmod_l_csymamd.o Partition/cholmod_metis.o Partition/cholmod_l_metis.o Partition/cholmod_metis_wrapper.o Partition/cholmod_nesdis.o Partition/cholmod_l_nesdis.o Supernodal/cholmod_super_numeric.o Supernodal/cholmod_l_super_numeric.o Supernodal/cholmod_super_solve.o Supernodal/cholmod_l_super_solve.o Supernodal/cholmod_super_symbolic.o Supernodal/cholmod_l_super_symbolic.o ranlib CHOLMOD.a make[4]: Leaving directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/CHOLMOD' cd SuiteSparse/CCOLAMD && make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" make[4]: Entering directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/CCOLAMD' gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/ccolamd.c -o Source/ccolamd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/ccolamd_l.c -o Source/ccolamd_l.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/ccolamd_version.c -o Source/ccolamd_version.o rm -f CCOLAMD.a ar -cr CCOLAMD.a Source/ccolamd.o Source/ccolamd_l.o Source/ccolamd_version.o ranlib CCOLAMD.a make[4]: Leaving directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/CCOLAMD' cd SuiteSparse/CAMD && make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" make[4]: Entering directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/CAMD' gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_1.c -o Source/camd_1.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l1.c -o Source/camd_l1.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_2.c -o Source/camd_2.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l2.c -o Source/camd_l2.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_aat.c -o Source/camd_aat.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l_aat.c -o Source/camd_l_aat.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_control.c -o Source/camd_control.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l_control.c -o Source/camd_l_control.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_defaults.c -o Source/camd_defaults.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l_defaults.c -o Source/camd_l_defaults.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_dump.c -o Source/camd_dump.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l_dump.c -o Source/camd_l_dump.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_info.c -o Source/camd_info.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l_info.c -o Source/camd_l_info.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_order.c -o Source/camd_order.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l_order.c -o Source/camd_l_order.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_postorder.c -o Source/camd_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l_postorder.c -o Source/camd_l_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_preprocess.c -o Source/camd_preprocess.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l_preprocess.c -o Source/camd_l_preprocess.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_valid.c -o Source/camd_valid.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_l_valid.c -o Source/camd_l_valid.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/camd_version.c -o Source/camd_version.o rm -f CAMD.a ar -cr CAMD.a Source/camd_1.o Source/camd_l1.o Source/camd_2.o Source/camd_l2.o Source/camd_aat.o Source/camd_l_aat.o Source/camd_control.o Source/camd_l_control.o Source/camd_defaults.o Source/camd_l_defaults.o Source/camd_dump.o Source/camd_l_dump.o Source/camd_info.o Source/camd_l_info.o Source/camd_order.o Source/camd_l_order.o Source/camd_postorder.o Source/camd_l_postorder.o Source/camd_preprocess.o Source/camd_l_preprocess.o Source/camd_valid.o Source/camd_l_valid.o Source/camd_version.o ranlib CAMD.a make[4]: Leaving directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/CAMD' cd SuiteSparse/COLAMD && make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" make[4]: Entering directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/COLAMD' gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/colamd.c -o Source/colamd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/colamd_l.c -o Source/colamd_l.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/colamd_version.c -o Source/colamd_version.o rm -f COLAMD.a ar -cr COLAMD.a Source/colamd.o Source/colamd_l.o Source/colamd_version.o ranlib COLAMD.a make[4]: Leaving directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/COLAMD' cd SuiteSparse/AMD && make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" make[4]: Entering directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/AMD' gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_1.c -o Source/amd_1.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l1.c -o Source/amd_l1.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_2.c -o Source/amd_2.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l2.c -o Source/amd_l2.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_aat.c -o Source/amd_aat.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_aat.c -o Source/amd_l_aat.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_control.c -o Source/amd_control.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_control.c -o Source/amd_l_control.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_defaults.c -o Source/amd_defaults.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_defaults.c -o Source/amd_l_defaults.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_dump.c -o Source/amd_dump.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_dump.c -o Source/amd_l_dump.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_info.c -o Source/amd_info.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_info.c -o Source/amd_l_info.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_order.c -o Source/amd_order.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_order.c -o Source/amd_l_order.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_post_tree.c -o Source/amd_post_tree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_post_tree.c -o Source/amd_l_post_tree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_postorder.c -o Source/amd_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_postorder.c -o Source/amd_l_postorder.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_preprocess.c -o Source/amd_preprocess.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_preprocess.c -o Source/amd_l_preprocess.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_valid.c -o Source/amd_valid.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_l_valid.c -o Source/amd_l_valid.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/amd_version.c -o Source/amd_version.o rm -f AMD.a ar -cr AMD.a Source/amd_1.o Source/amd_l1.o Source/amd_2.o Source/amd_l2.o Source/amd_aat.o Source/amd_l_aat.o Source/amd_control.o Source/amd_l_control.o Source/amd_defaults.o Source/amd_l_defaults.o Source/amd_dump.o Source/amd_l_dump.o Source/amd_info.o Source/amd_l_info.o Source/amd_order.o Source/amd_l_order.o Source/amd_post_tree.o Source/amd_l_post_tree.o Source/amd_postorder.o Source/amd_l_postorder.o Source/amd_preprocess.o Source/amd_l_preprocess.o Source/amd_valid.o Source/amd_l_valid.o Source/amd_version.o ranlib AMD.a make[4]: Leaving directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/AMD' cd SuiteSparse/CXSparse && make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" make[4]: Entering directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/CXSparse' gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_add.c -o Source/cs_add.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_add.c -o Source/cs_dl_add.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_add.c -o Source/cs_ci_add.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_add.c -o Source/cs_cl_add.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_amd.c -o Source/cs_amd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_amd.c -o Source/cs_dl_amd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_amd.c -o Source/cs_ci_amd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_amd.c -o Source/cs_cl_amd.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_chol.c -o Source/cs_chol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_chol.c -o Source/cs_dl_chol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_chol.c -o Source/cs_ci_chol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_chol.c -o Source/cs_cl_chol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cholsol.c -o Source/cs_cholsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_cholsol.c -o Source/cs_dl_cholsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_cholsol.c -o Source/cs_ci_cholsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_cholsol.c -o Source/cs_cl_cholsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_compress.c -o Source/cs_compress.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_compress.c -o Source/cs_dl_compress.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_compress.c -o Source/cs_ci_compress.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_compress.c -o Source/cs_cl_compress.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_convert.c -o Source/cs_convert.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_counts.c -o Source/cs_counts.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_counts.c -o Source/cs_dl_counts.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_counts.c -o Source/cs_ci_counts.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_counts.c -o Source/cs_cl_counts.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cumsum.c -o Source/cs_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_cumsum.c -o Source/cs_dl_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_cumsum.c -o Source/cs_ci_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_cumsum.c -o Source/cs_cl_cumsum.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dfs.c -o Source/cs_dfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_dfs.c -o Source/cs_dl_dfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_dfs.c -o Source/cs_ci_dfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_dfs.c -o Source/cs_cl_dfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dmperm.c -o Source/cs_dmperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_dmperm.c -o Source/cs_dl_dmperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_dmperm.c -o Source/cs_ci_dmperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_dmperm.c -o Source/cs_cl_dmperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_droptol.c -o Source/cs_droptol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_droptol.c -o Source/cs_dl_droptol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_droptol.c -o Source/cs_ci_droptol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_droptol.c -o Source/cs_cl_droptol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dropzeros.c -o Source/cs_dropzeros.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_dropzeros.c -o Source/cs_dl_dropzeros.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_dropzeros.c -o Source/cs_ci_dropzeros.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_dropzeros.c -o Source/cs_cl_dropzeros.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dupl.c -o Source/cs_dupl.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_dupl.c -o Source/cs_dl_dupl.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_dupl.c -o Source/cs_ci_dupl.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_dupl.c -o Source/cs_cl_dupl.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_entry.c -o Source/cs_entry.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_entry.c -o Source/cs_dl_entry.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_entry.c -o Source/cs_ci_entry.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_entry.c -o Source/cs_cl_entry.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ereach.c -o Source/cs_ereach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_ereach.c -o Source/cs_dl_ereach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_ereach.c -o Source/cs_ci_ereach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_ereach.c -o Source/cs_cl_ereach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_etree.c -o Source/cs_etree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_etree.c -o Source/cs_dl_etree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_etree.c -o Source/cs_ci_etree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_etree.c -o Source/cs_cl_etree.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_fkeep.c -o Source/cs_fkeep.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_fkeep.c -o Source/cs_dl_fkeep.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_fkeep.c -o Source/cs_ci_fkeep.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_fkeep.c -o Source/cs_cl_fkeep.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_gaxpy.c -o Source/cs_gaxpy.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_gaxpy.c -o Source/cs_dl_gaxpy.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_gaxpy.c -o Source/cs_ci_gaxpy.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_gaxpy.c -o Source/cs_cl_gaxpy.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_happly.c -o Source/cs_happly.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_happly.c -o Source/cs_dl_happly.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_happly.c -o Source/cs_ci_happly.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_happly.c -o Source/cs_cl_happly.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_house.c -o Source/cs_house.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_house.c -o Source/cs_dl_house.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_house.c -o Source/cs_ci_house.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_house.c -o Source/cs_cl_house.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ipvec.c -o Source/cs_ipvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_ipvec.c -o Source/cs_dl_ipvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_ipvec.c -o Source/cs_ci_ipvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_ipvec.c -o Source/cs_cl_ipvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_leaf.c -o Source/cs_leaf.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_leaf.c -o Source/cs_dl_leaf.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_leaf.c -o Source/cs_ci_leaf.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_leaf.c -o Source/cs_cl_leaf.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_load.c -o Source/cs_load.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_load.c -o Source/cs_dl_load.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_load.c -o Source/cs_ci_load.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_load.c -o Source/cs_cl_load.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_lsolve.c -o Source/cs_lsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_lsolve.c -o Source/cs_dl_lsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_lsolve.c -o Source/cs_ci_lsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_lsolve.c -o Source/cs_cl_lsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ltsolve.c -o Source/cs_ltsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_ltsolve.c -o Source/cs_dl_ltsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_ltsolve.c -o Source/cs_ci_ltsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_ltsolve.c -o Source/cs_cl_ltsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_lu.c -o Source/cs_lu.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_lu.c -o Source/cs_dl_lu.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_lu.c -o Source/cs_ci_lu.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_lu.c -o Source/cs_cl_lu.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_lusol.c -o Source/cs_lusol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_lusol.c -o Source/cs_dl_lusol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_lusol.c -o Source/cs_ci_lusol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_lusol.c -o Source/cs_cl_lusol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_malloc.c -o Source/cs_malloc.o Source/cs_malloc.c: In function ‘cs_di_realloc’: Source/cs_malloc.c:37:26: warning: pointer ‘p’ may be used after ‘realloc’ [-Wuse-after-free] 37 | return ((*ok) ? pnew : p) ; /* return original p if failure */ | ~~~~~~~~~~~~~~^~~~ Source/cs_malloc.c:35:12: note: call to ‘realloc’ here 35 | pnew = realloc (p, CS_MAX (n,1) * size) ; /* realloc the block */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_malloc.c -o Source/cs_dl_malloc.o In file included from Source/cs_dl_malloc.c:9: Source/cs_malloc.c: In function ‘cs_dl_realloc’: Source/cs_malloc.c:37:26: warning: pointer ‘p’ may be used after ‘realloc’ [-Wuse-after-free] 37 | return ((*ok) ? pnew : p) ; /* return original p if failure */ | ~~~~~~~~~~~~~~^~~~ Source/cs_malloc.c:35:12: note: call to ‘realloc’ here 35 | pnew = realloc (p, CS_MAX (n,1) * size) ; /* realloc the block */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_malloc.c -o Source/cs_ci_malloc.o In file included from Source/cs_ci_malloc.c:9: Source/cs_malloc.c: In function ‘cs_ci_realloc’: Source/cs_malloc.c:37:26: warning: pointer ‘p’ may be used after ‘realloc’ [-Wuse-after-free] 37 | return ((*ok) ? pnew : p) ; /* return original p if failure */ | ~~~~~~~~~~~~~~^~~~ Source/cs_malloc.c:35:12: note: call to ‘realloc’ here 35 | pnew = realloc (p, CS_MAX (n,1) * size) ; /* realloc the block */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_malloc.c -o Source/cs_cl_malloc.o In file included from Source/cs_cl_malloc.c:10: Source/cs_malloc.c: In function ‘cs_cl_realloc’: Source/cs_malloc.c:37:26: warning: pointer ‘p’ may be used after ‘realloc’ [-Wuse-after-free] 37 | return ((*ok) ? pnew : p) ; /* return original p if failure */ | ~~~~~~~~~~~~~~^~~~ Source/cs_malloc.c:35:12: note: call to ‘realloc’ here 35 | pnew = realloc (p, CS_MAX (n,1) * size) ; /* realloc the block */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_maxtrans.c -o Source/cs_maxtrans.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_maxtrans.c -o Source/cs_dl_maxtrans.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_maxtrans.c -o Source/cs_ci_maxtrans.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_maxtrans.c -o Source/cs_cl_maxtrans.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_multiply.c -o Source/cs_multiply.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_multiply.c -o Source/cs_dl_multiply.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_multiply.c -o Source/cs_ci_multiply.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_multiply.c -o Source/cs_cl_multiply.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_norm.c -o Source/cs_norm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_norm.c -o Source/cs_dl_norm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_norm.c -o Source/cs_ci_norm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_norm.c -o Source/cs_cl_norm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_permute.c -o Source/cs_permute.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_permute.c -o Source/cs_dl_permute.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_permute.c -o Source/cs_ci_permute.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_permute.c -o Source/cs_cl_permute.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_pinv.c -o Source/cs_pinv.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_pinv.c -o Source/cs_dl_pinv.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_pinv.c -o Source/cs_ci_pinv.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_pinv.c -o Source/cs_cl_pinv.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_post.c -o Source/cs_post.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_post.c -o Source/cs_dl_post.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_post.c -o Source/cs_ci_post.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_post.c -o Source/cs_cl_post.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_print.c -o Source/cs_print.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_print.c -o Source/cs_dl_print.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_print.c -o Source/cs_ci_print.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_print.c -o Source/cs_cl_print.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_pvec.c -o Source/cs_pvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_pvec.c -o Source/cs_dl_pvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_pvec.c -o Source/cs_ci_pvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_pvec.c -o Source/cs_cl_pvec.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_qr.c -o Source/cs_qr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_qr.c -o Source/cs_dl_qr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_qr.c -o Source/cs_ci_qr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_qr.c -o Source/cs_cl_qr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_qrsol.c -o Source/cs_qrsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_qrsol.c -o Source/cs_dl_qrsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_qrsol.c -o Source/cs_ci_qrsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_qrsol.c -o Source/cs_cl_qrsol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_randperm.c -o Source/cs_randperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_randperm.c -o Source/cs_dl_randperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_randperm.c -o Source/cs_ci_randperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_randperm.c -o Source/cs_cl_randperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_reach.c -o Source/cs_reach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_reach.c -o Source/cs_dl_reach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_reach.c -o Source/cs_ci_reach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_reach.c -o Source/cs_cl_reach.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_scatter.c -o Source/cs_scatter.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_scatter.c -o Source/cs_dl_scatter.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_scatter.c -o Source/cs_ci_scatter.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_scatter.c -o Source/cs_cl_scatter.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_scc.c -o Source/cs_scc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_scc.c -o Source/cs_dl_scc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_scc.c -o Source/cs_ci_scc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_scc.c -o Source/cs_cl_scc.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_schol.c -o Source/cs_schol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_schol.c -o Source/cs_dl_schol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_schol.c -o Source/cs_ci_schol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_schol.c -o Source/cs_cl_schol.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_spsolve.c -o Source/cs_spsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_spsolve.c -o Source/cs_dl_spsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_spsolve.c -o Source/cs_ci_spsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_spsolve.c -o Source/cs_cl_spsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_sqr.c -o Source/cs_sqr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_sqr.c -o Source/cs_dl_sqr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_sqr.c -o Source/cs_ci_sqr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_sqr.c -o Source/cs_cl_sqr.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_symperm.c -o Source/cs_symperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_symperm.c -o Source/cs_dl_symperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_symperm.c -o Source/cs_ci_symperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_symperm.c -o Source/cs_cl_symperm.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_tdfs.c -o Source/cs_tdfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_tdfs.c -o Source/cs_dl_tdfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_tdfs.c -o Source/cs_ci_tdfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_tdfs.c -o Source/cs_cl_tdfs.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_transpose.c -o Source/cs_transpose.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_transpose.c -o Source/cs_dl_transpose.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_transpose.c -o Source/cs_ci_transpose.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_transpose.c -o Source/cs_cl_transpose.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_updown.c -o Source/cs_updown.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_updown.c -o Source/cs_dl_updown.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_updown.c -o Source/cs_ci_updown.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_updown.c -o Source/cs_cl_updown.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_usolve.c -o Source/cs_usolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_usolve.c -o Source/cs_dl_usolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_usolve.c -o Source/cs_ci_usolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_usolve.c -o Source/cs_cl_usolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_util.c -o Source/cs_util.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_util.c -o Source/cs_dl_util.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_util.c -o Source/cs_ci_util.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_util.c -o Source/cs_cl_util.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_utsolve.c -o Source/cs_utsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_dl_utsolve.c -o Source/cs_dl_utsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_ci_utsolve.c -o Source/cs_ci_utsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cs_cl_utsolve.c -o Source/cs_cl_utsolve.o gcc -I./Include -I../SuiteSparse_config -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c Source/cxsparse_version.c -o Source/cxsparse_version.o rm -f CXSparse.a ar -cr CXSparse.a Source/cs_add.o Source/cs_dl_add.o Source/cs_ci_add.o Source/cs_cl_add.o Source/cs_amd.o Source/cs_dl_amd.o Source/cs_ci_amd.o Source/cs_cl_amd.o Source/cs_chol.o Source/cs_dl_chol.o Source/cs_ci_chol.o Source/cs_cl_chol.o Source/cs_cholsol.o Source/cs_dl_cholsol.o Source/cs_ci_cholsol.o Source/cs_cl_cholsol.o Source/cs_compress.o Source/cs_dl_compress.o Source/cs_ci_compress.o Source/cs_cl_compress.o Source/cs_convert.o Source/cs_counts.o Source/cs_dl_counts.o Source/cs_ci_counts.o Source/cs_cl_counts.o Source/cs_cumsum.o Source/cs_dl_cumsum.o Source/cs_ci_cumsum.o Source/cs_cl_cumsum.o Source/cs_dfs.o Source/cs_dl_dfs.o Source/cs_ci_dfs.o Source/cs_cl_dfs.o Source/cs_dmperm.o Source/cs_dl_dmperm.o Source/cs_ci_dmperm.o Source/cs_cl_dmperm.o Source/cs_droptol.o Source/cs_dl_droptol.o Source/cs_ci_droptol.o Source/cs_cl_droptol.o Source/cs_dropzeros.o Source/cs_dl_dropzeros.o Source/cs_ci_dropzeros.o Source/cs_cl_dropzeros.o Source/cs_dupl.o Source/cs_dl_dupl.o Source/cs_ci_dupl.o Source/cs_cl_dupl.o Source/cs_entry.o Source/cs_dl_entry.o Source/cs_ci_entry.o Source/cs_cl_entry.o Source/cs_ereach.o Source/cs_dl_ereach.o Source/cs_ci_ereach.o Source/cs_cl_ereach.o Source/cs_etree.o Source/cs_dl_etree.o Source/cs_ci_etree.o Source/cs_cl_etree.o Source/cs_fkeep.o Source/cs_dl_fkeep.o Source/cs_ci_fkeep.o Source/cs_cl_fkeep.o Source/cs_gaxpy.o Source/cs_dl_gaxpy.o Source/cs_ci_gaxpy.o Source/cs_cl_gaxpy.o Source/cs_happly.o Source/cs_dl_happly.o Source/cs_ci_happly.o Source/cs_cl_happly.o Source/cs_house.o Source/cs_dl_house.o Source/cs_ci_house.o Source/cs_cl_house.o Source/cs_ipvec.o Source/cs_dl_ipvec.o Source/cs_ci_ipvec.o Source/cs_cl_ipvec.o Source/cs_leaf.o Source/cs_dl_leaf.o Source/cs_ci_leaf.o Source/cs_cl_leaf.o Source/cs_load.o Source/cs_dl_load.o Source/cs_ci_load.o Source/cs_cl_load.o Source/cs_lsolve.o Source/cs_dl_lsolve.o Source/cs_ci_lsolve.o Source/cs_cl_lsolve.o Source/cs_ltsolve.o Source/cs_dl_ltsolve.o Source/cs_ci_ltsolve.o Source/cs_cl_ltsolve.o Source/cs_lu.o Source/cs_dl_lu.o Source/cs_ci_lu.o Source/cs_cl_lu.o Source/cs_lusol.o Source/cs_dl_lusol.o Source/cs_ci_lusol.o Source/cs_cl_lusol.o Source/cs_malloc.o Source/cs_dl_malloc.o Source/cs_ci_malloc.o Source/cs_cl_malloc.o Source/cs_maxtrans.o Source/cs_dl_maxtrans.o Source/cs_ci_maxtrans.o Source/cs_cl_maxtrans.o Source/cs_multiply.o Source/cs_dl_multiply.o Source/cs_ci_multiply.o Source/cs_cl_multiply.o Source/cs_norm.o Source/cs_dl_norm.o Source/cs_ci_norm.o Source/cs_cl_norm.o Source/cs_permute.o Source/cs_dl_permute.o Source/cs_ci_permute.o Source/cs_cl_permute.o Source/cs_pinv.o Source/cs_dl_pinv.o Source/cs_ci_pinv.o Source/cs_cl_pinv.o Source/cs_post.o Source/cs_dl_post.o Source/cs_ci_post.o Source/cs_cl_post.o Source/cs_print.o Source/cs_dl_print.o Source/cs_ci_print.o Source/cs_cl_print.o Source/cs_pvec.o Source/cs_dl_pvec.o Source/cs_ci_pvec.o Source/cs_cl_pvec.o Source/cs_qr.o Source/cs_dl_qr.o Source/cs_ci_qr.o Source/cs_cl_qr.o Source/cs_qrsol.o Source/cs_dl_qrsol.o Source/cs_ci_qrsol.o Source/cs_cl_qrsol.o Source/cs_randperm.o Source/cs_dl_randperm.o Source/cs_ci_randperm.o Source/cs_cl_randperm.o Source/cs_reach.o Source/cs_dl_reach.o Source/cs_ci_reach.o Source/cs_cl_reach.o Source/cs_scatter.o Source/cs_dl_scatter.o Source/cs_ci_scatter.o Source/cs_cl_scatter.o Source/cs_scc.o Source/cs_dl_scc.o Source/cs_ci_scc.o Source/cs_cl_scc.o Source/cs_schol.o Source/cs_dl_schol.o Source/cs_ci_schol.o Source/cs_cl_schol.o Source/cs_spsolve.o Source/cs_dl_spsolve.o Source/cs_ci_spsolve.o Source/cs_cl_spsolve.o Source/cs_sqr.o Source/cs_dl_sqr.o Source/cs_ci_sqr.o Source/cs_cl_sqr.o Source/cs_symperm.o Source/cs_dl_symperm.o Source/cs_ci_symperm.o Source/cs_cl_symperm.o Source/cs_tdfs.o Source/cs_dl_tdfs.o Source/cs_ci_tdfs.o Source/cs_cl_tdfs.o Source/cs_transpose.o Source/cs_dl_transpose.o Source/cs_ci_transpose.o Source/cs_cl_transpose.o Source/cs_updown.o Source/cs_dl_updown.o Source/cs_ci_updown.o Source/cs_cl_updown.o Source/cs_usolve.o Source/cs_dl_usolve.o Source/cs_ci_usolve.o Source/cs_cl_usolve.o Source/cs_util.o Source/cs_dl_util.o Source/cs_ci_util.o Source/cs_cl_util.o Source/cs_utsolve.o Source/cs_dl_utsolve.o Source/cs_ci_utsolve.o Source/cs_cl_utsolve.o Source/cxsparse_version.o ranlib CXSparse.a make[4]: Leaving directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/CXSparse' cd SuiteSparse/SuiteSparse_config && make clean all CC="gcc" CPPFLAGS="-I/usr/local/include -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -I\"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include\" -DNDEBUG -DNPRINT -DNTIMER" CFLAGS="-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" make[4]: Entering directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/SuiteSparse_config' gcc -I/usr/local/include -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -DNPRINT -DNTIMER -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fpic -fvisibility=hidden -c SuiteSparse_config.c -o SuiteSparse_config.o rm -f SuiteSparse_config.a ar -cr SuiteSparse_config.a SuiteSparse_config.o ranlib SuiteSparse_config.a make[4]: Leaving directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src/SuiteSparse/SuiteSparse_config' gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o Matrix.so Csparse.o attrib.o bind.o cholmod-common.o cholmod-etc.o coerce.o cs-etc.o dense.o determinant.o expm.o factor.o idz.o init.o kappa.o matmult.o objects.o perm.o solve.o sparse.o subassign.o subscript.o utils-R.o utils.o validity.o vector.o SuiteSparse/CHOLMOD/CHOLMOD.a SuiteSparse/CCOLAMD/CCOLAMD.a SuiteSparse/CAMD/CAMD.a SuiteSparse/COLAMD/COLAMD.a SuiteSparse/AMD/AMD.a SuiteSparse/CXSparse/CXSparse.a SuiteSparse/SuiteSparse_config/SuiteSparse_config.a -lflexiblas -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpqiF0y6/R.INSTALL396b72f49fcb/Matrix/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/Matrix/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘chol2inv’ from ‘base’ in package ‘Matrix’ (from the saved implicit definition) Creating a generic function for ‘chol2inv’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘diag’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘zapsmall’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘drop’ from package ‘base’ in package ‘Matrix’ in method for ‘coerce’ with signature ‘"matrix.csc","dgCMatrix"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.csr","dgRMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.coo","dgTMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.csr","dgCMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.coo","dgCMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.csc","CsparseMatrix"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.csc","RsparseMatrix"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.csc","TsparseMatrix"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.csr","CsparseMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.csr","RsparseMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.csr","TsparseMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.coo","CsparseMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.coo","RsparseMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.coo","TsparseMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.csc","sparseMatrix"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.csr","sparseMatrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.coo","sparseMatrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"matrix.csc","Matrix"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"matrix.csr","Matrix"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"matrix.coo","Matrix"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"dgCMatrix","matrix.csc"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"dgRMatrix","matrix.csr"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"dgTMatrix","matrix.coo"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"Matrix","matrix.csc"’: no definition for class “matrix.csc” in method for ‘coerce’ with signature ‘"Matrix","matrix.csr"’: no definition for class “matrix.csr” in method for ‘coerce’ with signature ‘"Matrix","matrix.coo"’: no definition for class “matrix.coo” in method for ‘coerce’ with signature ‘"graphAM","TsparseMatrix"’: no definition for class “graphAM” in method for ‘coerce’ with signature ‘"graphNEL","TsparseMatrix"’: no definition for class “graphNEL” in method for ‘coerce’ with signature ‘"graph","CsparseMatrix"’: no definition for class “graph” in method for ‘coerce’ with signature ‘"graph","RsparseMatrix"’: no definition for class “graph” in method for ‘coerce’ with signature ‘"graph","TsparseMatrix"’: no definition for class “graph” in method for ‘coerce’ with signature ‘"graph","sparseMatrix"’: no definition for class “graph” in method for ‘coerce’ with signature ‘"graph","Matrix"’: no definition for class “graph” in method for ‘coerce’ with signature ‘"TsparseMatrix","graphNEL"’: no definition for class “graphNEL” in method for ‘coerce’ with signature ‘"Matrix","graphNEL"’: no definition for class “graphNEL” in method for ‘coerce’ with signature ‘"Matrix","graph"’: no definition for class “graph” Creating a generic function for ‘colSums’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘colMeans’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘rowSums’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘rowMeans’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘diag<-’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘unname’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘norm’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘rcond’ from ‘base’ in package ‘Matrix’ (from the saved implicit definition) Creating a generic function for ‘rcond’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘cov2cor’ from package ‘stats’ in package ‘Matrix’ Creating a generic function for ‘qr.Q’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.R’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.X’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.coef’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.fitted’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.resid’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.qty’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘qr.qy’ from package ‘base’ in package ‘Matrix’ Creating a generic function for ‘toeplitz’ from ‘stats’ in package ‘Matrix’ (from the saved implicit definition) Creating a generic function for ‘toeplitz’ from package ‘stats’ in package ‘Matrix’ Creating a generic function for ‘which’ from package ‘base’ in package ‘Matrix’ ** help *** installing help indices converting help for package ‘Matrix’ finding HTML links ... done BunchKaufman-class html BunchKaufman-methods html CAex html CHMfactor-class html Cholesky-class html Cholesky-methods html CsparseMatrix-class html Diagonal html Hilbert html KNex html KhatriRao html Matrix-class html Matrix-defunct html Matrix-deprecated html Matrix-notyet html Matrix html MatrixClass html MatrixFactorization-class html RsparseMatrix-class html Schur-class html Schur-methods html TsparseMatrix-class html USCounties html abIndex-class html abIseq html all.equal-methods html asUniqueT html band-methods html bandSparse html bdiag html boolmatmult-methods html cbind2-methods html chol-methods html chol2inv-methods html coerce-methods-SparseM html coerce-methods-graph html colSums-methods html condest html dMatrix-class html ddenseMatrix-class html ddiMatrix-class html denseLU-class html denseMatrix-class html dgCMatrix-class html dgRMatrix-class html dgTMatrix-class html dgeMatrix-class html diagU2N html diagonalMatrix-class html dimScale html dmperm html dpoMatrix-class html drop0 html dsCMatrix-class html dsRMatrix-class html dsparseMatrix-class html dsyMatrix-class html dtCMatrix-class html dtRMatrix-class-sparse html dtpMatrix-class html dtrMatrix-class-dense html expand-methods html expm-methods html externalFormats html facmul-methods html fastMisc html forceSymmetric-methods html formatSparseM html generalMatrix-class html image-methods html indMatrix-class html index-class html invertPerm html is.na-methods html is.null.DN html isSymmetric-methods html isTriangular-methods html kronecker-methods html ldenseMatrix-class html ldiMatrix-class html lgeMatrix-class html lsparseMatrix-class html lsyMatrix-class html ltrMatrix-class html lu-methods html mat2triplet html matmult-methods html nMatrix-class html ndenseMatrix-class html nearPD html ngeMatrix-class html nnzero-methods html norm-methods html nsparseMatrix-class html nsyMatrix-class html ntrMatrix-class html pMatrix-class html pack-methods html packedMatrix-class html printSpMatrix html qr-methods html rankMatrix html rcond-methods html rep2abI html rleDiff-class html rsparsematrix html solve-methods html spMatrix html sparse.model.matrix html sparseLU-class html sparseMatrix-class html sparseMatrix html sparseQR-class html sparseVector-class html sparseVector html subassign-methods html subscript-methods html symmetricMatrix-class html symmpart-methods html triangularMatrix-class html unpackedMatrix-class html updown-methods html wrld_1deg html ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (Matrix) Making 'packages.html' ... done begin installing recommended package nlme * installing *source* package ‘nlme’ ... ** package ‘nlme’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ using Fortran compiler: ‘GNU Fortran (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/Rtmp3UMPOW/R.INSTALL3f8675f2340a/nlme/src' gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c chol.f -o chol.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c corStruct.c -o corStruct.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gnls.c -o gnls.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c matrix.c -o matrix.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c nlOptimizer.c -o nlOptimizer.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c nlme.c -o nlme.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c nlmefit.c -o nlmefit.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pdMat.c -o pdMat.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pythag.c -o pythag.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c rs.f -o rs.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/Rtmp3UMPOW/R.INSTALL3f8675f2340a/nlme/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/nlme/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘nlme’ finding HTML links ... done ACF html ACF.gls html ACF.lme html Alfalfa html Assay html BodyWeight html Cefamandole html Coef html Covariate html Covariate.varFunc html Dialyzer html Dim html Dim.corSpatial html Dim.corStruct html Dim.pdMat html Earthquake html Extract.pdMat html Fatigue html Gasoline html Glucose html Glucose2 html Gun html IGF html Initialize html Initialize.corStruct html Initialize.glsStruct html Initialize.lmeStruct html Initialize.reStruct html Initialize.varFunc html LDEsysMat html Machines html MathAchSchool html MathAchieve html Matrix html Matrix.pdMat html Matrix.reStruct html Meat html Milk html Muscle html Names html Names.formula html Names.pdBlocked html Names.pdMat html Names.reStruct html Nitrendipene html Oats html Orthodont html Ovary html Oxboys html Oxide html PBG html Phenobarb html Pixel html Quinidine html Rail html RatPupWeight html Relaxin html Remifentanil html Soybean html Spruce html Tetracycline1 html Tetracycline2 html VarCorr html Variogram html Variogram.corExp html Variogram.corGaus html Variogram.corLin html Variogram.corRatio html Variogram.corSpatial html Variogram.corSpher html Variogram.default html Variogram.gls html Variogram.lme html Wafer html Wheat html Wheat2 html allCoef html anova.gls html anova.lme html as.matrix.corStruct html as.matrix.pdMat html as.matrix.reStruct html asOneFormula html asTable html augPred html balancedGrouped html bdf html coef.corStruct html coef.gnls html coef.lmList html coef.lme html coef.modelStruct html coef.pdMat html coef.reStruct html coef.varFunc html collapse html collapse.groupedData html compareFits html comparePred html corAR1 html corARMA html corCAR1 html corClasses html corCompSymm html corExp html corFactor html corFactor.corStruct html corGaus html corLin html corMatrix html corMatrix.corStruct html corMatrix.pdMat html corMatrix.reStruct html corNatural html corRatio html corSpatial html corSpher html corSymm html ergoStool html fdHess html fitted.glsStruct html fitted.gnlsStruct html fitted.lmList html fitted.lme html fitted.lmeStruct html fitted.nlmeStruct html fixed.effects html fixef.lmList html formula.pdBlocked html formula.pdMat html formula.reStruct html gapply html getCovariate html getCovariate.corStruct html getCovariate.data.frame html getCovariate.varFunc html getCovariateFormula html getData html getData.gls html getData.lmList html getData.lme html getGroups html getGroups.corStruct html getGroups.data.frame html getGroups.gls html getGroups.lmList html getGroups.lme html getGroups.varFunc html getGroupsFormula html getResponse html getResponseFormula html getVarCov html gls-internal html gls html glsControl html glsObject html glsStruct html gnls html gnlsControl html gnlsObject html gnlsStruct html groupedData html gsummary html intervals html intervals.gls html intervals.lmList html intervals.lme html isBalanced html isInitialized html lmList html lmList.groupedData html lme html lme.groupedData html lme.lmList html lmeControl html lmeObject html lmeStruct html logDet html logDet.corStruct html logDet.pdMat html logDet.reStruct html logLik.corStruct html logLik.glsStruct html logLik.gnls html logLik.gnlsStruct html logLik.lmList html logLik.lme html logLik.lmeStruct html logLik.reStruct html logLik.varFunc html model.matrix.reStruct html needUpdate html needUpdate.modelStruct html nlme-deprecated html nlme html nlme.nlsList html nlmeControl html nlmeObject html nlmeStruct html nlsList html nlsList.selfStart html pairs.compareFits html pairs.lmList html pairs.lme html pdBlocked html pdClasses html pdCompSymm html pdConstruct html pdConstruct.pdBlocked html pdDiag html pdFactor html pdFactor.reStruct html pdIdent html pdLogChol html pdMat html pdMatrix html pdMatrix.reStruct html pdNatural html pdSymm html phenoModel html plot.ACF html plot.Variogram html plot.augPred html plot.compareFits html plot.gls html plot.intervals.lmList html plot.lmList html plot.lme html plot.nffGroupedData html plot.nfnGroupedData html plot.nmGroupedData html plot.ranef.lmList html plot.ranef.lme html pooledSD html predict.gls html predict.gnls html predict.lmList html predict.lme html predict.nlme html print.summary.pdMat html print.varFunc html qqnorm.gls html qqnorm.lme html quinModel html random.effects html ranef.lmList html ranef.lme html reStruct html recalc html recalc.corStruct html recalc.modelStruct html recalc.reStruct html recalc.varFunc html residuals.gls html residuals.glsStruct html residuals.gnlsStruct html residuals.lmList html residuals.lme html residuals.lmeStruct html residuals.nlmeStruct html simulate.lme html solve.pdMat html solve.reStruct html splitFormula html summary.corStruct html summary.gls html summary.lmList html summary.lme html summary.modelStruct html summary.nlsList html summary.pdMat html summary.varFunc html update.modelStruct html update.varFunc html varClasses html varComb html varConstPower html varConstProp html varExp html varFixed html varFunc html varIdent html varPower html varWeights html varWeights.glsStruct html varWeights.lmeStruct html ** building package indices ** testing if installed package can be loaded * DONE (nlme) Making 'packages.html' ... done begin installing recommended package survival * installing *source* package ‘survival’ ... ** package ‘survival’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpXB33Vv/R.INSTALL3fd3550dff74/survival/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agexact.c -o agexact.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agfit4.c -o agfit4.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agfit5.c -o agfit5.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agmart.c -o agmart.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agmart3.c -o agmart3.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agscore2.c -o agscore2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agscore3.c -o agscore3.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agsurv4.c -o agsurv4.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c agsurv5.c -o agsurv5.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cdecomp.c -o cdecomp.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chinv2.c -o chinv2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chinv3.c -o chinv3.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cholesky2.c -o cholesky2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cholesky3.c -o cholesky3.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cholesky5.c -o cholesky5.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chsolve2.c -o chsolve2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chsolve3.c -o chsolve3.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chsolve5.c -o chsolve5.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c collapse.c -o collapse.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c concordance1.c -o concordance1.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c concordance3.c -o concordance3.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c concordance5.c -o concordance5.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cox_Rcallback.c -o cox_Rcallback.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxcount1.c -o coxcount1.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxdetail.c -o coxdetail.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxexact.c -o coxexact.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxfit5.c -o coxfit5.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxfit6.c -o coxfit6.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxmart.c -o coxmart.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxmart2.c -o coxmart2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxph_wtest.c -o coxph_wtest.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxsafe.c -o coxsafe.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxscho.c -o coxscho.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxscore2.c -o coxscore2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxsurv1.c -o coxsurv1.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxsurv2.c -o coxsurv2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxsurv3.c -o coxsurv3.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxsurv4.c -o coxsurv4.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dmatrix.c -o dmatrix.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c doloop.c -o doloop.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fastkm.c -o fastkm.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c finegray.c -o finegray.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gchol.c -o gchol.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c multicheck.c -o multicheck.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c norisk.c -o norisk.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pyears1.c -o pyears1.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pyears2.c -o pyears2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pyears3b.c -o pyears3b.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pystep.c -o pystep.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c residcsum.c -o residcsum.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survConcordance.c -o survConcordance.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survdiff2.c -o survdiff2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survfit4.c -o survfit4.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survfitaj.c -o survfitaj.o survfitaj.c: In function ‘survfitaj’: survfitaj.c:96:14: warning: ‘stdp’ may be used uninitialized [-Wmaybe-uninitialized] 96 | double **stdp, **stdc, **stda; | ^~~~ survfitaj.c:96:23: warning: ‘stdc’ may be used uninitialized [-Wmaybe-uninitialized] 96 | double **stdp, **stdc, **stda; | ^~~~ survfitaj.c:96:31: warning: ‘stda’ may be used uninitialized [-Wmaybe-uninitialized] 96 | double **stdp, **stdc, **stda; | ^~~~ gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survfitkm.c -o survfitkm.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survfitresid.c -o survfitresid.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survpenal.c -o survpenal.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survreg6.c -o survreg6.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survreg7.c -o survreg7.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survregc1.c -o survregc1.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survregc2.c -o survregc2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c survsplit.c -o survsplit.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c tmerge.c -o tmerge.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c twoclust.c -o twoclust.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c zph1.c -o zph1.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c zph2.c -o zph2.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart3.o agscore2.o agscore3.o agsurv4.o agsurv5.o cdecomp.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o collapse.o concordance1.o concordance3.o concordance5.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore2.o coxsurv1.o coxsurv2.o coxsurv3.o coxsurv4.o dmatrix.o doloop.o fastkm.o finegray.o gchol.o init.o multicheck.o norisk.o pyears1.o pyears2.o pyears3b.o pystep.o residcsum.o survConcordance.o survdiff2.o survfit4.o survfitaj.o survfitkm.o survfitresid.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o twoclust.o zph1.o zph2.o -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpXB33Vv/R.INSTALL3fd3550dff74/survival/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘survival’ finding HTML links ... done Surv html Surv2 html Surv2data html Survmethods html aareg html aeqSurv html aggregate.survfit html agreg.fit html aml html anova.coxph html attrassign html basehaz html bladder html blogit html brier html cch html cgd html cgd0 html cipoisson html clogit html cluster html colon html concordance html concordancefit html cox.zph html coxph html coxph.control html coxph.detail html coxph.object html coxph.wtest html coxphms.object html coxsurv.fit html diabetic html dsurvreg html finegray html flchain html frailty html gbsg html heart html hoel html is.ratetable html kidney html levels.Surv html lines.survfit html logLik.coxph html logan html lung html mgus html mgus2 html model.frame.coxph html model.matrix.coxph html myeloid html myeloma html nafld html neardate html nsk html nwtco html ovarian html pbc html pbcseq html plot.aareg html plot.cox.zph html plot.survfit html predict.coxph html predict.survreg html print.aareg html print.summary.coxph html print.summary.survexp html print.summary.survfit html print.survfit html pseudo html pspline html pyears html quantile.survfit html ratetable html ratetableDate html rats html rats2 html reliability html residuals.coxph html residuals.survfit html residuals.survreg html retinopathy html rhDNase html ridge html rotterdam html royston html rttright html solder html stanford2 html statefig html strata html summary.aareg html summary.coxph html summary.pyears html summary.survexp html summary.survfit html survSplit html survcheck html survcondense html survdiff html survexp html survexp.fit html survexp.object html survexp.us html survfit html survfit.coxph html survfit.formula html survfit.matrix html survfit.object html survfit0 html survfitcoxph.fit html survival-deprecated html survival-internal html survobrien html survreg html survreg.control html survreg.distributions html survreg.object html survregDtest html tcut html tmerge html tobin html transplant html udca html untangle.specials html uspop2 html vcov.coxph html veteran html xtfrm.Surv html yates html yates_setup html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (survival) Making 'packages.html' ... done begin installing recommended package boot * installing *source* package ‘boot’ ... ** package ‘boot’ successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘boot’ finding HTML links ... done EEF.profile html Imp.Estimates html abc.ci html acme html aids html aircondit html amis html aml html beaver html bigcity html boot-practicals html boot html boot.array html boot.ci html brambles html breslow html calcium html cane html capability html catsM html cav html cd4 html cd4.nested html censboot html channing html claridge html cloth html co.transfer html coal html control html corr html cum3 html cv.glm html darwin html dogs html downs.bc html ducks html empinf html envelope html exp.tilt html fir html freq.array html frets html glm.diag html glm.diag.plots html gravity html hirose html imp.weights html inv.logit html islay html jack.after.boot html k3.linear html linear.approx html lines.saddle.distn html logit html manaus html melanoma html motor html neuro html nitrofen html nodal html norm.ci html nuclear html paulsen html plot.boot html poisons html polar html print.boot html print.bootci html print.saddle.distn html print.simplex html remission html saddle html saddle.distn html saddle.distn.object html salinity html simplex html simplex.object html smooth.f html sunspot html survival html tau html tilt.boot html tsboot html tuna html urine html var.linear html wool html ** building package indices ** testing if installed package can be loaded * DONE (boot) Making 'packages.html' ... done begin installing recommended package cluster * installing *source* package ‘cluster’ ... ** package ‘cluster’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ using Fortran compiler: ‘GNU Fortran (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/Rtmpf1LCdp/R.INSTALL40e8127ff182/cluster/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c clara.c -o clara.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c daisy.f -o daisy.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dysta.f -o dysta.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fanny.c -o fanny.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mona.c -o mona.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pam.c -o pam.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sildist.c -o sildist.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c spannel.c -o spannel.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c twins.c -o twins.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/Rtmpf1LCdp/R.INSTALL40e8127ff182/cluster/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/cluster/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘cluster’ finding HTML links ... done agnes html agnes.object html agriculture html animals html bannerplot html chorSub html clara html clara.object html clusGap html clusplot.default html clusplot.partition html cluster-internal html coef.hclust html daisy html diana html dissimilarity.object html ellipsoidhull html fanny html fanny.object html flower html lower.to.upper.tri.inds html medoids html mona html mona.object html pam html pam.object html partition.object html plantTraits html plot.agnes html plot.diana html plot.mona html plot.partition html pltree html pluton html predict.ellipsoid html print.agnes html print.clara html print.diana html print.dissimilarity html print.fanny html print.mona html print.pam html ruspini html silhouette html sizeDiss html summary.agnes html summary.clara html summary.diana html summary.mona html summary.pam html twins.object html volume.ellipsoid html votes.repub html xclara html ** building package indices ** testing if installed package can be loaded * DONE (cluster) Making 'packages.html' ... done begin installing recommended package codetools * installing *source* package ‘codetools’ ... ** package ‘codetools’ successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘codetools’ finding HTML links ... done checkUsage html codetools html findGlobals html showTree html ** building package indices ** testing if installed package can be loaded * DONE (codetools) Making 'packages.html' ... done begin installing recommended package foreign * installing *source* package ‘foreign’ ... ** package ‘foreign’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpA7pYeU/R.INSTALL415346d2602e/foreign/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c R_systat.c -o R_systat.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Rdbfread.c -o Rdbfread.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c Rdbfwrite.c -o Rdbfwrite.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c SASxport.c -o SASxport.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c avl.c -o avl.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dbfopen.c -o dbfopen.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c file-handle.c -o file-handle.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c format.c -o format.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c minitab.c -o minitab.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pfm-read.c -o pfm-read.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sfm-read.c -o sfm-read.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c spss.c -o spss.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c stataread.c -o stataread.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpA7pYeU/R.INSTALL415346d2602e/foreign/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘foreign’ finding HTML links ... done lookup.xport html read.S html read.arff html read.dbf html read.dta html read.epiinfo html read.mtp html read.octave html read.spss html read.ssd html read.systat html read.xport html write.arff html write.dbf html write.dta html write.foreign html ** building package indices ** testing if installed package can be loaded * DONE (foreign) Making 'packages.html' ... done begin installing recommended package KernSmooth * installing *source* package ‘KernSmooth’ ... ** package ‘KernSmooth’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ using Fortran compiler: ‘GNU Fortran (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpuOWklL/R.INSTALL41a83dee97f8/KernSmooth/src' gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c blkest.f -o blkest.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c cp.f -o cp.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dgedi.f -o dgedi.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dgefa.f -o dgefa.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c dgesl.f -o dgesl.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c linbin.f -o linbin.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c linbin2D.f -o linbin2D.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c locpoly.f -o locpoly.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c rlbin.f -o rlbin.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c sdiag.f -o sdiag.o gfortran -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules -c sstdiag.f -o sstdiag.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -lflexiblas -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpuOWklL/R.INSTALL41a83dee97f8/KernSmooth/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/KernSmooth/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘KernSmooth’ finding HTML links ... done bkde html bkde2D html bkfe html dpih html dpik html dpill html locpoly html ** building package indices ** testing if installed package can be loaded * DONE (KernSmooth) Making 'packages.html' ... done begin installing recommended package rpart * installing *source* package ‘rpart’ ... ** package ‘rpart’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/Rtmpcd5kKo/R.INSTALL41f84964a1ec/rpart/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c anova.c -o anova.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c anovapred.c -o anovapred.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c branch.c -o branch.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bsplit.c -o bsplit.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c choose_surg.c -o choose_surg.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fix_cp.c -o fix_cp.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c free_tree.c -o free_tree.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gini.c -o gini.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c graycode.c -o graycode.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c insert_split.c -o insert_split.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c make_cp_list.c -o make_cp_list.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c make_cp_table.c -o make_cp_table.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mysort.c -o mysort.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c nodesplit.c -o nodesplit.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c partition.c -o partition.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c poisson.c -o poisson.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pred_rpart.c -o pred_rpart.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c print_tree.c -o print_tree.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rpart.c -o rpart.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rpart_callback.c -o rpart_callback.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rpartexp.c -o rpartexp.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rpartexp2.c -o rpartexp2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rpcountup.c -o rpcountup.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rpmatrix.c -o rpmatrix.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rundown.c -o rundown.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rundown2.c -o rundown2.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c surrogate.c -o surrogate.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c usersplit.c -o usersplit.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c xpred.c -o xpred.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c xval.c -o xval.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/Rtmpcd5kKo/R.INSTALL41f84964a1ec/rpart/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/rpart/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘rpart’ finding HTML links ... done car.test.frame html car90 html cu.summary html kyphosis html labels.rpart html meanvar.rpart html na.rpart html path.rpart html plot.rpart html plotcp html post.rpart html predict.rpart html print.rpart html printcp html prune.rpart html residuals.rpart html rpart-internal html rpart html rpart.control html rpart.exp html rpart.object html rsq.rpart html snip.rpart html solder.balance html stagec html summary.rpart html text.rpart html xpred.rpart html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (rpart) Making 'packages.html' ... done begin installing recommended package class * installing *source* package ‘class’ ... ** package ‘class’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpQDCKf2/R.INSTALL42803243bf85/class/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c class.c -o class.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o class.so class.o -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpQDCKf2/R.INSTALL42803243bf85/class/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/class/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘class’ finding HTML links ... done SOM html batchSOM html condense html knn html knn.cv html knn1 html lvq1 html lvq2 html lvq3 html lvqinit html lvqtest html multiedit html olvq1 html reduce.nn html somgrid html ** building package indices ** testing if installed package can be loaded * DONE (class) Making 'packages.html' ... done begin installing recommended package nnet * installing *source* package ‘nnet’ ... ** package ‘nnet’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpfvFC19/R.INSTALL42ae32ce8d43/nnet/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c nnet.c -o nnet.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o nnet.so nnet.o -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpfvFC19/R.INSTALL42ae32ce8d43/nnet/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘nnet’ finding HTML links ... done class.ind html multinom html nnet.Hess html nnet html predict.nnet html which.is.max html ** building package indices ** testing if installed package can be loaded * DONE (nnet) Making 'packages.html' ... done begin installing recommended package spatial * installing *source* package ‘spatial’ ... ** package ‘spatial’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpPhS9Mx/R.INSTALL42dc330cdfa3/spatial/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c krc.c -o krc.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pps.c -o pps.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o spatial.so init.o krc.o pps.o -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpPhS9Mx/R.INSTALL42dc330cdfa3/spatial/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/spatial/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘spatial’ finding HTML links ... done Kaver html Kenvl html Kfn html Psim html SSI html Strauss html anova.trls html correlogram html expcov html ppgetregion html ppinit html pplik html ppregion html predict.trls html prmat html semat html surf.gls html surf.ls html trls.influence html trmat html variogram html ** building package indices ** testing if installed package can be loaded * DONE (spatial) Making 'packages.html' ... done begin installing recommended package mgcv * installing *source* package ‘mgcv’ ... ** package ‘mgcv’ successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[3]: Entering directory '/tmp/RtmpGoWeBS/R.INSTALL43104a278f5f/mgcv/src' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c coxph.c -o coxph.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c davies.c -o davies.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c discrete.c -o discrete.o discrete.c: In function ‘CXWyd’: discrete.c:700:62: warning: unused variable ‘nrs’ [-Wunused-variable] 700 | int n,*k,*ks,*m,*p,*ts,*dt,*qc,*nthreads,*cs,*rs,nx,nt,ncs,nrs,*ar_stop,*ar_row,*cy; | ^~~ discrete.c:700:49: warning: unused variable ‘rs’ [-Wunused-variable] 700 | int n,*k,*ks,*m,*p,*ts,*dt,*qc,*nthreads,*cs,*rs,nx,nt,ncs,nrs,*ar_stop,*ar_row,*cy; | ^~ discrete.c:700:35: warning: unused variable ‘nthreads’ [-Wunused-variable] 700 | int n,*k,*ks,*m,*p,*ts,*dt,*qc,*nthreads,*cs,*rs,nx,nt,ncs,nrs,*ar_stop,*ar_row,*cy; | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gdi.c -o gdi.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c magic.c -o magic.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mat.c -o mat.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c matrix.c -o matrix.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mgcv.c -o mgcv.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c misc.c -o misc.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mvn.c -o mvn.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ncv.c -o ncv.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qp.c -o qp.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c soap.c -o soap.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sparse-smooth.c -o sparse-smooth.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sparse.c -o sparse.o gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c tprs.c -o tprs.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o mgcv.so coxph.o davies.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o ncv.o qp.o soap.o sparse-smooth.o sparse.o tprs.o -lflexiblas -L -L -lgfortran -lm -fopenmp -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[3]: Leaving directory '/tmp/RtmpGoWeBS/R.INSTALL43104a278f5f/mgcv/src' installing to /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/library/mgcv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘mgcv’ finding HTML links ... done Beta html FFdes html NCV html Predict.matrix html Predict.matrix.cr.smooth html Predict.matrix.soap.film html Rrank html Sl.initial.repara html Sl.repara html Sl.setup html Tweedie html XWXd html anova.gam html bam html bam.update html bandchol html blas.thread.test html bug.reports.mgcv html cSplineDes html chol.down html choose.k html cnorm html columb html concurvity html coxph html coxpht html dDeta html dpnorm html exclude.too.far html extract.lme.cov html factor.smooth html family.mgcv html fix.family.link html fixDependence html formXtViX html formula.gam html fs.test html full.score html gam html gam.check html gam.control html gam.convergence html gam.fit html gam.fit3 html gam.fit5.post.proc html gam.mh html gam.models html gam.outer html gam.reparam html gam.scale html gam.selection html gam.side html gam.vcomp html gam2objective html gamObject html gamSim html gamlss.etamu html gamlss.gH html gamm html gammals html gaulss html get.var html gevlss html gfam html ginla html gumbls html identifiability html in.out html inSide html influence.gam html initial.sp html interpret.gam html jagam html k.check html ldTweedie html ldetS html linear.functional.terms html logLik.gam html ls.size html magic html magic.post.proc html mgcv-FAQ html mgcv-package html mgcv-parallel html mini.roots html missing.data html model.matrix.gam html mono.con html mroot html multinom html mvn html negbin html new.name html notExp html notExp2 html null.space.dimension html ocat html one.se.rule html pcls html pdIdnot html pdTens html pen.edf html place.knots html plot.gam html polys.plot html predict.bam html predict.gam html print.gam html psum.chisq html qq.gam html rTweedie html random.effects html residuals.gam html rig html rmvn html s html scat html sdiag html shash html single.index html slanczos html smooth.construct html smooth.construct.ad.smooth.spec html smooth.construct.bs.smooth.spec html smooth.construct.cr.smooth.spec html smooth.construct.ds.smooth.spec html smooth.construct.fs.smooth.spec html smooth.construct.gp.smooth.spec html smooth.construct.mrf.smooth.spec html smooth.construct.ps.smooth.spec html smooth.construct.re.smooth.spec html smooth.construct.so.smooth.spec html smooth.construct.sos.smooth.spec html smooth.construct.sz.smooth.spec html smooth.construct.t2.smooth.spec html smooth.construct.tensor.smooth.spec html smooth.construct.tp.smooth.spec html smooth.info html smooth.terms html smooth2random html smoothCon html sp.vcov html spasm.construct html step.gam html summary.gam html t2 html te html tensor.prod.model.matrix html totalPenaltySpace html trichol html trind.generator html twlss html uniquecombs html vcov.gam html vis.gam html ziP html ziplss html ** building package indices ** testing if installed package can be loaded * DONE (mgcv) Making 'packages.html' ... done make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/Recommended' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library/Recommended' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' building/updating vignettes for package 'grid' ... building/updating vignettes for package 'parallel' ... building/updating vignettes for package 'utils' ... building/updating vignettes for package 'stats' ... processing 'reshape.Rnw' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2' configuring Java ... Java interpreter : /usr/bin/java Java version : 21.0.2 Java home path : /usr/lib/jvm/jre Java compiler : /usr/bin/javac Java headers gen.: Java archive tool: /usr/bin/jar trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm using C compiler: ‘gcc (GCC) 14.2.1 20241104 (Red Hat 14.2.1-6)’ make[2]: Entering directory '/tmp/Rjavareconf.Zw4X56' gcc -I"/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/include" -DNDEBUG -I/usr/lib/jvm/jre/include -I/usr/lib/jvm/jre/include/linux -I/usr/local/include -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c conftest.c -o conftest.o gcc -shared -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o conftest.so conftest.o -L/usr/lib/jvm/jre/lib/server -ljvm -L/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/lib -lR make[2]: Leaving directory '/tmp/Rjavareconf.Zw4X56' JAVA_HOME : /usr/lib/jvm/jre Java library path: $(JAVA_HOME)/lib/server JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm Updating Java configuration in /builddir/build/BUILD/R-4.4.2-build/R-4.4.2 Done. make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2' + cd src/nmath/standalone + make (cd ../../include; make Rmath.h) make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include' make[1]: 'Rmath.h' is up to date. make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include' Copying source files make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath/standalone' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c making std_unif.d from std_unif.c make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath/standalone' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mlutils.c -o mlutils.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c d1mach.c -o d1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c i1mach.c -o i1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fmax2.c -o fmax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fmin2.c -o fmin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fprec.c -o fprec.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fround.c -o fround.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ftrunc.c -o ftrunc.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sign.c -o sign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fsign.c -o fsign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c imax2.c -o imax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c imin2.c -o imin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chebyshev.c -o chebyshev.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c log1p.c -o log1p.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lgammacor.c -o lgammacor.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gammalims.c -o gammalims.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c stirlerr.c -o stirlerr.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bd0.c -o bd0.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gamma.c -o gamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lgamma.c -o lgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c beta.c -o beta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lbeta.c -o lbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c polygamma.c -o polygamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cospi.c -o cospi.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_i.c -o bessel_i.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_j.c -o bessel_j.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_k.c -o bessel_k.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_y.c -o bessel_y.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c choose.c -o choose.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c snorm.c -o snorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sexp.c -o sexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dgamma.c -o dgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pgamma.c -o pgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qgamma.c -o qgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rgamma.c -o rgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dbeta.c -o dbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pbeta.c -o pbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qbeta.c -o qbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rbeta.c -o rbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dunif.c -o dunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c punif.c -o punif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qunif.c -o qunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c runif.c -o runif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnorm.c -o dnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnorm.c -o pnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnorm.c -o qnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rnorm.c -o rnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dlnorm.c -o dlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plnorm.c -o plnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qlnorm.c -o qlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlnorm.c -o rlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c df.c -o df.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pf.c -o pf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qf.c -o qf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rf.c -o rf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnf.c -o dnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dt.c -o dt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pt.c -o pt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qt.c -o qt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rt.c -o rt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnt.c -o dnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dchisq.c -o dchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pchisq.c -o pchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qchisq.c -o qchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rchisq.c -o rchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rnchisq.c -o rnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dbinom.c -o dbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pbinom.c -o pbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qbinom.c -o qbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rbinom.c -o rbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rmultinom.c -o rmultinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dcauchy.c -o dcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pcauchy.c -o pcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qcauchy.c -o qcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rcauchy.c -o rcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dexp.c -o dexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pexp.c -o pexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qexp.c -o qexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rexp.c -o rexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dgeom.c -o dgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pgeom.c -o pgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qgeom.c -o qgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rgeom.c -o rgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dhyper.c -o dhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c phyper.c -o phyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qhyper.c -o qhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rhyper.c -o rhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnbinom.c -o dnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnbinom.c -o pnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnbinom.c -o qnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rnbinom.c -o rnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dpois.c -o dpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ppois.c -o ppois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qpois.c -o qpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rpois.c -o rpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dweibull.c -o dweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pweibull.c -o pweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qweibull.c -o qweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rweibull.c -o rweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dlogis.c -o dlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plogis.c -o plogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qlogis.c -o qlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlogis.c -o rlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnchisq.c -o dnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnchisq.c -o pnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnchisq.c -o qnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnbeta.c -o dnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnbeta.c -o pnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnbeta.c -o qnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnf.c -o pnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnt.c -o pnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnf.c -o qnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnt.c -o qnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ptukey.c -o ptukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qtukey.c -o qtukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c toms708.c -o toms708.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c wilcox.c -o wilcox.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c signrank.c -o signrank.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c std_unif.c -o std_unif.o ar -cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o ranlib libRmath.a make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath/standalone' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c mlutils.c -o mlutils.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c d1mach.c -o d1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c i1mach.c -o i1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fmax2.c -o fmax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fmin2.c -o fmin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fprec.c -o fprec.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fround.c -o fround.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ftrunc.c -o ftrunc.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sign.c -o sign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c fsign.c -o fsign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c imax2.c -o imax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c imin2.c -o imin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c chebyshev.c -o chebyshev.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c log1p.c -o log1p.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lgammacor.c -o lgammacor.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gammalims.c -o gammalims.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c stirlerr.c -o stirlerr.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bd0.c -o bd0.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gamma.c -o gamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lgamma.c -o lgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c gamma_cody.c -o gamma_cody.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c beta.c -o beta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c lbeta.c -o lbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c polygamma.c -o polygamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c cospi.c -o cospi.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_i.c -o bessel_i.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_j.c -o bessel_j.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_k.c -o bessel_k.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c bessel_y.c -o bessel_y.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c choose.c -o choose.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c snorm.c -o snorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c sexp.c -o sexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dgamma.c -o dgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pgamma.c -o pgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qgamma.c -o qgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rgamma.c -o rgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dbeta.c -o dbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pbeta.c -o pbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qbeta.c -o qbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rbeta.c -o rbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dunif.c -o dunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c punif.c -o punif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qunif.c -o qunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c runif.c -o runif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnorm.c -o dnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnorm.c -o pnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnorm.c -o qnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rnorm.c -o rnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dlnorm.c -o dlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plnorm.c -o plnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qlnorm.c -o qlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlnorm.c -o rlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c df.c -o df.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pf.c -o pf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qf.c -o qf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rf.c -o rf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnf.c -o dnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dt.c -o dt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pt.c -o pt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qt.c -o qt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rt.c -o rt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnt.c -o dnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dchisq.c -o dchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pchisq.c -o pchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qchisq.c -o qchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rchisq.c -o rchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rnchisq.c -o rnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dbinom.c -o dbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pbinom.c -o pbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qbinom.c -o qbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rbinom.c -o rbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rmultinom.c -o rmultinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dcauchy.c -o dcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pcauchy.c -o pcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qcauchy.c -o qcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rcauchy.c -o rcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dexp.c -o dexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pexp.c -o pexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qexp.c -o qexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rexp.c -o rexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dgeom.c -o dgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pgeom.c -o pgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qgeom.c -o qgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rgeom.c -o rgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dhyper.c -o dhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c phyper.c -o phyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qhyper.c -o qhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rhyper.c -o rhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnbinom.c -o dnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnbinom.c -o pnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnbinom.c -o qnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnbinom_mu.c -o qnbinom_mu.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rnbinom.c -o rnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dpois.c -o dpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ppois.c -o ppois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qpois.c -o qpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rpois.c -o rpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dweibull.c -o dweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pweibull.c -o pweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qweibull.c -o qweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rweibull.c -o rweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dlogis.c -o dlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c plogis.c -o plogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qlogis.c -o qlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c rlogis.c -o rlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnchisq.c -o dnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnchisq.c -o pnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnchisq.c -o qnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c dnbeta.c -o dnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnbeta.c -o pnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnbeta.c -o qnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnf.c -o pnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c pnt.c -o pnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnf.c -o qnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qnt.c -o qnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c ptukey.c -o ptukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c qtukey.c -o qtukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c toms708.c -o toms708.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c wilcox.c -o wilcox.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c signrank.c -o signrank.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -c std_unif.c -o std_unif.lo gcc -shared -fopenmp -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libRmath.so mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo qnbinom_mu.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath/standalone' + make pdf make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' creating doc/manual/version.tex collecting LaTeX docs for package 'base' ... 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Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'foreign' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'KernSmooth' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'rpart' ... Converting parsed Rd's to LaTeX .. collecting LaTeX docs for package 'class' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'nnet' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'spatial' ... Converting parsed Rd's to LaTeX .. collecting LaTeX docs for package 'mgcv' ... Converting parsed Rd's to LaTeX ............... PDF/LaTeX documentation: full reference index ... 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(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (./version.tex) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/var/lib/texmf/fo nts/map/pdftex/updmap/pdftex.map}{/usr/share/texlive/texmf-dist/fonts/enc/dvips /base/8r.enc}] No file fullrefman.toc. [1] [2] (./base-pkg.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) (/usr/share/texlive/texmf-dist/tex/latex/jknapltx/ursfs.fd) [3{/usr/share/texli ve/texmf-dist/fonts/enc/dvips/inconsolata/i4-t1-0.enc}] [4] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [5] [6] [7] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [8] [9] [10] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [11] [12] [13] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [14{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [15] [16] [17] [18] [19] [20] [21] [22] [23] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [24{/usr/share/texliv e/texmf-dist/fonts/enc/dvips/cm-super/cm-super-ts1.enc}] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2261--2261 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [36] [37] [38] [39] [40] [41] [42] [43] [44] Underfull \hbox (badness 1721) in paragraph at lines 2926--2930 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [45] [46] [47] [48] [49] [50] [51] Underfull \hbox (badness 2538) in paragraph at lines 3404--3407 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [52] [53] [54] [55] [56] Underfull \vbox (badness 10000) has occurred while \output is active [57] [58] [59] [60] [61] [62] [63] Underfull \hbox (badness 10000) in paragraph at lines 4200--4202 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] Underfull \hbox (badness 2521) in paragraph at lines 5551--5553 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6834--6834 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] [112] Underfull \hbox (badness 1303) in paragraph at lines 7730--7737 []\T1/zi4/m/n/10 file []\T1/ptm/m/n/10 can be used with []\T1/zi4/m/n/10 descri ption = "clipboard" []\T1/ptm/m/n/10 in mode []\T1/zi4/m/n/10 "r" []\T1/ptm/m/n /10 only. This reads the Underfull \hbox (badness 2261) in paragraph at lines 7741--7746 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [113] [114] [115] Underfull \vbox (badness 10000) has occurred while \output is active [116] [117] [118] [119] [120] [121] [122] [123] Underfull \hbox (badness 2096) in paragraph at lines 8474--8478 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [124] [125] Underfull \hbox (badness 2351) in paragraph at lines 8589--8592 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [126] [127] [128] [129] Underfull \hbox (badness 4479) in paragraph at lines 8906--8917 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [130] [131] [132] [133] [134] [135] Underfull \hbox (badness 1629) in paragraph at lines 9327--9339 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9327--9339 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] Underfull \hbox (badness 1178) in paragraph at lines 10193--10197 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] Underfull \hbox (badness 2744) in paragraph at lines 12533--12535 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [181] [182] [183] [184] [185] [186] [187] Underfull \vbox (badness 10000) has occurred while \output is active [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] Underfull \hbox (badness 2253) in paragraph at lines 14737--14739 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see Underfull \hbox (badness 1490) in paragraph at lines 14772--14775 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [211] Underfull \hbox (badness 1565) in paragraph at lines 14854--14858 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [212] Underfull \hbox (badness 4927) in paragraph at lines 14905--14907 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [213] [214] Underfull \hbox (badness 1466) in paragraph at lines 15056--15059 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [215] Underfull \vbox (badness 1418) has occurred while \output is active [216] Underfull \hbox (badness 10000) in paragraph at lines 15187--15191 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15198--15201 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [217] [218] [219] [220] Underfull \hbox (badness 3965) in paragraph at lines 15493--15497 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [221] [222] [223] [224] [225] [226] [227] [228] Underfull \hbox (badness 5260) in paragraph at lines 15995--15995 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [229] [230] [231] [232] Underfull \hbox (badness 4429) in paragraph at lines 16285--16288 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [233] Underfull \hbox (badness 10000) in paragraph at lines 16392--16394 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [234] Underfull \hbox (badness 2035) in paragraph at lines 16465--16469 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] Underfull \hbox (badness 2452) in paragraph at lines 17088--17092 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17088--17092 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [245] [246] Underfull \hbox (badness 1092) in paragraph at lines 17262--17267 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [247] [248] [249] [250] Underfull \hbox (badness 6741) in paragraph at lines 17515--17519 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [251] [252] [253] Underfull \vbox (badness 10000) has occurred while \output is active [254] [255] [256] [257] [258] [259] [260] Underfull \vbox (badness 10000) has occurred while \output is active [261] Underfull \vbox (badness 10000) has occurred while \output is active [262] [263] [264] [265] [266] [267] [268] [269] [270] [271] Underfull \hbox (badness 1769) in paragraph at lines 18988--18991 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [272] [273] [274] [275] Underfull \hbox (badness 10000) in paragraph at lines 19297--19299 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19303--19312 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [276] [277] [278] [279] [280] [281] [282] [283] [284] Underfull \hbox (badness 1442) in paragraph at lines 19911--19913 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [285] Underfull \hbox (badness 2452) in paragraph at lines 20007--20033 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20007--20033 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [286] [287] [288] [289] [290] [291] Underfull \hbox (badness 1248) in paragraph at lines 20405--20408 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [292] [293] [294] [295] Underfull \hbox (badness 4739) in paragraph at lines 20672--20674 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [296] [297] [298] [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] [309] [310] [311] [312] Underfull \hbox (badness 2469) in paragraph at lines 21830--21835 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [313] Underfull \hbox (badness 1675) in paragraph at lines 21917--21926 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , [314] Underfull \hbox (badness 3189) in paragraph at lines 21927--21940 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 21975--21978 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21975--21978 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [315] [316] Underfull \hbox (badness 1014) in paragraph at lines 22109--22114 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [317] [318] [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] Underfull \hbox (badness 1264) in paragraph at lines 22956--22964 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [329] Underfull \hbox (badness 4441) in paragraph at lines 22991--22994 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] Underfull \hbox (badness 5231) in paragraph at lines 23809--23811 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [341] [342] [343] [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] [357] Underfull \hbox (badness 6380) in paragraph at lines 24919--24925 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 24919--24925 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [358] [359] [360] [361] [362] [363] [364] [365] Underfull \hbox (badness 2790) in paragraph at lines 25432--25435 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25432--25435 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [366] [367] [368] [369] Underfull \hbox (badness 1194) in paragraph at lines 25760--25763 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [370] [371] [372] Underfull \hbox (badness 2368) in paragraph at lines 25967--25973 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [373] [374] [375] [376] [377] [378] Underfull \hbox (badness 10000) in paragraph at lines 26357--26360 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 10000) in paragraph at lines 26985--26987 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [388] [389] [390] [391] [392] [393] [394] Underfull \hbox (badness 2443) in paragraph at lines 27476--27484 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [395] [396] [397] [398] [399] [400] Underfull \hbox (badness 1881) in paragraph at lines 27906--27909 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are [401] Underfull \hbox (badness 6220) in paragraph at lines 27931--27933 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [402] Underfull \hbox (badness 2142) in paragraph at lines 28072--28076 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able [403] Underfull \hbox (badness 1968) in paragraph at lines 28129--28134 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [404] [405] [406] Underfull \hbox (badness 10000) in paragraph at lines 28425--28431 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28425--28431 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28425--28431 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28438--28441 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28464--28466 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [407] Underfull \hbox (badness 10000) in paragraph at lines 28510--28515 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28516--28527 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28516--28527 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28528--28531 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [408] [409] [410] [411] [412] Underfull \hbox (badness 10000) in paragraph at lines 28946--28950 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [413] [414] Underfull \hbox (badness 10000) in paragraph at lines 29093--29096 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [415] [416] Underfull \hbox (badness 7925) in paragraph at lines 29174--29178 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29174--29178 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29179--29188 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [417] [418] [419] [420] [421] [422] [423] [424] [425] [426] [427] [428] [429] [430] Underfull \hbox (badness 2726) in paragraph at lines 30193--30196 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [431] [432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443] [444] [445] [446] [447] [448] Underfull \vbox (badness 10000) has occurred while \output is active [449] [450] [451] [452] [453] [454] [455] [456] Underfull \hbox (badness 1533) in paragraph at lines 32001--32004 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [457] [458] [459] Underfull \hbox (badness 1163) in paragraph at lines 32172--32183 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [460] [461] [462] [463] [464] [465] [466] [467] Underfull \hbox (badness 6300) in paragraph at lines 32718--32720 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] Underfull \hbox (badness 10000) in paragraph at lines 33841--33845 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 33841--33845 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 33862--33864 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 33865--33869 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [484] [485] [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1655) in paragraph at lines 34467--34469 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [493] [494] [495] [496] [497] [498] [499] [500] [501] [502] [503] [504] [505] [506] [507] [508] [509] [510] Underfull \hbox (badness 2261) in paragraph at lines 35670--35675 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] [524] Underfull \hbox (badness 3668) in paragraph at lines 36705--36709 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [525] Underfull \hbox (badness 10000) in paragraph at lines 36796--36807 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [526] [527] [528] [529] [530] [531] [532] [533] [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] Underfull \hbox (badness 10000) in paragraph at lines 38428--38430 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [550] [551] [552] [553] [554] Underfull \hbox (badness 2913) in paragraph at lines 38846--38850 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [555] [556] [557] [558] Underfull \hbox (badness 1072) in paragraph at lines 39092--39096 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39097--39101 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39137--39143 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39137--39143 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39137--39143 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 39152--39159 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39152--39159 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39152--39159 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39152--39159 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [559] [560] [561] [562] Underfull \hbox (badness 2644) in paragraph at lines 39387--39391 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [563] [564] [565] [566] [567] [568] [569] [570] [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] Underfull \hbox (badness 1158) in paragraph at lines 40915--40917 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [585] [586] [587] [588] [589] [590] [591] [592] [593] Underfull \hbox (badness 1137) in paragraph at lines 41515--41521 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41533--41538 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [594] [595] Underfull \hbox (badness 1616) in paragraph at lines 41653--41658 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [596] [597] [598] [599] [600] [601] [602] [603] Underfull \hbox (badness 1472) in paragraph at lines 42199--42202 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [604] [605] [606] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42411. [607] [608] [609] [610] [611] [612] [613] [614] [615] [616] Underfull \vbox (badness 10000) has occurred while \output is active [617] Underfull \hbox (badness 10000) in paragraph at lines 43150--43154 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [618] [619] [620] [621] [622] Underfull \hbox (badness 10000) in paragraph at lines 43509--43512 [][][]\T1/zi4/m/sl/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [][]$https : / / developer . r-[]project . org / [623] [624] [625] Underfull \hbox (badness 10000) in paragraph at lines 43693--43697 [][][]\T1/zi4/m/sl/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 taskCallb ackManager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/sl/10 https : / / developer . [626] [627] [628] [629] [630] [631] [632] [633] [634] Underfull \hbox (badness 10000) in paragraph at lines 44341--44344 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [635] [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] [646] [647] Underfull \hbox (badness 1990) in paragraph at lines 45257--45265 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45257--45265 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [648] [649] [650] [651] [652] [653] [654] [655] [656] [657] [658] [659] [660] [661] [662] [663] [664] [665] [666] [667] [668] Underfull \hbox (badness 1014) in paragraph at lines 46694--46697 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [669] Underfull \hbox (badness 2401) in paragraph at lines 46827--46831 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [670] [671] Underfull \hbox (badness 3492) in paragraph at lines 46953--46955 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [672] Underfull \hbox (badness 2111) in paragraph at lines 47039--47044 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [673] [674] [675] [676] Underfull \hbox (badness 4001) in paragraph at lines 47287--47289 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [677] [678] [679] [680] [681] [682] Underfull \hbox (badness 5417) in paragraph at lines 47688--47692 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [683] Underfull \hbox (badness 10000) in paragraph at lines 47749--47753 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [684]) (./compiler-pkg.tex Chapter 2. [685] [686] [687] [688]) (./datasets-pkg.tex Chapter 3. [689] [690] [691] [692] [693] [694] [695] [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] [727] [728] [729] [730] [731] [732] [733] [734] [735] [736] [737] [738] [739] [740] [741] [742] [743] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3524--3524 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [744] [745] [746] [747] [748] [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764]) (./grDevices-pkg.tex Chapter 4. [765] [766] [767] [768] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 297--302 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/sl/10 axisTicks[][][]() []\T1 /ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1 /ptm/m/n/10 in [769] [770] [771] [772] [773] [774] [775] [776] [777] Underfull \hbox (badness 1424) in paragraph at lines 899--901 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [778] [779] [780] [781] [782] [783] Underfull \hbox (badness 5175) in paragraph at lines 1227--1229 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [784] Underfull \hbox (badness 2512) in paragraph at lines 1346--1348 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [785] [786] [787] [788] [789] Underfull \hbox (badness 1490) in paragraph at lines 1646--1651 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1659--1663 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [790] [791] [792] [793] [794] [795] Underfull \hbox (badness 1325) in paragraph at lines 2074--2084 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [796] Underfull \hbox (badness 10000) in paragraph at lines 2186--2188 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [797] [798] [799] Underfull \hbox (badness 6758) in paragraph at lines 2374--2377 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] Underfull \hbox (badness 10000) in paragraph at lines 3130--3131 [811] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] Underfull \vbox (badness 10000) has occurred while \output is active [826] [827] [828] Underfull \hbox (badness 1418) in paragraph at lines 4407--4414 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [829] [830] [831] [832] [833] [834] [835] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4872 \aliasA{symbol}{plotmath}{symbol} [836] [837] [838] [839] [840] [841] Underfull \hbox (badness 1584) in paragraph at lines 5265--5267 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5269--5276 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [842] [843] [844] [845] Underfull \hbox (badness 1377) in paragraph at lines 5571--5576 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [846] Underfull \hbox (badness 1377) in paragraph at lines 5675--5680 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [847] Underfull \hbox (badness 7344) in paragraph at lines 5744--5746 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [848] [849] Underfull \hbox (badness 2035) in paragraph at lines 5883--5892 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5883--5892 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5883--5892 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [850] Underfull \hbox (badness 10000) in paragraph at lines 5950--5955 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [851] [852] Underfull \hbox (badness 1546) in paragraph at lines 6090--6098 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [853] [854] [855] [856] [857] [858] [859] Underfull \hbox (badness 6625) in paragraph at lines 6534--6537 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [860] Underfull \hbox (badness 10000) in paragraph at lines 6638--6641 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [861] [862] [863] [864] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6875--6875 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [865] [866] [867] [868] [869] [870] [871] [872] [873] Underfull \hbox (badness 1189) in paragraph at lines 7503--7505 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [874] Underfull \hbox (badness 10000) in paragraph at lines 7608--7610 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [875] [876] [877] [878] [879] Underfull \hbox (badness 3780) in paragraph at lines 7923--7929 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/s l/10 "AvantGarde"[]\T1/ptm/m/n/10 , [880] [881] [882] [883] [884]) (./graphics-pkg.tex Chapter 5. [885] [886] [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] [899] [900] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1037--1037 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [901] [902] [903] [904] [905] [906] Underfull \hbox (badness 4634) in paragraph at lines 1410--1413 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [907] [908] [909] [910] [911] [912] [913] [914] [915] [916] [917] [918] [919] [920] [921] Underfull \hbox (badness 1728) in paragraph at lines 2388--2390 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [922] Underfull \hbox (badness 1009) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [923] [924] [925] [926] [927] [928] [929] [930] [931] [932] [933] [934] [935] [936] [937] [938] [939] [940] [941] [942] [943] [944] Underfull \vbox (badness 10000) has occurred while \output is active [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] [955] [956] Underfull \hbox (badness 3229) in paragraph at lines 4733--4738 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [957] [958] [959] [960] [961] Underfull \hbox (badness 1107) in paragraph at lines 5233--5239 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [962] Underfull \hbox (badness 10000) in paragraph at lines 5362--5365 [963] Underfull \hbox (badness 10000) in paragraph at lines 5423--5425 [964 ] [965 ] [966] [967] [968] [969] [970] [971] [972] [973] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6097 \aliasA{plot}{plot.default}{plot} [974] [975] [976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6997--6998 [][] [988 ] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] Underfull \hbox (badness 4954) in paragraph at lines 9109--9111 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9111--9113 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1020] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9191 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9191 \HeaderA{units}{Graphical Units}{units} [1021] [1022] [1023] [1024]) (./grid-pkg.tex Chapter 6. [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] [1033] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1043] Underfull \vbox (badness 10000) has occurred while \output is active [1044] [1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1073] [1074] [1075] [1076] [1077] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] Underfull \vbox (badness 10000) has occurred while \output is active [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] Underfull \hbox (badness 1067) in paragraph at lines 4842--4845 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1101] [1102] [1103] [1104] [1105] Underfull \hbox (badness 7256) in paragraph at lines 5193--5195 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1106] [1107] [1108] [1109] [1110] [1111] [1112] Underfull \hbox (badness 2142) in paragraph at lines 5647--5651 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1113] [1114] Underfull \hbox (badness 4699) in paragraph at lines 5729--5734 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1115] [1116] [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144]) (./methods-pkg.tex Chapter 7. [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] Underfull \vbox (badness 10000) has occurred while \output is active [1153] Underfull \vbox (badness 10000) has occurred while \output is active [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] Underfull \hbox (badness 2237) in paragraph at lines 1384--1386 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1163] [1164] [1165] [1166] [1167] [1168] [1169] [1170] Underfull \hbox (badness 10000) in paragraph at lines 1980--1985 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1980--1985 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1171] [1172] [1173] Underfull \hbox (badness 2213) in paragraph at lines 2212--2217 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1174] [1175] [1176] [1177] [1178] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1179] [1180] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2744--2749 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1181] [1182] [1183] [1184] [1185] [1186] [1187] Underfull \hbox (badness 1102) in paragraph at lines 3301--3303 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1188] [1189] [1190] [1191] [1192] Underfull \hbox (badness 10000) in paragraph at lines 3638--3647 []\T1/ptm/m/n/10 The [1193] [1194] Underfull \hbox (badness 10000) in paragraph at lines 3758--3759 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1195] Underfull \hbox (badness 10000) in paragraph at lines 3842--3843 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1196] [1197] [1198] [1199] [1200] [1201] [1202] [1203] Underfull \hbox (badness 1769) in paragraph at lines 4473--4479 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4473--4479 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1204] [1205] [1206] [1207] [1208] [1209] [1210] [1211] [1212] Underfull \vbox (badness 10000) has occurred while \output is active [1213] Underfull \vbox (badness 10000) has occurred while \output is active [1214] [1215] [1216] Underfull \hbox (badness 4036) in paragraph at lines 5438--5441 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1217] Underfull \hbox (badness 3803) in paragraph at lines 5513--5515 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1218] [1219] [1220] Underfull \hbox (badness 1087) in paragraph at lines 5744--5749 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] Underfull \hbox (badness 1675) in paragraph at lines 6451--6457 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1229] [1230] [1231] [1232] Underfull \vbox (badness 10000) has occurred while \output is active [1233] [1234] [1235] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6972 \aliasA{S4}{S3Part}{S4} [1236] [1237] [1238] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7228 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7230 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7231 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7233 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7234 \aliasA{Summary}{S4groupGeneric}{Summary} [1239] Underfull \hbox (badness 2050) in paragraph at lines 7295--7299 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1240] [1241] Underfull \hbox (badness 1286) in paragraph at lines 7483--7485 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] [1279] [1280] Underfull \hbox (badness 1158) in paragraph at lines 10490--10493 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1281] Underfull \hbox (badness 1852) in paragraph at lines 10568--10572 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1282] [1283] [1284] [1285]) (./parallel-pkg.tex [1286] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1287] [1288] [1289] [1290] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1291] [1292] [1293] [1294] [1295] [1296] [1297] [1298] [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] Underfull \hbox (badness 3386) in paragraph at lines 1400--1403 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1307] [1308] [1309]) (./splines-pkg.tex [1310] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324]) (./stats-pkg.tex Chapter 10. [1325] [1326] [1327] [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1346] [1347] [1348] [1349] [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] Underfull \hbox (badness 2503) in paragraph at lines 3557--3560 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1377] [1378] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3670. [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] [1395] Underfull \hbox (badness 3989) in paragraph at lines 4816--4823 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1396] [1397] [1398] [1399] [1400] [1401] [1402] [1403] [1404] Underfull \hbox (badness 2556) in paragraph at lines 5470--5473 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1405] [1406] [1407] [1408] [1409] [1410] Underfull \hbox (badness 2503) in paragraph at lines 5882--5886 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] Underfull \hbox (badness 7081) in paragraph at lines 6674--6677 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6678--6680 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1424] [1425] [1426] [1427] [1428] Underfull \vbox (badness 10000) has occurred while \output is active [1429] [1430] [1431] Underfull \vbox (badness 10000) has occurred while \output is active [1432] [1433] [1434] [1435] [1436] Underfull \hbox (badness 10000) in paragraph at lines 7574--7577 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/sl/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] [1455] [1456] Underfull \vbox (badness 10000) has occurred while \output is active [1457] [1458] [1459] [1460] [1461] Underfull \hbox (badness 2626) in paragraph at lines 9271--9274 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1462] [1463] Underfull \hbox (badness 2503) in paragraph at lines 9378--9382 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] Underfull \hbox (badness 4518) in paragraph at lines 10733--10738 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1483] [1484] [1485] [1486] [1487] Underfull \hbox (badness 2142) in paragraph at lines 11095--11098 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11114--11117 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1488] Underfull \hbox (badness 1708) in paragraph at lines 11176--11180 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1489] [1490] [1491] [1492] [1493] Underfull \hbox (badness 1694) in paragraph at lines 11572--11575 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12053 \aliasA{hat}{influence.measures}{hat} [1502] [1503] Underfull \hbox (badness 1484) in paragraph at lines 12198--12200 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] Underfull \hbox (badness 10000) in paragraph at lines 12785--12787 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1513] [1514] [1515] [1516] [1517] Underfull \hbox (badness 2894) in paragraph at lines 13127--13131 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1518] [1519] [1520] [1521] [1522] [1523] Underfull \hbox (badness 1496) in paragraph at lines 13555--13561 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1524] [1525] [1526] [1527] [1528] [1529] Underfull \hbox (badness 4518) in paragraph at lines 13958--13963 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1530] [1531] [1532] [1533] [1534] [1535] [1536] [1537] [1538] [1539] Underfull \hbox (badness 4518) in paragraph at lines 14620--14625 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1540] [1541] Underfull \hbox (badness 6412) in paragraph at lines 14760--14764 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14767--14769 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1542] [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] Underfull \hbox (badness 2503) in paragraph at lines 15843--15847 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1558] [1559] [1560] [1561] [1562] [1563] [1564] Underfull \hbox (badness 10000) in paragraph at lines 16356--16362 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16356--16362 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] [1577] [1578] [1579] [1580] [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] [1589] Underfull \hbox (badness 1158) in paragraph at lines 18014--18017 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1590] [1591] Underfull \vbox (badness 10000) has occurred while \output is active [1592] Underfull \vbox (badness 10000) has occurred while \output is active [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] Underfull \hbox (badness 1377) in paragraph at lines 19057--19062 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19062--19065 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19075--19079 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19075--19079 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19083--19087 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1606] [1607] [1608] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19308--19308 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Underfull \vbox (badness 10000) has occurred while \output is active [1609] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19311--19311 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1610] [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 1337) in paragraph at lines 19773--19776 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1616] [1617] [1618] [1619] [1620] [1621] [1622] [1623] Underfull \hbox (badness 10000) in paragraph at lines 20242--20248 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1624] [1625] [1626] [1627] [1628] [1629] [1630] Underfull \hbox (badness 1194) in paragraph at lines 20669--20672 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1631] [1632] [1633] [1634] [1635] [1636] Underfull \hbox (badness 2503) in paragraph at lines 21047--21050 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21074--21076 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1637] [1638] [1639] [1640] [1641] [1642] [1643] [1644] [1645] [1646] [1647] [1648] [1649] [1650] [1651] [1652] [1653] Underfull \hbox (badness 10000) in paragraph at lines 22152--22158 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] [1675] [1676] Underfull \hbox (badness 1337) in paragraph at lines 23628--23634 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] Underfull \hbox (badness 1436) in paragraph at lines 24118--24121 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, [1685] Underfull \hbox (badness 10000) in paragraph at lines 24256--24257 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 1824) in paragraph at lines 25226--25232 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25226--25232 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25247--25250 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] Underfull \hbox (badness 2165) in paragraph at lines 25822--25827 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1710] [1711] [1712] [1713] Underfull \hbox (badness 1867) in paragraph at lines 26032--26034 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26048--26052 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] [1728] [1729] [1730] [1731] [1732] [1733] [1734] [1735] [1736] Underfull \vbox (badness 10000) has occurred while \output is active [1737] Underfull \hbox (badness 3514) in paragraph at lines 27700--27705 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1738] [1739] [1740] [1741] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27934--27934 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1742] Underfull \hbox (badness 3514) in paragraph at lines 27970--27976 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1743] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28030--28030 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1744] [1745] Underfull \hbox (badness 3514) in paragraph at lines 28203--28208 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1746] [1747] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1748] Underfull \hbox (badness 3514) in paragraph at lines 28355--28360 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1749] Underfull \hbox (badness 3514) in paragraph at lines 28449--28454 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1750] [1751] Underfull \hbox (badness 6691) in paragraph at lines 28541--28546 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] Underfull \hbox (badness 4024) in paragraph at lines 29028--29031 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1760] [1761] [1762] [1763] [1764] [1765] [1766] [1767] [1768] Underfull \hbox (badness 5431) in paragraph at lines 29631--29633 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1769] [1770] [1771] Underfull \hbox (badness 5431) in paragraph at lines 29841--29844 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1772] [1773] [1774] [1775] [1776] Underfull \hbox (badness 1337) in paragraph at lines 30156--30160 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1777] [1778] [1779] Underfull \hbox (badness 1127) in paragraph at lines 30293--30296 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1780] [1781] Underfull \hbox (badness 1616) in paragraph at lines 30499--30502 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] [1796] [1797] [1798] [1799] [1800] Underfull \hbox (badness 3557) in paragraph at lines 31726--31730 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1801] [1802] [1803] [1804] [1805] [1806] Underfull \hbox (badness 1337) in paragraph at lines 32093--32097 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] Underfull \hbox (badness 1337) in paragraph at lines 32621--32625 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1815] [1816] [1817] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32829--32829 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1818] [1819] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32990--32990 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1820] [1821] [1822] [1823] [1824]) (./stats4-pkg.tex Chapter 11. [1825] [1826] [1827] Underfull \vbox (badness 10000) has occurred while \output is active [1828] [1829] [1830] [1831] [1832] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1833] [1834] [1835]) (./tcltk-pkg.tex [1836] Chapter 12. [1837] [1838] [1839] [1840] [1841] [1842] [1843] Underfull \vbox (badness 10000) has occurred while \output is active [1844] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [1845] [1846] [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] [1855] [1856]) (./tools-pkg.tex Chapter 13. [1857] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1858] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1859] [1860] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [1861] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [1862] [1863] Underfull \hbox (badness 1142) in paragraph at lines 464--468 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] Underfull \hbox (badness 1014) in paragraph at lines 1220--1222 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1226--1228 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [1875] Underfull \hbox (badness 10000) in paragraph at lines 1263--1266 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1263--1266 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1876] [1877] [1878] [1879] [1880] Underfull \hbox (badness 10000) in paragraph at lines 1637--1640 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/sl/10 CRAN_aliases_db[]\T1/ptm /m/n/10 , []\T1/zi4/m/sl/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_current_db []\T1/ptm/m/n/10 and [1881] [1882] Underfull \hbox (badness 4096) in paragraph at lines 1756--1764 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1766--1768 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1883] [1884] [1885] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1967 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.1968 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1886] [1887] [1888] [1889] [1890] [1891] [1892] Underfull \hbox (badness 3386) in paragraph at lines 2442--2445 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [1893] [1894] Underfull \hbox (badness 4096) in paragraph at lines 2582--2590 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1895] [1896] [1897] [1898] [1899] [1900] [1901] [1902] [1903] [1904] [1905] [1906] [1907] Underfull \hbox (badness 1424) in paragraph at lines 3516--3518 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1908] [1909] [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] Underfull \hbox (badness 10000) in paragraph at lines 4232--4234 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1919] [1920] Underfull \hbox (badness 10000) in paragraph at lines 4388--4391 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/sl/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/sl/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1921] [1922] [1923] [1924] [1925] [1926] Underfull \hbox (badness 1796) in paragraph at lines 4745--4750 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [1927] Underfull \hbox (badness 1838) in paragraph at lines 4831--4837 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4831--4837 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1928] [1929] [1930] [1931] Underfull \hbox (badness 2197) in paragraph at lines 5112--5122 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [1932] Underfull \hbox (badness 1571) in paragraph at lines 5178--5182 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1933] [1934] [1935]) (./utils-pkg.tex [1936] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1948] [1949] Underfull \hbox (badness 3861) in paragraph at lines 934--939 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1950] [1951] [1952] Underfull \hbox (badness 10000) in paragraph at lines 1139--1141 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1953] [1954] [1955] Underfull \vbox (badness 10000) has occurred while \output is active [1956] [1957] [1958] [1959] [1960] Underfull \hbox (badness 1371) in paragraph at lines 1666--1668 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] [1970] Underfull \hbox (badness 2057) in paragraph at lines 2386--2388 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1971] Underfull \hbox (badness 2150) in paragraph at lines 2461--2468 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2461--2468 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [1972] [1973] [1974] [1975] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2738 ... the Clipboard in MS Windows}{clipboard} [1976] [1977] [1978] [1979] [1980] [1981] [1982] [1983] [1984] [1985] [1986] [1987] [1988] [1989] [1990] [1991] [1992] [1993] [1994] Underfull \hbox (badness 6842) in paragraph at lines 4048--4053 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1995] Underfull \hbox (badness 1430) in paragraph at lines 4111--4115 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1996] Underfull \hbox (badness 1184) in paragraph at lines 4182--4198 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4182--4198 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4182--4198 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [1997] [1998] Underfull \hbox (badness 10000) in paragraph at lines 4332--4334 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1999] [2000] [2001] [2002] [2003] [2004] [2005] [2006] [2007] [2008] [2009] [2010] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5111 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5111 ...mat Unordered and Ordered Lists}{format} [2011] [2012] [2013] [2014] [2015] [2016] [2017] [2018] Underfull \hbox (badness 1622) in paragraph at lines 5634--5638 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2019] [2020] [2021] [2022] [2023] Underfull \hbox (badness 1448) in paragraph at lines 6019--6024 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] Underfull \hbox (badness 1371) in paragraph at lines 6567--6569 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2032] Underfull \hbox (badness 1502) in paragraph at lines 6656--6662 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6656--6662 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2033] [2034] [2035] Underfull \hbox (badness 10000) in paragraph at lines 6833--6842 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6833--6842 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2036] Underfull \hbox (badness 2150) in paragraph at lines 6895--6898 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2037] [2038] Underfull \hbox (badness 3118) in paragraph at lines 7034--7036 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2039] [2040] Underfull \hbox (badness 1325) in paragraph at lines 7213--7217 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2041] Underfull \hbox (badness 1424) in paragraph at lines 7305--7308 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2042] Underfull \hbox (badness 3219) in paragraph at lines 7377--7384 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7377--7384 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7377--7384 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7377--7384 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7385--7388 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2043] Underfull \hbox (badness 1024) in paragraph at lines 7514--7517 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2044] Underfull \hbox (badness 10000) in paragraph at lines 7547--7552 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2045] Underfull \hbox (badness 5133) in paragraph at lines 7606--7610 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2046] [2047] [2048] [2049] [2050] [2051] [2052] [2053] [2054] [2055] Underfull \hbox (badness 10000) in paragraph at lines 8270--8272 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2056] [2057] [2058] [2059] [2060] [2061] [2062] [2063] [2064] [2065] [2066] [2067] Underfull \hbox (badness 2310) in paragraph at lines 9057--9062 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] Underfull \hbox (badness 1248) in paragraph at lines 9628--9632 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2076] Underfull \hbox (badness 1789) in paragraph at lines 9706--9708 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2077] [2078] [2079] [2080] Underfull \hbox (badness 2600) in paragraph at lines 9930--9933 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 1097) in paragraph at lines 10567--10570 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2089] [2090] Underfull \hbox (badness 3000) in paragraph at lines 10703--10708 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2091] [2092] [2093] [2094] [2095] [2096] [2097] [2098] Underfull \hbox (badness 2134) in paragraph at lines 11298--11303 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2099] Underfull \hbox (badness 10000) in paragraph at lines 11354--11359 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11354--11359 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2100] [2101] [2102] [2103] [2104] [2105] [2106] [2107] Underfull \hbox (badness 1824) in paragraph at lines 11852--11856 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . Ac-cessed [2108] [2109] [2110] [2111] [2112] [2113] Underfull \hbox (badness 4060) in paragraph at lines 12297--12300 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/sl/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/sl/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able Overfull \hbox (18.77168pt too wide) in paragraph at lines 12320--12320 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2114] [2115] [2116] [2117] Underfull \hbox (badness 2150) in paragraph at lines 12575--12577 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / www . gnu . org / software / emac s / manual / [2118] [2119] [2120] Underfull \hbox (badness 10000) in paragraph at lines 12795--12799 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/sl/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able [2121] Underfull \hbox (badness 10000) in paragraph at lines 12828--12834 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12843--12849 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2122] [2123] Underfull \hbox (badness 1009) in paragraph at lines 13018--13030 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If [2124] Underfull \hbox (badness 4779) in paragraph at lines 13058--13060 []\T1/ptm/m/n/10 The file `\T1/zi4/m/sl/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/sl/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and Underfull \hbox (badness 1077) in paragraph at lines 13088--13095 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2125] [2126] [2127] [2128] [2129] [2130] Underfull \hbox (badness 3780) in paragraph at lines 13513--13519 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/sl/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13531--13534 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/sl/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2131] [2132] [2133] [2134] Underfull \hbox (badness 2302) in paragraph at lines 13741--13743 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2135] [2136] [2137] [2138] Underfull \hbox (badness 4441) in paragraph at lines 14040--14045 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/sl/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/sl/10 deparse[][][](control = \T1/ptm/m/sl/10 control\T1/zi4/ m/sl/10 ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 14049--14052 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2139] [2140] [2141] [2142] [2143] [2144] [2145] Underfull \hbox (badness 2932) in paragraph at lines 14480--14487 []\T1/ptm/m/n/10 If []\T1/zi4/m/sl/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14480--14487 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/sl/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. Ob- [2146] [2147] Underfull \hbox (badness 1460) in paragraph at lines 14644--14653 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/sl/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/sl/10 tar []\T1/ptm/m/n /10 which used Underfull \hbox (badness 1019) in paragraph at lines 14662--14674 []\T1/ptm/m/n/10 For GNU []\T1/zi4/m/sl/10 tar[]\T1/ptm/m/n/10 , `[]\T1/zi4/m/s l/10 --format=ustar[]\T1/ptm/m/n/10 ' forces a more portable for-mat. (The de-f ault is set at Underfull \hbox (badness 1527) in paragraph at lines 14662--14674 \T1/ptm/m/n/10 com-pi-la-tion and will be shown at the end of the out-put from []\T1/zi4/m/sl/10 tar --help[]\T1/ptm/m/n/10 : for ver-sion [2148] [2149] Underfull \hbox (badness 6510) in paragraph at lines 14794--14798 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/sl/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/sl/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14801--14804 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14801--14804 \T1/zi4/m/sl/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2150] [2151] [2152] [2153] [2154] [2155] [2156] [2157] [2158] Underfull \hbox (badness 10000) in paragraph at lines 15474--15479 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/sl/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/sl/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15474--15479 [][][]\T1/zi4/m/sl/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15480--15482 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See [2159] Underfull \hbox (badness 10000) in paragraph at lines 15539--15542 [][][]\T1/zi4/m/sl/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174]) [2175] [2176] (./KernSmooth-pkg.tex Chapter 15. [2177] [2178] [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186]) (./MASS-pkg.tex Chapter 16. [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.confint.g lm}) has been already used, duplicate ignored \relax l.1479 ...{confint.glm}{confint-MASS}{confint.glm} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.confint.n ls}) has been already used, duplicate ignored \relax l.1480 ...{confint.nls}{confint-MASS}{confint.nls} [2208] [2209] [2210] [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] Underfull \hbox (badness 10000) in paragraph at lines 2789--2794 []\T1/zi4/m/sl/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/s l/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "negative [2226] [2227] Underfull \hbox (badness 4686) in paragraph at lines 2961--2963 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 1117) in paragraph at lines 4740--4743 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [2253] Underfull \hbox (badness 1117) in paragraph at lines 4819--4822 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269] [2270] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6086 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk.1}) h as been already used, duplicate ignored \relax l.6086 ...sical N, P, K Factorial Experiment}{npk} [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] [2280] [2281] [2282] Underfull \hbox (badness 1117) in paragraph at lines 6987--6994 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [2283] Underfull \hbox (badness 3138) in paragraph at lines 7058--7064 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2284] [2285] [2286] Underfull \hbox (badness 1910) in paragraph at lines 7237--7240 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/sl/10 min(p, [2287] [2288] [2289] [2290] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.profile.g lm}) has been already used, duplicate ignored \relax l.7514 ... for Profiling glm Objects}{profile.glm} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.profile.g lm.1}) has been already used, duplicate ignored \relax l.7514 ... for Profiling glm Objects}{profile.glm} [2291] [2292] [2293] [2294] Underfull \hbox (badness 4686) in paragraph at lines 7809--7811 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2295] [2296] [2297] [2298] [2299] [2300] [2301] [2302] [2303] [2304] [2305] [2306] [2307] [2308] [2309] [2310] [2311] [2312] [2313] [2314] [2315] [2316] [2317] [2318] [2319] [2320] [2321] [2322] [2323] [2324] [2325] [2326] [2327] [2328] [2329] [2330] [2331]) (./Matrix-pkg.tex [2332] Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 35--38 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 35--38 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2333] Underfull \hbox (badness 1769) in paragraph at lines 89--92 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2334] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.all.equal }) has been already used, duplicate ignored \relax l.182 ...{all.equal}{all.equal-methods}{all.equal} [2335] Underfull \hbox (badness 3098) in paragraph at lines 264--266 []\T1/ptm/m/n/10 optional ar-gu-ments passed to the de-fault method for generic func-tion [2336] [2337] [2338] Underfull \hbox (badness 5119) in paragraph at lines 492--496 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2339] [2340] Underfull \hbox (badness 2035) in paragraph at lines 590--593 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/sl/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/sl/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/sl/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2341] [2342] [2343] Underfull \hbox (badness 5817) in paragraph at lines 913--916 []\T1/ptm/m/n/10 Class [][][]\T1/zi4/m/sl/10 BunchKaufmanFactorization[][][][]\ T1/ptm/m/n/10 , di-rectly. Class [][][]\T1/zi4/m/sl/10 MatrixFactorization[][][ ][]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 6758) in paragraph at lines 919--924 []\T1/ptm/m/n/10 Objects can be gen-er-ated di-rectly by calls of the form []\T 1/zi4/m/sl/10 new("BunchKaufman", ...) Underfull \hbox (badness 2961) in paragraph at lines 919--924 []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 new("pBunchKaufman", ...)[]\T1/ptm/m/n/10 , but they are more typ-i-cally ob-tained as the value of [2344] [2345] Underfull \hbox (badness 10000) in paragraph at lines 1081--1086 []\T1/ptm/m/n/10 An ob-ject rep-re-sent-ing the fac-tor-iza-tion, in-her-it-ing from vir-tual class [2346] [2347] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.cbind2.Rd ash.methods}) has been already used, duplicate ignored \relax l.1185 ... on cbind2/rbind2}{cbind2.Rdash.methods} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.cbind2}) has been already used, duplicate ignored \relax l.1186 \aliasA{cbind2}{cbind2-methods}{cbind2} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rbind2}) has been already used, duplicate ignored \relax l.1195 \aliasA{rbind2}{cbind2-methods}{rbind2} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rbind2.Rd ash.methods}) has been already used, duplicate ignored \relax l.1204 ...s}{cbind2-methods}{rbind2.Rdash.methods} [2348] Underfull \hbox (badness 10000) in paragraph at lines 1322--1329 []\T1/ptm/m/n/10 The im-ple-men-ta-tion of class []\T1/zi4/m/sl/10 CHMfactor [] \T1/ptm/m/n/10 is based on CHOLMOD's C-level [2349] [2350] [2351] [2352] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol}) ha s been already used, duplicate ignored \relax l.1625 \aliasA{chol}{chol-methods}{chol} Underfull \hbox (badness 6220) in paragraph at lines 1656--1658 []\T1/ptm/m/n/10 Methods for [][][]\T1/zi4/m/sl/10 sparseMatrix[][][] []\T1/ptm /m/n/10 are built on CHOLMOD rou-tines []\T1/zi4/m/sl/10 cholmod_analyze []\T1/ ptm/m/n/10 and [2353] Underfull \hbox (badness 2334) in paragraph at lines 1730--1734 []\T1/ptm/m/n/10 The LA-PACK source code, in-clud-ing doc-u-men-ta-tion; see [] []$\T1/zi4/m/sl/10 https : / / netlib . org / lapack / Underfull \hbox (badness 1616) in paragraph at lines 1730--1734 \T1/zi4/m/sl/10 double / dpstrf . f$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 h ttps : / / netlib . org / lapack / double / dpotrf . f$[][]\T1/ptm/m/n/10 , and [][]$\T1/zi4/m/sl/10 https : / / netlib . [2354] Underfull \vbox (badness 10000) has occurred while \output is active [2355] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol2inv} ) has been already used, duplicate ignored \relax l.1854 ...sA{chol2inv}{chol2inv-methods}{chol2inv} [2356] [2357] Underfull \hbox (badness 10000) in paragraph at lines 2005--2008 []\T1/ptm/m/n/10 Class [][][]\T1/zi4/m/sl/10 CholeskyFactorization[][][][]\T1/p tm/m/n/10 , di-rectly. Class [][][]\T1/zi4/m/sl/10 MatrixFactorization[][][][]\ T1/ptm/m/n/10 , by class Underfull \hbox (badness 7722) in paragraph at lines 2011--2019 []\T1/ptm/m/n/10 Objects can be gen-er-ated di-rectly by calls of the form []\T 1/zi4/m/sl/10 new("Cholesky", ...) []\T1/ptm/m/n/10 or Underfull \hbox (badness 1990) in paragraph at lines 2051--2060 []\T1/ptm/m/n/10 In \T1/ptm/b/n/10 Ma-trix []\T1/zi4/m/sl/10 < 1.6-0[]\T1/ptm/m /n/10 , class []\T1/zi4/m/sl/10 Cholesky []\T1/ptm/m/n/10 ex-tended [][][]\T1/z i4/m/sl/10 dtrMatrix[][][] []\T1/ptm/m/n/10 and class []\T1/zi4/m/sl/10 pCholes ky []\T1/ptm/m/n/10 ex-tended Underfull \hbox (badness 2334) in paragraph at lines 2066--2070 []\T1/ptm/m/n/10 The LA-PACK source code, in-clud-ing doc-u-men-ta-tion; see [] []$\T1/zi4/m/sl/10 https : / / netlib . org / lapack / Underfull \hbox (badness 1616) in paragraph at lines 2066--2070 \T1/zi4/m/sl/10 double / dpstrf . f$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 h ttps : / / netlib . org / lapack / double / dpotrf . f$[][]\T1/ptm/m/n/10 , and [][]$\T1/zi4/m/sl/10 https : / / netlib . [2358] [2359] Underfull \hbox (badness 6220) in paragraph at lines 2185--2187 []\T1/ptm/m/n/10 Methods for [][][]\T1/zi4/m/sl/10 sparseMatrix[][][] []\T1/ptm /m/n/10 are built on CHOLMOD rou-tines []\T1/zi4/m/sl/10 cholmod_analyze []\T1/ ptm/m/n/10 and [2360] [2361] Underfull \hbox (badness 2334) in paragraph at lines 2315--2319 []\T1/ptm/m/n/10 The LA-PACK source code, in-clud-ing doc-u-men-ta-tion; see [] []$\T1/zi4/m/sl/10 https : / / netlib . org / lapack / Underfull \hbox (badness 1616) in paragraph at lines 2315--2319 \T1/zi4/m/sl/10 double / dpstrf . f$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 h ttps : / / netlib . org / lapack / double / dpotrf . f$[][]\T1/ptm/m/n/10 , and [][]$\T1/zi4/m/sl/10 https : / / netlib . [2362] Underfull \vbox (badness 10000) has occurred while \output is active [2363] Underfull \vbox (badness 10000) has occurred while \output is active [2364] [2365] [2366] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colMeans} ) has been already used, duplicate ignored \relax l.2696 ...asA{colMeans}{colSums-methods}{colMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums}) has been already used, duplicate ignored \relax l.2704 \aliasA{colSums}{colSums-methods}{colSums} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowMeans} ) has been already used, duplicate ignored \relax l.2711 ...asA{rowMeans}{colSums-methods}{rowMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowSums}) has been already used, duplicate ignored \relax l.2719 \aliasA{rowSums}{colSums-methods}{rowSums} [2367] [2368] [2369] Underfull \hbox (badness 3547) in paragraph at lines 2888--2891 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2370] [2371] [2372] [2373] [2374] [2375] Underfull \hbox (badness 1983) in paragraph at lines 3390--3398 []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 unpackedMatrix[][][][]\T1/ptm/m/n/10 . Al-ter-na-tively into the (cur-rently) three sub-classes [][][]\T1/zi4/m/sl/ 10 ddenseMatrix[][][][]\T1/ptm/m/n/10 , [2376] [2377] [2378] [2379] Underfull \hbox (badness 2717) in paragraph at lines 3712--3716 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2380] Underfull \hbox (badness 3417) in paragraph at lines 3828--3830 []\T1/zi4/m/sl/10 .sparseDiagonal() []\T1/ptm/m/n/10 ex-ists pri-mar-ily to lev er-age ef-fi-cient C-level meth-ods avail-able for [2381] [2382] Underfull \hbox (badness 8019) in paragraph at lines 3933--3935 []\T1/zi4/m/sl/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/sl/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 3936--3940 []\T1/zi4/m/sl/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2383] [2384] [2385] [2386] Underfull \hbox (badness 1902) in paragraph at lines 4263--4265 [][][]\T1/zi4/m/sl/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/sl/10 zapsmall(x, Underfull \hbox (badness 2020) in paragraph at lines 4300--4303 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/sl/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2387] [2388] [2389] Underfull \hbox (badness 4378) in paragraph at lines 4503--4512 []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/sl/10 chol[][][]() []\T1/ptm/m/n/10 is typ- i-cally used, e.g., see []\T1/zi4/m/sl/10 selectMethod("coerce", c(from="dsyMat rix", [2390] [2391] [2392] [2393] Underfull \hbox (badness 10000) in paragraph at lines 4834--4837 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "dMatrix"[]\T1/ptm/m/n/10 , by class [ ]\T1/zi4/m/sl/10 "dsparseMatrix"[]\T1/ptm/m/n/10 ; class []\T1/zi4/m/sl/10 "spa rseMatrix"[]\T1/ptm/m/n/10 , by classes [2394] Underfull \hbox (badness 4518) in paragraph at lines 4929--4932 []\T1/zi4/m/sl/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/sl/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 type = Underfull \hbox (badness 3690) in paragraph at lines 4932--4935 []\T1/zi4/m/sl/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/sl/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 type = [2395] [2396] Underfull \hbox (badness 2318) in paragraph at lines 5035--5039 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/sl/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/sl/10 "dMatrix"[]\T1/ptm/m/n/10 , [2397] Underfull \hbox (badness 3240) in paragraph at lines 5151--5155 []\T1/zi4/m/sl/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/sl/10 determinant[][][](x) [2398] [2399] [2400] [2401] Underfull \hbox (badness 10000) in paragraph at lines 5399--5401 []\T1/ptm/m/n/10 a ma-trix fac-tor-iza-tion, typ-i-cally in-her-it-ing from vir -tual class [2402] Underfull \hbox (badness 10000) in paragraph at lines 5522--5529 []\T1/zi4/m/sl/10 signature(x = "CHMfactor")[]\T1/ptm/m/n/10 : as []\T1/zi4/m/s l/10 expand2[]\T1/ptm/m/n/10 , but re-turn-ing []\T1/zi4/m/sl/10 list(P, L)[]\T 1/ptm/m/n/10 . Underfull \hbox (badness 1776) in paragraph at lines 5522--5529 []\T1/zi4/m/sl/10 expand(x)[["P"]] []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 expan d2(x)[["P1"]] []\T1/ptm/m/n/10 rep-re-sent the same per-mu-ta-tion ma-trix Underfull \hbox (badness 10000) in paragraph at lines 5529--5544 []\T1/zi4/m/sl/10 signature(x = "sparseLU")[]\T1/ptm/m/n/10 : as []\T1/zi4/m/sl /10 expand2[]\T1/ptm/m/n/10 , but re-turn-ing []\T1/zi4/m/sl/10 list(P, L, U, Q )[]\T1/ptm/m/n/10 . Underfull \hbox (badness 10000) in paragraph at lines 5544--5549 []\T1/zi4/m/sl/10 signature(x = "denseLU")[]\T1/ptm/m/n/10 : as []\T1/zi4/m/sl/ 10 expand2[]\T1/ptm/m/n/10 , but re-turn-ing []\T1/zi4/m/sl/10 list(L, U, P)[]\ T1/ptm/m/n/10 . Underfull \hbox (badness 1142) in paragraph at lines 5544--5549 []\T1/zi4/m/sl/10 expand(x)[["P"]] []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 expan d2(x)[["P1."]] []\T1/ptm/m/n/10 are iden-ti-cal mod-ulo []\T1/zi4/m/sl/10 Dimna mes[]\T1/ptm/m/n/10 . The [2403] [2404] [2405] [2406] [2407] [2408] Underfull \hbox (badness 1087) in paragraph at lines 5987--5993 []\T1/ptm/m/n/10 a string whose first three char-ac-ters spec-ify the class of the re-sult. It Underfull \hbox (badness 10000) in paragraph at lines 6000--6002 []\T1/ptm/m/n/10 a string in []\T1/zi4/m/sl/10 c("trace", "sumLog", "prod", "mi n", "max", "range", [2409] [2410] [2411] [2412] Underfull \hbox (badness 1931) in paragraph at lines 6262--6264 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/sl/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2413] [2414] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.image}) h as been already used, duplicate ignored \relax l.6399 \aliasA{image}{image-methods}{image} [2415] Underfull \hbox (badness 1005) in paragraph at lines 6476--6481 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/sl/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 6476--6481 \T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/sl/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is Underfull \hbox (badness 5862) in paragraph at lines 6495--6498 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/sl/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2416] Overfull \hbox (42.75635pt too wide) in paragraph at lines 6545--6545 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2417] [2418] [2419] [2420] Underfull \hbox (badness 1509) in paragraph at lines 6810--6812 []\T1/ptm/m/n/10 an in-te-ger off-set, in-di-cat-ing that the re-sult should be a per-mu-ta-tion of [2421] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.anyNA}) h as been already used, duplicate ignored \relax l.6888 \aliasA{anyNA}{is.na-methods}{anyNA} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.finite }) has been already used, duplicate ignored \relax l.6895 ...asA{is.finite}{is.na-methods}{is.finite} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.infini te}) has been already used, duplicate ignored \relax l.6903 ...is.infinite}{is.na-methods}{is.infinite} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.na}) h as been already used, duplicate ignored \relax l.6911 \aliasA{is.na}{is.na-methods}{is.na} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.nan}) has been already used, duplicate ignored \relax l.6918 \aliasA{is.nan}{is.na-methods}{is.nan} [2422] [2423] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.isSymmetr ic}) has been already used, duplicate ignored \relax l.7077 ...etric}{isSymmetric-methods}{isSymmetric} [2424] Overfull \hbox (26.39984pt too wide) in paragraph at lines 7124--7124 []\T1/zi4/m/sl/10 isSymmetric(object, checkDN = TRUE, tol = 100 * .Machine$dou ble.eps, tol1 = 8 * tol, ...)[] [2425] [2426] [2427] Underfull \vbox (badness 10000) has occurred while \output is active [2428] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.kronecker }) has been already used, duplicate ignored \relax l.7453 ...kronecker}{kronecker-methods}{kronecker} [2429] [2430] [2431 pdfTeX warning (ext4): destination with the same identifier (name{Rfn.*,ndiMatr ix,Matrix.Rdash.method}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.7725 \item[\code{Dim},\code{Dimnames}:] The dimension (a length-2] Underfull \hbox (badness 2478) in paragraph at lines 7736--7741 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/sl/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ sl/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 7744--7747 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2432] [2433] [2434] Underfull \hbox (badness 10000) in paragraph at lines 7968--7971 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2435] Underfull \hbox (badness 10000) in paragraph at lines 8029--8032 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2436] [2437] [2438] [2439] pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rpcent.* .Rpcent.}) has been already used, duplicate ignored \relax l.8310 ...*\%}{matmult-methods}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.crossprod }) has been already used, duplicate ignored \relax l.8384 ...A{crossprod}{matmult-methods}{crossprod} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.tcrosspro d}) has been already used, duplicate ignored \relax l.8460 ...tcrossprod}{matmult-methods}{tcrossprod} [2440] Underfull \hbox (badness 10000) in paragraph at lines 8618--8623 []\T1/zi4/m/sl/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 8618--8623 []\T1/zi4/m/sl/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 8627--8629 []\T1/zi4/m/sl/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/sl/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 8629--8631 []\T1/zi4/m/sl/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/sl/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2441] [2442] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.8856 \aliasA{det}{Matrix-class}{det} [2443] Underfull \hbox (badness 1527) in paragraph at lines 8933--8935 []\T1/zi4/m/sl/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/sl/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode Underfull \hbox (badness 4846) in paragraph at lines 8941--8944 []\T1/zi4/m/sl/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/sl/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 8946--8949 [2444] [2445] [2446] Underfull \hbox (badness 10000) in paragraph at lines 9148--9150 []\T1/zi4/m/sl/10 signature(x = "MatrixFactorization", logarithm = "missing")[] \T1/ptm/m/n/10 : sets Underfull \hbox (badness 10000) in paragraph at lines 9154--9156 []\T1/zi4/m/sl/10 signature(x = "MatrixFactorization", value = "NULL")[]\T1/ptm /m/n/10 : re-turns []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with Underfull \hbox (badness 10000) in paragraph at lines 9156--9158 []\T1/zi4/m/sl/10 signature(x = "MatrixFactorization", value = "list")[]\T1/ptm /m/n/10 : re-turns []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with [2447] Underfull \hbox (badness 10000) in paragraph at lines 9193--9196 []\T1/ptm/m/n/10 Generic func-tions [][][]\T1/zi4/m/sl/10 expand1[][][] []\T1/p tm/m/n/10 and [][][]\T1/zi4/m/sl/10 expand2[][][] []\T1/ptm/m/n/10 for con-stru ct-ing ma-trix fac-tors from [2448] Underfull \hbox (badness 10000) in paragraph at lines 9311--9313 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/sl/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/sl/10 X <- [2449] [2450] Underfull \vbox (badness 10000) has occurred while \output is active [2451] Underfull \hbox (badness 2478) in paragraph at lines 9507--9512 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/sl/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ sl/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 9515--9518 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2452] [2453] Underfull \hbox (badness 5924) in paragraph at lines 9696--9698 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2454] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.norm}) ha s been already used, duplicate ignored \relax l.9738 \aliasA{norm}{norm-methods}{norm} [2455] [2456] [2457] Underfull \hbox (badness 10000) in paragraph at lines 10031--10034 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2458] Underfull \hbox (badness 10000) in paragraph at lines 10095--10098 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2459] [2460] [2461] Underfull \hbox (badness 4242) in paragraph at lines 10295--10298 [][][]\T1/zi4/m/sl/10 pack[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 unp ack[][][][]\T1/ptm/m/n/10 ; its vir-tual "com-ple-ment" []\T1/zi4/m/sl/10 "[][] unpackedMatrix[][][]"[]\T1/ptm/m/n/10 ; its proper sub-classes [2462] Underfull \hbox (badness 3547) in paragraph at lines 10383--10386 []\T1/zi4/m/sl/10 signature(x = "pMatrix", y = "Matrix") []\T1/ptm/m/n/10 and o th-ers listed by []\T1/zi4/m/sl/10 showMethods("%*%", [2463] [2464] [2465] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.10601 \aliasA{qr}{qr-methods}{qr} [2466] [2467] [2468] [2469] Underfull \hbox (badness 7186) in paragraph at lines 10845--10851 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/sl/10 qr[][][](x, tol, [2470] [2471] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rcond}) h as been already used, duplicate ignored \relax l.11002 \aliasA{rcond}{rcond-methods}{rcond} [2472] [2473] [2474] [2475] Underfull \hbox (badness 2351) in paragraph at lines 11284--11292 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 11284--11292 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/sl/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/sl/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/sl/10 NULL[]\T1/ptm/m/n/10 --- [2476] [2477] Underfull \hbox (badness 10000) in paragraph at lines 11441--11444 []\T1/ptm/m/n/10 Class [][][]\T1/zi4/m/sl/10 SchurFactorization[][][][]\T1/ptm/ m/n/10 , di-rectly. Class [][][]\T1/zi4/m/sl/10 MatrixFactorization[][][][]\T1/ ptm/m/n/10 , by class [2478] [2479] [2480] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solve}) h as been already used, duplicate ignored \relax l.11630 \aliasA{solve}{solve-methods}{solve} [2481] Underfull \hbox (badness 5316) in paragraph at lines 11816--11821 []\T1/ptm/m/n/10 Methods for dense []\T1/zi4/m/sl/10 a []\T1/ptm/m/n/10 are bui lt on 14 LA-PACK rou-tines: class []\T1/zi4/m/sl/10 d..Matrix[]\T1/ptm/m/n/10 , where [2482] Underfull \hbox (badness 10000) in paragraph at lines 11916--11919 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame [2483] Underfull \hbox (badness 10000) in paragraph at lines 11952--11955 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 11963--11967 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2484] [2485] [2486] [2487] [2488] [2489] [2490] [2491] Underfull \hbox (badness 10000) in paragraph at lines 12500--12508 []\T1/zi4/m/sl/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 12500--12508 []\T1/zi4/m/sl/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/sl/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/sl/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 12525--12533 []\T1/zi4/m/sl/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 12525--12533 []\T1/zi4/m/sl/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2492] [2493] [2494] [2495] [2496] Underfull \hbox (badness 5036) in paragraph at lines 12918--12920 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2497] Underfull \hbox (badness 2828) in paragraph at lines 13084--13087 []\T1/zi4/m/sl/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 13106--13109 []\T1/zi4/m/sl/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/sl/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/sl/10 (x, times, [2498] [2499] [2500] [2501] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.[<.Rdash. }) has been already used, duplicate ignored \relax l.13311 ...\Rdash{}}{subassign-methods}{[<.Rdash.} Underfull \hbox (badness 6910) in paragraph at lines 13398--13400 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2502] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.[}) has b een already used, duplicate ignored \relax l.13445 \aliasA{[}{subscript-methods}{[} [2503] [2504] Underfull \hbox (badness 2057) in paragraph at lines 13656--13658 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., Underfull \hbox (badness 10000) in paragraph at lines 13670--13675 []\T1/zi4/m/sl/10 skewpart(x) []\T1/ptm/m/n/10 re-turns a skew-symmetric ma-tri x, in-her-it-ing from [][][]\T1/zi4/m/sl/10 generalMatrix[][][][]\T1/ptm/m/n/10 , [2505] [2506] Underfull \hbox (badness 10000) in paragraph at lines 13826--13831 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/sl/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/sl/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 13832--13838 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/sl/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 crossprod []\T1/ptm/m /n/10 are de-fined [2507] [2508] [2509] Overfull \hbox (21.75807pt too wide) in paragraph at lines 14021--14027 []\T1/ptm/m/n/10 GAL lat-tice file `\T1/zi4/m/sl/10 usc_q.GAL\T1/ptm/m/n/10 ' ( re-trieved in 2008 from `\T1/zi4/m/sl/10 http://sal.uiuc.edu/weights/zips/usc.z ip\T1/ptm/m/n/10 ' [2510] [2511] [2512]) (./boot-pkg.tex Chapter 18. [2513] [2514] [2515] [2516] [2517] [2518] [2519] [2520] [2521] [2522] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2523] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2524] Underfull \vbox (badness 10000) has occurred while \output is active [2525] [2526] [2527] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2528] [2529] [2530] [2531] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2532] [2533] [2534] [2535] [2536] [2537] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/sl/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2538] [2539] Underfull \vbox (badness 10000) has occurred while \output is active [2540] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2541] [2542] [2543] [2544] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2545] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2546] [2547] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /sl/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/sl/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/sl/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/sl/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2548] [2549] [2550] [2551] [2552] [2553] [2554] [2555] [2556] [2557] [2558] [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] [2569] [2570] [2571] [2572] [2573] [2574] [2575] [2576] [2577] [2578] [2579] [2580] [2581] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2582] [2583] [2584] [2585] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2586] [2587] [2588] [2589] [2590] [2591] [2592] [2593] [2594] [2595] [2596] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/sl/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2597] [2598] [2599] [2600] [2601] [2602] [2603] [2604] [2605] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2606] [2607] [2608] [2609] [2610] [2611] [2612] [2613] [2614] [2615]) (./class-pkg.tex [2616] Chapter 19. [2617] [2618] [2619] [2620] [2621] [2622] [2623] [2624] [2625] [2626] [2627] [2628] [2629] [2630] [2631] [2632]) (./cluster-pkg.tex Chapter 20. [2633] [2634] [2635] [2636] [2637] [2638] [2639] [2640] [2641] [2642] [2643] [2644] Underfull \hbox (badness 1412) in paragraph at lines 782--787 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/sl/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/sl/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2645] Underfull \hbox (badness 10000) in paragraph at lines 882--884 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2646] [2647] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2648] [2649] [2650] [2651] [2652] [2653] Underfull \hbox (badness 10000) in paragraph at lines 1474--1477 [2654] [2655] Underfull \hbox (badness 2503) in paragraph at lines 1583--1586 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/sl/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2656] Underfull \hbox (badness 4954) in paragraph at lines 1680--1682 []\T1/ptm/b/n/10 A\T1/ptm/m/n/10 symmetric bi-nary vari-able, aka []\T1/zi4/m/s l/10 "A" []\T1/ptm/m/n/10 in re-sult []\T1/zi4/m/sl/10 Types[]\T1/ptm/m/n/10 , see [2657] Underfull \hbox (badness 7667) in paragraph at lines 1694--1698 []\T1/ptm/b/n/10 I\T1/ptm/m/n/10 nterval scaled -- the \T1/ptm/b/n/10 de-fault \T1/ptm/m/n/10 for all nu-meric Underfull \hbox (badness 10000) in paragraph at lines 1694--1698 \T1/ptm/m/n/10 (incl []\T1/zi4/m/sl/10 integer[]\T1/ptm/m/n/10 ) columns of []\ T1/zi4/m/sl/10 x[]\T1/ptm/m/n/10 , aka []\T1/zi4/m/sl/10 "I" []\T1/ptm/m/n/10 i n re-sult []\T1/zi4/m/sl/10 Types[]\T1/ptm/m/n/10 , see [2658] [2659] Overfull \hbox (5.24408pt too wide) in paragraph at lines 1866--1866 []\T1/zi4/m/n/9 summary(dA123 <- daisy(flowerN)) # .. all 3 logicals treated * A*symmetric binary (w/ warning)[] Overfull \hbox (11.23795pt too wide) in paragraph at lines 1877--1877 []\T1/zi4/m/n/9 ## Still, using Euclidean/Manhattan distance for {0-1} *is* id entical to treating them as "N" :[] [2660] [2661] [2662] [2663] [2664] Underfull \hbox (badness 10000) in paragraph at lines 2212--2215 Underfull \hbox (badness 10000) in paragraph at lines 2223--2229 [][][]\T1/zi4/m/sl/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/sl/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/s l/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2665] [2666] [2667] [2668] Underfull \hbox (badness 6675) in paragraph at lines 2457--2459 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2669] [2670] [2671] [2672] [2673] [2674] [2675] [2676] Underfull \hbox (badness 2980) in paragraph at lines 3059--3063 [][][]\T1/zi4/m/sl/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/sl/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 partition.object[][][][]\T1/ptm/m/n/10 , [2677] [2678] [2679] [2680] [2681] [2682] Underfull \hbox (badness 1142) in paragraph at lines 3398--3401 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/sl/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2683] Underfull \hbox (badness 1142) in paragraph at lines 3517--3520 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/sl/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2684] [2685] [2686] [2687] Underfull \hbox (badness 2582) in paragraph at lines 3740--3745 [][][]\T1/zi4/m/sl/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/sl/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl /10 clara[][][][]\T1/ptm/m/n/10 , [2688] Underfull \hbox (badness 2698) in paragraph at lines 3802--3807 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/sl/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3802--3807 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/sl/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/sl/10 x x <- [2689] Underfull \hbox (badness 10000) in paragraph at lines 3875--3877 []\T1/ptm/m/n/10 Available as `\T1/zi4/m/sl/10 pluton.dat\T1/ptm/m/n/10 ' from the archive of the Uni-ver-sity of Antwer-pen, [2690] [2691] [2692] Underfull \hbox (badness 10000) in paragraph at lines 4089--4091 []\T1/ptm/m/n/10 a []\T1/zi4/m/sl/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/sl/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2693] [2694] [2695] [2696] Underfull \hbox (badness 2626) in paragraph at lines 4318--4323 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/sl/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/sl/10 col = [2697] Underfull \hbox (badness 1383) in paragraph at lines 4395--4400 []\T1/ptm/m/n/10 While []\T1/zi4/m/sl/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/sl/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2698] [2699] [2700] [2701] [2702] [2703] [2704] [2705] Underfull \hbox (badness 10000) in paragraph at lines 4836--4838 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/sl/10 xclara.dat\T1/ptm/m/n/10 ' in side [2706] [2707]) (./codetools-pkg.tex [2708] Chapter 21. [2709] [2710] [2711] [2712] [2713]) (./foreign-pkg.tex [2714] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/sl/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/sl/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/sl/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2715] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/sl/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2716] [2717] [2718] [2719] [2720] [2721] [2722] Underfull \hbox (badness 2846) in paragraph at lines 502--511 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 502--511 \T1/ptm/m/n/10 els. For []\T1/zi4/m/sl/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 502--511 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/sl/10 paste0(label, [2723] Overfull \hbox (6.73795pt too wide) in paragraph at lines 620--620 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2724] [2725] [2726] Underfull \hbox (badness 10000) in paragraph at lines 808--809 [2727] Underfull \hbox (badness 10000) in paragraph at lines 865--869 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 865--869 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/sl/10 https : Underfull \hbox (badness 10000) in paragraph at lines 865--869 \T1/zi4/m/sl/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 865--869 \T1/zi4/m/sl/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2728] [2729] Underfull \hbox (badness 10000) in paragraph at lines 986--988 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/sl/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2730] [2731] [2732] [2733] Underfull \hbox (badness 10000) in paragraph at lines 1265--1271 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/sl/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2734] [2735]) (./lattice-pkg.tex [2736] Chapter 23. [2737] Underfull \hbox (badness 1484) in paragraph at lines 114--118 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 114--118 \T1/zi4/m/sl/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2738] [2739] [2740] Underfull \vbox (badness 10000) has occurred while \output is active [2741] [2742] [2743] [2744] [2745] [2746] [2747] [2748] [2749] [2750] [2751] [2752] [2753] Underfull \hbox (badness 1062) in paragraph at lines 1395--1399 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2754] Underfull \vbox (badness 4805) has occurred while \output is active [2755] Underfull \hbox (badness 1803) in paragraph at lines 1563--1580 [][][]\T1/zi4/m/sl/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/sl/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1563--1580 [][][]\T1/zi4/m/sl/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/sl/10 strip.default[][][][]\T1/ptm/m/n/10 , [2756] [2757] Underfull \hbox (badness 3009) in paragraph at lines 1705--1707 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/sl/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1735--1739 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2758] [2759] [2760] [2761] [2762] [2763] Underfull \hbox (badness 10000) in paragraph at lines 2137--2140 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2764] [2765] [2766] [2767] [2768] [2769] [2770] [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] [2773] Underfull \hbox (badness 2781) in paragraph at lines 2871--2873 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/sl/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2774] Underfull \hbox (badness 2486) in paragraph at lines 3021--3025 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2775] [2776] [2777] [2778] [2779] [2780] [2781] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.parallel} ) has been already used, duplicate ignored \relax l.3506 \aliasA{parallel}{B\_08\_splom}{parallel} [2782] [2783] Underfull \hbox (badness 2368) in paragraph at lines 3644--3644 []\T1/zi4/m/sl/10 auto.key[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 prepanel[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 scales[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 strip[] \T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 groups[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 x lab[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 xlim[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/1 0 ylab[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 ylim[]\T1/ptm/m/n/10 , [2784] [2785] [2786] [2787] [2788] Underfull \hbox (badness 5696) in paragraph at lines 3992--3996 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3992--3996 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/sl/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3992--3996 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2789] [2790] [2791] Underfull \hbox (badness 1389) in paragraph at lines 4175--4183 \T1/ptm/m/n/10 based on HCL palettes, but cus-tomiza-tion of the palettes is al -lowed. Ear-lier be-haviour [2792] Underfull \hbox (badness 1173) in paragraph at lines 4251--4255 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in Underfull \hbox (badness 3219) in paragraph at lines 4278--4280 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2793] [2794] [2795] Underfull \hbox (badness 3492) in paragraph at lines 4478--4488 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/sl/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/sl/10 "plot.symbol"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4503--4506 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/sl/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4506--4508 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/sl/10 plot.polygon []\T1/ptm/m/n/10 and [2796] [2797] [2798] [2799] [2800] [2801] [2802] Underfull \vbox (badness 10000) has occurred while \output is active [2803] [2804] [2805] Underfull \hbox (badness 6157) in paragraph at lines 5232--5235 []\T1/zi4/m/sl/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/sl/10 print.shingle []\T1/ptm/m/n/10 and [2806] [2807] [2808] [2809] [2810] [2811] [2812] Underfull \hbox (badness 10000) in paragraph at lines 5684--5687 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5684--5687 []\T1/zi4/m/sl/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2813] [2814] [2815] [2816] [2817] Underfull \hbox (badness 4805) in paragraph at lines 6045--6049 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 6056--6063 []\T1/ptm/m/n/10 For []\T1/zi4/m/sl/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 6056--6063 []\T1/zi4/m/sl/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/sl/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 6056--6063 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/sl/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 6056--6063 []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 6056--6063 [][][]\T1/zi4/m/sl/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2818] [2819] [2820] [2821] Underfull \hbox (badness 4242) in paragraph at lines 6356--6361 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6356--6361 \T1/ptm/m/n/10 ter []\T1/zi4/m/sl/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2822] [2823] Underfull \hbox (badness 2310) in paragraph at lines 6472--6477 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/sl/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/sl/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2824] [2825] [2826] [2827] [2828] [2829] [2830] [2831] [2832] [2833] [2834] [2835] Underfull \hbox (badness 3168) in paragraph at lines 7330--7334 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2836] [2837] [2838] [2839] Underfull \hbox (badness 2012) in paragraph at lines 7601--7604 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2840] [2841] [2842] Underfull \hbox (badness 3333) in paragraph at lines 7808--7810 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/sl/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 plot.line []\T1/ptm/m/n/10 us-ing Underfull \hbox (badness 2318) in paragraph at lines 7836--7844 []\T1/zi4/m/sl/10 "spline" []\T1/ptm/m/n/10 adds a cu-bic smooth-ing spline fit (same as [][][]\T1/zi4/m/sl/10 panel.spline[][][][]\T1/ptm/m/n/10 ). [2843] [2844] [2845] [2846] [2847] [2848] [2849] Underfull \hbox (badness 1436) in paragraph at lines 8309--8315 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2850] [2851] [2852] [2853] [2854] [2855] [2856] [2857] Underfull \hbox (badness 10000) in paragraph at lines 8878--8881 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/sl/10 panel.supe rpose []\T1/ptm/m/n/10 from Underfull \hbox (badness 1092) in paragraph at lines 8924--8926 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/sl/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/sl/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2858] [2859] [2860] Underfull \hbox (badness 3895) in paragraph at lines 9085--9088 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/sl/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in Underfull \hbox (badness 6625) in paragraph at lines 9095--9095 []\T1/zi4/m/sl/10 perspective[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 distance[]\T1 /ptm/m/n/10 , []\T1/zi4/m/sl/10 xlim[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 ylim[] \T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 zlim[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 scr een[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 R.mat[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/ 10 aspect[]\T1/ptm/m/n/10 , [2861] Underfull \hbox (badness 1515) in paragraph at lines 9160--9164 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2862] Underfull \hbox (badness 6316) in paragraph at lines 9266--9271 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in [2863] Underfull \hbox (badness 5908) in paragraph at lines 9283--9286 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/sl/10 xscale .components.default []\T1/ptm/m/n/10 and [2864] [2865] [2866] [2867] Underfull \hbox (badness 2418) in paragraph at lines 9574--9578 []\T1/ptm/m/n/10 returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/sl/10 left, right, left.name, right.name, [2868] [2869] [2870] [2871] [2872] [2873] [2874] Underfull \hbox (badness 2310) in paragraph at lines 10018--10022 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/sl/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/s l/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 10023--10026 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/sl/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/sl/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Morris"[]\T1/ptm/m/n/10 , [2875] [2876] [2877] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma} ) has been already used, duplicate ignored \relax l.10249 \aliasA{melanoma}{H\_melanoma}{melanoma} [2878] [2879] [2880] Underfull \hbox (badness 4144) in paragraph at lines 10473--10476 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10473--10476 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/sl /10 https : / / ruralhealth . und . edu / projects / [2881] [2882]) (./mgcv-pkg.tex Chapter 24. [2883] [2884] [2885] Underfull \hbox (badness 1142) in paragraph at lines 185--189 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 210--215 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2886] [2887] [2888] [2889] Underfull \hbox (badness 10000) in paragraph at lines 379--386 [][][]\T1/zi4/m/sl/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/sl/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 379--386 [][][]\T1/zi4/m/sl/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/sl/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/sl/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/sl/10 gam.side[][][][]\T1/ptm/m/n/10 , [2890] [2891] [2892] [2893] [2894] [2895] Underfull \hbox (badness 1406) in paragraph at lines 704--705 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2896] [2897] Underfull \hbox (badness 1158) in paragraph at lines 814--816 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion [2898] Underfull \hbox (badness 1259) in paragraph at lines 877--878 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2899] Underfull \vbox (badness 10000) has occurred while \output is active [2900] [2901] [2902] [2903] [2904] [2905] Underfull \hbox (badness 1281) in paragraph at lines 1272--1273 []\T1/zi4/m/sl/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/sl/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/sl/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/sl/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2906] [2907] Underfull \vbox (badness 10000) has occurred while \output is active [2908] Underfull \vbox (badness 10000) has occurred while \output is active [2909] [2910] Underfull \vbox (badness 10000) has occurred while \output is active [2911] [2912] [2913] [2914] [2915] [2916] [2917] [2918] [2919] [2920] [2921] [2922] [2923] [2924] [2925] [2926] [2927] [2928] Underfull \hbox (badness 1142) in paragraph at lines 2604--2608 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2929] Underfull \hbox (badness 1043) in paragraph at lines 2630--2636 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2930] [2931] [2932] [2933] [2934] [2935] Underfull \vbox (badness 10000) has occurred while \output is active [2936] Underfull \vbox (badness 10000) has occurred while \output is active [2937] [2938] [2939] [2940] [2941] [2942] [2943] [2944] [2945] [2946] [2947] [2948] [2949] [2950] [2951] [2952] [2953] Underfull \hbox (badness 10000) in paragraph at lines 4071--4075 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/sl/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/sl/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2954] [2955] Underfull \vbox (badness 10000) has occurred while \output is active [2956] [2957] [2958] Underfull \hbox (badness 1184) in paragraph at lines 4358--4362 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2959] [2960] [2961] [2962] [2963] [2964] [2965] [2966] [2967] [2968] [2969] [2970] Underfull \hbox (badness 1142) in paragraph at lines 5081--5085 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2971] Underfull \hbox (badness 1231) in paragraph at lines 5185--5187 []\T1/zi4/m/sl/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/sl/10 gam []\T1/ptm/m/n/10 wit h [2972] [2973] [2974] Underfull \vbox (badness 10000) has occurred while \output is active [2975] [2976] [2977] [2978] Underfull \hbox (badness 2181) in paragraph at lines 5626--5627 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2979] [2980] [2981] [2982] [2983] [2984] [2985] [2986] [2987] Underfull \hbox (badness 10000) in paragraph at lines 6130--6131 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/sl/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2988] [2989] [2990] [2991] [2992] [2993] [2994] [2995] [2996] [2997] [2998] Underfull \hbox (badness 1142) in paragraph at lines 6715--6719 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2999] [3000] [3001] Underfull \vbox (badness 10000) has occurred while \output is active [3002] [3003] [3004] [3005] Underfull \hbox (badness 1087) in paragraph at lines 7087--7088 []\T1/ptm/m/n/10 If []\T1/zi4/m/sl/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [3006] [3007] [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] Underfull \vbox (badness 10000) has occurred while \output is active [3010] [3011] [3012] [3013] [3014] [3015] [3016] [3017] [3018] [3019] [3020] [3021] Underfull \hbox (badness 1242) in paragraph at lines 8046--8047 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [3022] Underfull \hbox (badness 1122) in paragraph at lines 8072--8073 []\T1/ptm/m/n/10 When us-ing [][][]\T1/zi4/m/sl/10 NCV[][][] []\T1/ptm/m/n/10 w ith [][][]\T1/zi4/m/sl/10 gam[][][] []\T1/ptm/m/n/10 worth-while per-for-mance im-prove-ments are avail-able by set-ting [3023] [3024] [3025] [3026] [3027] [3028] [3029] [3030] [3031] [3032] [3033] [3034] [3035] Underfull \hbox (badness 6001) in paragraph at lines 8785--8787 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/sl/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [3036] [3037] [3038] [3039] [3040] [3041] [3042] [3043] [3044] [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] [3047] Underfull \hbox (badness 1038) in paragraph at lines 9533--9536 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/sl/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9533--9536 []\T1/zi4/m/sl/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [3048] Underfull \hbox (badness 10000) in paragraph at lines 9589--9592 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/sl/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/sl/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [3049] [3050] [3051] [3052] [3053] [3054] [3055] [3056] [3057] [3058] [3059] Underfull \hbox (badness 1852) in paragraph at lines 10261--10264 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/sl/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/sl/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/sl/10 "para.only" []\T1/ptm/m/n/10 and [3060] [3061] [3062] Underfull \hbox (badness 1852) in paragraph at lines 10430--10433 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/sl/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/sl/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/sl/10 "para.only" []\T1/ptm/m/n/10 and [3063] [3064] Underfull \vbox (badness 10000) has occurred while \output is active [3065] [3066] Underfull \hbox (badness 1205) in paragraph at lines 10670--10671 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10670--10671 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10676--10681 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3067] Underfull \hbox (badness 1205) in paragraph at lines 10760--10761 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10760--10761 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [3068] [3069] [3070] Underfull \hbox (badness 1253) in paragraph at lines 10959--10961 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [3071] [3072] [3073] [3074] [3075] [3076] Underfull \hbox (badness 4792) in paragraph at lines 11220--11223 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/s l/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/sl/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 11220--11223 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/sl/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [3077] Underfull \hbox (badness 10000) in paragraph at lines 11327--11330 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/sl /10 "deviance"[]\T1/ptm/m/n/10 , [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090] [3091] Underfull \hbox (badness 3861) in paragraph at lines 12118--12121 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3092] [3093] Underfull \hbox (badness 1320) in paragraph at lines 12233--12238 \T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/sl/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3094] Underfull \hbox (badness 1975) in paragraph at lines 12339--12344 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3095] [3096] Underfull \hbox (badness 1762) in paragraph at lines 12428--12440 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/sl/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/sl/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3097] [3098] [3099] Underfull \hbox (badness 7667) in paragraph at lines 12640--12646 [][][]\T1/zi4/m/sl/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3100] Underfull \hbox (badness 10000) in paragraph at lines 12681--12682 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3101] [3102] [3103] [3104] Underfull \vbox (badness 10000) has occurred while \output is active [3105] Underfull \hbox (badness 10000) in paragraph at lines 12958--12960 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3106] [3107] Underfull \hbox (badness 10000) in paragraph at lines 13088--13089 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3108] [3109] [3110] Underfull \hbox (badness 1436) in paragraph at lines 13224--13231 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/sl/10 gamm []\T1/ptm/m/n/10 only al-lows one [3111] [3112] Underfull \hbox (badness 10000) in paragraph at lines 13323--13324 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] Underfull \hbox (badness 10000) in paragraph at lines 13924--13930 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13924--13930 []\T1/zi4/m/sl/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/sl/10 gam []\T1/ptm/m/n/10 for-mula. Note [3123] [3124] [3125] Underfull \vbox (badness 10000) has occurred while \output is active [3126] Underfull \vbox (badness 10000) has occurred while \output is active [3127] [3128] Underfull \hbox (badness 10000) in paragraph at lines 14268--14269 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3129] [3130] [3131] [3132] Overfull \hbox (35.26862pt too wide) in paragraph at lines 14480--14480 []\T1/zi4/m/n/9 b <- gam(y ~ s(x)+s(f1,x,bs="sz")+s(f2,x,bs="sz")+s(f1,f2,x,bs ="sz",id=1),data=dat,method="REML")[] [3133] [3134] Underfull \hbox (badness 3895) in paragraph at lines 14626--14629 [][][]\T1/zi4/m/sl/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3135] Underfull \hbox (badness 10000) in paragraph at lines 14671--14673 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3136] [3137] [3138] [3139] [3140] Underfull \hbox (badness 1371) in paragraph at lines 14951--14957 []\T1/zi4/m/sl/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14962--14964 []\T1/zi4/m/sl/10 bs="fs" []\T1/ptm/m/n/10 A spe-cial smoother class (see Underfull \hbox (badness 1132) in paragraph at lines 14962--14964 [][][]\T1/zi4/m/sl/10 smooth.construct.fs.smooth.spec[][][][]\T1/ptm/m/n/10 ) i s avail-able for the case in which a smooth is [3141] Underfull \hbox (badness 6461) in paragraph at lines 14996--15000 [][][]\T1/zi4/m/sl/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 t2[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 tprs[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Duchon.spline[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 cubic.regression.spline[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/sl/10 p.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4 /m/sl/10 d.spline[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14996--15000 [][][]\T1/zi4/m/sl/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14996--15000 [][][]\T1/zi4/m/sl/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/sl/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 , [3142] [3143] [3144] [3145] Underfull \hbox (badness 2326) in paragraph at lines 15200--15207 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/sl/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3146] Underfull \hbox (badness 2158) in paragraph at lines 15285--15285 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3147] [3148] [3149] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] Underfull \vbox (badness 10000) has occurred while \output is active [3158] [3159] [3160] [3161] [3162] [3163] [3164] [3165] [3166] [3167] [3168] [3169] [3170] [3171] Overfull \hbox (21.42029pt too wide) in paragraph at lines 16847--16847 []\T1/zi4/m/sl/10 vcov(object, sandwich=FALSE, freq = FALSE, dispersion = NULL ,unconditional=FALSE, ...)[] [3172] [3173] [3174] Underfull \hbox (badness 1796) in paragraph at lines 16960--16963 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/sl/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/sl/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3175] [3176] [3177] [3178] [3179] [3180] [3181] [3182] [3183]) (./nlme-pkg.tex [3184] Chapter 25. [3185] [3186] [3187] [3188] [3189] [3190] [3191] [3192] [3193] [3194] [3195] [3196] [3197] [3198] [3199] [3200] [3201] [3202] [3203] [3204] [3205] [3206] [3207] [3208] [3209] [3210] [3211] [3212] [3213] [3214] [3215] [3216] [3217] [3218] Underfull \hbox (badness 10000) in paragraph at lines 2252--2258 [][][]\T1/zi4/m/sl/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/sl/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3219] [3220] [3221] [3222] [3223] [3224] [3225] [3226] [3227] [3228] [3229] [3230] [3231] [3232] [3233 pdfTeX warning (ext4): destination with the same identifier (name{Rfn.corMatrix .corCompSymm}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.3186 ] [3234] [3235] [3236] [3237] [3238] [3239] [3240] [3241] [3242] [3243] [3244] [3245] [3246] [3247] [3248] [3249] [3250] [3251] Underfull \hbox (badness 1067) in paragraph at lines 4411--4416 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/sl/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/sl/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3252] [3253] [3254] [3255] [3256] [3257] [3258] [3259] [3260] [3261] [3262] [3263] Underfull \hbox (badness 10000) in paragraph at lines 5157--5161 [][][]\T1/zi4/m/sl/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/sl/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3264] [3265] [3266] [3267] [3268] [3269] [3270] Underfull \hbox (badness 10000) in paragraph at lines 5591--5594 [][][]\T1/zi4/m/sl/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3271] [3272] [3273] [3274] [3275] [3276] [3277] Underfull \hbox (badness 10000) in paragraph at lines 5972--5977 [][][]\T1/zi4/m/sl/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3278] [3279] [3280] [3281] Underfull \hbox (badness 1490) in paragraph at lines 6247--6258 [][][]\T1/zi4/m/sl/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/sl/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3282] Underfull \hbox (badness 10000) in paragraph at lines 6311--6313 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3283] [3284] [3285] [3286] [3287] [3288] Underfull \hbox (badness 10000) in paragraph at lines 6720--6722 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3289] [3290] [3291] [3292] Underfull \hbox (badness 10000) in paragraph at lines 6989--6996 [][][]\T1/zi4/m/sl/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/sl/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3293] [3294] [3295] [3296] Underfull \hbox (badness 10000) in paragraph at lines 7249--7254 [][][]\T1/zi4/m/sl/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] [3308] [3309] [3310] [3311] [3312] [3313] [3314] [3315] Underfull \hbox (badness 10000) in paragraph at lines 8531--8533 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3316] [3317] [3318] [3319] [3320] Underfull \hbox (badness 10000) in paragraph at lines 8816--8823 [][][]\T1/zi4/m/sl/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3321] [3322] [3323] [3324] [3325] [3326] [3327] [3328] Underfull \hbox (badness 10000) in paragraph at lines 9337--9344 [][][]\T1/zi4/m/sl/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/sl/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/sl/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3329] [3330] [3331] [3332] [3333] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9699 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix.1} ) has been already used, duplicate ignored \relax l.9699 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3334] [3335] [3336] [3337] [3338] [3339] [3340] [3341] [3342] [3343] [3344] [3345] Underfull \hbox (badness 1596) in paragraph at lines 10476--10502 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3346] [3347] Underfull \hbox (badness 1490) in paragraph at lines 10592--10598 [][][]\T1/zi4/m/sl/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/sl/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 reStruct[][][][]\T1/ptm/m/n/10 , [3348] [3349] [3350] Underfull \hbox (badness 10000) in paragraph at lines 10833--10835 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3351] [3352] [3353] [3354] [3355] [3356] [3357] [3358] [3359] [3360] [3361] [3362] [3363] [3364] [3365] [3366] [3367] [3368] [3369] [3370] [3371] [3372] [3373] [3374] [3375] [3376] [3377] [3378] [3379] [3380] [3381] [3382] [3383] [3384] [3385] [3386] [3387] [3388] [3389] [3390] [3391] [3392] [3393] Underfull \hbox (badness 1286) in paragraph at lines 13736--13743 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ sl/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/sl/10 inner []\T1/ptm/m/n/1 0 or [3394] [3395] [3396] [3397] [3398] [3399] [3400] [3401] [3402] [3403] [3404] [3405] [3406] [3407] [3408] [3409] [3410] [3411] [3412] [3413] [3414] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects}) has been already used, duplicate ignored \relax l.15179 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects.1}) has been already used, duplicate ignored \relax l.15179 ...Extract Random Effects}{random.effects} [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] [3423] [3424] [3425] [3426] Underfull \hbox (badness 1067) in paragraph at lines 15932--15937 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/sl/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/sl/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3427] [3428] [3429] [3430] Underfull \hbox (badness 1448) in paragraph at lines 16175--16184 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/sl/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3431] [3432] [3433] [3434] [3435] [3436] [3437] [3438] [3439] [3440] Underfull \hbox (badness 1728) in paragraph at lines 16878--16881 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3441] [3442] [3443] [3444] Underfull \hbox (badness 8056) in paragraph at lines 17212--17221 \T1/zi4/m/sl/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17212--17221 \T1/zi4/m/sl/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17212--17221 \T1/zi4/m/sl/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3445] [3446] [3447] [3448] [3449] Underfull \hbox (badness 10000) in paragraph at lines 17534--17542 [][][]\T1/zi4/m/sl/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varPower[][][][]\T1/ptm/m/n/10 , [3450] [3451] [3452] [3453] [3454] [3455] [3456] [3457] [3458] [3459] [3460] Underfull \hbox (badness 10000) in paragraph at lines 18244--18254 [][][]\T1/zi4/m/sl/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18244--18254 [][][]\T1/zi4/m/sl/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3461] [3462] [3463] [3464] [3465] Underfull \hbox (badness 5036) in paragraph at lines 18568--18577 [][][]\T1/zi4/m/sl/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3466] [3467] [3468] [3469] [3470] [3471] [3472] [3473] [3474] [3475] [3476] [3477] [3478]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom. 1}) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3479] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [3480] [3481] [3482] [3483] [3484] [3485] [3486]) (./rpart-pkg.tex Chapter 27. [3487] [3488] [3489] [3490] [3491] [3492] [3493] [3494] [3495] [3496] Underfull \hbox (badness 10000) in paragraph at lines 771--775 []\T1/ptm/m/n/10 Logical. If []\T1/zi4/m/sl/10 TRUE []\T1/ptm/m/n/10 (de-fault) , adds to the la-bel Underfull \hbox (badness 1348) in paragraph at lines 771--775 \T1/zi4/m/sl/10 #events level1/ #events level2/ \T1/ptm/m/n/10 etc. for method []\T1/zi4/m/sl/10 class[]\T1/ptm/m/n/10 , \T1/zi4/m/sl/10 n \T1/ptm/m/n/10 for [3497] [3498] [3499] [3500] [3501] [3502] [3503] [3504] [3505] [3506] [3507] [3508] [3509] [3510] [3511] [3512] [3513] [3514] [3515]) (./spatial-pkg.tex [3516] Chapter 28. [3517] [3518] [3519] [3520] [3521] [3522] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3523] [3524] [3525] [3526] [3527] [3528] [3529] [3530] [3531] [3532] [3533] [3534] [3535]) (./survival-pkg.tex [3536] Chapter 29. [3537] [3538] [3539] [3540] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3541] [3542] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml.1}) h as been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3543] [3544] [3545] [3546] [3547] [3548] [3549] [3550] [3551] [3552] [3553] [3554] Underfull \hbox (badness 1097) in paragraph at lines 1205--1207 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3555] [3556] [3557] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) h as been already used, duplicate ignored \relax l.1407 ...erapy for Stage B/C colon cancer}{colon} [3558] Underfull \hbox (badness 3679) in paragraph at lines 1455--1459 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/sl/10 table(colon$nodes, [3559] [3560] [3561] [3562] [3563] [3564] [3565] [3566] [3567] [3568] Underfull \hbox (badness 3250) in paragraph at lines 2143--2158 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/sl/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 2143--2158 []\T1/zi4/m/sl/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3569] [3570] [3571] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] Underfull \hbox (badness 1389) in paragraph at lines 3663--3665 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3591] [3592] [3593] [3594] Overfull \hbox (467.89665pt too wide) in alignment at lines 3949--3949 [] [] [3595] [3596] [3597] [3598] [3599] [3600] [3601] [3602] [3603] [3604] [3605] [3606] [3607] [3608] [3609] [3610] [3611] [3612] [3613] [3614] [3615] [3616] [3617] [3618] [3619] [3620] Underfull \hbox (badness 5274) in paragraph at lines 5718--5720 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/sl/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3621] [3622] [3623] [3624] [3625] [3626] [3627] [3628] [3629] [3630] [3631] [3632] [3633] [3634] [3635] [3636] [3637] [3638] Underfull \hbox (badness 1281) in paragraph at lines 6986--6989 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/sl/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "dfbeta"[]\T1/ptm/m/n/10 , [3639] [3640] [3641] [3642] [3643] [3644] [3645] [3646] [3647] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solder}) has been already used, duplicate ignored \relax l.7569 ...ata from a soldering experiment}{solder} [3648] [3649] [3650] [3651] [3652] [3653] [3654] [3655] [3656] [3657] [3658] [3659] [3660] [3661] [3662] [3663] [3664] [3665] [3666] [3667] [3668] [3669] [3670] Underfull \hbox (badness 1038) in paragraph at lines 9202--9208 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3671] [3672] [3673] [3674] [3675] Underfull \hbox (badness 10000) in paragraph at lines 9560--9565 [][][]\T1/zi4/m/sl/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3676] [3677] [3678] [3679] [3680] Underfull \hbox (badness 4441) in paragraph at lines 9950--9960 []\T1/ptm/m/n/10 by de-fault, the surv-fit rou-tines only re-turn in-for-ma-tio n at the [3681] [3682] Underfull \hbox (badness 1490) in paragraph at lines 10125--10134 [][][]\T1/zi4/m/sl/10 survfit.coxph[][][] []\T1/ptm/m/n/10 for sur-vival curves from Cox mod-els, [][][]\T1/zi4/m/sl/10 survfit.object[][][] []\T1/ptm/m/n/10 for a de-scrip-tion Underfull \hbox (badness 2213) in paragraph at lines 10125--10134 \T1/ptm/m/n/10 of the com-po-nents of a surv-fit ob-ject, [][][]\T1/zi4/m/sl/10 print.survfit[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.survfit[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 lines.survfit[][][][]\T1/ptm/m/n/10 , [3683] [3684] [3685] [3686] [3687] [3688] [3689] Underfull \hbox (badness 1354) in paragraph at lines 10623--10627 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. It gives th e time range [3690] [3691] [3692] [3693] [3694] [3695] [3696] [3697] [3698] [3699] [3700] [3701] [3702] [3703] [3704] [3705] [3706] [3707] [3708] [3709] [3710] [3711] [3712] [3713]) [3714] No file fullrefman.ind. (./fullrefman.aux) LaTeX Font Warning: Some font shapes were not available, defaults substituted. Package rerunfilecheck Warning: File `fullrefman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) pdfTeX warning (dest): name{Rfn.tree} has been referenced but does not exist, r eplaced by a fixed one pdfTeX warning (dest): name{Rfn.memory.limit} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.viewports} has been referenced but does not exi st, replaced by a fixed one pdfTeX warning (dest): name{Rfn.xyplot.zoo} has been referenced but does not ex ist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.ellipsePoints} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.ellipse} has been referenced but does not exist , replaced by a fixed one pdfTeX warning (dest): name{Rfn.cluster.stats} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.chorizon} has been referenced but does not exis t, replaced by a 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[3] [4] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . 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This reads the Underfull \hbox (badness 2261) in paragraph at lines 7741--7746 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [113] [114] [115] Underfull \vbox (badness 10000) has occurred while \output is active [116] [117] [118] [119] [120] [121] [122] [123] Underfull \hbox (badness 2096) in paragraph at lines 8474--8478 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . 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First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9327--9339 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] Underfull \hbox (badness 1178) in paragraph at lines 10193--10197 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] Underfull \hbox (badness 2744) in paragraph at lines 12533--12535 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [181] [182] [183] [184] [185] [186] [187] Underfull \vbox (badness 10000) has occurred while \output is active [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] Underfull \hbox (badness 2253) in paragraph at lines 14737--14739 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see Underfull \hbox (badness 1490) in paragraph at lines 14772--14775 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [211] Underfull \hbox (badness 1565) in paragraph at lines 14854--14858 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [212] Underfull \hbox (badness 4927) in paragraph at lines 14905--14907 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [213] [214] Underfull \hbox (badness 1466) in paragraph at lines 15056--15059 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [215] Underfull \vbox (badness 1418) has occurred while \output is active [216] Underfull \hbox (badness 10000) in paragraph at lines 15187--15191 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15198--15201 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [217] [218] [219] [220] Underfull \hbox (badness 3965) in paragraph at lines 15493--15497 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [221] [222] [223] [224] [225] [226] [227] [228] Underfull \hbox (badness 5260) in paragraph at lines 15995--15995 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [229] [230] [231] [232] Underfull \hbox (badness 4429) in paragraph at lines 16285--16288 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [233] Underfull \hbox (badness 10000) in paragraph at lines 16392--16394 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [234] Underfull \hbox (badness 2035) in paragraph at lines 16465--16469 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] Underfull \hbox (badness 2452) in paragraph at lines 17088--17092 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17088--17092 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [245] [246] Underfull \hbox (badness 1092) in paragraph at lines 17262--17267 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [247] [248] [249] [250] Underfull \hbox (badness 6741) in paragraph at lines 17515--17519 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [251] [252] [253] Underfull \vbox (badness 10000) has occurred while \output is active [254] [255] [256] [257] [258] [259] [260] Underfull \vbox (badness 10000) has occurred while \output is active [261] Underfull \vbox (badness 10000) has occurred while \output is active [262] [263] [264] [265] [266] [267] [268] [269] [270] [271] Underfull \hbox (badness 1769) in paragraph at lines 18988--18991 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [272] [273] [274] [275] Underfull \hbox (badness 10000) in paragraph at lines 19297--19299 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19303--19312 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [276] [277] [278] [279] [280] [281] [282] [283] [284] Underfull \hbox (badness 1442) in paragraph at lines 19911--19913 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [285] Underfull \hbox (badness 2452) in paragraph at lines 20007--20033 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20007--20033 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [286] [287] [288] [289] [290] [291] Underfull \hbox (badness 1248) in paragraph at lines 20405--20408 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [292] [293] [294] [295] Underfull \hbox (badness 4739) in paragraph at lines 20672--20674 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [296] [297] [298] [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] [309] [310] [311] [312] Underfull \hbox (badness 2469) in paragraph at lines 21830--21835 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [313] Underfull \hbox (badness 1675) in paragraph at lines 21917--21926 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , [314] Underfull \hbox (badness 3189) in paragraph at lines 21927--21940 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 21975--21978 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21975--21978 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [315] [316] Underfull \hbox (badness 1014) in paragraph at lines 22109--22114 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [317] [318] [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] Underfull \hbox (badness 1264) in paragraph at lines 22956--22964 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [329] Underfull \hbox (badness 4441) in paragraph at lines 22991--22994 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] Underfull \hbox (badness 5231) in paragraph at lines 23809--23811 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [341] [342] [343] [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] [357] Underfull \hbox (badness 6380) in paragraph at lines 24919--24925 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 24919--24925 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [358] [359] [360] [361] [362] [363] [364] [365] Underfull \hbox (badness 2790) in paragraph at lines 25432--25435 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25432--25435 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [366] [367] [368] [369] Underfull \hbox (badness 1194) in paragraph at lines 25760--25763 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [370] [371] [372] Underfull \hbox (badness 2368) in paragraph at lines 25967--25973 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [373] [374] [375] [376] [377] [378] Underfull \hbox (badness 10000) in paragraph at lines 26357--26360 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 10000) in paragraph at lines 26985--26987 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [388] [389] [390] [391] [392] [393] [394] Underfull \hbox (badness 2443) in paragraph at lines 27476--27484 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [395] [396] [397] [398] [399] [400] Underfull \hbox (badness 1881) in paragraph at lines 27906--27909 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are [401] Underfull \hbox (badness 6220) in paragraph at lines 27931--27933 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [402] Underfull \hbox (badness 2142) in paragraph at lines 28072--28076 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able [403] Underfull \hbox (badness 1968) in paragraph at lines 28129--28134 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [404] [405] [406] Underfull \hbox (badness 10000) in paragraph at lines 28425--28431 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28425--28431 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28425--28431 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28438--28441 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28464--28466 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [407] Underfull \hbox (badness 10000) in paragraph at lines 28510--28515 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28516--28527 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28516--28527 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28528--28531 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [408] [409] [410] [411] [412] Underfull \hbox (badness 10000) in paragraph at lines 28946--28950 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [413] [414] Underfull \hbox (badness 10000) in paragraph at lines 29093--29096 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [415] [416] Underfull \hbox (badness 7925) in paragraph at lines 29174--29178 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29174--29178 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29179--29188 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [417] [418] [419] [420] [421] [422] [423] [424] [425] [426] [427] [428] [429] [430] Underfull \hbox (badness 2726) in paragraph at lines 30193--30196 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [431] [432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443] [444] [445] [446] [447] [448] Underfull \vbox (badness 10000) has occurred while \output is active [449] [450] [451] [452] [453] [454] [455] [456] Underfull \hbox (badness 1533) in paragraph at lines 32001--32004 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [457] [458] [459] Underfull \hbox (badness 1163) in paragraph at lines 32172--32183 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [460] [461] [462] [463] [464] [465] [466] [467] Underfull \hbox (badness 6300) in paragraph at lines 32718--32720 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] Underfull \hbox (badness 10000) in paragraph at lines 33841--33845 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 33841--33845 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 33862--33864 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 33865--33869 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [484] [485] [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1655) in paragraph at lines 34467--34469 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [493] [494] [495] [496] [497] [498] [499] [500] [501] [502] [503] [504] [505] [506] [507] [508] [509] [510] Underfull \hbox (badness 2261) in paragraph at lines 35670--35675 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] [524] Underfull \hbox (badness 3668) in paragraph at lines 36705--36709 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [525] Underfull \hbox (badness 10000) in paragraph at lines 36796--36807 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [526] [527] [528] [529] [530] [531] [532] [533] [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] Underfull \hbox (badness 10000) in paragraph at lines 38428--38430 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [550] [551] [552] [553] [554] Underfull \hbox (badness 2913) in paragraph at lines 38846--38850 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [555] [556] [557] [558] Underfull \hbox (badness 1072) in paragraph at lines 39092--39096 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39097--39101 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39137--39143 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39137--39143 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39137--39143 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 39152--39159 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39152--39159 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39152--39159 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39152--39159 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [559] [560] [561] [562] Underfull \hbox (badness 2644) in paragraph at lines 39387--39391 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [563] [564] [565] [566] [567] [568] [569] [570] [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] Underfull \hbox (badness 1158) in paragraph at lines 40915--40917 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [585] [586] [587] [588] [589] [590] [591] [592] [593] Underfull \hbox (badness 1137) in paragraph at lines 41515--41521 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41533--41538 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [594] [595] Underfull \hbox (badness 1616) in paragraph at lines 41653--41658 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [596] [597] [598] [599] [600] [601] [602] [603] Underfull \hbox (badness 1472) in paragraph at lines 42199--42202 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [604] [605] [606] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42411. [607] [608] [609] [610] [611] [612] [613] [614] [615] [616] Underfull \vbox (badness 10000) has occurred while \output is active [617] Underfull \hbox (badness 10000) in paragraph at lines 43150--43154 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [618] [619] [620] [621] [622] Underfull \hbox (badness 10000) in paragraph at lines 43509--43512 [][][]\T1/zi4/m/sl/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [][]$https : / / developer . r-[]project . org / [623] [624] [625] Underfull \hbox (badness 10000) in paragraph at lines 43693--43697 [][][]\T1/zi4/m/sl/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 taskCallb ackManager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/sl/10 https : / / developer . [626] [627] [628] [629] [630] [631] [632] [633] [634] Underfull \hbox (badness 10000) in paragraph at lines 44341--44344 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [635] [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] [646] [647] Underfull \hbox (badness 1990) in paragraph at lines 45257--45265 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45257--45265 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [648] [649] [650] [651] [652] [653] [654] [655] [656] [657] [658] [659] [660] [661] [662] [663] [664] [665] [666] [667] [668] Underfull \hbox (badness 1014) in paragraph at lines 46694--46697 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [669] Underfull \hbox (badness 2401) in paragraph at lines 46827--46831 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [670] [671] Underfull \hbox (badness 3492) in paragraph at lines 46953--46955 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [672] Underfull \hbox (badness 2111) in paragraph at lines 47039--47044 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [673] [674] [675] [676] Underfull \hbox (badness 4001) in paragraph at lines 47287--47289 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [677] [678] [679] [680] [681] [682] Underfull \hbox (badness 5417) in paragraph at lines 47688--47692 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [683] Underfull \hbox (badness 10000) in paragraph at lines 47749--47753 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [684]) (./compiler-pkg.tex Chapter 2. [685] [686] [687] [688]) (./datasets-pkg.tex Chapter 3. [689] [690] [691] [692] [693] [694] [695] [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] [727] [728] [729] [730] [731] [732] [733] [734] [735] [736] [737] [738] [739] [740] [741] [742] [743] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3524--3524 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [744] [745] [746] [747] [748] [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764]) (./grDevices-pkg.tex Chapter 4. [765] [766] [767] [768] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 297--302 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/sl/10 axisTicks[][][]() []\T1 /ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1 /ptm/m/n/10 in [769] [770] [771] [772] [773] [774] [775] [776] [777] Underfull \hbox (badness 1424) in paragraph at lines 899--901 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [778] [779] [780] [781] [782] [783] Underfull \hbox (badness 5175) in paragraph at lines 1227--1229 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [784] Underfull \hbox (badness 2512) in paragraph at lines 1346--1348 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [785] [786] [787] [788] [789] Underfull \hbox (badness 1490) in paragraph at lines 1646--1651 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1659--1663 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [790] [791] [792] [793] [794] [795] Underfull \hbox (badness 1325) in paragraph at lines 2074--2084 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [796] Underfull \hbox (badness 10000) in paragraph at lines 2186--2188 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [797] [798] [799] Underfull \hbox (badness 6758) in paragraph at lines 2374--2377 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] Underfull \hbox (badness 10000) in paragraph at lines 3130--3131 [811] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] Underfull \vbox (badness 10000) has occurred while \output is active [826] [827] [828] Underfull \hbox (badness 1418) in paragraph at lines 4407--4414 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [829] [830] [831] [832] [833] [834] [835] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4872 \aliasA{symbol}{plotmath}{symbol} [836] [837] [838] [839] [840] [841] Underfull \hbox (badness 1584) in paragraph at lines 5265--5267 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5269--5276 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [842] [843] [844] [845] Underfull \hbox (badness 1377) in paragraph at lines 5571--5576 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [846] Underfull \hbox (badness 1377) in paragraph at lines 5675--5680 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [847] Underfull \hbox (badness 7344) in paragraph at lines 5744--5746 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [848] [849] Underfull \hbox (badness 2035) in paragraph at lines 5883--5892 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5883--5892 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5883--5892 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [850] Underfull \hbox (badness 10000) in paragraph at lines 5950--5955 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [851] [852] Underfull \hbox (badness 1546) in paragraph at lines 6090--6098 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [853] [854] [855] [856] [857] [858] [859] Underfull \hbox (badness 6625) in paragraph at lines 6534--6537 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [860] Underfull \hbox (badness 10000) in paragraph at lines 6638--6641 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [861] [862] [863] [864] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6875--6875 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [865] [866] [867] [868] [869] [870] [871] [872] [873] Underfull \hbox (badness 1189) in paragraph at lines 7503--7505 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [874] Underfull \hbox (badness 10000) in paragraph at lines 7608--7610 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [875] [876] [877] [878] [879] Underfull \hbox (badness 3780) in paragraph at lines 7923--7929 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/s l/10 "AvantGarde"[]\T1/ptm/m/n/10 , [880] [881] [882] [883] [884]) (./graphics-pkg.tex Chapter 5. [885] [886] [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] [899] [900] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1037--1037 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [901] [902] [903] [904] [905] [906] Underfull \hbox (badness 4634) in paragraph at lines 1410--1413 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [907] [908] [909] [910] [911] [912] [913] [914] [915] [916] [917] [918] [919] [920] [921] Underfull \hbox (badness 1728) in paragraph at lines 2388--2390 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [922] Underfull \hbox (badness 1009) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [923] [924] [925] [926] [927] [928] [929] [930] [931] [932] [933] [934] [935] [936] [937] [938] [939] [940] [941] [942] [943] [944] Underfull \vbox (badness 10000) has occurred while \output is active [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] [955] [956] Underfull \hbox (badness 3229) in paragraph at lines 4733--4738 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [957] [958] [959] [960] [961] Underfull \hbox (badness 1107) in paragraph at lines 5233--5239 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [962] Underfull \hbox (badness 10000) in paragraph at lines 5362--5365 [963] Underfull \hbox (badness 10000) in paragraph at lines 5423--5425 [964 ] [965 ] [966] [967] [968] [969] [970] [971] [972] [973] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6097 \aliasA{plot}{plot.default}{plot} [974] [975] [976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6997--6998 [][] [988 ] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] Underfull \hbox (badness 4954) in paragraph at lines 9109--9111 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9111--9113 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1020] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9191 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9191 \HeaderA{units}{Graphical Units}{units} [1021] [1022] [1023] [1024]) (./grid-pkg.tex Chapter 6. [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] [1033] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1043] Underfull \vbox (badness 10000) has occurred while \output is active [1044] [1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1073] [1074] [1075] [1076] [1077] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] Underfull \vbox (badness 10000) has occurred while \output is active [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] Underfull \hbox (badness 1067) in paragraph at lines 4842--4845 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1101] [1102] [1103] [1104] [1105] Underfull \hbox (badness 7256) in paragraph at lines 5193--5195 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1106] [1107] [1108] [1109] [1110] [1111] [1112] Underfull \hbox (badness 2142) in paragraph at lines 5647--5651 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1113] [1114] Underfull \hbox (badness 4699) in paragraph at lines 5729--5734 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1115] [1116] [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144]) (./methods-pkg.tex Chapter 7. [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] Underfull \vbox (badness 10000) has occurred while \output is active [1153] Underfull \vbox (badness 10000) has occurred while \output is active [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] Underfull \hbox (badness 2237) in paragraph at lines 1384--1386 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1163] [1164] [1165] [1166] [1167] [1168] [1169] [1170] Underfull \hbox (badness 10000) in paragraph at lines 1980--1985 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1980--1985 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1171] [1172] [1173] Underfull \hbox (badness 2213) in paragraph at lines 2212--2217 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1174] [1175] [1176] [1177] [1178] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1179] [1180] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2744--2749 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1181] [1182] [1183] [1184] [1185] [1186] [1187] Underfull \hbox (badness 1102) in paragraph at lines 3301--3303 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1188] [1189] [1190] [1191] [1192] Underfull \hbox (badness 10000) in paragraph at lines 3638--3647 []\T1/ptm/m/n/10 The [1193] [1194] Underfull \hbox (badness 10000) in paragraph at lines 3758--3759 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1195] Underfull \hbox (badness 10000) in paragraph at lines 3842--3843 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1196] [1197] [1198] [1199] [1200] [1201] [1202] [1203] Underfull \hbox (badness 1769) in paragraph at lines 4473--4479 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4473--4479 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1204] [1205] [1206] [1207] [1208] [1209] [1210] [1211] [1212] Underfull \vbox (badness 10000) has occurred while \output is active [1213] Underfull \vbox (badness 10000) has occurred while \output is active [1214] [1215] [1216] Underfull \hbox (badness 4036) in paragraph at lines 5438--5441 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1217] Underfull \hbox (badness 3803) in paragraph at lines 5513--5515 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1218] [1219] [1220] Underfull \hbox (badness 1087) in paragraph at lines 5744--5749 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] Underfull \hbox (badness 1675) in paragraph at lines 6451--6457 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1229] [1230] [1231] [1232] Underfull \vbox (badness 10000) has occurred while \output is active [1233] [1234] [1235] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6972 \aliasA{S4}{S3Part}{S4} [1236] [1237] [1238] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7228 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7230 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7231 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7233 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7234 \aliasA{Summary}{S4groupGeneric}{Summary} [1239] Underfull \hbox (badness 2050) in paragraph at lines 7295--7299 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1240] [1241] Underfull \hbox (badness 1286) in paragraph at lines 7483--7485 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] [1279] [1280] Underfull \hbox (badness 1158) in paragraph at lines 10490--10493 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1281] Underfull \hbox (badness 1852) in paragraph at lines 10568--10572 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1282] [1283] [1284] [1285]) (./parallel-pkg.tex [1286] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1287] [1288] [1289] [1290] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1291] [1292] [1293] [1294] [1295] [1296] [1297] [1298] [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] Underfull \hbox (badness 3386) in paragraph at lines 1400--1403 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1307] [1308] [1309]) (./splines-pkg.tex [1310] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324]) (./stats-pkg.tex Chapter 10. [1325] [1326] [1327] [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1346] [1347] [1348] [1349] [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] Underfull \hbox (badness 2503) in paragraph at lines 3557--3560 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1377] [1378] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3670. [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] [1395] Underfull \hbox (badness 3989) in paragraph at lines 4816--4823 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1396] [1397] [1398] [1399] [1400] [1401] [1402] [1403] [1404] Underfull \hbox (badness 2556) in paragraph at lines 5470--5473 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1405] [1406] [1407] [1408] [1409] [1410] Underfull \hbox (badness 2503) in paragraph at lines 5882--5886 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] Underfull \hbox (badness 7081) in paragraph at lines 6674--6677 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6678--6680 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1424] [1425] [1426] [1427] [1428] Underfull \vbox (badness 10000) has occurred while \output is active [1429] [1430] [1431] Underfull \vbox (badness 10000) has occurred while \output is active [1432] [1433] [1434] [1435] [1436] Underfull \hbox (badness 10000) in paragraph at lines 7574--7577 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/sl/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] [1455] [1456] Underfull \vbox (badness 10000) has occurred while \output is active [1457] [1458] [1459] [1460] [1461] Underfull \hbox (badness 2626) in paragraph at lines 9271--9274 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1462] [1463] Underfull \hbox (badness 2503) in paragraph at lines 9378--9382 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] Underfull \hbox (badness 4518) in paragraph at lines 10733--10738 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1483] [1484] [1485] [1486] [1487] Underfull \hbox (badness 2142) in paragraph at lines 11095--11098 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11114--11117 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1488] Underfull \hbox (badness 1708) in paragraph at lines 11176--11180 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1489] [1490] [1491] [1492] [1493] Underfull \hbox (badness 1694) in paragraph at lines 11572--11575 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12053 \aliasA{hat}{influence.measures}{hat} [1502] [1503] Underfull \hbox (badness 1484) in paragraph at lines 12198--12200 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] Underfull \hbox (badness 10000) in paragraph at lines 12785--12787 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1513] [1514] [1515] [1516] [1517] Underfull \hbox (badness 2894) in paragraph at lines 13127--13131 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1518] [1519] [1520] [1521] [1522] [1523] Underfull \hbox (badness 1496) in paragraph at lines 13555--13561 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1524] [1525] [1526] [1527] [1528] [1529] Underfull \hbox (badness 4518) in paragraph at lines 13958--13963 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1530] [1531] [1532] [1533] [1534] [1535] [1536] [1537] [1538] [1539] Underfull \hbox (badness 4518) in paragraph at lines 14620--14625 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1540] [1541] Underfull \hbox (badness 6412) in paragraph at lines 14760--14764 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14767--14769 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1542] [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] Underfull \hbox (badness 2503) in paragraph at lines 15843--15847 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1558] [1559] [1560] [1561] [1562] [1563] [1564] Underfull \hbox (badness 10000) in paragraph at lines 16356--16362 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16356--16362 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] [1577] [1578] [1579] [1580] [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] [1589] Underfull \hbox (badness 1158) in paragraph at lines 18014--18017 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1590] [1591] Underfull \vbox (badness 10000) has occurred while \output is active [1592] Underfull \vbox (badness 10000) has occurred while \output is active [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] Underfull \hbox (badness 1377) in paragraph at lines 19057--19062 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19062--19065 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19075--19079 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19075--19079 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19083--19087 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1606] [1607] [1608] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19308--19308 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Underfull \vbox (badness 10000) has occurred while \output is active [1609] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19311--19311 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1610] [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 1337) in paragraph at lines 19773--19776 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1616] [1617] [1618] [1619] [1620] [1621] [1622] [1623] Underfull \hbox (badness 10000) in paragraph at lines 20242--20248 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1624] [1625] [1626] [1627] [1628] [1629] [1630] Underfull \hbox (badness 1194) in paragraph at lines 20669--20672 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1631] [1632] [1633] [1634] [1635] [1636] Underfull \hbox (badness 2503) in paragraph at lines 21047--21050 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21074--21076 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1637] [1638] [1639] [1640] [1641] [1642] [1643] [1644] [1645] [1646] [1647] [1648] [1649] [1650] [1651] [1652] [1653] Underfull \hbox (badness 10000) in paragraph at lines 22152--22158 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] [1675] [1676] Underfull \hbox (badness 1337) in paragraph at lines 23628--23634 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] Underfull \hbox (badness 1436) in paragraph at lines 24118--24121 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, [1685] Underfull \hbox (badness 10000) in paragraph at lines 24256--24257 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 1824) in paragraph at lines 25226--25232 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25226--25232 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25247--25250 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] Underfull \hbox (badness 2165) in paragraph at lines 25822--25827 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1710] [1711] [1712] [1713] Underfull \hbox (badness 1867) in paragraph at lines 26032--26034 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26048--26052 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] [1728] [1729] [1730] [1731] [1732] [1733] [1734] [1735] [1736] Underfull \vbox (badness 10000) has occurred while \output is active [1737] Underfull \hbox (badness 3514) in paragraph at lines 27700--27705 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1738] [1739] [1740] [1741] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27934--27934 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1742] Underfull \hbox (badness 3514) in paragraph at lines 27970--27976 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1743] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28030--28030 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1744] [1745] Underfull \hbox (badness 3514) in paragraph at lines 28203--28208 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1746] [1747] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1748] Underfull \hbox (badness 3514) in paragraph at lines 28355--28360 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1749] Underfull \hbox (badness 3514) in paragraph at lines 28449--28454 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1750] [1751] Underfull \hbox (badness 6691) in paragraph at lines 28541--28546 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] Underfull \hbox (badness 4024) in paragraph at lines 29028--29031 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1760] [1761] [1762] [1763] [1764] [1765] [1766] [1767] [1768] Underfull \hbox (badness 5431) in paragraph at lines 29631--29633 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1769] [1770] [1771] Underfull \hbox (badness 5431) in paragraph at lines 29841--29844 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1772] [1773] [1774] [1775] [1776] Underfull \hbox (badness 1337) in paragraph at lines 30156--30160 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1777] [1778] [1779] Underfull \hbox (badness 1127) in paragraph at lines 30293--30296 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1780] [1781] Underfull \hbox (badness 1616) in paragraph at lines 30499--30502 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] [1796] [1797] [1798] [1799] [1800] Underfull \hbox (badness 3557) in paragraph at lines 31726--31730 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1801] [1802] [1803] [1804] [1805] [1806] Underfull \hbox (badness 1337) in paragraph at lines 32093--32097 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] Underfull \hbox (badness 1337) in paragraph at lines 32621--32625 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1815] [1816] [1817] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32829--32829 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1818] [1819] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32990--32990 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1820] [1821] [1822] [1823] [1824]) (./stats4-pkg.tex Chapter 11. [1825] [1826] [1827] Underfull \vbox (badness 10000) has occurred while \output is active [1828] [1829] [1830] [1831] [1832] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1833] [1834] [1835]) (./tcltk-pkg.tex [1836] Chapter 12. [1837] [1838] [1839] [1840] [1841] [1842] [1843] Underfull \vbox (badness 10000) has occurred while \output is active [1844] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [1845] [1846] [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] [1855] [1856]) (./tools-pkg.tex Chapter 13. [1857] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1858] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1859] [1860] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [1861] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [1862] [1863] Underfull \hbox (badness 1142) in paragraph at lines 464--468 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] Underfull \hbox (badness 1014) in paragraph at lines 1220--1222 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1226--1228 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [1875] Underfull \hbox (badness 10000) in paragraph at lines 1263--1266 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1263--1266 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1876] [1877] [1878] [1879] [1880] Underfull \hbox (badness 10000) in paragraph at lines 1637--1640 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/sl/10 CRAN_aliases_db[]\T1/ptm /m/n/10 , []\T1/zi4/m/sl/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_current_db []\T1/ptm/m/n/10 and [1881] [1882] Underfull \hbox (badness 4096) in paragraph at lines 1756--1764 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1766--1768 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1883] [1884] [1885] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1967 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.1968 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1886] [1887] [1888] [1889] [1890] [1891] [1892] Underfull \hbox (badness 3386) in paragraph at lines 2442--2445 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [1893] [1894] Underfull \hbox (badness 4096) in paragraph at lines 2582--2590 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1895] [1896] [1897] [1898] [1899] [1900] [1901] [1902] [1903] [1904] [1905] [1906] [1907] Underfull \hbox (badness 1424) in paragraph at lines 3516--3518 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1908] [1909] [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] Underfull \hbox (badness 10000) in paragraph at lines 4232--4234 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1919] [1920] Underfull \hbox (badness 10000) in paragraph at lines 4388--4391 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/sl/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/sl/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1921] [1922] [1923] [1924] [1925] [1926] Underfull \hbox (badness 1796) in paragraph at lines 4745--4750 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [1927] Underfull \hbox (badness 1838) in paragraph at lines 4831--4837 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4831--4837 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1928] [1929] [1930] [1931] Underfull \hbox (badness 2197) in paragraph at lines 5112--5122 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [1932] Underfull \hbox (badness 1571) in paragraph at lines 5178--5182 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1933] [1934] [1935]) (./utils-pkg.tex [1936] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1948] [1949] Underfull \hbox (badness 3861) in paragraph at lines 934--939 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1950] [1951] [1952] Underfull \hbox (badness 10000) in paragraph at lines 1139--1141 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1953] [1954] [1955] Underfull \vbox (badness 10000) has occurred while \output is active [1956] [1957] [1958] [1959] [1960] Underfull \hbox (badness 1371) in paragraph at lines 1666--1668 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] [1970] Underfull \hbox (badness 2057) in paragraph at lines 2386--2388 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1971] Underfull \hbox (badness 2150) in paragraph at lines 2461--2468 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2461--2468 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [1972] [1973] [1974] [1975] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2738 ... the Clipboard in MS Windows}{clipboard} [1976] [1977] [1978] [1979] [1980] [1981] [1982] [1983] [1984] [1985] [1986] [1987] [1988] [1989] [1990] [1991] [1992] [1993] [1994] Underfull \hbox (badness 6842) in paragraph at lines 4048--4053 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1995] Underfull \hbox (badness 1430) in paragraph at lines 4111--4115 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1996] Underfull \hbox (badness 1184) in paragraph at lines 4182--4198 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4182--4198 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4182--4198 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [1997] [1998] Underfull \hbox (badness 10000) in paragraph at lines 4332--4334 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1999] [2000] [2001] [2002] [2003] [2004] [2005] [2006] [2007] [2008] [2009] [2010] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5111 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5111 ...mat Unordered and Ordered Lists}{format} [2011] [2012] [2013] [2014] [2015] [2016] [2017] [2018] Underfull \hbox (badness 1622) in paragraph at lines 5634--5638 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2019] [2020] [2021] [2022] [2023] Underfull \hbox (badness 1448) in paragraph at lines 6019--6024 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] Underfull \hbox (badness 1371) in paragraph at lines 6567--6569 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2032] Underfull \hbox (badness 1502) in paragraph at lines 6656--6662 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6656--6662 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2033] [2034] [2035] Underfull \hbox (badness 10000) in paragraph at lines 6833--6842 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6833--6842 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2036] Underfull \hbox (badness 2150) in paragraph at lines 6895--6898 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2037] [2038] Underfull \hbox (badness 3118) in paragraph at lines 7034--7036 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2039] [2040] Underfull \hbox (badness 1325) in paragraph at lines 7213--7217 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2041] Underfull \hbox (badness 1424) in paragraph at lines 7305--7308 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2042] Underfull \hbox (badness 3219) in paragraph at lines 7377--7384 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7377--7384 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7377--7384 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7377--7384 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7385--7388 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2043] Underfull \hbox (badness 1024) in paragraph at lines 7514--7517 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2044] Underfull \hbox (badness 10000) in paragraph at lines 7547--7552 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2045] Underfull \hbox (badness 5133) in paragraph at lines 7606--7610 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2046] [2047] [2048] [2049] [2050] [2051] [2052] [2053] [2054] [2055] Underfull \hbox (badness 10000) in paragraph at lines 8270--8272 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2056] [2057] [2058] [2059] [2060] [2061] [2062] [2063] [2064] [2065] [2066] [2067] Underfull \hbox (badness 2310) in paragraph at lines 9057--9062 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] Underfull \hbox (badness 1248) in paragraph at lines 9628--9632 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2076] Underfull \hbox (badness 1789) in paragraph at lines 9706--9708 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2077] [2078] [2079] [2080] Underfull \hbox (badness 2600) in paragraph at lines 9930--9933 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 1097) in paragraph at lines 10567--10570 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2089] [2090] Underfull \hbox (badness 3000) in paragraph at lines 10703--10708 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2091] [2092] [2093] [2094] [2095] [2096] [2097] [2098] Underfull \hbox (badness 2134) in paragraph at lines 11298--11303 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2099] Underfull \hbox (badness 10000) in paragraph at lines 11354--11359 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11354--11359 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2100] [2101] [2102] [2103] [2104] [2105] [2106] [2107] Underfull \hbox (badness 1824) in paragraph at lines 11852--11856 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . Ac-cessed [2108] [2109] [2110] [2111] [2112] [2113] Underfull \hbox (badness 4060) in paragraph at lines 12297--12300 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/sl/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/sl/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able Overfull \hbox (18.77168pt too wide) in paragraph at lines 12320--12320 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2114] [2115] [2116] [2117] Underfull \hbox (badness 2150) in paragraph at lines 12575--12577 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / www . gnu . org / software / emac s / manual / [2118] [2119] [2120] Underfull \hbox (badness 10000) in paragraph at lines 12795--12799 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/sl/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able [2121] Underfull \hbox (badness 10000) in paragraph at lines 12828--12834 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12843--12849 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2122] [2123] Underfull \hbox (badness 1009) in paragraph at lines 13018--13030 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If [2124] Underfull \hbox (badness 4779) in paragraph at lines 13058--13060 []\T1/ptm/m/n/10 The file `\T1/zi4/m/sl/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/sl/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and Underfull \hbox (badness 1077) in paragraph at lines 13088--13095 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2125] [2126] [2127] [2128] [2129] [2130] Underfull \hbox (badness 3780) in paragraph at lines 13513--13519 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/sl/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13531--13534 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/sl/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2131] [2132] [2133] [2134] Underfull \hbox (badness 2302) in paragraph at lines 13741--13743 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2135] [2136] [2137] [2138] Underfull \hbox (badness 4441) in paragraph at lines 14040--14045 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/sl/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/sl/10 deparse[][][](control = \T1/ptm/m/sl/10 control\T1/zi4/ m/sl/10 ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 14049--14052 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2139] [2140] [2141] [2142] [2143] [2144] [2145] Underfull \hbox (badness 2932) in paragraph at lines 14480--14487 []\T1/ptm/m/n/10 If []\T1/zi4/m/sl/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14480--14487 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/sl/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. Ob- [2146] [2147] Underfull \hbox (badness 1460) in paragraph at lines 14644--14653 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/sl/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/sl/10 tar []\T1/ptm/m/n /10 which used Underfull \hbox (badness 1019) in paragraph at lines 14662--14674 []\T1/ptm/m/n/10 For GNU []\T1/zi4/m/sl/10 tar[]\T1/ptm/m/n/10 , `[]\T1/zi4/m/s l/10 --format=ustar[]\T1/ptm/m/n/10 ' forces a more portable for-mat. (The de-f ault is set at Underfull \hbox (badness 1527) in paragraph at lines 14662--14674 \T1/ptm/m/n/10 com-pi-la-tion and will be shown at the end of the out-put from []\T1/zi4/m/sl/10 tar --help[]\T1/ptm/m/n/10 : for ver-sion [2148] [2149] Underfull \hbox (badness 6510) in paragraph at lines 14794--14798 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/sl/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/sl/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14801--14804 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14801--14804 \T1/zi4/m/sl/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2150] [2151] [2152] [2153] [2154] [2155] [2156] [2157] [2158] Underfull \hbox (badness 10000) in paragraph at lines 15474--15479 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/sl/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/sl/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15474--15479 [][][]\T1/zi4/m/sl/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15480--15482 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See [2159] Underfull \hbox (badness 10000) in paragraph at lines 15539--15542 [][][]\T1/zi4/m/sl/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174]) [2175] [2176] (./KernSmooth-pkg.tex Chapter 15. [2177] [2178] [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186]) (./MASS-pkg.tex Chapter 16. [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.confint.g lm}) has been already used, duplicate ignored \relax l.1479 ...{confint.glm}{confint-MASS}{confint.glm} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.confint.n ls}) has been already used, duplicate ignored \relax l.1480 ...{confint.nls}{confint-MASS}{confint.nls} [2208] [2209] [2210] [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] Underfull \hbox (badness 10000) in paragraph at lines 2789--2794 []\T1/zi4/m/sl/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/s l/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "negative [2226] [2227] Underfull \hbox (badness 4686) in paragraph at lines 2961--2963 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 1117) in paragraph at lines 4740--4743 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [2253] Underfull \hbox (badness 1117) in paragraph at lines 4819--4822 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269] [2270] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6086 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk.1}) h as been already used, duplicate ignored \relax l.6086 ...sical N, P, K Factorial Experiment}{npk} [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] [2280] [2281] [2282] Underfull \hbox (badness 1117) in paragraph at lines 6987--6994 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [2283] Underfull \hbox (badness 3138) in paragraph at lines 7058--7064 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2284] [2285] [2286] Underfull \hbox (badness 1910) in paragraph at lines 7237--7240 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/sl/10 min(p, [2287] [2288] [2289] [2290] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.profile.g lm}) has been already used, duplicate ignored \relax l.7514 ... for Profiling glm Objects}{profile.glm} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.profile.g lm.1}) has been already used, duplicate ignored \relax l.7514 ... for Profiling glm Objects}{profile.glm} [2291] [2292] [2293] [2294] Underfull \hbox (badness 4686) in paragraph at lines 7809--7811 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2295] [2296] [2297] [2298] [2299] [2300] [2301] [2302] [2303] [2304] [2305] [2306] [2307] [2308] [2309] [2310] [2311] [2312] [2313] [2314] [2315] [2316] [2317] [2318] [2319] [2320] [2321] [2322] [2323] [2324] [2325] [2326] [2327] [2328] [2329] [2330] [2331]) (./Matrix-pkg.tex [2332] Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 35--38 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 35--38 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2333] Underfull \hbox (badness 1769) in paragraph at lines 89--92 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2334] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.all.equal }) has been already used, duplicate ignored \relax l.182 ...{all.equal}{all.equal-methods}{all.equal} [2335] Underfull \hbox (badness 3098) in paragraph at lines 264--266 []\T1/ptm/m/n/10 optional ar-gu-ments passed to the de-fault method for generic func-tion [2336] [2337] [2338] Underfull \hbox (badness 5119) in paragraph at lines 492--496 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2339] [2340] Underfull \hbox (badness 2035) in paragraph at lines 590--593 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/sl/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/sl/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/sl/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2341] [2342] [2343] Underfull \hbox (badness 5817) in paragraph at lines 913--916 []\T1/ptm/m/n/10 Class [][][]\T1/zi4/m/sl/10 BunchKaufmanFactorization[][][][]\ T1/ptm/m/n/10 , di-rectly. Class [][][]\T1/zi4/m/sl/10 MatrixFactorization[][][ ][]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 6758) in paragraph at lines 919--924 []\T1/ptm/m/n/10 Objects can be gen-er-ated di-rectly by calls of the form []\T 1/zi4/m/sl/10 new("BunchKaufman", ...) Underfull \hbox (badness 2961) in paragraph at lines 919--924 []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 new("pBunchKaufman", ...)[]\T1/ptm/m/n/10 , but they are more typ-i-cally ob-tained as the value of [2344] [2345] Underfull \hbox (badness 10000) in paragraph at lines 1081--1086 []\T1/ptm/m/n/10 An ob-ject rep-re-sent-ing the fac-tor-iza-tion, in-her-it-ing from vir-tual class [2346] [2347] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.cbind2.Rd ash.methods}) has been already used, duplicate ignored \relax l.1185 ... on cbind2/rbind2}{cbind2.Rdash.methods} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.cbind2}) has been already used, duplicate ignored \relax l.1186 \aliasA{cbind2}{cbind2-methods}{cbind2} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rbind2}) has been already used, duplicate ignored \relax l.1195 \aliasA{rbind2}{cbind2-methods}{rbind2} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rbind2.Rd ash.methods}) has been already used, duplicate ignored \relax l.1204 ...s}{cbind2-methods}{rbind2.Rdash.methods} [2348] Underfull \hbox (badness 10000) in paragraph at lines 1322--1329 []\T1/ptm/m/n/10 The im-ple-men-ta-tion of class []\T1/zi4/m/sl/10 CHMfactor [] \T1/ptm/m/n/10 is based on CHOLMOD's C-level [2349] [2350] [2351] [2352] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol}) ha s been already used, duplicate ignored \relax l.1625 \aliasA{chol}{chol-methods}{chol} Underfull \hbox (badness 6220) in paragraph at lines 1656--1658 []\T1/ptm/m/n/10 Methods for [][][]\T1/zi4/m/sl/10 sparseMatrix[][][] []\T1/ptm /m/n/10 are built on CHOLMOD rou-tines []\T1/zi4/m/sl/10 cholmod_analyze []\T1/ ptm/m/n/10 and [2353] Underfull \hbox (badness 2334) in paragraph at lines 1730--1734 []\T1/ptm/m/n/10 The LA-PACK source code, in-clud-ing doc-u-men-ta-tion; see [] []$\T1/zi4/m/sl/10 https : / / netlib . org / lapack / Underfull \hbox (badness 1616) in paragraph at lines 1730--1734 \T1/zi4/m/sl/10 double / dpstrf . f$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 h ttps : / / netlib . org / lapack / double / dpotrf . f$[][]\T1/ptm/m/n/10 , and [][]$\T1/zi4/m/sl/10 https : / / netlib . [2354] Underfull \vbox (badness 10000) has occurred while \output is active [2355] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol2inv} ) has been already used, duplicate ignored \relax l.1854 ...sA{chol2inv}{chol2inv-methods}{chol2inv} [2356] [2357] Underfull \hbox (badness 10000) in paragraph at lines 2005--2008 []\T1/ptm/m/n/10 Class [][][]\T1/zi4/m/sl/10 CholeskyFactorization[][][][]\T1/p tm/m/n/10 , di-rectly. Class [][][]\T1/zi4/m/sl/10 MatrixFactorization[][][][]\ T1/ptm/m/n/10 , by class Underfull \hbox (badness 7722) in paragraph at lines 2011--2019 []\T1/ptm/m/n/10 Objects can be gen-er-ated di-rectly by calls of the form []\T 1/zi4/m/sl/10 new("Cholesky", ...) []\T1/ptm/m/n/10 or Underfull \hbox (badness 1990) in paragraph at lines 2051--2060 []\T1/ptm/m/n/10 In \T1/ptm/b/n/10 Ma-trix []\T1/zi4/m/sl/10 < 1.6-0[]\T1/ptm/m /n/10 , class []\T1/zi4/m/sl/10 Cholesky []\T1/ptm/m/n/10 ex-tended [][][]\T1/z i4/m/sl/10 dtrMatrix[][][] []\T1/ptm/m/n/10 and class []\T1/zi4/m/sl/10 pCholes ky []\T1/ptm/m/n/10 ex-tended Underfull \hbox (badness 2334) in paragraph at lines 2066--2070 []\T1/ptm/m/n/10 The LA-PACK source code, in-clud-ing doc-u-men-ta-tion; see [] []$\T1/zi4/m/sl/10 https : / / netlib . org / lapack / Underfull \hbox (badness 1616) in paragraph at lines 2066--2070 \T1/zi4/m/sl/10 double / dpstrf . f$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 h ttps : / / netlib . org / lapack / double / dpotrf . f$[][]\T1/ptm/m/n/10 , and [][]$\T1/zi4/m/sl/10 https : / / netlib . [2358] [2359] Underfull \hbox (badness 6220) in paragraph at lines 2185--2187 []\T1/ptm/m/n/10 Methods for [][][]\T1/zi4/m/sl/10 sparseMatrix[][][] []\T1/ptm /m/n/10 are built on CHOLMOD rou-tines []\T1/zi4/m/sl/10 cholmod_analyze []\T1/ ptm/m/n/10 and [2360] [2361] Underfull \hbox (badness 2334) in paragraph at lines 2315--2319 []\T1/ptm/m/n/10 The LA-PACK source code, in-clud-ing doc-u-men-ta-tion; see [] []$\T1/zi4/m/sl/10 https : / / netlib . org / lapack / Underfull \hbox (badness 1616) in paragraph at lines 2315--2319 \T1/zi4/m/sl/10 double / dpstrf . f$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 h ttps : / / netlib . org / lapack / double / dpotrf . f$[][]\T1/ptm/m/n/10 , and [][]$\T1/zi4/m/sl/10 https : / / netlib . [2362] Underfull \vbox (badness 10000) has occurred while \output is active [2363] Underfull \vbox (badness 10000) has occurred while \output is active [2364] [2365] [2366] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colMeans} ) has been already used, duplicate ignored \relax l.2696 ...asA{colMeans}{colSums-methods}{colMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums}) has been already used, duplicate ignored \relax l.2704 \aliasA{colSums}{colSums-methods}{colSums} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowMeans} ) has been already used, duplicate ignored \relax l.2711 ...asA{rowMeans}{colSums-methods}{rowMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowSums}) has been already used, duplicate ignored \relax l.2719 \aliasA{rowSums}{colSums-methods}{rowSums} [2367] [2368] [2369] Underfull \hbox (badness 3547) in paragraph at lines 2888--2891 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2370] [2371] [2372] [2373] [2374] [2375] Underfull \hbox (badness 1983) in paragraph at lines 3390--3398 []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 unpackedMatrix[][][][]\T1/ptm/m/n/10 . Al-ter-na-tively into the (cur-rently) three sub-classes [][][]\T1/zi4/m/sl/ 10 ddenseMatrix[][][][]\T1/ptm/m/n/10 , [2376] [2377] [2378] [2379] Underfull \hbox (badness 2717) in paragraph at lines 3712--3716 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2380] Underfull \hbox (badness 3417) in paragraph at lines 3828--3830 []\T1/zi4/m/sl/10 .sparseDiagonal() []\T1/ptm/m/n/10 ex-ists pri-mar-ily to lev er-age ef-fi-cient C-level meth-ods avail-able for [2381] [2382] Underfull \hbox (badness 8019) in paragraph at lines 3933--3935 []\T1/zi4/m/sl/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/sl/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 3936--3940 []\T1/zi4/m/sl/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2383] [2384] [2385] [2386] Underfull \hbox (badness 1902) in paragraph at lines 4263--4265 [][][]\T1/zi4/m/sl/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/sl/10 zapsmall(x, Underfull \hbox (badness 2020) in paragraph at lines 4300--4303 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/sl/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2387] [2388] [2389] Underfull \hbox (badness 4378) in paragraph at lines 4503--4512 []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/sl/10 chol[][][]() []\T1/ptm/m/n/10 is typ- i-cally used, e.g., see []\T1/zi4/m/sl/10 selectMethod("coerce", c(from="dsyMat rix", [2390] [2391] [2392] [2393] Underfull \hbox (badness 10000) in paragraph at lines 4834--4837 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "dMatrix"[]\T1/ptm/m/n/10 , by class [ ]\T1/zi4/m/sl/10 "dsparseMatrix"[]\T1/ptm/m/n/10 ; class []\T1/zi4/m/sl/10 "spa rseMatrix"[]\T1/ptm/m/n/10 , by classes [2394] Underfull \hbox (badness 4518) in paragraph at lines 4929--4932 []\T1/zi4/m/sl/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/sl/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 type = Underfull \hbox (badness 3690) in paragraph at lines 4932--4935 []\T1/zi4/m/sl/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/sl/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 type = [2395] [2396] Underfull \hbox (badness 2318) in paragraph at lines 5035--5039 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/sl/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/sl/10 "dMatrix"[]\T1/ptm/m/n/10 , [2397] Underfull \hbox (badness 3240) in paragraph at lines 5151--5155 []\T1/zi4/m/sl/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/sl/10 determinant[][][](x) [2398] [2399] [2400] [2401] Underfull \hbox (badness 10000) in paragraph at lines 5399--5401 []\T1/ptm/m/n/10 a ma-trix fac-tor-iza-tion, typ-i-cally in-her-it-ing from vir -tual class [2402] Underfull \hbox (badness 10000) in paragraph at lines 5522--5529 []\T1/zi4/m/sl/10 signature(x = "CHMfactor")[]\T1/ptm/m/n/10 : as []\T1/zi4/m/s l/10 expand2[]\T1/ptm/m/n/10 , but re-turn-ing []\T1/zi4/m/sl/10 list(P, L)[]\T 1/ptm/m/n/10 . Underfull \hbox (badness 1776) in paragraph at lines 5522--5529 []\T1/zi4/m/sl/10 expand(x)[["P"]] []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 expan d2(x)[["P1"]] []\T1/ptm/m/n/10 rep-re-sent the same per-mu-ta-tion ma-trix Underfull \hbox (badness 10000) in paragraph at lines 5529--5544 []\T1/zi4/m/sl/10 signature(x = "sparseLU")[]\T1/ptm/m/n/10 : as []\T1/zi4/m/sl /10 expand2[]\T1/ptm/m/n/10 , but re-turn-ing []\T1/zi4/m/sl/10 list(P, L, U, Q )[]\T1/ptm/m/n/10 . Underfull \hbox (badness 10000) in paragraph at lines 5544--5549 []\T1/zi4/m/sl/10 signature(x = "denseLU")[]\T1/ptm/m/n/10 : as []\T1/zi4/m/sl/ 10 expand2[]\T1/ptm/m/n/10 , but re-turn-ing []\T1/zi4/m/sl/10 list(L, U, P)[]\ T1/ptm/m/n/10 . Underfull \hbox (badness 1142) in paragraph at lines 5544--5549 []\T1/zi4/m/sl/10 expand(x)[["P"]] []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 expan d2(x)[["P1."]] []\T1/ptm/m/n/10 are iden-ti-cal mod-ulo []\T1/zi4/m/sl/10 Dimna mes[]\T1/ptm/m/n/10 . The [2403] [2404] [2405] [2406] [2407] [2408] Underfull \hbox (badness 1087) in paragraph at lines 5987--5993 []\T1/ptm/m/n/10 a string whose first three char-ac-ters spec-ify the class of the re-sult. It Underfull \hbox (badness 10000) in paragraph at lines 6000--6002 []\T1/ptm/m/n/10 a string in []\T1/zi4/m/sl/10 c("trace", "sumLog", "prod", "mi n", "max", "range", [2409] [2410] [2411] [2412] Underfull \hbox (badness 1931) in paragraph at lines 6262--6264 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/sl/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2413] [2414] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.image}) h as been already used, duplicate ignored \relax l.6399 \aliasA{image}{image-methods}{image} [2415] Underfull \hbox (badness 1005) in paragraph at lines 6476--6481 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/sl/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 6476--6481 \T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/sl/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is Underfull \hbox (badness 5862) in paragraph at lines 6495--6498 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/sl/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2416] Overfull \hbox (42.75635pt too wide) in paragraph at lines 6545--6545 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2417] [2418] [2419] [2420] Underfull \hbox (badness 1509) in paragraph at lines 6810--6812 []\T1/ptm/m/n/10 an in-te-ger off-set, in-di-cat-ing that the re-sult should be a per-mu-ta-tion of [2421] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.anyNA}) h as been already used, duplicate ignored \relax l.6888 \aliasA{anyNA}{is.na-methods}{anyNA} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.finite }) has been already used, duplicate ignored \relax l.6895 ...asA{is.finite}{is.na-methods}{is.finite} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.infini te}) has been already used, duplicate ignored \relax l.6903 ...is.infinite}{is.na-methods}{is.infinite} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.na}) h as been already used, duplicate ignored \relax l.6911 \aliasA{is.na}{is.na-methods}{is.na} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.nan}) has been already used, duplicate ignored \relax l.6918 \aliasA{is.nan}{is.na-methods}{is.nan} [2422] [2423] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.isSymmetr ic}) has been already used, duplicate ignored \relax l.7077 ...etric}{isSymmetric-methods}{isSymmetric} [2424] Overfull \hbox (26.39984pt too wide) in paragraph at lines 7124--7124 []\T1/zi4/m/sl/10 isSymmetric(object, checkDN = TRUE, tol = 100 * .Machine$dou ble.eps, tol1 = 8 * tol, ...)[] [2425] [2426] [2427] Underfull \vbox (badness 10000) has occurred while \output is active [2428] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.kronecker }) has been already used, duplicate ignored \relax l.7453 ...kronecker}{kronecker-methods}{kronecker} [2429] [2430] [2431 pdfTeX warning (ext4): destination with the same identifier (name{Rfn.*,ndiMatr ix,Matrix.Rdash.method}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.7725 \item[\code{Dim},\code{Dimnames}:] The dimension (a length-2] Underfull \hbox (badness 2478) in paragraph at lines 7736--7741 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/sl/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ sl/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 7744--7747 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2432] [2433] [2434] Underfull \hbox (badness 10000) in paragraph at lines 7968--7971 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2435] Underfull \hbox (badness 10000) in paragraph at lines 8029--8032 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2436] [2437] [2438] [2439] pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rpcent.* .Rpcent.}) has been already used, duplicate ignored \relax l.8310 ...*\%}{matmult-methods}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.crossprod }) has been already used, duplicate ignored \relax l.8384 ...A{crossprod}{matmult-methods}{crossprod} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.tcrosspro d}) has been already used, duplicate ignored \relax l.8460 ...tcrossprod}{matmult-methods}{tcrossprod} [2440] Underfull \hbox (badness 10000) in paragraph at lines 8618--8623 []\T1/zi4/m/sl/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 8618--8623 []\T1/zi4/m/sl/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 8627--8629 []\T1/zi4/m/sl/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/sl/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 8629--8631 []\T1/zi4/m/sl/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/sl/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2441] [2442] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.8856 \aliasA{det}{Matrix-class}{det} [2443] Underfull \hbox (badness 1527) in paragraph at lines 8933--8935 []\T1/zi4/m/sl/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/sl/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode Underfull \hbox (badness 4846) in paragraph at lines 8941--8944 []\T1/zi4/m/sl/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/sl/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 8946--8949 [2444] [2445] [2446] Underfull \hbox (badness 10000) in paragraph at lines 9148--9150 []\T1/zi4/m/sl/10 signature(x = "MatrixFactorization", logarithm = "missing")[] \T1/ptm/m/n/10 : sets Underfull \hbox (badness 10000) in paragraph at lines 9154--9156 []\T1/zi4/m/sl/10 signature(x = "MatrixFactorization", value = "NULL")[]\T1/ptm /m/n/10 : re-turns []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with Underfull \hbox (badness 10000) in paragraph at lines 9156--9158 []\T1/zi4/m/sl/10 signature(x = "MatrixFactorization", value = "list")[]\T1/ptm /m/n/10 : re-turns []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with [2447] Underfull \hbox (badness 10000) in paragraph at lines 9193--9196 []\T1/ptm/m/n/10 Generic func-tions [][][]\T1/zi4/m/sl/10 expand1[][][] []\T1/p tm/m/n/10 and [][][]\T1/zi4/m/sl/10 expand2[][][] []\T1/ptm/m/n/10 for con-stru ct-ing ma-trix fac-tors from [2448] Underfull \hbox (badness 10000) in paragraph at lines 9311--9313 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/sl/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/sl/10 X <- [2449] [2450] Underfull \vbox (badness 10000) has occurred while \output is active [2451] Underfull \hbox (badness 2478) in paragraph at lines 9507--9512 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/sl/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ sl/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 9515--9518 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2452] [2453] Underfull \hbox (badness 5924) in paragraph at lines 9696--9698 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2454] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.norm}) ha s been already used, duplicate ignored \relax l.9738 \aliasA{norm}{norm-methods}{norm} [2455] [2456] [2457] Underfull \hbox (badness 10000) in paragraph at lines 10031--10034 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2458] Underfull \hbox (badness 10000) in paragraph at lines 10095--10098 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2459] [2460] [2461] Underfull \hbox (badness 4242) in paragraph at lines 10295--10298 [][][]\T1/zi4/m/sl/10 pack[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 unp ack[][][][]\T1/ptm/m/n/10 ; its vir-tual "com-ple-ment" []\T1/zi4/m/sl/10 "[][] unpackedMatrix[][][]"[]\T1/ptm/m/n/10 ; its proper sub-classes [2462] Underfull \hbox (badness 3547) in paragraph at lines 10383--10386 []\T1/zi4/m/sl/10 signature(x = "pMatrix", y = "Matrix") []\T1/ptm/m/n/10 and o th-ers listed by []\T1/zi4/m/sl/10 showMethods("%*%", [2463] [2464] [2465] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.10601 \aliasA{qr}{qr-methods}{qr} [2466] [2467] [2468] [2469] Underfull \hbox (badness 7186) in paragraph at lines 10845--10851 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/sl/10 qr[][][](x, tol, [2470] [2471] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rcond}) h as been already used, duplicate ignored \relax l.11002 \aliasA{rcond}{rcond-methods}{rcond} [2472] [2473] [2474] [2475] Underfull \hbox (badness 2351) in paragraph at lines 11284--11292 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 11284--11292 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/sl/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/sl/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/sl/10 NULL[]\T1/ptm/m/n/10 --- [2476] [2477] Underfull \hbox (badness 10000) in paragraph at lines 11441--11444 []\T1/ptm/m/n/10 Class [][][]\T1/zi4/m/sl/10 SchurFactorization[][][][]\T1/ptm/ m/n/10 , di-rectly. Class [][][]\T1/zi4/m/sl/10 MatrixFactorization[][][][]\T1/ ptm/m/n/10 , by class [2478] [2479] [2480] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solve}) h as been already used, duplicate ignored \relax l.11630 \aliasA{solve}{solve-methods}{solve} [2481] Underfull \hbox (badness 5316) in paragraph at lines 11816--11821 []\T1/ptm/m/n/10 Methods for dense []\T1/zi4/m/sl/10 a []\T1/ptm/m/n/10 are bui lt on 14 LA-PACK rou-tines: class []\T1/zi4/m/sl/10 d..Matrix[]\T1/ptm/m/n/10 , where [2482] Underfull \hbox (badness 10000) in paragraph at lines 11916--11919 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame [2483] Underfull \hbox (badness 10000) in paragraph at lines 11952--11955 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 11963--11967 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2484] [2485] [2486] [2487] [2488] [2489] [2490] [2491] Underfull \hbox (badness 10000) in paragraph at lines 12500--12508 []\T1/zi4/m/sl/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 12500--12508 []\T1/zi4/m/sl/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/sl/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/sl/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 12525--12533 []\T1/zi4/m/sl/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 12525--12533 []\T1/zi4/m/sl/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2492] [2493] [2494] [2495] [2496] Underfull \hbox (badness 5036) in paragraph at lines 12918--12920 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2497] Underfull \hbox (badness 2828) in paragraph at lines 13084--13087 []\T1/zi4/m/sl/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 13106--13109 []\T1/zi4/m/sl/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/sl/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/sl/10 (x, times, [2498] [2499] [2500] [2501] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.[<.Rdash. }) has been already used, duplicate ignored \relax l.13311 ...\Rdash{}}{subassign-methods}{[<.Rdash.} Underfull \hbox (badness 6910) in paragraph at lines 13398--13400 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2502] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.[}) has b een already used, duplicate ignored \relax l.13445 \aliasA{[}{subscript-methods}{[} [2503] [2504] Underfull \hbox (badness 2057) in paragraph at lines 13656--13658 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., Underfull \hbox (badness 10000) in paragraph at lines 13670--13675 []\T1/zi4/m/sl/10 skewpart(x) []\T1/ptm/m/n/10 re-turns a skew-symmetric ma-tri x, in-her-it-ing from [][][]\T1/zi4/m/sl/10 generalMatrix[][][][]\T1/ptm/m/n/10 , [2505] [2506] Underfull \hbox (badness 10000) in paragraph at lines 13826--13831 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/sl/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/sl/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 13832--13838 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/sl/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 crossprod []\T1/ptm/m /n/10 are de-fined [2507] [2508] [2509] Overfull \hbox (21.75807pt too wide) in paragraph at lines 14021--14027 []\T1/ptm/m/n/10 GAL lat-tice file `\T1/zi4/m/sl/10 usc_q.GAL\T1/ptm/m/n/10 ' ( re-trieved in 2008 from `\T1/zi4/m/sl/10 http://sal.uiuc.edu/weights/zips/usc.z ip\T1/ptm/m/n/10 ' [2510] [2511] [2512]) (./boot-pkg.tex Chapter 18. [2513] [2514] [2515] [2516] [2517] [2518] [2519] [2520] [2521] [2522] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2523] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2524] Underfull \vbox (badness 10000) has occurred while \output is active [2525] [2526] [2527] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2528] [2529] [2530] [2531] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2532] [2533] [2534] [2535] [2536] [2537] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/sl/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2538] [2539] Underfull \vbox (badness 10000) has occurred while \output is active [2540] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2541] [2542] [2543] [2544] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2545] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2546] [2547] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /sl/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/sl/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/sl/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/sl/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2548] [2549] [2550] [2551] [2552] [2553] [2554] [2555] [2556] [2557] [2558] [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] [2569] [2570] [2571] [2572] [2573] [2574] [2575] [2576] [2577] [2578] [2579] [2580] [2581] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2582] [2583] [2584] [2585] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2586] [2587] [2588] [2589] [2590] [2591] [2592] [2593] [2594] [2595] [2596] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/sl/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2597] [2598] [2599] [2600] [2601] [2602] [2603] [2604] [2605] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2606] [2607] [2608] [2609] [2610] [2611] [2612] [2613] [2614] [2615]) (./class-pkg.tex [2616] Chapter 19. [2617] [2618] [2619] [2620] [2621] [2622] [2623] [2624] [2625] [2626] [2627] [2628] [2629] [2630] [2631] [2632]) (./cluster-pkg.tex Chapter 20. [2633] [2634] [2635] [2636] [2637] [2638] [2639] [2640] [2641] [2642] [2643] [2644] Underfull \hbox (badness 1412) in paragraph at lines 782--787 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/sl/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/sl/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2645] Underfull \hbox (badness 10000) in paragraph at lines 882--884 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2646] [2647] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2648] [2649] [2650] [2651] [2652] [2653] Underfull \hbox (badness 10000) in paragraph at lines 1474--1477 [2654] [2655] Underfull \hbox (badness 2503) in paragraph at lines 1583--1586 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/sl/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2656] Underfull \hbox (badness 4954) in paragraph at lines 1680--1682 []\T1/ptm/b/n/10 A\T1/ptm/m/n/10 symmetric bi-nary vari-able, aka []\T1/zi4/m/s l/10 "A" []\T1/ptm/m/n/10 in re-sult []\T1/zi4/m/sl/10 Types[]\T1/ptm/m/n/10 , see [2657] Underfull \hbox (badness 7667) in paragraph at lines 1694--1698 []\T1/ptm/b/n/10 I\T1/ptm/m/n/10 nterval scaled -- the \T1/ptm/b/n/10 de-fault \T1/ptm/m/n/10 for all nu-meric Underfull \hbox (badness 10000) in paragraph at lines 1694--1698 \T1/ptm/m/n/10 (incl []\T1/zi4/m/sl/10 integer[]\T1/ptm/m/n/10 ) columns of []\ T1/zi4/m/sl/10 x[]\T1/ptm/m/n/10 , aka []\T1/zi4/m/sl/10 "I" []\T1/ptm/m/n/10 i n re-sult []\T1/zi4/m/sl/10 Types[]\T1/ptm/m/n/10 , see [2658] [2659] Overfull \hbox (5.24408pt too wide) in paragraph at lines 1866--1866 []\T1/zi4/m/n/9 summary(dA123 <- daisy(flowerN)) # .. all 3 logicals treated * A*symmetric binary (w/ warning)[] Overfull \hbox (11.23795pt too wide) in paragraph at lines 1877--1877 []\T1/zi4/m/n/9 ## Still, using Euclidean/Manhattan distance for {0-1} *is* id entical to treating them as "N" :[] [2660] [2661] [2662] [2663] [2664] Underfull \hbox (badness 10000) in paragraph at lines 2212--2215 Underfull \hbox (badness 10000) in paragraph at lines 2223--2229 [][][]\T1/zi4/m/sl/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/sl/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/s l/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2665] [2666] [2667] [2668] Underfull \hbox (badness 6675) in paragraph at lines 2457--2459 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2669] [2670] [2671] [2672] [2673] [2674] [2675] [2676] Underfull \hbox (badness 2980) in paragraph at lines 3059--3063 [][][]\T1/zi4/m/sl/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/sl/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 partition.object[][][][]\T1/ptm/m/n/10 , [2677] [2678] [2679] [2680] [2681] [2682] Underfull \hbox (badness 1142) in paragraph at lines 3398--3401 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/sl/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2683] Underfull \hbox (badness 1142) in paragraph at lines 3517--3520 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/sl/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2684] [2685] [2686] [2687] Underfull \hbox (badness 2582) in paragraph at lines 3740--3745 [][][]\T1/zi4/m/sl/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/sl/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl /10 clara[][][][]\T1/ptm/m/n/10 , [2688] Underfull \hbox (badness 2698) in paragraph at lines 3802--3807 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/sl/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3802--3807 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/sl/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/sl/10 x x <- [2689] Underfull \hbox (badness 10000) in paragraph at lines 3875--3877 []\T1/ptm/m/n/10 Available as `\T1/zi4/m/sl/10 pluton.dat\T1/ptm/m/n/10 ' from the archive of the Uni-ver-sity of Antwer-pen, [2690] [2691] [2692] Underfull \hbox (badness 10000) in paragraph at lines 4089--4091 []\T1/ptm/m/n/10 a []\T1/zi4/m/sl/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/sl/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2693] [2694] [2695] [2696] Underfull \hbox (badness 2626) in paragraph at lines 4318--4323 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/sl/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/sl/10 col = [2697] Underfull \hbox (badness 1383) in paragraph at lines 4395--4400 []\T1/ptm/m/n/10 While []\T1/zi4/m/sl/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/sl/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2698] [2699] [2700] [2701] [2702] [2703] [2704] [2705] Underfull \hbox (badness 10000) in paragraph at lines 4836--4838 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/sl/10 xclara.dat\T1/ptm/m/n/10 ' in side [2706] [2707]) (./codetools-pkg.tex [2708] Chapter 21. [2709] [2710] [2711] [2712] [2713]) (./foreign-pkg.tex [2714] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/sl/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/sl/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/sl/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2715] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/sl/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2716] [2717] [2718] [2719] [2720] [2721] [2722] Underfull \hbox (badness 2846) in paragraph at lines 502--511 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 502--511 \T1/ptm/m/n/10 els. For []\T1/zi4/m/sl/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 502--511 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/sl/10 paste0(label, [2723] Overfull \hbox (6.73795pt too wide) in paragraph at lines 620--620 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2724] [2725] [2726] Underfull \hbox (badness 10000) in paragraph at lines 808--809 [2727] Underfull \hbox (badness 10000) in paragraph at lines 865--869 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 865--869 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/sl/10 https : Underfull \hbox (badness 10000) in paragraph at lines 865--869 \T1/zi4/m/sl/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 865--869 \T1/zi4/m/sl/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2728] [2729] Underfull \hbox (badness 10000) in paragraph at lines 986--988 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/sl/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2730] [2731] [2732] [2733] Underfull \hbox (badness 10000) in paragraph at lines 1265--1271 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/sl/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2734] [2735]) (./lattice-pkg.tex [2736] Chapter 23. [2737] Underfull \hbox (badness 1484) in paragraph at lines 114--118 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 114--118 \T1/zi4/m/sl/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2738] [2739] [2740] Underfull \vbox (badness 10000) has occurred while \output is active [2741] [2742] [2743] [2744] [2745] [2746] [2747] [2748] [2749] [2750] [2751] [2752] [2753] Underfull \hbox (badness 1062) in paragraph at lines 1395--1399 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2754] Underfull \vbox (badness 4805) has occurred while \output is active [2755] Underfull \hbox (badness 1803) in paragraph at lines 1563--1580 [][][]\T1/zi4/m/sl/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/sl/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1563--1580 [][][]\T1/zi4/m/sl/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/sl/10 strip.default[][][][]\T1/ptm/m/n/10 , [2756] [2757] Underfull \hbox (badness 3009) in paragraph at lines 1705--1707 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/sl/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1735--1739 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2758] [2759] [2760] [2761] [2762] [2763] Underfull \hbox (badness 10000) in paragraph at lines 2137--2140 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2764] [2765] [2766] [2767] [2768] [2769] [2770] [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] [2773] Underfull \hbox (badness 2781) in paragraph at lines 2871--2873 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/sl/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2774] Underfull \hbox (badness 2486) in paragraph at lines 3021--3025 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2775] [2776] [2777] [2778] [2779] [2780] [2781] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.parallel} ) has been already used, duplicate ignored \relax l.3506 \aliasA{parallel}{B\_08\_splom}{parallel} [2782] [2783] Underfull \hbox (badness 2368) in paragraph at lines 3644--3644 []\T1/zi4/m/sl/10 auto.key[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 prepanel[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 scales[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 strip[] \T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 groups[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 x lab[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 xlim[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/1 0 ylab[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 ylim[]\T1/ptm/m/n/10 , [2784] [2785] [2786] [2787] [2788] Underfull \hbox (badness 5696) in paragraph at lines 3992--3996 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3992--3996 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/sl/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3992--3996 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2789] [2790] [2791] Underfull \hbox (badness 1389) in paragraph at lines 4175--4183 \T1/ptm/m/n/10 based on HCL palettes, but cus-tomiza-tion of the palettes is al -lowed. Ear-lier be-haviour [2792] Underfull \hbox (badness 1173) in paragraph at lines 4251--4255 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in Underfull \hbox (badness 3219) in paragraph at lines 4278--4280 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2793] [2794] [2795] Underfull \hbox (badness 3492) in paragraph at lines 4478--4488 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/sl/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/sl/10 "plot.symbol"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4503--4506 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/sl/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4506--4508 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/sl/10 plot.polygon []\T1/ptm/m/n/10 and [2796] [2797] [2798] [2799] [2800] [2801] [2802] Underfull \vbox (badness 10000) has occurred while \output is active [2803] [2804] [2805] Underfull \hbox (badness 6157) in paragraph at lines 5232--5235 []\T1/zi4/m/sl/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/sl/10 print.shingle []\T1/ptm/m/n/10 and [2806] [2807] [2808] [2809] [2810] [2811] [2812] Underfull \hbox (badness 10000) in paragraph at lines 5684--5687 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5684--5687 []\T1/zi4/m/sl/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2813] [2814] [2815] [2816] [2817] Underfull \hbox (badness 4805) in paragraph at lines 6045--6049 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 6056--6063 []\T1/ptm/m/n/10 For []\T1/zi4/m/sl/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 6056--6063 []\T1/zi4/m/sl/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/sl/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 6056--6063 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/sl/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 6056--6063 []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 6056--6063 [][][]\T1/zi4/m/sl/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2818] [2819] [2820] [2821] Underfull \hbox (badness 4242) in paragraph at lines 6356--6361 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6356--6361 \T1/ptm/m/n/10 ter []\T1/zi4/m/sl/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2822] [2823] Underfull \hbox (badness 2310) in paragraph at lines 6472--6477 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/sl/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/sl/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2824] [2825] [2826] [2827] [2828] [2829] [2830] [2831] [2832] [2833] [2834] [2835] Underfull \hbox (badness 3168) in paragraph at lines 7330--7334 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2836] [2837] [2838] [2839] Underfull \hbox (badness 2012) in paragraph at lines 7601--7604 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2840] [2841] [2842] Underfull \hbox (badness 3333) in paragraph at lines 7808--7810 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/sl/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 plot.line []\T1/ptm/m/n/10 us-ing Underfull \hbox (badness 2318) in paragraph at lines 7836--7844 []\T1/zi4/m/sl/10 "spline" []\T1/ptm/m/n/10 adds a cu-bic smooth-ing spline fit (same as [][][]\T1/zi4/m/sl/10 panel.spline[][][][]\T1/ptm/m/n/10 ). [2843] [2844] [2845] [2846] [2847] [2848] [2849] Underfull \hbox (badness 1436) in paragraph at lines 8309--8315 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2850] [2851] [2852] [2853] [2854] [2855] [2856] [2857] Underfull \hbox (badness 10000) in paragraph at lines 8878--8881 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/sl/10 panel.supe rpose []\T1/ptm/m/n/10 from Underfull \hbox (badness 1092) in paragraph at lines 8924--8926 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/sl/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/sl/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2858] [2859] [2860] Underfull \hbox (badness 3895) in paragraph at lines 9085--9088 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/sl/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in Underfull \hbox (badness 6625) in paragraph at lines 9095--9095 []\T1/zi4/m/sl/10 perspective[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 distance[]\T1 /ptm/m/n/10 , []\T1/zi4/m/sl/10 xlim[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 ylim[] \T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 zlim[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 scr een[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 R.mat[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/ 10 aspect[]\T1/ptm/m/n/10 , [2861] Underfull \hbox (badness 1515) in paragraph at lines 9160--9164 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2862] Underfull \hbox (badness 6316) in paragraph at lines 9266--9271 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in [2863] Underfull \hbox (badness 5908) in paragraph at lines 9283--9286 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/sl/10 xscale .components.default []\T1/ptm/m/n/10 and [2864] [2865] [2866] [2867] Underfull \hbox (badness 2418) in paragraph at lines 9574--9578 []\T1/ptm/m/n/10 returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/sl/10 left, right, left.name, right.name, [2868] [2869] [2870] [2871] [2872] [2873] [2874] Underfull \hbox (badness 2310) in paragraph at lines 10018--10022 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/sl/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/s l/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 10023--10026 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/sl/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/sl/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Morris"[]\T1/ptm/m/n/10 , [2875] [2876] [2877] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma} ) has been already used, duplicate ignored \relax l.10249 \aliasA{melanoma}{H\_melanoma}{melanoma} [2878] [2879] [2880] Underfull \hbox (badness 4144) in paragraph at lines 10473--10476 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10473--10476 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/sl /10 https : / / ruralhealth . und . edu / projects / [2881] [2882]) (./mgcv-pkg.tex Chapter 24. [2883] [2884] [2885] Underfull \hbox (badness 1142) in paragraph at lines 185--189 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 210--215 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2886] [2887] [2888] [2889] Underfull \hbox (badness 10000) in paragraph at lines 379--386 [][][]\T1/zi4/m/sl/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/sl/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 379--386 [][][]\T1/zi4/m/sl/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/sl/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/sl/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/sl/10 gam.side[][][][]\T1/ptm/m/n/10 , [2890] [2891] [2892] [2893] [2894] [2895] Underfull \hbox (badness 1406) in paragraph at lines 704--705 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2896] [2897] Underfull \hbox (badness 1158) in paragraph at lines 814--816 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion [2898] Underfull \hbox (badness 1259) in paragraph at lines 877--878 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2899] Underfull \vbox (badness 10000) has occurred while \output is active [2900] [2901] [2902] [2903] [2904] [2905] Underfull \hbox (badness 1281) in paragraph at lines 1272--1273 []\T1/zi4/m/sl/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/sl/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/sl/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/sl/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2906] [2907] Underfull \vbox (badness 10000) has occurred while \output is active [2908] Underfull \vbox (badness 10000) has occurred while \output is active [2909] [2910] Underfull \vbox (badness 10000) has occurred while \output is active [2911] [2912] [2913] [2914] [2915] [2916] [2917] [2918] [2919] [2920] [2921] [2922] [2923] [2924] [2925] [2926] [2927] [2928] Underfull \hbox (badness 1142) in paragraph at lines 2604--2608 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2929] Underfull \hbox (badness 1043) in paragraph at lines 2630--2636 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2930] [2931] [2932] [2933] [2934] [2935] Underfull \vbox (badness 10000) has occurred while \output is active [2936] Underfull \vbox (badness 10000) has occurred while \output is active [2937] [2938] [2939] [2940] [2941] [2942] [2943] [2944] [2945] [2946] [2947] [2948] [2949] [2950] [2951] [2952] [2953] Underfull \hbox (badness 10000) in paragraph at lines 4071--4075 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/sl/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/sl/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2954] [2955] Underfull \vbox (badness 10000) has occurred while \output is active [2956] [2957] [2958] Underfull \hbox (badness 1184) in paragraph at lines 4358--4362 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2959] [2960] [2961] [2962] [2963] [2964] [2965] [2966] [2967] [2968] [2969] [2970] Underfull \hbox (badness 1142) in paragraph at lines 5081--5085 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2971] Underfull \hbox (badness 1231) in paragraph at lines 5185--5187 []\T1/zi4/m/sl/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/sl/10 gam []\T1/ptm/m/n/10 wit h [2972] [2973] [2974] Underfull \vbox (badness 10000) has occurred while \output is active [2975] [2976] [2977] [2978] Underfull \hbox (badness 2181) in paragraph at lines 5626--5627 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2979] [2980] [2981] [2982] [2983] [2984] [2985] [2986] [2987] Underfull \hbox (badness 10000) in paragraph at lines 6130--6131 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/sl/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2988] [2989] [2990] [2991] [2992] [2993] [2994] [2995] [2996] [2997] [2998] Underfull \hbox (badness 1142) in paragraph at lines 6715--6719 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2999] [3000] [3001] Underfull \vbox (badness 10000) has occurred while \output is active [3002] [3003] [3004] [3005] Underfull \hbox (badness 1087) in paragraph at lines 7087--7088 []\T1/ptm/m/n/10 If []\T1/zi4/m/sl/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [3006] [3007] [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] Underfull \vbox (badness 10000) has occurred while \output is active [3010] [3011] [3012] [3013] [3014] [3015] [3016] [3017] [3018] [3019] [3020] [3021] Underfull \hbox (badness 1242) in paragraph at lines 8046--8047 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [3022] Underfull \hbox (badness 1122) in paragraph at lines 8072--8073 []\T1/ptm/m/n/10 When us-ing [][][]\T1/zi4/m/sl/10 NCV[][][] []\T1/ptm/m/n/10 w ith [][][]\T1/zi4/m/sl/10 gam[][][] []\T1/ptm/m/n/10 worth-while per-for-mance im-prove-ments are avail-able by set-ting [3023] [3024] [3025] [3026] [3027] [3028] [3029] [3030] [3031] [3032] [3033] [3034] [3035] Underfull \hbox (badness 6001) in paragraph at lines 8785--8787 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/sl/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [3036] [3037] [3038] [3039] [3040] [3041] [3042] [3043] [3044] [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] [3047] Underfull \hbox (badness 1038) in paragraph at lines 9533--9536 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/sl/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9533--9536 []\T1/zi4/m/sl/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [3048] Underfull \hbox (badness 10000) in paragraph at lines 9589--9592 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/sl/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/sl/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [3049] [3050] [3051] [3052] [3053] [3054] [3055] [3056] [3057] [3058] [3059] Underfull \hbox (badness 1852) in paragraph at lines 10261--10264 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/sl/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/sl/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/sl/10 "para.only" []\T1/ptm/m/n/10 and [3060] [3061] [3062] Underfull \hbox (badness 1852) in paragraph at lines 10430--10433 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/sl/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/sl/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/sl/10 "para.only" []\T1/ptm/m/n/10 and [3063] [3064] Underfull \vbox (badness 10000) has occurred while \output is active [3065] [3066] Underfull \hbox (badness 1205) in paragraph at lines 10670--10671 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10670--10671 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10676--10681 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3067] Underfull \hbox (badness 1205) in paragraph at lines 10760--10761 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10760--10761 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [3068] [3069] [3070] Underfull \hbox (badness 1253) in paragraph at lines 10959--10961 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [3071] [3072] [3073] [3074] [3075] [3076] Underfull \hbox (badness 4792) in paragraph at lines 11220--11223 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/s l/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/sl/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 11220--11223 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/sl/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [3077] Underfull \hbox (badness 10000) in paragraph at lines 11327--11330 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/sl /10 "deviance"[]\T1/ptm/m/n/10 , [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090] [3091] Underfull \hbox (badness 3861) in paragraph at lines 12118--12121 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3092] [3093] Underfull \hbox (badness 1320) in paragraph at lines 12233--12238 \T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/sl/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3094] Underfull \hbox (badness 1975) in paragraph at lines 12339--12344 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3095] [3096] Underfull \hbox (badness 1762) in paragraph at lines 12428--12440 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/sl/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/sl/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3097] [3098] [3099] Underfull \hbox (badness 7667) in paragraph at lines 12640--12646 [][][]\T1/zi4/m/sl/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3100] Underfull \hbox (badness 10000) in paragraph at lines 12681--12682 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3101] [3102] [3103] [3104] Underfull \vbox (badness 10000) has occurred while \output is active [3105] Underfull \hbox (badness 10000) in paragraph at lines 12958--12960 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3106] [3107] Underfull \hbox (badness 10000) in paragraph at lines 13088--13089 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3108] [3109] [3110] Underfull \hbox (badness 1436) in paragraph at lines 13224--13231 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/sl/10 gamm []\T1/ptm/m/n/10 only al-lows one [3111] [3112] Underfull \hbox (badness 10000) in paragraph at lines 13323--13324 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] Underfull \hbox (badness 10000) in paragraph at lines 13924--13930 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13924--13930 []\T1/zi4/m/sl/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/sl/10 gam []\T1/ptm/m/n/10 for-mula. Note [3123] [3124] [3125] Underfull \vbox (badness 10000) has occurred while \output is active [3126] Underfull \vbox (badness 10000) has occurred while \output is active [3127] [3128] Underfull \hbox (badness 10000) in paragraph at lines 14268--14269 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3129] [3130] [3131] [3132] Overfull \hbox (35.26862pt too wide) in paragraph at lines 14480--14480 []\T1/zi4/m/n/9 b <- gam(y ~ s(x)+s(f1,x,bs="sz")+s(f2,x,bs="sz")+s(f1,f2,x,bs ="sz",id=1),data=dat,method="REML")[] [3133] [3134] Underfull \hbox (badness 3895) in paragraph at lines 14626--14629 [][][]\T1/zi4/m/sl/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3135] Underfull \hbox (badness 10000) in paragraph at lines 14671--14673 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3136] [3137] [3138] [3139] [3140] Underfull \hbox (badness 1371) in paragraph at lines 14951--14957 []\T1/zi4/m/sl/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14962--14964 []\T1/zi4/m/sl/10 bs="fs" []\T1/ptm/m/n/10 A spe-cial smoother class (see Underfull \hbox (badness 1132) in paragraph at lines 14962--14964 [][][]\T1/zi4/m/sl/10 smooth.construct.fs.smooth.spec[][][][]\T1/ptm/m/n/10 ) i s avail-able for the case in which a smooth is [3141] Underfull \hbox (badness 6461) in paragraph at lines 14996--15000 [][][]\T1/zi4/m/sl/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 t2[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 tprs[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Duchon.spline[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 cubic.regression.spline[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/sl/10 p.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4 /m/sl/10 d.spline[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14996--15000 [][][]\T1/zi4/m/sl/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14996--15000 [][][]\T1/zi4/m/sl/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/sl/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 , [3142] [3143] [3144] [3145] Underfull \hbox (badness 2326) in paragraph at lines 15200--15207 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/sl/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3146] Underfull \hbox (badness 2158) in paragraph at lines 15285--15285 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3147] [3148] [3149] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] Underfull \vbox (badness 10000) has occurred while \output is active [3158] [3159] [3160] [3161] [3162] [3163] [3164] [3165] [3166] [3167] [3168] [3169] [3170] [3171] Overfull \hbox (21.42029pt too wide) in paragraph at lines 16847--16847 []\T1/zi4/m/sl/10 vcov(object, sandwich=FALSE, freq = FALSE, dispersion = NULL ,unconditional=FALSE, ...)[] [3172] [3173] [3174] Underfull \hbox (badness 1796) in paragraph at lines 16960--16963 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/sl/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/sl/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3175] [3176] [3177] [3178] [3179] [3180] [3181] [3182] [3183]) (./nlme-pkg.tex [3184] Chapter 25. [3185] [3186] [3187] [3188] [3189] [3190] [3191] [3192] [3193] [3194] [3195] [3196] [3197] [3198] [3199] [3200] [3201] [3202] [3203] [3204] [3205] [3206] [3207] [3208] [3209] [3210] [3211] [3212] [3213] [3214] [3215] [3216] [3217] [3218] Underfull \hbox (badness 10000) in paragraph at lines 2252--2258 [][][]\T1/zi4/m/sl/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/sl/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3219] [3220] [3221] [3222] [3223] [3224] [3225] [3226] [3227] [3228] [3229] [3230] [3231] [3232] [3233 pdfTeX warning (ext4): destination with the same identifier (name{Rfn.corMatrix .corCompSymm}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.3186 ] [3234] [3235] [3236] [3237] [3238] [3239] [3240] [3241] [3242] [3243] [3244] [3245] [3246] [3247] [3248] [3249] [3250] [3251] Underfull \hbox (badness 1067) in paragraph at lines 4411--4416 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/sl/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/sl/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3252] [3253] [3254] [3255] [3256] [3257] [3258] [3259] [3260] [3261] [3262] [3263] Underfull \hbox (badness 10000) in paragraph at lines 5157--5161 [][][]\T1/zi4/m/sl/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/sl/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3264] [3265] [3266] [3267] [3268] [3269] [3270] Underfull \hbox (badness 10000) in paragraph at lines 5591--5594 [][][]\T1/zi4/m/sl/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3271] [3272] [3273] [3274] [3275] [3276] [3277] Underfull \hbox (badness 10000) in paragraph at lines 5972--5977 [][][]\T1/zi4/m/sl/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3278] [3279] [3280] [3281] Underfull \hbox (badness 1490) in paragraph at lines 6247--6258 [][][]\T1/zi4/m/sl/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/sl/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3282] Underfull \hbox (badness 10000) in paragraph at lines 6311--6313 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3283] [3284] [3285] [3286] [3287] [3288] Underfull \hbox (badness 10000) in paragraph at lines 6720--6722 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3289] [3290] [3291] [3292] Underfull \hbox (badness 10000) in paragraph at lines 6989--6996 [][][]\T1/zi4/m/sl/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/sl/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3293] [3294] [3295] [3296] Underfull \hbox (badness 10000) in paragraph at lines 7249--7254 [][][]\T1/zi4/m/sl/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] [3308] [3309] [3310] [3311] [3312] [3313] [3314] [3315] Underfull \hbox (badness 10000) in paragraph at lines 8531--8533 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3316] [3317] [3318] [3319] [3320] Underfull \hbox (badness 10000) in paragraph at lines 8816--8823 [][][]\T1/zi4/m/sl/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3321] [3322] [3323] [3324] [3325] [3326] [3327] [3328] Underfull \hbox (badness 10000) in paragraph at lines 9337--9344 [][][]\T1/zi4/m/sl/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/sl/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/sl/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3329] [3330] [3331] [3332] [3333] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9699 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix.1} ) has been already used, duplicate ignored \relax l.9699 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3334] [3335] [3336] [3337] [3338] [3339] [3340] [3341] [3342] [3343] [3344] [3345] Underfull \hbox (badness 1596) in paragraph at lines 10476--10502 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3346] [3347] Underfull \hbox (badness 1490) in paragraph at lines 10592--10598 [][][]\T1/zi4/m/sl/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/sl/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 reStruct[][][][]\T1/ptm/m/n/10 , [3348] [3349] [3350] Underfull \hbox (badness 10000) in paragraph at lines 10833--10835 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3351] [3352] [3353] [3354] [3355] [3356] [3357] [3358] [3359] [3360] [3361] [3362] [3363] [3364] [3365] [3366] [3367] [3368] [3369] [3370] [3371] [3372] [3373] [3374] [3375] [3376] [3377] [3378] [3379] [3380] [3381] [3382] [3383] [3384] [3385] [3386] [3387] [3388] [3389] [3390] [3391] [3392] [3393] Underfull \hbox (badness 1286) in paragraph at lines 13736--13743 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ sl/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/sl/10 inner []\T1/ptm/m/n/1 0 or [3394] [3395] [3396] [3397] [3398] [3399] [3400] [3401] [3402] [3403] [3404] [3405] [3406] [3407] [3408] [3409] [3410] [3411] [3412] [3413] [3414] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects}) has been already used, duplicate ignored \relax l.15179 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects.1}) has been already used, duplicate ignored \relax l.15179 ...Extract Random Effects}{random.effects} [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] [3423] [3424] [3425] [3426] Underfull \hbox (badness 1067) in paragraph at lines 15932--15937 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/sl/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/sl/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3427] [3428] [3429] [3430] Underfull \hbox (badness 1448) in paragraph at lines 16175--16184 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/sl/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3431] [3432] [3433] [3434] [3435] [3436] [3437] [3438] [3439] [3440] Underfull \hbox (badness 1728) in paragraph at lines 16878--16881 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3441] [3442] [3443] [3444] Underfull \hbox (badness 8056) in paragraph at lines 17212--17221 \T1/zi4/m/sl/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17212--17221 \T1/zi4/m/sl/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17212--17221 \T1/zi4/m/sl/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3445] [3446] [3447] [3448] [3449] Underfull \hbox (badness 10000) in paragraph at lines 17534--17542 [][][]\T1/zi4/m/sl/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varPower[][][][]\T1/ptm/m/n/10 , [3450] [3451] [3452] [3453] [3454] [3455] [3456] [3457] [3458] [3459] [3460] Underfull \hbox (badness 10000) in paragraph at lines 18244--18254 [][][]\T1/zi4/m/sl/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18244--18254 [][][]\T1/zi4/m/sl/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3461] [3462] [3463] [3464] [3465] Underfull \hbox (badness 5036) in paragraph at lines 18568--18577 [][][]\T1/zi4/m/sl/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3466] [3467] [3468] [3469] [3470] [3471] [3472] [3473] [3474] [3475] [3476] [3477] [3478]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom. 1}) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3479] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [3480] [3481] [3482] [3483] [3484] [3485] [3486]) (./rpart-pkg.tex Chapter 27. [3487] [3488] [3489] [3490] [3491] [3492] [3493] [3494] [3495] [3496] Underfull \hbox (badness 10000) in paragraph at lines 771--775 []\T1/ptm/m/n/10 Logical. If []\T1/zi4/m/sl/10 TRUE []\T1/ptm/m/n/10 (de-fault) , adds to the la-bel Underfull \hbox (badness 1348) in paragraph at lines 771--775 \T1/zi4/m/sl/10 #events level1/ #events level2/ \T1/ptm/m/n/10 etc. for method []\T1/zi4/m/sl/10 class[]\T1/ptm/m/n/10 , \T1/zi4/m/sl/10 n \T1/ptm/m/n/10 for [3497] [3498] [3499] [3500] [3501] [3502] [3503] [3504] [3505] [3506] [3507] [3508] [3509] [3510] [3511] [3512] [3513] [3514] [3515]) (./spatial-pkg.tex [3516] Chapter 28. [3517] [3518] [3519] [3520] [3521] [3522] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3523] [3524] [3525] [3526] [3527] [3528] [3529] [3530] [3531] [3532] [3533] [3534] [3535]) (./survival-pkg.tex [3536] Chapter 29. [3537] [3538] [3539] [3540] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3541] [3542] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml.1}) h as been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3543] [3544] [3545] [3546] [3547] [3548] [3549] [3550] [3551] [3552] [3553] [3554] Underfull \hbox (badness 1097) in paragraph at lines 1205--1207 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3555] [3556] [3557] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) h as been already used, duplicate ignored \relax l.1407 ...erapy for Stage B/C colon cancer}{colon} [3558] Underfull \hbox (badness 3679) in paragraph at lines 1455--1459 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/sl/10 table(colon$nodes, [3559] [3560] [3561] [3562] [3563] [3564] [3565] [3566] [3567] [3568] Underfull \hbox (badness 3250) in paragraph at lines 2143--2158 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/sl/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 2143--2158 []\T1/zi4/m/sl/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3569] [3570] [3571] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] Underfull \hbox (badness 1389) in paragraph at lines 3663--3665 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3591] [3592] [3593] [3594] Overfull \hbox (467.89665pt too wide) in alignment at lines 3949--3949 [] [] [3595] [3596] [3597] [3598] [3599] [3600] [3601] [3602] [3603] [3604] [3605] [3606] [3607] [3608] [3609] [3610] [3611] [3612] [3613] [3614] [3615] [3616] [3617] [3618] [3619] [3620] Underfull \hbox (badness 5274) in paragraph at lines 5718--5720 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/sl/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3621] [3622] [3623] [3624] [3625] [3626] [3627] [3628] [3629] [3630] [3631] [3632] [3633] [3634] [3635] [3636] [3637] [3638] Underfull \hbox (badness 1281) in paragraph at lines 6986--6989 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/sl/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "dfbeta"[]\T1/ptm/m/n/10 , [3639] [3640] [3641] [3642] [3643] [3644] [3645] [3646] [3647] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solder}) has been already used, duplicate ignored \relax l.7569 ...ata from a soldering experiment}{solder} [3648] [3649] [3650] [3651] [3652] [3653] [3654] [3655] [3656] [3657] [3658] [3659] [3660] [3661] [3662] [3663] [3664] [3665] [3666] [3667] [3668] [3669] [3670] Underfull \hbox (badness 1038) in paragraph at lines 9202--9208 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3671] [3672] [3673] [3674] [3675] Underfull \hbox (badness 10000) in paragraph at lines 9560--9565 [][][]\T1/zi4/m/sl/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3676] [3677] [3678] [3679] [3680] Underfull \hbox (badness 4441) in paragraph at lines 9950--9960 []\T1/ptm/m/n/10 by de-fault, the surv-fit rou-tines only re-turn in-for-ma-tio n at the [3681] [3682] Underfull \hbox (badness 1490) in paragraph at lines 10125--10134 [][][]\T1/zi4/m/sl/10 survfit.coxph[][][] []\T1/ptm/m/n/10 for sur-vival curves from Cox mod-els, [][][]\T1/zi4/m/sl/10 survfit.object[][][] []\T1/ptm/m/n/10 for a de-scrip-tion Underfull \hbox (badness 2213) in paragraph at lines 10125--10134 \T1/ptm/m/n/10 of the com-po-nents of a surv-fit ob-ject, [][][]\T1/zi4/m/sl/10 print.survfit[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.survfit[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 lines.survfit[][][][]\T1/ptm/m/n/10 , [3683] [3684] [3685] [3686] [3687] [3688] [3689] Underfull \hbox (badness 1354) in paragraph at lines 10623--10627 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. It gives th e time range [3690] [3691] [3692] [3693] [3694] [3695] [3696] [3697] [3698] [3699] [3700] [3701] [3702] [3703] [3704] [3705] [3706] [3707] [3708] [3709] [3710] [3711] [3712] [3713]) [3714] (./fullrefman.ind [3715] [3716] [3717] [3718] [3719] [3720] [3721] [3722] [3723] [3724] [3725] [3726] [3727] [3728] [3729] [3730] [3731] [3732] [3733] [3734] [3735] [3736] [3737] [3738] [3739] [3740] [3741] Overfull \hbox (8.3567pt too wide) in paragraph at lines 2898--2900 []| \T1/zi4/m/it/10 smooth.construct.tensor.smooth.spec\T1/ptm/m/n/10 , [3742] [3743] [3744] [3745] [3746] [3747] [3748] Overfull \hbox (8.3567pt too wide) in paragraph at lines 3550--3552 []| \T1/zi4/m/it/10 smooth.construct.tensor.smooth.spec\T1/ptm/m/n/10 , [3749] [3750] [3751] [3752] [3753] [3754] [3755] [3756] [3757] [3758] [3759] Overfull \hbox (5.8567pt too wide) in paragraph at lines 4955--4957 []\T1/zi4/m/it/10 [,Matrix,lMatrix,missing,missing-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 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wide) in paragraph at lines 5497--5499 []\T1/zi4/m/it/10 %&%,RsparseMatrix,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 5499--5501 []\T1/zi4/m/it/10 %&%,RsparseMatrix,TsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5503--5505 []\T1/zi4/m/it/10 %&%,RsparseMatrix,diagonalMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 5509--5511 []\T1/zi4/m/it/10 %&%,TsparseMatrix,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 5511--5513 []\T1/zi4/m/it/10 %&%,TsparseMatrix,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 5513--5515 []\T1/zi4/m/it/10 %&%,TsparseMatrix,TsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5517--5519 []\T1/zi4/m/it/10 %&%,TsparseMatrix,diagonalMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5537--5539 []\T1/zi4/m/it/10 %&%,diagonalMatrix,CsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5539--5541 []\T1/zi4/m/it/10 %&%,diagonalMatrix,RsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5541--5543 []\T1/zi4/m/it/10 %&%,diagonalMatrix,TsparseMatrix-method [3764] Overfull \hbox (10.8567pt too wide) in paragraph at lines 5545--5547 []\T1/zi4/m/it/10 %&%,diagonalMatrix,diagonalMatrix-method [3765] Overfull \hbox (15.01662pt too wide) in paragraph at lines 5815--5817 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ad.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3766] Overfull \hbox (20.8567pt too wide) in paragraph at lines 5969--5971 []\T1/zi4/m/it/10 all.equal,sparseVector,sparseVector-method [3767] Overfull \hbox (10.8567pt too wide) in paragraph at lines 6222--6224 []\T1/zi4/m/it/10 Arith,CsparseMatrix,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 6230--6232 []\T1/zi4/m/it/10 Arith,ddenseMatrix,sparseVector-method [3768] Overfull \hbox (10.8567pt too wide) in paragraph at lines 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(15.01662pt too wide) in paragraph at lines 7031--7033 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3772] [3773] [3774] [3775] [3776] [3777] [3778] [3779] Overfull \hbox (30.8567pt too wide) in paragraph at lines 8535--8537 []\T1/zi4/m/it/10 coerce,diagonalMatrix,symmetricMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 8537--8539 []\T1/zi4/m/it/10 coerce,diagonalMatrix,triangularMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8557--8559 []\T1/zi4/m/it/10 coerce,generalMatrix,packedMatrix-method [3780] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8703--8705 []\T1/zi4/m/it/10 coerce,matrix.coo,CsparseMatrix-method [3781] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8711--8713 []\T1/zi4/m/it/10 coerce,matrix.coo,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8715--8717 []\T1/zi4/m/it/10 coerce,matrix.coo,TsparseMatrix-method Overfull 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coerce,sparseVector,TsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8787--8789 []\T1/zi4/m/it/10 coerce,sparseVector,unpackedMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8789--8791 []\T1/zi4/m/it/10 coerce,sparseVector,zsparseVector-method [3782] Overfull \hbox (20.8567pt too wide) in paragraph at lines 8963--8965 []\T1/zi4/m/it/10 Compare,CsparseMatrix,CsparseMatrix-method [3783] Overfull \hbox (40.8567pt too wide) in paragraph at lines 8995--8997 []\T1/zi4/m/it/10 Compare,triangularMatrix,diagonalMatrix-method [3784] [3785] Overfull \hbox (30.8567pt too wide) in paragraph at lines 9532--9534 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,CsparseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 9534--9536 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,denseMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 9536--9538 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,diagonalMatrix-method Overfull \hbox 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crossprod,denseMatrix,TsparseMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 9564--9566 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,CsparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 9566--9568 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,denseMatrix-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 9568--9570 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,diagonalMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9570--9572 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,matrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 9572--9574 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,missing-method [3786] Overfull \hbox (35.8567pt too wide) in paragraph at lines 9574--9576 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,RsparseMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 9576--9578 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) 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crossprod,vector,diagonalMatrix-method [3787] Overfull \hbox (15.01662pt too wide) in paragraph at lines 9711--9713 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.cr.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 9775--9777 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.cr.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 9780--9782 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ps.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 9789--9791 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3788] Overfull \hbox (5.8567pt too wide) in paragraph at lines 10150--10152 []\T1/zi4/m/it/10 determinant,BunchKaufman,logical-method [3789] Overfull \hbox (15.8567pt too wide) in paragraph at lines 10166--10168 []\T1/zi4/m/it/10 determinant,diagonalMatrix,logical-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 10188--10190 []\T1/zi4/m/it/10 determinant,MatrixFactorization,missing-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 10190--10192 []\T1/zi4/m/it/10 determinant,pBunchKaufman,logical-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10202--10204 []\T1/zi4/m/it/10 determinant,triangularMatrix,logical-method [3790] [3791] Overfull \hbox (20.8567pt too wide) in paragraph at lines 10580--10582 []\T1/zi4/m/it/10 dimnames<-,MatrixFactorization,list-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 10582--10584 []\T1/zi4/m/it/10 dimnames<-,MatrixFactorization,NULL-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 10584--10586 []\T1/zi4/m/it/10 dimnames<-,symmetricMatrix,list-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 10586--10588 []\T1/zi4/m/it/10 dimnames<-,symmetricMatrix,NULL-method [3792] Overfull \hbox (15.01662pt too wide) in paragraph at lines 10935--10937 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ds.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3793] [3794] [3795] [3796] [3797] Overfull \hbox (35.8567pt too wide) in paragraph at lines 11910--11912 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,character-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 11912--11914 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,missing-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 11914--11916 []\T1/zi4/m/it/10 forceSymmetric,denseMatrix,character-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 11916--11918 []\T1/zi4/m/it/10 forceSymmetric,denseMatrix,missing-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 11918--11920 []\T1/zi4/m/it/10 forceSymmetric,diagonalMatrix,character-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 11920--11922 []\T1/zi4/m/it/10 forceSymmetric,diagonalMatrix,missing-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 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First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9327--9339 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] Underfull \hbox (badness 1178) in paragraph at lines 10193--10197 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] Underfull \hbox (badness 2744) in paragraph at lines 12533--12535 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [181] [182] [183] [184] [185] [186] [187] Underfull \vbox (badness 10000) has occurred while \output is active [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] Underfull \hbox (badness 2253) in paragraph at lines 14737--14739 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see Underfull \hbox (badness 1490) in paragraph at lines 14772--14775 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [211] Underfull \hbox (badness 1565) in paragraph at lines 14854--14858 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [212] Underfull \hbox (badness 4927) in paragraph at lines 14905--14907 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [213] [214] Underfull \hbox (badness 1466) in paragraph at lines 15056--15059 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [215] Underfull \vbox (badness 1418) has occurred while \output is active [216] Underfull \hbox (badness 10000) in paragraph at lines 15187--15191 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15198--15201 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [217] [218] [219] [220] Underfull \hbox (badness 3965) in paragraph at lines 15493--15497 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [221] [222] [223] [224] [225] [226] [227] [228] Underfull \hbox (badness 5260) in paragraph at lines 15995--15995 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [229] [230] [231] [232] Underfull \hbox (badness 4429) in paragraph at lines 16285--16288 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [233] Underfull \hbox (badness 10000) in paragraph at lines 16392--16394 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [234] Underfull \hbox (badness 2035) in paragraph at lines 16465--16469 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [235] [236] [237] [238] [239] [240] [241] [242] [243] [244] Underfull \hbox (badness 2452) in paragraph at lines 17088--17092 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17088--17092 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [245] [246] Underfull \hbox (badness 1092) in paragraph at lines 17262--17267 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [247] [248] [249] [250] Underfull \hbox (badness 6741) in paragraph at lines 17515--17519 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [251] [252] [253] Underfull \vbox (badness 10000) has occurred while \output is active [254] [255] [256] [257] [258] [259] [260] Underfull \vbox (badness 10000) has occurred while \output is active [261] Underfull \vbox (badness 10000) has occurred while \output is active [262] [263] [264] [265] [266] [267] [268] [269] [270] [271] Underfull \hbox (badness 1769) in paragraph at lines 18988--18991 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [272] [273] [274] [275] Underfull \hbox (badness 10000) in paragraph at lines 19297--19299 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19303--19312 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [276] [277] [278] [279] [280] [281] [282] [283] [284] Underfull \hbox (badness 1442) in paragraph at lines 19911--19913 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [285] Underfull \hbox (badness 2452) in paragraph at lines 20007--20033 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20007--20033 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [286] [287] [288] [289] [290] [291] Underfull \hbox (badness 1248) in paragraph at lines 20405--20408 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [292] [293] [294] [295] Underfull \hbox (badness 4739) in paragraph at lines 20672--20674 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [296] [297] [298] [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] [309] [310] [311] [312] Underfull \hbox (badness 2469) in paragraph at lines 21830--21835 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [313] Underfull \hbox (badness 1675) in paragraph at lines 21917--21926 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , [314] Underfull \hbox (badness 3189) in paragraph at lines 21927--21940 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 21975--21978 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21975--21978 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [315] [316] Underfull \hbox (badness 1014) in paragraph at lines 22109--22114 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [317] [318] [319] [320] [321] [322] [323] [324] [325] [326] [327] [328] Underfull \hbox (badness 1264) in paragraph at lines 22956--22964 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [329] Underfull \hbox (badness 4441) in paragraph at lines 22991--22994 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] [340] Underfull \hbox (badness 5231) in paragraph at lines 23809--23811 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [341] [342] [343] [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] [357] Underfull \hbox (badness 6380) in paragraph at lines 24919--24925 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 24919--24925 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [358] [359] [360] [361] [362] [363] [364] [365] Underfull \hbox (badness 2790) in paragraph at lines 25432--25435 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25432--25435 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [366] [367] [368] [369] Underfull \hbox (badness 1194) in paragraph at lines 25760--25763 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [370] [371] [372] Underfull \hbox (badness 2368) in paragraph at lines 25967--25973 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [373] [374] [375] [376] [377] [378] Underfull \hbox (badness 10000) in paragraph at lines 26357--26360 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 10000) in paragraph at lines 26985--26987 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [388] [389] [390] [391] [392] [393] [394] Underfull \hbox (badness 2443) in paragraph at lines 27476--27484 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [395] [396] [397] [398] [399] [400] Underfull \hbox (badness 1881) in paragraph at lines 27906--27909 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are [401] Underfull \hbox (badness 6220) in paragraph at lines 27931--27933 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [402] Underfull \hbox (badness 2142) in paragraph at lines 28072--28076 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able [403] Underfull \hbox (badness 1968) in paragraph at lines 28129--28134 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [404] [405] [406] Underfull \hbox (badness 10000) in paragraph at lines 28425--28431 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28425--28431 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28425--28431 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28438--28441 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28464--28466 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [407] Underfull \hbox (badness 10000) in paragraph at lines 28510--28515 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28516--28527 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28516--28527 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28528--28531 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [408] [409] [410] [411] [412] Underfull \hbox (badness 10000) in paragraph at lines 28946--28950 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [413] [414] Underfull \hbox (badness 10000) in paragraph at lines 29093--29096 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [415] [416] Underfull \hbox (badness 7925) in paragraph at lines 29174--29178 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29174--29178 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29179--29188 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [417] [418] [419] [420] [421] [422] [423] [424] [425] [426] [427] [428] [429] [430] Underfull \hbox (badness 2726) in paragraph at lines 30193--30196 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [431] [432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] [443] [444] [445] [446] [447] [448] Underfull \vbox (badness 10000) has occurred while \output is active [449] [450] [451] [452] [453] [454] [455] [456] Underfull \hbox (badness 1533) in paragraph at lines 32001--32004 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [457] [458] [459] Underfull \hbox (badness 1163) in paragraph at lines 32172--32183 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [460] [461] [462] [463] [464] [465] [466] [467] Underfull \hbox (badness 6300) in paragraph at lines 32718--32720 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] Underfull \hbox (badness 10000) in paragraph at lines 33841--33845 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 33841--33845 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 33862--33864 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 33865--33869 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [484] [485] [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1655) in paragraph at lines 34467--34469 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [493] [494] [495] [496] [497] [498] [499] [500] [501] [502] [503] [504] [505] [506] [507] [508] [509] [510] Underfull \hbox (badness 2261) in paragraph at lines 35670--35675 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] [524] Underfull \hbox (badness 3668) in paragraph at lines 36705--36709 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [525] Underfull \hbox (badness 10000) in paragraph at lines 36796--36807 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [526] [527] [528] [529] [530] [531] [532] [533] [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] Underfull \hbox (badness 10000) in paragraph at lines 38428--38430 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [550] [551] [552] [553] [554] Underfull \hbox (badness 2913) in paragraph at lines 38846--38850 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [555] [556] [557] [558] Underfull \hbox (badness 1072) in paragraph at lines 39092--39096 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39097--39101 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39137--39143 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39137--39143 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39137--39143 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 39152--39159 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39152--39159 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39152--39159 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39152--39159 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [559] [560] [561] [562] Underfull \hbox (badness 2644) in paragraph at lines 39387--39391 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [563] [564] [565] [566] [567] [568] [569] [570] [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] Underfull \hbox (badness 1158) in paragraph at lines 40915--40917 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [585] [586] [587] [588] [589] [590] [591] [592] [593] Underfull \hbox (badness 1137) in paragraph at lines 41515--41521 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41533--41538 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [594] [595] Underfull \hbox (badness 1616) in paragraph at lines 41653--41658 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [596] [597] [598] [599] [600] [601] [602] [603] Underfull \hbox (badness 1472) in paragraph at lines 42199--42202 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [604] [605] [606] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42411. [607] [608] [609] [610] [611] [612] [613] [614] [615] [616] Underfull \vbox (badness 10000) has occurred while \output is active [617] Underfull \hbox (badness 10000) in paragraph at lines 43150--43154 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [618] [619] [620] [621] [622] Underfull \hbox (badness 10000) in paragraph at lines 43509--43512 [][][]\T1/zi4/m/sl/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [][]$https : / / developer . r-[]project . org / [623] [624] [625] Underfull \hbox (badness 10000) in paragraph at lines 43693--43697 [][][]\T1/zi4/m/sl/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 taskCallb ackManager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/sl/10 https : / / developer . [626] [627] [628] [629] [630] [631] [632] [633] [634] Underfull \hbox (badness 10000) in paragraph at lines 44341--44344 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [635] [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] [646] [647] Underfull \hbox (badness 1990) in paragraph at lines 45257--45265 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45257--45265 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [648] [649] [650] [651] [652] [653] [654] [655] [656] [657] [658] [659] [660] [661] [662] [663] [664] [665] [666] [667] [668] Underfull \hbox (badness 1014) in paragraph at lines 46694--46697 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [669] Underfull \hbox (badness 2401) in paragraph at lines 46827--46831 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [670] [671] Underfull \hbox (badness 3492) in paragraph at lines 46953--46955 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [672] Underfull \hbox (badness 2111) in paragraph at lines 47039--47044 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [673] [674] [675] [676] Underfull \hbox (badness 4001) in paragraph at lines 47287--47289 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [677] [678] [679] [680] [681] [682] Underfull \hbox (badness 5417) in paragraph at lines 47688--47692 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [683] Underfull \hbox (badness 10000) in paragraph at lines 47749--47753 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [684]) (./compiler-pkg.tex Chapter 2. [685] [686] [687] [688]) (./datasets-pkg.tex Chapter 3. [689] [690] [691] [692] [693] [694] [695] [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] [727] [728] [729] [730] [731] [732] [733] [734] [735] [736] [737] [738] [739] [740] [741] [742] [743] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3524--3524 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [744] [745] [746] [747] [748] [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764]) (./grDevices-pkg.tex Chapter 4. [765] [766] [767] [768] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 297--302 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/sl/10 axisTicks[][][]() []\T1 /ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1 /ptm/m/n/10 in [769] [770] [771] [772] [773] [774] [775] [776] [777] Underfull \hbox (badness 1424) in paragraph at lines 899--901 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [778] [779] [780] [781] [782] [783] Underfull \hbox (badness 5175) in paragraph at lines 1227--1229 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [784] Underfull \hbox (badness 2512) in paragraph at lines 1346--1348 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [785] [786] [787] [788] [789] Underfull \hbox (badness 1490) in paragraph at lines 1646--1651 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1659--1663 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [790] [791] [792] [793] [794] [795] Underfull \hbox (badness 1325) in paragraph at lines 2074--2084 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [796] Underfull \hbox (badness 10000) in paragraph at lines 2186--2188 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [797] [798] [799] Underfull \hbox (badness 6758) in paragraph at lines 2374--2377 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] Underfull \hbox (badness 10000) in paragraph at lines 3130--3131 [811] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] Underfull \vbox (badness 10000) has occurred while \output is active [826] [827] [828] Underfull \hbox (badness 1418) in paragraph at lines 4407--4414 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [829] [830] [831] [832] [833] [834] [835] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4872 \aliasA{symbol}{plotmath}{symbol} [836] [837] [838] [839] [840] [841] Underfull \hbox (badness 1584) in paragraph at lines 5265--5267 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5269--5276 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [842] [843] [844] [845] Underfull \hbox (badness 1377) in paragraph at lines 5571--5576 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [846] Underfull \hbox (badness 1377) in paragraph at lines 5675--5680 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [847] Underfull \hbox (badness 7344) in paragraph at lines 5744--5746 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [848] [849] Underfull \hbox (badness 2035) in paragraph at lines 5883--5892 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5883--5892 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5883--5892 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [850] Underfull \hbox (badness 10000) in paragraph at lines 5950--5955 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [851] [852] Underfull \hbox (badness 1546) in paragraph at lines 6090--6098 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [853] [854] [855] [856] [857] [858] [859] Underfull \hbox (badness 6625) in paragraph at lines 6534--6537 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [860] Underfull \hbox (badness 10000) in paragraph at lines 6638--6641 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [861] [862] [863] [864] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6875--6875 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [865] [866] [867] [868] [869] [870] [871] [872] [873] Underfull \hbox (badness 1189) in paragraph at lines 7503--7505 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [874] Underfull \hbox (badness 10000) in paragraph at lines 7608--7610 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [875] [876] [877] [878] [879] Underfull \hbox (badness 3780) in paragraph at lines 7923--7929 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/s l/10 "AvantGarde"[]\T1/ptm/m/n/10 , [880] [881] [882] [883] [884]) (./graphics-pkg.tex Chapter 5. [885] [886] [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] [899] [900] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1037--1037 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [901] [902] [903] [904] [905] [906] Underfull \hbox (badness 4634) in paragraph at lines 1410--1413 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [907] [908] [909] [910] [911] [912] [913] [914] [915] [916] [917] [918] [919] [920] [921] Underfull \hbox (badness 1728) in paragraph at lines 2388--2390 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [922] Underfull \hbox (badness 1009) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [923] [924] [925] [926] [927] [928] [929] [930] [931] [932] [933] [934] [935] [936] [937] [938] [939] [940] [941] [942] [943] [944] Underfull \vbox (badness 10000) has occurred while \output is active [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] [955] [956] Underfull \hbox (badness 3229) in paragraph at lines 4733--4738 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [957] [958] [959] [960] [961] Underfull \hbox (badness 1107) in paragraph at lines 5233--5239 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [962] Underfull \hbox (badness 10000) in paragraph at lines 5362--5365 [963] Underfull \hbox (badness 10000) in paragraph at lines 5423--5425 [964 ] [965 ] [966] [967] [968] [969] [970] [971] [972] [973] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6097 \aliasA{plot}{plot.default}{plot} [974] [975] [976] [977] [978] [979] [980] [981] [982] [983] [984] [985] [986] [987] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6997--6998 [][] [988 ] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] Underfull \hbox (badness 4954) in paragraph at lines 9109--9111 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9111--9113 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1020] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9191 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9191 \HeaderA{units}{Graphical Units}{units} [1021] [1022] [1023] [1024]) (./grid-pkg.tex Chapter 6. [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] [1033] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1043] Underfull \vbox (badness 10000) has occurred while \output is active [1044] [1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1073] [1074] [1075] [1076] [1077] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] Underfull \vbox (badness 10000) has occurred while \output is active [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] Underfull \hbox (badness 1067) in paragraph at lines 4842--4845 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1101] [1102] [1103] [1104] [1105] Underfull \hbox (badness 7256) in paragraph at lines 5193--5195 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1106] [1107] [1108] [1109] [1110] [1111] [1112] Underfull \hbox (badness 2142) in paragraph at lines 5647--5651 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1113] [1114] Underfull \hbox (badness 4699) in paragraph at lines 5729--5734 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1115] [1116] [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144]) (./methods-pkg.tex Chapter 7. [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] Underfull \vbox (badness 10000) has occurred while \output is active [1153] Underfull \vbox (badness 10000) has occurred while \output is active [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] Underfull \hbox (badness 2237) in paragraph at lines 1384--1386 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1163] [1164] [1165] [1166] [1167] [1168] [1169] [1170] Underfull \hbox (badness 10000) in paragraph at lines 1980--1985 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1980--1985 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1171] [1172] [1173] Underfull \hbox (badness 2213) in paragraph at lines 2212--2217 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1174] [1175] [1176] [1177] [1178] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1179] [1180] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2744--2749 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1181] [1182] [1183] [1184] [1185] [1186] [1187] Underfull \hbox (badness 1102) in paragraph at lines 3301--3303 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1188] [1189] [1190] [1191] [1192] Underfull \hbox (badness 10000) in paragraph at lines 3638--3647 []\T1/ptm/m/n/10 The [1193] [1194] Underfull \hbox (badness 10000) in paragraph at lines 3758--3759 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1195] Underfull \hbox (badness 10000) in paragraph at lines 3842--3843 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1196] [1197] [1198] [1199] [1200] [1201] [1202] [1203] Underfull \hbox (badness 1769) in paragraph at lines 4473--4479 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4473--4479 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1204] [1205] [1206] [1207] [1208] [1209] [1210] [1211] [1212] Underfull \vbox (badness 10000) has occurred while \output is active [1213] Underfull \vbox (badness 10000) has occurred while \output is active [1214] [1215] [1216] Underfull \hbox (badness 4036) in paragraph at lines 5438--5441 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1217] Underfull \hbox (badness 3803) in paragraph at lines 5513--5515 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1218] [1219] [1220] Underfull \hbox (badness 1087) in paragraph at lines 5744--5749 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] Underfull \hbox (badness 1675) in paragraph at lines 6451--6457 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1229] [1230] [1231] [1232] Underfull \vbox (badness 10000) has occurred while \output is active [1233] [1234] [1235] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6972 \aliasA{S4}{S3Part}{S4} [1236] [1237] [1238] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7228 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7230 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7231 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7233 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7234 \aliasA{Summary}{S4groupGeneric}{Summary} [1239] Underfull \hbox (badness 2050) in paragraph at lines 7295--7299 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1240] [1241] Underfull \hbox (badness 1286) in paragraph at lines 7483--7485 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] [1275] [1276] [1277] [1278] [1279] [1280] Underfull \hbox (badness 1158) in paragraph at lines 10490--10493 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1281] Underfull \hbox (badness 1852) in paragraph at lines 10568--10572 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1282] [1283] [1284] [1285]) (./parallel-pkg.tex [1286] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1287] [1288] [1289] [1290] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1291] [1292] [1293] [1294] [1295] [1296] [1297] [1298] [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] Underfull \hbox (badness 3386) in paragraph at lines 1400--1403 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1307] [1308] [1309]) (./splines-pkg.tex [1310] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324]) (./stats-pkg.tex Chapter 10. [1325] [1326] [1327] [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] [1337] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1346] [1347] [1348] [1349] [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] Underfull \hbox (badness 2503) in paragraph at lines 3557--3560 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1377] [1378] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3670. [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] [1393] [1394] [1395] Underfull \hbox (badness 3989) in paragraph at lines 4816--4823 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1396] [1397] [1398] [1399] [1400] [1401] [1402] [1403] [1404] Underfull \hbox (badness 2556) in paragraph at lines 5470--5473 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1405] [1406] [1407] [1408] [1409] [1410] Underfull \hbox (badness 2503) in paragraph at lines 5882--5886 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] [1421] [1422] [1423] Underfull \hbox (badness 7081) in paragraph at lines 6674--6677 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6678--6680 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1424] [1425] [1426] [1427] [1428] Underfull \vbox (badness 10000) has occurred while \output is active [1429] [1430] [1431] Underfull \vbox (badness 10000) has occurred while \output is active [1432] [1433] [1434] [1435] [1436] Underfull \hbox (badness 10000) in paragraph at lines 7574--7577 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/sl/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1437] [1438] [1439] [1440] [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] [1455] [1456] Underfull \vbox (badness 10000) has occurred while \output is active [1457] [1458] [1459] [1460] [1461] Underfull \hbox (badness 2626) in paragraph at lines 9271--9274 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1462] [1463] Underfull \hbox (badness 2503) in paragraph at lines 9378--9382 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] Underfull \hbox (badness 4518) in paragraph at lines 10733--10738 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1483] [1484] [1485] [1486] [1487] Underfull \hbox (badness 2142) in paragraph at lines 11095--11098 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11114--11117 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1488] Underfull \hbox (badness 1708) in paragraph at lines 11176--11180 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1489] [1490] [1491] [1492] [1493] Underfull \hbox (badness 1694) in paragraph at lines 11572--11575 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1494] [1495] [1496] [1497] [1498] [1499] [1500] [1501] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12053 \aliasA{hat}{influence.measures}{hat} [1502] [1503] Underfull \hbox (badness 1484) in paragraph at lines 12198--12200 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] Underfull \hbox (badness 10000) in paragraph at lines 12785--12787 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1513] [1514] [1515] [1516] [1517] Underfull \hbox (badness 2894) in paragraph at lines 13127--13131 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1518] [1519] [1520] [1521] [1522] [1523] Underfull \hbox (badness 1496) in paragraph at lines 13555--13561 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1524] [1525] [1526] [1527] [1528] [1529] Underfull \hbox (badness 4518) in paragraph at lines 13958--13963 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1530] [1531] [1532] [1533] [1534] [1535] [1536] [1537] [1538] [1539] Underfull \hbox (badness 4518) in paragraph at lines 14620--14625 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1540] [1541] Underfull \hbox (badness 6412) in paragraph at lines 14760--14764 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14767--14769 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1542] [1543] [1544] [1545] [1546] [1547] [1548] [1549] [1550] [1551] [1552] [1553] [1554] [1555] [1556] [1557] Underfull \hbox (badness 2503) in paragraph at lines 15843--15847 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1558] [1559] [1560] [1561] [1562] [1563] [1564] Underfull \hbox (badness 10000) in paragraph at lines 16356--16362 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16356--16362 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] [1577] [1578] [1579] [1580] [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] [1589] Underfull \hbox (badness 1158) in paragraph at lines 18014--18017 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1590] [1591] Underfull \vbox (badness 10000) has occurred while \output is active [1592] Underfull \vbox (badness 10000) has occurred while \output is active [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] Underfull \hbox (badness 1377) in paragraph at lines 19057--19062 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19062--19065 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19075--19079 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19075--19079 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19083--19087 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1606] [1607] [1608] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19308--19308 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Underfull \vbox (badness 10000) has occurred while \output is active [1609] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19311--19311 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1610] [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 1337) in paragraph at lines 19773--19776 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1616] [1617] [1618] [1619] [1620] [1621] [1622] [1623] Underfull \hbox (badness 10000) in paragraph at lines 20242--20248 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1624] [1625] [1626] [1627] [1628] [1629] [1630] Underfull \hbox (badness 1194) in paragraph at lines 20669--20672 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1631] [1632] [1633] [1634] [1635] [1636] Underfull \hbox (badness 2503) in paragraph at lines 21047--21050 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21074--21076 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1637] [1638] [1639] [1640] [1641] [1642] [1643] [1644] [1645] [1646] [1647] [1648] [1649] [1650] [1651] [1652] [1653] Underfull \hbox (badness 10000) in paragraph at lines 22152--22158 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] [1671] [1672] [1673] [1674] [1675] [1676] Underfull \hbox (badness 1337) in paragraph at lines 23628--23634 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] Underfull \hbox (badness 1436) in paragraph at lines 24118--24121 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, [1685] Underfull \hbox (badness 10000) in paragraph at lines 24256--24257 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1686] [1687] [1688] [1689] [1690] [1691] [1692] [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 1824) in paragraph at lines 25226--25232 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25226--25232 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25247--25250 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] Underfull \hbox (badness 2165) in paragraph at lines 25822--25827 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1710] [1711] [1712] [1713] Underfull \hbox (badness 1867) in paragraph at lines 26032--26034 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26048--26052 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] [1728] [1729] [1730] [1731] [1732] [1733] [1734] [1735] [1736] Underfull \vbox (badness 10000) has occurred while \output is active [1737] Underfull \hbox (badness 3514) in paragraph at lines 27700--27705 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1738] [1739] [1740] [1741] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27934--27934 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1742] Underfull \hbox (badness 3514) in paragraph at lines 27970--27976 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1743] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28030--28030 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1744] [1745] Underfull \hbox (badness 3514) in paragraph at lines 28203--28208 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1746] [1747] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1748] Underfull \hbox (badness 3514) in paragraph at lines 28355--28360 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1749] Underfull \hbox (badness 3514) in paragraph at lines 28449--28454 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1750] [1751] Underfull \hbox (badness 6691) in paragraph at lines 28541--28546 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1752] [1753] [1754] [1755] [1756] [1757] [1758] [1759] Underfull \hbox (badness 4024) in paragraph at lines 29028--29031 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1760] [1761] [1762] [1763] [1764] [1765] [1766] [1767] [1768] Underfull \hbox (badness 5431) in paragraph at lines 29631--29633 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1769] [1770] [1771] Underfull \hbox (badness 5431) in paragraph at lines 29841--29844 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1772] [1773] [1774] [1775] [1776] Underfull \hbox (badness 1337) in paragraph at lines 30156--30160 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1777] [1778] [1779] Underfull \hbox (badness 1127) in paragraph at lines 30293--30296 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1780] [1781] Underfull \hbox (badness 1616) in paragraph at lines 30499--30502 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] [1796] [1797] [1798] [1799] [1800] Underfull \hbox (badness 3557) in paragraph at lines 31726--31730 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1801] [1802] [1803] [1804] [1805] [1806] Underfull \hbox (badness 1337) in paragraph at lines 32093--32097 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] Underfull \hbox (badness 1337) in paragraph at lines 32621--32625 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1815] [1816] [1817] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32829--32829 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1818] [1819] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32990--32990 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1820] [1821] [1822] [1823] [1824]) (./stats4-pkg.tex Chapter 11. [1825] [1826] [1827] Underfull \vbox (badness 10000) has occurred while \output is active [1828] [1829] [1830] [1831] [1832] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1833] [1834] [1835]) (./tcltk-pkg.tex [1836] Chapter 12. [1837] [1838] [1839] [1840] [1841] [1842] [1843] Underfull \vbox (badness 10000) has occurred while \output is active [1844] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [1845] [1846] [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] [1855] [1856]) (./tools-pkg.tex Chapter 13. [1857] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1858] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1859] [1860] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [1861] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [1862] [1863] Underfull \hbox (badness 1142) in paragraph at lines 464--468 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] Underfull \hbox (badness 1014) in paragraph at lines 1220--1222 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1226--1228 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [1875] Underfull \hbox (badness 10000) in paragraph at lines 1263--1266 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1263--1266 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1876] [1877] [1878] [1879] [1880] Underfull \hbox (badness 10000) in paragraph at lines 1637--1640 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/sl/10 CRAN_aliases_db[]\T1/ptm /m/n/10 , []\T1/zi4/m/sl/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_current_db []\T1/ptm/m/n/10 and [1881] [1882] Underfull \hbox (badness 4096) in paragraph at lines 1756--1764 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1766--1768 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1883] [1884] [1885] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1967 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.1968 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1886] [1887] [1888] [1889] [1890] [1891] [1892] Underfull \hbox (badness 3386) in paragraph at lines 2442--2445 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [1893] [1894] Underfull \hbox (badness 4096) in paragraph at lines 2582--2590 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1895] [1896] [1897] [1898] [1899] [1900] [1901] [1902] [1903] [1904] [1905] [1906] [1907] Underfull \hbox (badness 1424) in paragraph at lines 3516--3518 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1908] [1909] [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] Underfull \hbox (badness 10000) in paragraph at lines 4232--4234 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1919] [1920] Underfull \hbox (badness 10000) in paragraph at lines 4388--4391 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/sl/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/sl/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1921] [1922] [1923] [1924] [1925] [1926] Underfull \hbox (badness 1796) in paragraph at lines 4745--4750 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [1927] Underfull \hbox (badness 1838) in paragraph at lines 4831--4837 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4831--4837 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1928] [1929] [1930] [1931] Underfull \hbox (badness 2197) in paragraph at lines 5112--5122 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [1932] Underfull \hbox (badness 1571) in paragraph at lines 5178--5182 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1933] [1934] [1935]) (./utils-pkg.tex [1936] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1948] [1949] Underfull \hbox (badness 3861) in paragraph at lines 934--939 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1950] [1951] [1952] Underfull \hbox (badness 10000) in paragraph at lines 1139--1141 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1953] [1954] [1955] Underfull \vbox (badness 10000) has occurred while \output is active [1956] [1957] [1958] [1959] [1960] Underfull \hbox (badness 1371) in paragraph at lines 1666--1668 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] [1970] Underfull \hbox (badness 2057) in paragraph at lines 2386--2388 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1971] Underfull \hbox (badness 2150) in paragraph at lines 2461--2468 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2461--2468 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [1972] [1973] [1974] [1975] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2738 ... the Clipboard in MS Windows}{clipboard} [1976] [1977] [1978] [1979] [1980] [1981] [1982] [1983] [1984] [1985] [1986] [1987] [1988] [1989] [1990] [1991] [1992] [1993] [1994] Underfull \hbox (badness 6842) in paragraph at lines 4048--4053 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1995] Underfull \hbox (badness 1430) in paragraph at lines 4111--4115 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1996] Underfull \hbox (badness 1184) in paragraph at lines 4182--4198 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4182--4198 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4182--4198 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [1997] [1998] Underfull \hbox (badness 10000) in paragraph at lines 4332--4334 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1999] [2000] [2001] [2002] [2003] [2004] [2005] [2006] [2007] [2008] [2009] [2010] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5111 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5111 ...mat Unordered and Ordered Lists}{format} [2011] [2012] [2013] [2014] [2015] [2016] [2017] [2018] Underfull \hbox (badness 1622) in paragraph at lines 5634--5638 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2019] [2020] [2021] [2022] [2023] Underfull \hbox (badness 1448) in paragraph at lines 6019--6024 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] Underfull \hbox (badness 1371) in paragraph at lines 6567--6569 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2032] Underfull \hbox (badness 1502) in paragraph at lines 6656--6662 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6656--6662 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2033] [2034] [2035] Underfull \hbox (badness 10000) in paragraph at lines 6833--6842 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6833--6842 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2036] Underfull \hbox (badness 2150) in paragraph at lines 6895--6898 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2037] [2038] Underfull \hbox (badness 3118) in paragraph at lines 7034--7036 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2039] [2040] Underfull \hbox (badness 1325) in paragraph at lines 7213--7217 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2041] Underfull \hbox (badness 1424) in paragraph at lines 7305--7308 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2042] Underfull \hbox (badness 3219) in paragraph at lines 7377--7384 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7377--7384 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7377--7384 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7377--7384 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7385--7388 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2043] Underfull \hbox (badness 1024) in paragraph at lines 7514--7517 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2044] Underfull \hbox (badness 10000) in paragraph at lines 7547--7552 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2045] Underfull \hbox (badness 5133) in paragraph at lines 7606--7610 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2046] [2047] [2048] [2049] [2050] [2051] [2052] [2053] [2054] [2055] Underfull \hbox (badness 10000) in paragraph at lines 8270--8272 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2056] [2057] [2058] [2059] [2060] [2061] [2062] [2063] [2064] [2065] [2066] [2067] Underfull \hbox (badness 2310) in paragraph at lines 9057--9062 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] Underfull \hbox (badness 1248) in paragraph at lines 9628--9632 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2076] Underfull \hbox (badness 1789) in paragraph at lines 9706--9708 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2077] [2078] [2079] [2080] Underfull \hbox (badness 2600) in paragraph at lines 9930--9933 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 1097) in paragraph at lines 10567--10570 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2089] [2090] Underfull \hbox (badness 3000) in paragraph at lines 10703--10708 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2091] [2092] [2093] [2094] [2095] [2096] [2097] [2098] Underfull \hbox (badness 2134) in paragraph at lines 11298--11303 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2099] Underfull \hbox (badness 10000) in paragraph at lines 11354--11359 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11354--11359 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2100] [2101] [2102] [2103] [2104] [2105] [2106] [2107] Underfull \hbox (badness 1824) in paragraph at lines 11852--11856 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . Ac-cessed [2108] [2109] [2110] [2111] [2112] [2113] Underfull \hbox (badness 4060) in paragraph at lines 12297--12300 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/sl/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/sl/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able Overfull \hbox (18.77168pt too wide) in paragraph at lines 12320--12320 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2114] [2115] [2116] [2117] Underfull \hbox (badness 2150) in paragraph at lines 12575--12577 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / www . gnu . org / software / emac s / manual / [2118] [2119] [2120] Underfull \hbox (badness 10000) in paragraph at lines 12795--12799 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/sl/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able [2121] Underfull \hbox (badness 10000) in paragraph at lines 12828--12834 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12843--12849 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2122] [2123] Underfull \hbox (badness 1009) in paragraph at lines 13018--13030 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If [2124] Underfull \hbox (badness 4779) in paragraph at lines 13058--13060 []\T1/ptm/m/n/10 The file `\T1/zi4/m/sl/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/sl/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and Underfull \hbox (badness 1077) in paragraph at lines 13088--13095 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2125] [2126] [2127] [2128] [2129] [2130] Underfull \hbox (badness 3780) in paragraph at lines 13513--13519 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/sl/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13531--13534 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/sl/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2131] [2132] [2133] [2134] Underfull \hbox (badness 2302) in paragraph at lines 13741--13743 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2135] [2136] [2137] [2138] Underfull \hbox (badness 4441) in paragraph at lines 14040--14045 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/sl/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/sl/10 deparse[][][](control = \T1/ptm/m/sl/10 control\T1/zi4/ m/sl/10 ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 14049--14052 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2139] [2140] [2141] [2142] [2143] [2144] [2145] Underfull \hbox (badness 2932) in paragraph at lines 14480--14487 []\T1/ptm/m/n/10 If []\T1/zi4/m/sl/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14480--14487 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/sl/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. Ob- [2146] [2147] Underfull \hbox (badness 1460) in paragraph at lines 14644--14653 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/sl/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/sl/10 tar []\T1/ptm/m/n /10 which used Underfull \hbox (badness 1019) in paragraph at lines 14662--14674 []\T1/ptm/m/n/10 For GNU []\T1/zi4/m/sl/10 tar[]\T1/ptm/m/n/10 , `[]\T1/zi4/m/s l/10 --format=ustar[]\T1/ptm/m/n/10 ' forces a more portable for-mat. (The de-f ault is set at Underfull \hbox (badness 1527) in paragraph at lines 14662--14674 \T1/ptm/m/n/10 com-pi-la-tion and will be shown at the end of the out-put from []\T1/zi4/m/sl/10 tar --help[]\T1/ptm/m/n/10 : for ver-sion [2148] [2149] Underfull \hbox (badness 6510) in paragraph at lines 14794--14798 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/sl/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/sl/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14801--14804 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14801--14804 \T1/zi4/m/sl/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2150] [2151] [2152] [2153] [2154] [2155] [2156] [2157] [2158] Underfull \hbox (badness 10000) in paragraph at lines 15474--15479 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/sl/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/sl/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15474--15479 [][][]\T1/zi4/m/sl/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15480--15482 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See [2159] Underfull \hbox (badness 10000) in paragraph at lines 15539--15542 [][][]\T1/zi4/m/sl/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174]) [2175] [2176] (./KernSmooth-pkg.tex Chapter 15. [2177] [2178] [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186]) (./MASS-pkg.tex Chapter 16. [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.confint.g lm}) has been already used, duplicate ignored \relax l.1479 ...{confint.glm}{confint-MASS}{confint.glm} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.confint.n ls}) has been already used, duplicate ignored \relax l.1480 ...{confint.nls}{confint-MASS}{confint.nls} [2208] [2209] [2210] [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] Underfull \hbox (badness 10000) in paragraph at lines 2789--2794 []\T1/zi4/m/sl/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/s l/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "negative [2226] [2227] Underfull \hbox (badness 4686) in paragraph at lines 2961--2963 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 1117) in paragraph at lines 4740--4743 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [2253] Underfull \hbox (badness 1117) in paragraph at lines 4819--4822 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] [2267] [2268] [2269] [2270] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6086 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk.1}) h as been already used, duplicate ignored \relax l.6086 ...sical N, P, K Factorial Experiment}{npk} [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] [2280] [2281] [2282] Underfull \hbox (badness 1117) in paragraph at lines 6987--6994 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [2283] Underfull \hbox (badness 3138) in paragraph at lines 7058--7064 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2284] [2285] [2286] Underfull \hbox (badness 1910) in paragraph at lines 7237--7240 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/sl/10 min(p, [2287] [2288] [2289] [2290] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.profile.g lm}) has been already used, duplicate ignored \relax l.7514 ... for Profiling glm Objects}{profile.glm} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.profile.g lm.1}) has been already used, duplicate ignored \relax l.7514 ... for Profiling glm Objects}{profile.glm} [2291] [2292] [2293] [2294] Underfull \hbox (badness 4686) in paragraph at lines 7809--7811 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2295] [2296] [2297] [2298] [2299] [2300] [2301] [2302] [2303] [2304] [2305] [2306] [2307] [2308] [2309] [2310] [2311] [2312] [2313] [2314] [2315] [2316] [2317] [2318] [2319] [2320] [2321] [2322] [2323] [2324] [2325] [2326] [2327] [2328] [2329] [2330] [2331]) (./Matrix-pkg.tex [2332] Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 35--38 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 35--38 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2333] Underfull \hbox (badness 1769) in paragraph at lines 89--92 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2334] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.all.equal }) has been already used, duplicate ignored \relax l.182 ...{all.equal}{all.equal-methods}{all.equal} [2335] Underfull \hbox (badness 3098) in paragraph at lines 264--266 []\T1/ptm/m/n/10 optional ar-gu-ments passed to the de-fault method for generic func-tion [2336] [2337] [2338] Underfull \hbox (badness 5119) in paragraph at lines 492--496 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2339] [2340] Underfull \hbox (badness 2035) in paragraph at lines 590--593 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/sl/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/sl/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/sl/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2341] [2342] [2343] Underfull \hbox (badness 5817) in paragraph at lines 913--916 []\T1/ptm/m/n/10 Class [][][]\T1/zi4/m/sl/10 BunchKaufmanFactorization[][][][]\ T1/ptm/m/n/10 , di-rectly. Class [][][]\T1/zi4/m/sl/10 MatrixFactorization[][][ ][]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 6758) in paragraph at lines 919--924 []\T1/ptm/m/n/10 Objects can be gen-er-ated di-rectly by calls of the form []\T 1/zi4/m/sl/10 new("BunchKaufman", ...) Underfull \hbox (badness 2961) in paragraph at lines 919--924 []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 new("pBunchKaufman", ...)[]\T1/ptm/m/n/10 , but they are more typ-i-cally ob-tained as the value of [2344] [2345] Underfull \hbox (badness 10000) in paragraph at lines 1081--1086 []\T1/ptm/m/n/10 An ob-ject rep-re-sent-ing the fac-tor-iza-tion, in-her-it-ing from vir-tual class [2346] [2347] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.cbind2.Rd ash.methods}) has been already used, duplicate ignored \relax l.1185 ... on cbind2/rbind2}{cbind2.Rdash.methods} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.cbind2}) has been already used, duplicate ignored \relax l.1186 \aliasA{cbind2}{cbind2-methods}{cbind2} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rbind2}) has been already used, duplicate ignored \relax l.1195 \aliasA{rbind2}{cbind2-methods}{rbind2} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rbind2.Rd ash.methods}) has been already used, duplicate ignored \relax l.1204 ...s}{cbind2-methods}{rbind2.Rdash.methods} [2348] Underfull \hbox (badness 10000) in paragraph at lines 1322--1329 []\T1/ptm/m/n/10 The im-ple-men-ta-tion of class []\T1/zi4/m/sl/10 CHMfactor [] \T1/ptm/m/n/10 is based on CHOLMOD's C-level [2349] [2350] [2351] [2352] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol}) ha s been already used, duplicate ignored \relax l.1625 \aliasA{chol}{chol-methods}{chol} Underfull \hbox (badness 6220) in paragraph at lines 1656--1658 []\T1/ptm/m/n/10 Methods for [][][]\T1/zi4/m/sl/10 sparseMatrix[][][] []\T1/ptm /m/n/10 are built on CHOLMOD rou-tines []\T1/zi4/m/sl/10 cholmod_analyze []\T1/ ptm/m/n/10 and [2353] Underfull \hbox (badness 2334) in paragraph at lines 1730--1734 []\T1/ptm/m/n/10 The LA-PACK source code, in-clud-ing doc-u-men-ta-tion; see [] []$\T1/zi4/m/sl/10 https : / / netlib . org / lapack / Underfull \hbox (badness 1616) in paragraph at lines 1730--1734 \T1/zi4/m/sl/10 double / dpstrf . f$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 h ttps : / / netlib . org / lapack / double / dpotrf . f$[][]\T1/ptm/m/n/10 , and [][]$\T1/zi4/m/sl/10 https : / / netlib . [2354] Underfull \vbox (badness 10000) has occurred while \output is active [2355] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol2inv} ) has been already used, duplicate ignored \relax l.1854 ...sA{chol2inv}{chol2inv-methods}{chol2inv} [2356] [2357] Underfull \hbox (badness 10000) in paragraph at lines 2005--2008 []\T1/ptm/m/n/10 Class [][][]\T1/zi4/m/sl/10 CholeskyFactorization[][][][]\T1/p tm/m/n/10 , di-rectly. Class [][][]\T1/zi4/m/sl/10 MatrixFactorization[][][][]\ T1/ptm/m/n/10 , by class Underfull \hbox (badness 7722) in paragraph at lines 2011--2019 []\T1/ptm/m/n/10 Objects can be gen-er-ated di-rectly by calls of the form []\T 1/zi4/m/sl/10 new("Cholesky", ...) []\T1/ptm/m/n/10 or Underfull \hbox (badness 1990) in paragraph at lines 2051--2060 []\T1/ptm/m/n/10 In \T1/ptm/b/n/10 Ma-trix []\T1/zi4/m/sl/10 < 1.6-0[]\T1/ptm/m /n/10 , class []\T1/zi4/m/sl/10 Cholesky []\T1/ptm/m/n/10 ex-tended [][][]\T1/z i4/m/sl/10 dtrMatrix[][][] []\T1/ptm/m/n/10 and class []\T1/zi4/m/sl/10 pCholes ky []\T1/ptm/m/n/10 ex-tended Underfull \hbox (badness 2334) in paragraph at lines 2066--2070 []\T1/ptm/m/n/10 The LA-PACK source code, in-clud-ing doc-u-men-ta-tion; see [] []$\T1/zi4/m/sl/10 https : / / netlib . org / lapack / Underfull \hbox (badness 1616) in paragraph at lines 2066--2070 \T1/zi4/m/sl/10 double / dpstrf . f$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 h ttps : / / netlib . org / lapack / double / dpotrf . f$[][]\T1/ptm/m/n/10 , and [][]$\T1/zi4/m/sl/10 https : / / netlib . [2358] [2359] Underfull \hbox (badness 6220) in paragraph at lines 2185--2187 []\T1/ptm/m/n/10 Methods for [][][]\T1/zi4/m/sl/10 sparseMatrix[][][] []\T1/ptm /m/n/10 are built on CHOLMOD rou-tines []\T1/zi4/m/sl/10 cholmod_analyze []\T1/ ptm/m/n/10 and [2360] [2361] Underfull \hbox (badness 2334) in paragraph at lines 2315--2319 []\T1/ptm/m/n/10 The LA-PACK source code, in-clud-ing doc-u-men-ta-tion; see [] []$\T1/zi4/m/sl/10 https : / / netlib . org / lapack / Underfull \hbox (badness 1616) in paragraph at lines 2315--2319 \T1/zi4/m/sl/10 double / dpstrf . f$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 h ttps : / / netlib . org / lapack / double / dpotrf . f$[][]\T1/ptm/m/n/10 , and [][]$\T1/zi4/m/sl/10 https : / / netlib . [2362] Underfull \vbox (badness 10000) has occurred while \output is active [2363] Underfull \vbox (badness 10000) has occurred while \output is active [2364] [2365] [2366] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colMeans} ) has been already used, duplicate ignored \relax l.2696 ...asA{colMeans}{colSums-methods}{colMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums}) has been already used, duplicate ignored \relax l.2704 \aliasA{colSums}{colSums-methods}{colSums} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowMeans} ) has been already used, duplicate ignored \relax l.2711 ...asA{rowMeans}{colSums-methods}{rowMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowSums}) has been already used, duplicate ignored \relax l.2719 \aliasA{rowSums}{colSums-methods}{rowSums} [2367] [2368] [2369] Underfull \hbox (badness 3547) in paragraph at lines 2888--2891 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2370] [2371] [2372] [2373] [2374] [2375] Underfull \hbox (badness 1983) in paragraph at lines 3390--3398 []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 unpackedMatrix[][][][]\T1/ptm/m/n/10 . Al-ter-na-tively into the (cur-rently) three sub-classes [][][]\T1/zi4/m/sl/ 10 ddenseMatrix[][][][]\T1/ptm/m/n/10 , [2376] [2377] [2378] [2379] Underfull \hbox (badness 2717) in paragraph at lines 3712--3716 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2380] Underfull \hbox (badness 3417) in paragraph at lines 3828--3830 []\T1/zi4/m/sl/10 .sparseDiagonal() []\T1/ptm/m/n/10 ex-ists pri-mar-ily to lev er-age ef-fi-cient C-level meth-ods avail-able for [2381] [2382] Underfull \hbox (badness 8019) in paragraph at lines 3933--3935 []\T1/zi4/m/sl/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/sl/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 3936--3940 []\T1/zi4/m/sl/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2383] [2384] [2385] [2386] Underfull \hbox (badness 1902) in paragraph at lines 4263--4265 [][][]\T1/zi4/m/sl/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/sl/10 zapsmall(x, Underfull \hbox (badness 2020) in paragraph at lines 4300--4303 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/sl/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2387] [2388] [2389] Underfull \hbox (badness 4378) in paragraph at lines 4503--4512 []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/sl/10 chol[][][]() []\T1/ptm/m/n/10 is typ- i-cally used, e.g., see []\T1/zi4/m/sl/10 selectMethod("coerce", c(from="dsyMat rix", [2390] [2391] [2392] [2393] Underfull \hbox (badness 10000) in paragraph at lines 4834--4837 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "dMatrix"[]\T1/ptm/m/n/10 , by class [ ]\T1/zi4/m/sl/10 "dsparseMatrix"[]\T1/ptm/m/n/10 ; class []\T1/zi4/m/sl/10 "spa rseMatrix"[]\T1/ptm/m/n/10 , by classes [2394] Underfull \hbox (badness 4518) in paragraph at lines 4929--4932 []\T1/zi4/m/sl/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/sl/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 type = Underfull \hbox (badness 3690) in paragraph at lines 4932--4935 []\T1/zi4/m/sl/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/sl/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 type = [2395] [2396] Underfull \hbox (badness 2318) in paragraph at lines 5035--5039 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/sl/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/sl/10 "dMatrix"[]\T1/ptm/m/n/10 , [2397] Underfull \hbox (badness 3240) in paragraph at lines 5151--5155 []\T1/zi4/m/sl/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/sl/10 determinant[][][](x) [2398] [2399] [2400] [2401] Underfull \hbox (badness 10000) in paragraph at lines 5399--5401 []\T1/ptm/m/n/10 a ma-trix fac-tor-iza-tion, typ-i-cally in-her-it-ing from vir -tual class [2402] Underfull \hbox (badness 10000) in paragraph at lines 5522--5529 []\T1/zi4/m/sl/10 signature(x = "CHMfactor")[]\T1/ptm/m/n/10 : as []\T1/zi4/m/s l/10 expand2[]\T1/ptm/m/n/10 , but re-turn-ing []\T1/zi4/m/sl/10 list(P, L)[]\T 1/ptm/m/n/10 . Underfull \hbox (badness 1776) in paragraph at lines 5522--5529 []\T1/zi4/m/sl/10 expand(x)[["P"]] []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 expan d2(x)[["P1"]] []\T1/ptm/m/n/10 rep-re-sent the same per-mu-ta-tion ma-trix Underfull \hbox (badness 10000) in paragraph at lines 5529--5544 []\T1/zi4/m/sl/10 signature(x = "sparseLU")[]\T1/ptm/m/n/10 : as []\T1/zi4/m/sl /10 expand2[]\T1/ptm/m/n/10 , but re-turn-ing []\T1/zi4/m/sl/10 list(P, L, U, Q )[]\T1/ptm/m/n/10 . Underfull \hbox (badness 10000) in paragraph at lines 5544--5549 []\T1/zi4/m/sl/10 signature(x = "denseLU")[]\T1/ptm/m/n/10 : as []\T1/zi4/m/sl/ 10 expand2[]\T1/ptm/m/n/10 , but re-turn-ing []\T1/zi4/m/sl/10 list(L, U, P)[]\ T1/ptm/m/n/10 . Underfull \hbox (badness 1142) in paragraph at lines 5544--5549 []\T1/zi4/m/sl/10 expand(x)[["P"]] []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 expan d2(x)[["P1."]] []\T1/ptm/m/n/10 are iden-ti-cal mod-ulo []\T1/zi4/m/sl/10 Dimna mes[]\T1/ptm/m/n/10 . The [2403] [2404] [2405] [2406] [2407] [2408] Underfull \hbox (badness 1087) in paragraph at lines 5987--5993 []\T1/ptm/m/n/10 a string whose first three char-ac-ters spec-ify the class of the re-sult. It Underfull \hbox (badness 10000) in paragraph at lines 6000--6002 []\T1/ptm/m/n/10 a string in []\T1/zi4/m/sl/10 c("trace", "sumLog", "prod", "mi n", "max", "range", [2409] [2410] [2411] [2412] Underfull \hbox (badness 1931) in paragraph at lines 6262--6264 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/sl/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2413] [2414] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.image}) h as been already used, duplicate ignored \relax l.6399 \aliasA{image}{image-methods}{image} [2415] Underfull \hbox (badness 1005) in paragraph at lines 6476--6481 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/sl/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 6476--6481 \T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/sl/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is Underfull \hbox (badness 5862) in paragraph at lines 6495--6498 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/sl/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2416] Overfull \hbox (42.75635pt too wide) in paragraph at lines 6545--6545 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2417] [2418] [2419] [2420] Underfull \hbox (badness 1509) in paragraph at lines 6810--6812 []\T1/ptm/m/n/10 an in-te-ger off-set, in-di-cat-ing that the re-sult should be a per-mu-ta-tion of [2421] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.anyNA}) h as been already used, duplicate ignored \relax l.6888 \aliasA{anyNA}{is.na-methods}{anyNA} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.finite }) has been already used, duplicate ignored \relax l.6895 ...asA{is.finite}{is.na-methods}{is.finite} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.infini te}) has been already used, duplicate ignored \relax l.6903 ...is.infinite}{is.na-methods}{is.infinite} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.na}) h as been already used, duplicate ignored \relax l.6911 \aliasA{is.na}{is.na-methods}{is.na} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.is.nan}) has been already used, duplicate ignored \relax l.6918 \aliasA{is.nan}{is.na-methods}{is.nan} [2422] [2423] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.isSymmetr ic}) has been already used, duplicate ignored \relax l.7077 ...etric}{isSymmetric-methods}{isSymmetric} [2424] Overfull \hbox (26.39984pt too wide) in paragraph at lines 7124--7124 []\T1/zi4/m/sl/10 isSymmetric(object, checkDN = TRUE, tol = 100 * .Machine$dou ble.eps, tol1 = 8 * tol, ...)[] [2425] [2426] [2427] Underfull \vbox (badness 10000) has occurred while \output is active [2428] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.kronecker }) has been already used, duplicate ignored \relax l.7453 ...kronecker}{kronecker-methods}{kronecker} [2429] [2430] [2431 pdfTeX warning (ext4): destination with the same identifier (name{Rfn.*,ndiMatr ix,Matrix.Rdash.method}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.7725 \item[\code{Dim},\code{Dimnames}:] The dimension (a length-2] Underfull \hbox (badness 2478) in paragraph at lines 7736--7741 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/sl/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ sl/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 7744--7747 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2432] [2433] [2434] Underfull \hbox (badness 10000) in paragraph at lines 7968--7971 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2435] Underfull \hbox (badness 10000) in paragraph at lines 8029--8032 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2436] [2437] [2438] [2439] pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rpcent.* .Rpcent.}) has been already used, duplicate ignored \relax l.8310 ...*\%}{matmult-methods}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.crossprod }) has been already used, duplicate ignored \relax l.8384 ...A{crossprod}{matmult-methods}{crossprod} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.tcrosspro d}) has been already used, duplicate ignored \relax l.8460 ...tcrossprod}{matmult-methods}{tcrossprod} [2440] Underfull \hbox (badness 10000) in paragraph at lines 8618--8623 []\T1/zi4/m/sl/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 8618--8623 []\T1/zi4/m/sl/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 8627--8629 []\T1/zi4/m/sl/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/sl/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 8629--8631 []\T1/zi4/m/sl/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/sl/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2441] [2442] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.8856 \aliasA{det}{Matrix-class}{det} [2443] Underfull \hbox (badness 1527) in paragraph at lines 8933--8935 []\T1/zi4/m/sl/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/sl/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode Underfull \hbox (badness 4846) in paragraph at lines 8941--8944 []\T1/zi4/m/sl/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/sl/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 8946--8949 [2444] [2445] [2446] Underfull \hbox (badness 10000) in paragraph at lines 9148--9150 []\T1/zi4/m/sl/10 signature(x = "MatrixFactorization", logarithm = "missing")[] \T1/ptm/m/n/10 : sets Underfull \hbox (badness 10000) in paragraph at lines 9154--9156 []\T1/zi4/m/sl/10 signature(x = "MatrixFactorization", value = "NULL")[]\T1/ptm /m/n/10 : re-turns []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with Underfull \hbox (badness 10000) in paragraph at lines 9156--9158 []\T1/zi4/m/sl/10 signature(x = "MatrixFactorization", value = "list")[]\T1/ptm /m/n/10 : re-turns []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with [2447] Underfull \hbox (badness 10000) in paragraph at lines 9193--9196 []\T1/ptm/m/n/10 Generic func-tions [][][]\T1/zi4/m/sl/10 expand1[][][] []\T1/p tm/m/n/10 and [][][]\T1/zi4/m/sl/10 expand2[][][] []\T1/ptm/m/n/10 for con-stru ct-ing ma-trix fac-tors from [2448] Underfull \hbox (badness 10000) in paragraph at lines 9311--9313 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/sl/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/sl/10 X <- [2449] [2450] Underfull \vbox (badness 10000) has occurred while \output is active [2451] Underfull \hbox (badness 2478) in paragraph at lines 9507--9512 []\T1/ptm/m/n/10 Class []\T1/zi4/m/sl/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/sl/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ sl/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 9515--9518 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2452] [2453] Underfull \hbox (badness 5924) in paragraph at lines 9696--9698 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2454] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.norm}) ha s been already used, duplicate ignored \relax l.9738 \aliasA{norm}{norm-methods}{norm} [2455] [2456] [2457] Underfull \hbox (badness 10000) in paragraph at lines 10031--10034 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2458] Underfull \hbox (badness 10000) in paragraph at lines 10095--10098 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/sl/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/sl/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2459] [2460] [2461] Underfull \hbox (badness 4242) in paragraph at lines 10295--10298 [][][]\T1/zi4/m/sl/10 pack[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 unp ack[][][][]\T1/ptm/m/n/10 ; its vir-tual "com-ple-ment" []\T1/zi4/m/sl/10 "[][] unpackedMatrix[][][]"[]\T1/ptm/m/n/10 ; its proper sub-classes [2462] Underfull \hbox (badness 3547) in paragraph at lines 10383--10386 []\T1/zi4/m/sl/10 signature(x = "pMatrix", y = "Matrix") []\T1/ptm/m/n/10 and o th-ers listed by []\T1/zi4/m/sl/10 showMethods("%*%", [2463] [2464] [2465] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.10601 \aliasA{qr}{qr-methods}{qr} [2466] [2467] [2468] [2469] Underfull \hbox (badness 7186) in paragraph at lines 10845--10851 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/sl/10 qr[][][](x, tol, [2470] [2471] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rcond}) h as been already used, duplicate ignored \relax l.11002 \aliasA{rcond}{rcond-methods}{rcond} [2472] [2473] [2474] [2475] Underfull \hbox (badness 2351) in paragraph at lines 11284--11292 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 11284--11292 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/sl/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/sl/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/sl/10 NULL[]\T1/ptm/m/n/10 --- [2476] [2477] Underfull \hbox (badness 10000) in paragraph at lines 11441--11444 []\T1/ptm/m/n/10 Class [][][]\T1/zi4/m/sl/10 SchurFactorization[][][][]\T1/ptm/ m/n/10 , di-rectly. Class [][][]\T1/zi4/m/sl/10 MatrixFactorization[][][][]\T1/ ptm/m/n/10 , by class [2478] [2479] [2480] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solve}) h as been already used, duplicate ignored \relax l.11630 \aliasA{solve}{solve-methods}{solve} [2481] Underfull \hbox (badness 5316) in paragraph at lines 11816--11821 []\T1/ptm/m/n/10 Methods for dense []\T1/zi4/m/sl/10 a []\T1/ptm/m/n/10 are bui lt on 14 LA-PACK rou-tines: class []\T1/zi4/m/sl/10 d..Matrix[]\T1/ptm/m/n/10 , where [2482] Underfull \hbox (badness 10000) in paragraph at lines 11916--11919 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame [2483] Underfull \hbox (badness 10000) in paragraph at lines 11952--11955 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 11963--11967 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2484] [2485] [2486] [2487] [2488] [2489] [2490] [2491] Underfull \hbox (badness 10000) in paragraph at lines 12500--12508 []\T1/zi4/m/sl/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 12500--12508 []\T1/zi4/m/sl/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/sl/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/sl/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 12525--12533 []\T1/zi4/m/sl/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 12525--12533 []\T1/zi4/m/sl/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2492] [2493] [2494] [2495] [2496] Underfull \hbox (badness 5036) in paragraph at lines 12918--12920 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2497] Underfull \hbox (badness 2828) in paragraph at lines 13084--13087 []\T1/zi4/m/sl/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 13106--13109 []\T1/zi4/m/sl/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/sl/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/sl/10 (x, times, [2498] [2499] [2500] [2501] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.[<.Rdash. }) has been already used, duplicate ignored \relax l.13311 ...\Rdash{}}{subassign-methods}{[<.Rdash.} Underfull \hbox (badness 6910) in paragraph at lines 13398--13400 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2502] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.[}) has b een already used, duplicate ignored \relax l.13445 \aliasA{[}{subscript-methods}{[} [2503] [2504] Underfull \hbox (badness 2057) in paragraph at lines 13656--13658 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., Underfull \hbox (badness 10000) in paragraph at lines 13670--13675 []\T1/zi4/m/sl/10 skewpart(x) []\T1/ptm/m/n/10 re-turns a skew-symmetric ma-tri x, in-her-it-ing from [][][]\T1/zi4/m/sl/10 generalMatrix[][][][]\T1/ptm/m/n/10 , [2505] [2506] Underfull \hbox (badness 10000) in paragraph at lines 13826--13831 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/sl/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/sl/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 13832--13838 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/sl/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 crossprod []\T1/ptm/m /n/10 are de-fined [2507] [2508] [2509] Overfull \hbox (21.75807pt too wide) in paragraph at lines 14021--14027 []\T1/ptm/m/n/10 GAL lat-tice file `\T1/zi4/m/sl/10 usc_q.GAL\T1/ptm/m/n/10 ' ( re-trieved in 2008 from `\T1/zi4/m/sl/10 http://sal.uiuc.edu/weights/zips/usc.z ip\T1/ptm/m/n/10 ' [2510] [2511] [2512]) (./boot-pkg.tex Chapter 18. [2513] [2514] [2515] [2516] [2517] [2518] [2519] [2520] [2521] [2522] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2523] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2524] Underfull \vbox (badness 10000) has occurred while \output is active [2525] [2526] [2527] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2528] [2529] [2530] [2531] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2532] [2533] [2534] [2535] [2536] [2537] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/sl/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2538] [2539] Underfull \vbox (badness 10000) has occurred while \output is active [2540] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2541] [2542] [2543] [2544] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2545] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2546] [2547] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /sl/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/sl/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/sl/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/sl/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2548] [2549] [2550] [2551] [2552] [2553] [2554] [2555] [2556] [2557] [2558] [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] [2569] [2570] [2571] [2572] [2573] [2574] [2575] [2576] [2577] [2578] [2579] [2580] [2581] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2582] [2583] [2584] [2585] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2586] [2587] [2588] [2589] [2590] [2591] [2592] [2593] [2594] [2595] [2596] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/sl/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2597] [2598] [2599] [2600] [2601] [2602] [2603] [2604] [2605] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2606] [2607] [2608] [2609] [2610] [2611] [2612] [2613] [2614] [2615]) (./class-pkg.tex [2616] Chapter 19. [2617] [2618] [2619] [2620] [2621] [2622] [2623] [2624] [2625] [2626] [2627] [2628] [2629] [2630] [2631] [2632]) (./cluster-pkg.tex Chapter 20. [2633] [2634] [2635] [2636] [2637] [2638] [2639] [2640] [2641] [2642] [2643] [2644] Underfull \hbox (badness 1412) in paragraph at lines 782--787 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/sl/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/sl/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2645] Underfull \hbox (badness 10000) in paragraph at lines 882--884 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2646] [2647] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2648] [2649] [2650] [2651] [2652] [2653] Underfull \hbox (badness 10000) in paragraph at lines 1474--1477 [2654] [2655] Underfull \hbox (badness 2503) in paragraph at lines 1583--1586 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/sl/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2656] Underfull \hbox (badness 4954) in paragraph at lines 1680--1682 []\T1/ptm/b/n/10 A\T1/ptm/m/n/10 symmetric bi-nary vari-able, aka []\T1/zi4/m/s l/10 "A" []\T1/ptm/m/n/10 in re-sult []\T1/zi4/m/sl/10 Types[]\T1/ptm/m/n/10 , see [2657] Underfull \hbox (badness 7667) in paragraph at lines 1694--1698 []\T1/ptm/b/n/10 I\T1/ptm/m/n/10 nterval scaled -- the \T1/ptm/b/n/10 de-fault \T1/ptm/m/n/10 for all nu-meric Underfull \hbox (badness 10000) in paragraph at lines 1694--1698 \T1/ptm/m/n/10 (incl []\T1/zi4/m/sl/10 integer[]\T1/ptm/m/n/10 ) columns of []\ T1/zi4/m/sl/10 x[]\T1/ptm/m/n/10 , aka []\T1/zi4/m/sl/10 "I" []\T1/ptm/m/n/10 i n re-sult []\T1/zi4/m/sl/10 Types[]\T1/ptm/m/n/10 , see [2658] [2659] Overfull \hbox (5.24408pt too wide) in paragraph at lines 1866--1866 []\T1/zi4/m/n/9 summary(dA123 <- daisy(flowerN)) # .. all 3 logicals treated * A*symmetric binary (w/ warning)[] Overfull \hbox (11.23795pt too wide) in paragraph at lines 1877--1877 []\T1/zi4/m/n/9 ## Still, using Euclidean/Manhattan distance for {0-1} *is* id entical to treating them as "N" :[] [2660] [2661] [2662] [2663] [2664] Underfull \hbox (badness 10000) in paragraph at lines 2212--2215 Underfull \hbox (badness 10000) in paragraph at lines 2223--2229 [][][]\T1/zi4/m/sl/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/sl/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/s l/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2665] [2666] [2667] [2668] Underfull \hbox (badness 6675) in paragraph at lines 2457--2459 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2669] [2670] [2671] [2672] [2673] [2674] [2675] [2676] Underfull \hbox (badness 2980) in paragraph at lines 3059--3063 [][][]\T1/zi4/m/sl/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/sl/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 partition.object[][][][]\T1/ptm/m/n/10 , [2677] [2678] [2679] [2680] [2681] [2682] Underfull \hbox (badness 1142) in paragraph at lines 3398--3401 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/sl/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2683] Underfull \hbox (badness 1142) in paragraph at lines 3517--3520 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/sl/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2684] [2685] [2686] [2687] Underfull \hbox (badness 2582) in paragraph at lines 3740--3745 [][][]\T1/zi4/m/sl/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/sl/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl /10 clara[][][][]\T1/ptm/m/n/10 , [2688] Underfull \hbox (badness 2698) in paragraph at lines 3802--3807 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/sl/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3802--3807 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/sl/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/sl/10 x x <- [2689] Underfull \hbox (badness 10000) in paragraph at lines 3875--3877 []\T1/ptm/m/n/10 Available as `\T1/zi4/m/sl/10 pluton.dat\T1/ptm/m/n/10 ' from the archive of the Uni-ver-sity of Antwer-pen, [2690] [2691] [2692] Underfull \hbox (badness 10000) in paragraph at lines 4089--4091 []\T1/ptm/m/n/10 a []\T1/zi4/m/sl/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/sl/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2693] [2694] [2695] [2696] Underfull \hbox (badness 2626) in paragraph at lines 4318--4323 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/sl/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/sl/10 col = [2697] Underfull \hbox (badness 1383) in paragraph at lines 4395--4400 []\T1/ptm/m/n/10 While []\T1/zi4/m/sl/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/sl/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2698] [2699] [2700] [2701] [2702] [2703] [2704] [2705] Underfull \hbox (badness 10000) in paragraph at lines 4836--4838 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/sl/10 xclara.dat\T1/ptm/m/n/10 ' in side [2706] [2707]) (./codetools-pkg.tex [2708] Chapter 21. [2709] [2710] [2711] [2712] [2713]) (./foreign-pkg.tex [2714] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/sl/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/sl/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/sl/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2715] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/sl/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2716] [2717] [2718] [2719] [2720] [2721] [2722] Underfull \hbox (badness 2846) in paragraph at lines 502--511 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 502--511 \T1/ptm/m/n/10 els. For []\T1/zi4/m/sl/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 502--511 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/sl/10 paste0(label, [2723] Overfull \hbox (6.73795pt too wide) in paragraph at lines 620--620 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2724] [2725] [2726] Underfull \hbox (badness 10000) in paragraph at lines 808--809 [2727] Underfull \hbox (badness 10000) in paragraph at lines 865--869 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 865--869 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/sl/10 https : Underfull \hbox (badness 10000) in paragraph at lines 865--869 \T1/zi4/m/sl/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 865--869 \T1/zi4/m/sl/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2728] [2729] Underfull \hbox (badness 10000) in paragraph at lines 986--988 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/sl/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2730] [2731] [2732] [2733] Underfull \hbox (badness 10000) in paragraph at lines 1265--1271 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/sl/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2734] [2735]) (./lattice-pkg.tex [2736] Chapter 23. [2737] Underfull \hbox (badness 1484) in paragraph at lines 114--118 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 114--118 \T1/zi4/m/sl/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2738] [2739] [2740] Underfull \vbox (badness 10000) has occurred while \output is active [2741] [2742] [2743] [2744] [2745] [2746] [2747] [2748] [2749] [2750] [2751] [2752] [2753] Underfull \hbox (badness 1062) in paragraph at lines 1395--1399 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2754] Underfull \vbox (badness 4805) has occurred while \output is active [2755] Underfull \hbox (badness 1803) in paragraph at lines 1563--1580 [][][]\T1/zi4/m/sl/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/sl/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1563--1580 [][][]\T1/zi4/m/sl/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/sl/10 strip.default[][][][]\T1/ptm/m/n/10 , [2756] [2757] Underfull \hbox (badness 3009) in paragraph at lines 1705--1707 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/sl/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1735--1739 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2758] [2759] [2760] [2761] [2762] [2763] Underfull \hbox (badness 10000) in paragraph at lines 2137--2140 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2764] [2765] [2766] [2767] [2768] [2769] [2770] [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] [2773] Underfull \hbox (badness 2781) in paragraph at lines 2871--2873 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/sl/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2774] Underfull \hbox (badness 2486) in paragraph at lines 3021--3025 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2775] [2776] [2777] [2778] [2779] [2780] [2781] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.parallel} ) has been already used, duplicate ignored \relax l.3506 \aliasA{parallel}{B\_08\_splom}{parallel} [2782] [2783] Underfull \hbox (badness 2368) in paragraph at lines 3644--3644 []\T1/zi4/m/sl/10 auto.key[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 prepanel[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 scales[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 strip[] \T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 groups[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 x lab[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 xlim[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/1 0 ylab[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 ylim[]\T1/ptm/m/n/10 , [2784] [2785] [2786] [2787] [2788] Underfull \hbox (badness 5696) in paragraph at lines 3992--3996 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3992--3996 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/sl/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3992--3996 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2789] [2790] [2791] Underfull \hbox (badness 1389) in paragraph at lines 4175--4183 \T1/ptm/m/n/10 based on HCL palettes, but cus-tomiza-tion of the palettes is al -lowed. Ear-lier be-haviour [2792] Underfull \hbox (badness 1173) in paragraph at lines 4251--4255 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in Underfull \hbox (badness 3219) in paragraph at lines 4278--4280 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2793] [2794] [2795] Underfull \hbox (badness 3492) in paragraph at lines 4478--4488 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/sl/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/sl/10 "plot.symbol"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4503--4506 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/sl/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4506--4508 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/sl/10 plot.polygon []\T1/ptm/m/n/10 and [2796] [2797] [2798] [2799] [2800] [2801] [2802] Underfull \vbox (badness 10000) has occurred while \output is active [2803] [2804] [2805] Underfull \hbox (badness 6157) in paragraph at lines 5232--5235 []\T1/zi4/m/sl/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/sl/10 print.shingle []\T1/ptm/m/n/10 and [2806] [2807] [2808] [2809] [2810] [2811] [2812] Underfull \hbox (badness 10000) in paragraph at lines 5684--5687 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5684--5687 []\T1/zi4/m/sl/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2813] [2814] [2815] [2816] [2817] Underfull \hbox (badness 4805) in paragraph at lines 6045--6049 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 6056--6063 []\T1/ptm/m/n/10 For []\T1/zi4/m/sl/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 6056--6063 []\T1/zi4/m/sl/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/sl/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 6056--6063 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/sl/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 6056--6063 []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 6056--6063 [][][]\T1/zi4/m/sl/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2818] [2819] [2820] [2821] Underfull \hbox (badness 4242) in paragraph at lines 6356--6361 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6356--6361 \T1/ptm/m/n/10 ter []\T1/zi4/m/sl/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2822] [2823] Underfull \hbox (badness 2310) in paragraph at lines 6472--6477 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/sl/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/sl/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2824] [2825] [2826] [2827] [2828] [2829] [2830] [2831] [2832] [2833] [2834] [2835] Underfull \hbox (badness 3168) in paragraph at lines 7330--7334 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2836] [2837] [2838] [2839] Underfull \hbox (badness 2012) in paragraph at lines 7601--7604 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2840] [2841] [2842] Underfull \hbox (badness 3333) in paragraph at lines 7808--7810 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/sl/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 plot.line []\T1/ptm/m/n/10 us-ing Underfull \hbox (badness 2318) in paragraph at lines 7836--7844 []\T1/zi4/m/sl/10 "spline" []\T1/ptm/m/n/10 adds a cu-bic smooth-ing spline fit (same as [][][]\T1/zi4/m/sl/10 panel.spline[][][][]\T1/ptm/m/n/10 ). [2843] [2844] [2845] [2846] [2847] [2848] [2849] Underfull \hbox (badness 1436) in paragraph at lines 8309--8315 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2850] [2851] [2852] [2853] [2854] [2855] [2856] [2857] Underfull \hbox (badness 10000) in paragraph at lines 8878--8881 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/sl/10 panel.supe rpose []\T1/ptm/m/n/10 from Underfull \hbox (badness 1092) in paragraph at lines 8924--8926 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/sl/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/sl/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2858] [2859] [2860] Underfull \hbox (badness 3895) in paragraph at lines 9085--9088 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/sl/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in Underfull \hbox (badness 6625) in paragraph at lines 9095--9095 []\T1/zi4/m/sl/10 perspective[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 distance[]\T1 /ptm/m/n/10 , []\T1/zi4/m/sl/10 xlim[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 ylim[] \T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 zlim[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 scr een[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 R.mat[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/ 10 aspect[]\T1/ptm/m/n/10 , [2861] Underfull \hbox (badness 1515) in paragraph at lines 9160--9164 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2862] Underfull \hbox (badness 6316) in paragraph at lines 9266--9271 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in [2863] Underfull \hbox (badness 5908) in paragraph at lines 9283--9286 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/sl/10 xscale .components.default []\T1/ptm/m/n/10 and [2864] [2865] [2866] [2867] Underfull \hbox (badness 2418) in paragraph at lines 9574--9578 []\T1/ptm/m/n/10 returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/sl/10 left, right, left.name, right.name, [2868] [2869] [2870] [2871] [2872] [2873] [2874] Underfull \hbox (badness 2310) in paragraph at lines 10018--10022 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/sl/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/s l/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 10023--10026 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/sl/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/sl/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Morris"[]\T1/ptm/m/n/10 , [2875] [2876] [2877] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma} ) has been already used, duplicate ignored \relax l.10249 \aliasA{melanoma}{H\_melanoma}{melanoma} [2878] [2879] [2880] Underfull \hbox (badness 4144) in paragraph at lines 10473--10476 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10473--10476 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/sl /10 https : / / ruralhealth . und . edu / projects / [2881] [2882]) (./mgcv-pkg.tex Chapter 24. [2883] [2884] [2885] Underfull \hbox (badness 1142) in paragraph at lines 185--189 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 210--215 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2886] [2887] [2888] [2889] Underfull \hbox (badness 10000) in paragraph at lines 379--386 [][][]\T1/zi4/m/sl/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/sl/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 379--386 [][][]\T1/zi4/m/sl/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/sl/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/sl/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/sl/10 gam.side[][][][]\T1/ptm/m/n/10 , [2890] [2891] [2892] [2893] [2894] [2895] Underfull \hbox (badness 1406) in paragraph at lines 704--705 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2896] [2897] Underfull \hbox (badness 1158) in paragraph at lines 814--816 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion [2898] Underfull \hbox (badness 1259) in paragraph at lines 877--878 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2899] Underfull \vbox (badness 10000) has occurred while \output is active [2900] [2901] [2902] [2903] [2904] [2905] Underfull \hbox (badness 1281) in paragraph at lines 1272--1273 []\T1/zi4/m/sl/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/sl/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/sl/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/sl/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2906] [2907] Underfull \vbox (badness 10000) has occurred while \output is active [2908] Underfull \vbox (badness 10000) has occurred while \output is active [2909] [2910] Underfull \vbox (badness 10000) has occurred while \output is active [2911] [2912] [2913] [2914] [2915] [2916] [2917] [2918] [2919] [2920] [2921] [2922] [2923] [2924] [2925] [2926] [2927] [2928] Underfull \hbox (badness 1142) in paragraph at lines 2604--2608 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2929] Underfull \hbox (badness 1043) in paragraph at lines 2630--2636 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2930] [2931] [2932] [2933] [2934] [2935] Underfull \vbox (badness 10000) has occurred while \output is active [2936] Underfull \vbox (badness 10000) has occurred while \output is active [2937] [2938] [2939] [2940] [2941] [2942] [2943] [2944] [2945] [2946] [2947] [2948] [2949] [2950] [2951] [2952] [2953] Underfull \hbox (badness 10000) in paragraph at lines 4071--4075 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/sl/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/sl/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2954] [2955] Underfull \vbox (badness 10000) has occurred while \output is active [2956] [2957] [2958] Underfull \hbox (badness 1184) in paragraph at lines 4358--4362 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2959] [2960] [2961] [2962] [2963] [2964] [2965] [2966] [2967] [2968] [2969] [2970] Underfull \hbox (badness 1142) in paragraph at lines 5081--5085 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2971] Underfull \hbox (badness 1231) in paragraph at lines 5185--5187 []\T1/zi4/m/sl/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/sl/10 gam []\T1/ptm/m/n/10 wit h [2972] [2973] [2974] Underfull \vbox (badness 10000) has occurred while \output is active [2975] [2976] [2977] [2978] Underfull \hbox (badness 2181) in paragraph at lines 5626--5627 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2979] [2980] [2981] [2982] [2983] [2984] [2985] [2986] [2987] Underfull \hbox (badness 10000) in paragraph at lines 6130--6131 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/sl/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2988] [2989] [2990] [2991] [2992] [2993] [2994] [2995] [2996] [2997] [2998] Underfull \hbox (badness 1142) in paragraph at lines 6715--6719 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2999] [3000] [3001] Underfull \vbox (badness 10000) has occurred while \output is active [3002] [3003] [3004] [3005] Underfull \hbox (badness 1087) in paragraph at lines 7087--7088 []\T1/ptm/m/n/10 If []\T1/zi4/m/sl/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [3006] [3007] [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] Underfull \vbox (badness 10000) has occurred while \output is active [3010] [3011] [3012] [3013] [3014] [3015] [3016] [3017] [3018] [3019] [3020] [3021] Underfull \hbox (badness 1242) in paragraph at lines 8046--8047 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [3022] Underfull \hbox (badness 1122) in paragraph at lines 8072--8073 []\T1/ptm/m/n/10 When us-ing [][][]\T1/zi4/m/sl/10 NCV[][][] []\T1/ptm/m/n/10 w ith [][][]\T1/zi4/m/sl/10 gam[][][] []\T1/ptm/m/n/10 worth-while per-for-mance im-prove-ments are avail-able by set-ting [3023] [3024] [3025] [3026] [3027] [3028] [3029] [3030] [3031] [3032] [3033] [3034] [3035] Underfull \hbox (badness 6001) in paragraph at lines 8785--8787 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/sl/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [3036] [3037] [3038] [3039] [3040] [3041] [3042] [3043] [3044] [3045] Underfull \vbox (badness 10000) has occurred while \output is active [3046] [3047] Underfull \hbox (badness 1038) in paragraph at lines 9533--9536 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/sl/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9533--9536 []\T1/zi4/m/sl/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [3048] Underfull \hbox (badness 10000) in paragraph at lines 9589--9592 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/sl/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/sl/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [3049] [3050] [3051] [3052] [3053] [3054] [3055] [3056] [3057] [3058] [3059] Underfull \hbox (badness 1852) in paragraph at lines 10261--10264 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/sl/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/sl/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/sl/10 "para.only" []\T1/ptm/m/n/10 and [3060] [3061] [3062] Underfull \hbox (badness 1852) in paragraph at lines 10430--10433 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/sl/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/sl/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/sl/10 "para.only" []\T1/ptm/m/n/10 and [3063] [3064] Underfull \vbox (badness 10000) has occurred while \output is active [3065] [3066] Underfull \hbox (badness 1205) in paragraph at lines 10670--10671 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10670--10671 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10676--10681 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3067] Underfull \hbox (badness 1205) in paragraph at lines 10760--10761 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10760--10761 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [3068] [3069] [3070] Underfull \hbox (badness 1253) in paragraph at lines 10959--10961 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [3071] [3072] [3073] [3074] [3075] [3076] Underfull \hbox (badness 4792) in paragraph at lines 11220--11223 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/s l/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/sl/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 11220--11223 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/sl/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [3077] Underfull \hbox (badness 10000) in paragraph at lines 11327--11330 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/sl /10 "deviance"[]\T1/ptm/m/n/10 , [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] [3086] [3087] [3088] [3089] [3090] [3091] Underfull \hbox (badness 3861) in paragraph at lines 12118--12121 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3092] [3093] Underfull \hbox (badness 1320) in paragraph at lines 12233--12238 \T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/sl/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3094] Underfull \hbox (badness 1975) in paragraph at lines 12339--12344 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3095] [3096] Underfull \hbox (badness 1762) in paragraph at lines 12428--12440 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/sl/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/sl/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3097] [3098] [3099] Underfull \hbox (badness 7667) in paragraph at lines 12640--12646 [][][]\T1/zi4/m/sl/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3100] Underfull \hbox (badness 10000) in paragraph at lines 12681--12682 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3101] [3102] [3103] [3104] Underfull \vbox (badness 10000) has occurred while \output is active [3105] Underfull \hbox (badness 10000) in paragraph at lines 12958--12960 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3106] [3107] Underfull \hbox (badness 10000) in paragraph at lines 13088--13089 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3108] [3109] [3110] Underfull \hbox (badness 1436) in paragraph at lines 13224--13231 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/sl/10 gamm []\T1/ptm/m/n/10 only al-lows one [3111] [3112] Underfull \hbox (badness 10000) in paragraph at lines 13323--13324 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] Underfull \hbox (badness 10000) in paragraph at lines 13924--13930 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13924--13930 []\T1/zi4/m/sl/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/sl/10 gam []\T1/ptm/m/n/10 for-mula. Note [3123] [3124] [3125] Underfull \vbox (badness 10000) has occurred while \output is active [3126] Underfull \vbox (badness 10000) has occurred while \output is active [3127] [3128] Underfull \hbox (badness 10000) in paragraph at lines 14268--14269 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3129] [3130] [3131] [3132] Overfull \hbox (35.26862pt too wide) in paragraph at lines 14480--14480 []\T1/zi4/m/n/9 b <- gam(y ~ s(x)+s(f1,x,bs="sz")+s(f2,x,bs="sz")+s(f1,f2,x,bs ="sz",id=1),data=dat,method="REML")[] [3133] [3134] Underfull \hbox (badness 3895) in paragraph at lines 14626--14629 [][][]\T1/zi4/m/sl/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3135] Underfull \hbox (badness 10000) in paragraph at lines 14671--14673 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3136] [3137] [3138] [3139] [3140] Underfull \hbox (badness 1371) in paragraph at lines 14951--14957 []\T1/zi4/m/sl/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14962--14964 []\T1/zi4/m/sl/10 bs="fs" []\T1/ptm/m/n/10 A spe-cial smoother class (see Underfull \hbox (badness 1132) in paragraph at lines 14962--14964 [][][]\T1/zi4/m/sl/10 smooth.construct.fs.smooth.spec[][][][]\T1/ptm/m/n/10 ) i s avail-able for the case in which a smooth is [3141] Underfull \hbox (badness 6461) in paragraph at lines 14996--15000 [][][]\T1/zi4/m/sl/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 t2[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 tprs[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Duchon.spline[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 cubic.regression.spline[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/sl/10 p.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4 /m/sl/10 d.spline[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14996--15000 [][][]\T1/zi4/m/sl/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14996--15000 [][][]\T1/zi4/m/sl/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/sl/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 , [3142] [3143] [3144] [3145] Underfull \hbox (badness 2326) in paragraph at lines 15200--15207 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/sl/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3146] Underfull \hbox (badness 2158) in paragraph at lines 15285--15285 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3147] [3148] [3149] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] Underfull \vbox (badness 10000) has occurred while \output is active [3158] [3159] [3160] [3161] [3162] [3163] [3164] [3165] [3166] [3167] [3168] [3169] [3170] [3171] Overfull \hbox (21.42029pt too wide) in paragraph at lines 16847--16847 []\T1/zi4/m/sl/10 vcov(object, sandwich=FALSE, freq = FALSE, dispersion = NULL ,unconditional=FALSE, ...)[] [3172] [3173] [3174] Underfull \hbox (badness 1796) in paragraph at lines 16960--16963 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/sl/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/sl/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3175] [3176] [3177] [3178] [3179] [3180] [3181] [3182] [3183]) (./nlme-pkg.tex [3184] Chapter 25. [3185] [3186] [3187] [3188] [3189] [3190] [3191] [3192] [3193] [3194] [3195] [3196] [3197] [3198] [3199] [3200] [3201] [3202] [3203] [3204] [3205] [3206] [3207] [3208] [3209] [3210] [3211] [3212] [3213] [3214] [3215] [3216] [3217] [3218] Underfull \hbox (badness 10000) in paragraph at lines 2252--2258 [][][]\T1/zi4/m/sl/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/sl/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3219] [3220] [3221] [3222] [3223] [3224] [3225] [3226] [3227] [3228] [3229] [3230] [3231] [3232] [3233 pdfTeX warning (ext4): destination with the same identifier (name{Rfn.corMatrix .corCompSymm}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.3186 ] [3234] [3235] [3236] [3237] [3238] [3239] [3240] [3241] [3242] [3243] [3244] [3245] [3246] [3247] [3248] [3249] [3250] [3251] Underfull \hbox (badness 1067) in paragraph at lines 4411--4416 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/sl/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/sl/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3252] [3253] [3254] [3255] [3256] [3257] [3258] [3259] [3260] [3261] [3262] [3263] Underfull \hbox (badness 10000) in paragraph at lines 5157--5161 [][][]\T1/zi4/m/sl/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/sl/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3264] [3265] [3266] [3267] [3268] [3269] [3270] Underfull \hbox (badness 10000) in paragraph at lines 5591--5594 [][][]\T1/zi4/m/sl/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3271] [3272] [3273] [3274] [3275] [3276] [3277] Underfull \hbox (badness 10000) in paragraph at lines 5972--5977 [][][]\T1/zi4/m/sl/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3278] [3279] [3280] [3281] Underfull \hbox (badness 1490) in paragraph at lines 6247--6258 [][][]\T1/zi4/m/sl/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/sl/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3282] Underfull \hbox (badness 10000) in paragraph at lines 6311--6313 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3283] [3284] [3285] [3286] [3287] [3288] Underfull \hbox (badness 10000) in paragraph at lines 6720--6722 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3289] [3290] [3291] [3292] Underfull \hbox (badness 10000) in paragraph at lines 6989--6996 [][][]\T1/zi4/m/sl/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/sl/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3293] [3294] [3295] [3296] Underfull \hbox (badness 10000) in paragraph at lines 7249--7254 [][][]\T1/zi4/m/sl/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] [3308] [3309] [3310] [3311] [3312] [3313] [3314] [3315] Underfull \hbox (badness 10000) in paragraph at lines 8531--8533 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3316] [3317] [3318] [3319] [3320] Underfull \hbox (badness 10000) in paragraph at lines 8816--8823 [][][]\T1/zi4/m/sl/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3321] [3322] [3323] [3324] [3325] [3326] [3327] [3328] Underfull \hbox (badness 10000) in paragraph at lines 9337--9344 [][][]\T1/zi4/m/sl/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/sl/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/sl/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3329] [3330] [3331] [3332] [3333] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9699 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix.1} ) has been already used, duplicate ignored \relax l.9699 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3334] [3335] [3336] [3337] [3338] [3339] [3340] [3341] [3342] [3343] [3344] [3345] Underfull \hbox (badness 1596) in paragraph at lines 10476--10502 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3346] [3347] Underfull \hbox (badness 1490) in paragraph at lines 10592--10598 [][][]\T1/zi4/m/sl/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/sl/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 reStruct[][][][]\T1/ptm/m/n/10 , [3348] [3349] [3350] Underfull \hbox (badness 10000) in paragraph at lines 10833--10835 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3351] [3352] [3353] [3354] [3355] [3356] [3357] [3358] [3359] [3360] [3361] [3362] [3363] [3364] [3365] [3366] [3367] [3368] [3369] [3370] [3371] [3372] [3373] [3374] [3375] [3376] [3377] [3378] [3379] [3380] [3381] [3382] [3383] [3384] [3385] [3386] [3387] [3388] [3389] [3390] [3391] [3392] [3393] Underfull \hbox (badness 1286) in paragraph at lines 13736--13743 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ sl/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/sl/10 inner []\T1/ptm/m/n/1 0 or [3394] [3395] [3396] [3397] [3398] [3399] [3400] [3401] [3402] [3403] [3404] [3405] [3406] [3407] [3408] [3409] [3410] [3411] [3412] [3413] [3414] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects}) has been already used, duplicate ignored \relax l.15179 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects.1}) has been already used, duplicate ignored \relax l.15179 ...Extract Random Effects}{random.effects} [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] [3423] [3424] [3425] [3426] Underfull \hbox (badness 1067) in paragraph at lines 15932--15937 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/sl/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/sl/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3427] [3428] [3429] [3430] Underfull \hbox (badness 1448) in paragraph at lines 16175--16184 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/sl/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3431] [3432] [3433] [3434] [3435] [3436] [3437] [3438] [3439] [3440] Underfull \hbox (badness 1728) in paragraph at lines 16878--16881 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3441] [3442] [3443] [3444] Underfull \hbox (badness 8056) in paragraph at lines 17212--17221 \T1/zi4/m/sl/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17212--17221 \T1/zi4/m/sl/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17212--17221 \T1/zi4/m/sl/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3445] [3446] [3447] [3448] [3449] Underfull \hbox (badness 10000) in paragraph at lines 17534--17542 [][][]\T1/zi4/m/sl/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/sl/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 varPower[][][][]\T1/ptm/m/n/10 , [3450] [3451] [3452] [3453] [3454] [3455] [3456] [3457] [3458] [3459] [3460] Underfull \hbox (badness 10000) in paragraph at lines 18244--18254 [][][]\T1/zi4/m/sl/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ sl/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18244--18254 [][][]\T1/zi4/m/sl/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/sl/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3461] [3462] [3463] [3464] [3465] Underfull \hbox (badness 5036) in paragraph at lines 18568--18577 [][][]\T1/zi4/m/sl/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3466] [3467] [3468] [3469] [3470] [3471] [3472] [3473] [3474] [3475] [3476] [3477] [3478]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom. 1}) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3479] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/sl/10 response ~ [3480] [3481] [3482] [3483] [3484] [3485] [3486]) (./rpart-pkg.tex Chapter 27. [3487] [3488] [3489] [3490] [3491] [3492] [3493] [3494] [3495] [3496] Underfull \hbox (badness 10000) in paragraph at lines 771--775 []\T1/ptm/m/n/10 Logical. If []\T1/zi4/m/sl/10 TRUE []\T1/ptm/m/n/10 (de-fault) , adds to the la-bel Underfull \hbox (badness 1348) in paragraph at lines 771--775 \T1/zi4/m/sl/10 #events level1/ #events level2/ \T1/ptm/m/n/10 etc. for method []\T1/zi4/m/sl/10 class[]\T1/ptm/m/n/10 , \T1/zi4/m/sl/10 n \T1/ptm/m/n/10 for [3497] [3498] [3499] [3500] [3501] [3502] [3503] [3504] [3505] [3506] [3507] [3508] [3509] [3510] [3511] [3512] [3513] [3514] [3515]) (./spatial-pkg.tex [3516] Chapter 28. [3517] [3518] [3519] [3520] [3521] [3522] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3523] [3524] [3525] [3526] [3527] [3528] [3529] [3530] [3531] [3532] [3533] [3534] [3535]) (./survival-pkg.tex [3536] Chapter 29. [3537] [3538] [3539] [3540] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3541] [3542] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml.1}) h as been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3543] [3544] [3545] [3546] [3547] [3548] [3549] [3550] [3551] [3552] [3553] [3554] Underfull \hbox (badness 1097) in paragraph at lines 1205--1207 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3555] [3556] [3557] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) h as been already used, duplicate ignored \relax l.1407 ...erapy for Stage B/C colon cancer}{colon} [3558] Underfull \hbox (badness 3679) in paragraph at lines 1455--1459 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/sl/10 table(colon$nodes, [3559] [3560] [3561] [3562] [3563] [3564] [3565] [3566] [3567] [3568] Underfull \hbox (badness 3250) in paragraph at lines 2143--2158 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/sl/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 2143--2158 []\T1/zi4/m/sl/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3569] [3570] [3571] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] [3581] [3582] [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] Underfull \hbox (badness 1389) in paragraph at lines 3663--3665 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3591] [3592] [3593] [3594] Overfull \hbox (467.89665pt too wide) in alignment at lines 3949--3949 [] [] [3595] [3596] [3597] [3598] [3599] [3600] [3601] [3602] [3603] [3604] [3605] [3606] [3607] [3608] [3609] [3610] [3611] [3612] [3613] [3614] [3615] [3616] [3617] [3618] [3619] [3620] Underfull \hbox (badness 5274) in paragraph at lines 5718--5720 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/sl/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3621] [3622] [3623] [3624] [3625] [3626] [3627] [3628] [3629] [3630] [3631] [3632] [3633] [3634] [3635] [3636] [3637] [3638] Underfull \hbox (badness 1281) in paragraph at lines 6986--6989 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/sl/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "dfbeta"[]\T1/ptm/m/n/10 , [3639] [3640] [3641] [3642] [3643] [3644] [3645] [3646] [3647] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solder}) has been already used, duplicate ignored \relax l.7569 ...ata from a soldering experiment}{solder} [3648] [3649] [3650] [3651] [3652] [3653] [3654] [3655] [3656] [3657] [3658] [3659] [3660] [3661] [3662] [3663] [3664] [3665] [3666] [3667] [3668] [3669] [3670] Underfull \hbox (badness 1038) in paragraph at lines 9202--9208 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3671] [3672] [3673] [3674] [3675] Underfull \hbox (badness 10000) in paragraph at lines 9560--9565 [][][]\T1/zi4/m/sl/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3676] [3677] [3678] [3679] [3680] Underfull \hbox (badness 4441) in paragraph at lines 9950--9960 []\T1/ptm/m/n/10 by de-fault, the surv-fit rou-tines only re-turn in-for-ma-tio n at the [3681] [3682] Underfull \hbox (badness 1490) in paragraph at lines 10125--10134 [][][]\T1/zi4/m/sl/10 survfit.coxph[][][] []\T1/ptm/m/n/10 for sur-vival curves from Cox mod-els, [][][]\T1/zi4/m/sl/10 survfit.object[][][] []\T1/ptm/m/n/10 for a de-scrip-tion Underfull \hbox (badness 2213) in paragraph at lines 10125--10134 \T1/ptm/m/n/10 of the com-po-nents of a surv-fit ob-ject, [][][]\T1/zi4/m/sl/10 print.survfit[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 plot.survfit[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 lines.survfit[][][][]\T1/ptm/m/n/10 , [3683] [3684] [3685] [3686] [3687] [3688] [3689] Underfull \hbox (badness 1354) in paragraph at lines 10623--10627 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. It gives th e time range [3690] [3691] [3692] [3693] [3694] [3695] [3696] [3697] [3698] [3699] [3700] [3701] [3702] [3703] [3704] [3705] [3706] [3707] [3708] [3709] [3710] [3711] [3712] [3713]) [3714] (./fullrefman.ind [3715] [3716] [3717] [3718] [3719] [3720] [3721] [3722] [3723] [3724] [3725] [3726] [3727] [3728] [3729] [3730] [3731] [3732] [3733] [3734] [3735] [3736] [3737] [3738] [3739] [3740] [3741] Overfull \hbox (8.3567pt too wide) in paragraph at lines 2898--2900 []| \T1/zi4/m/it/10 smooth.construct.tensor.smooth.spec\T1/ptm/m/n/10 , [3742] [3743] [3744] [3745] [3746] [3747] [3748] Overfull \hbox (8.3567pt too wide) in paragraph at lines 3550--3552 []| \T1/zi4/m/it/10 smooth.construct.tensor.smooth.spec\T1/ptm/m/n/10 , [3749] [3750] [3751] [3752] [3753] [3754] [3755] [3756] [3757] [3758] [3759] Overfull \hbox (5.8567pt too wide) in paragraph at lines 4955--4957 []\T1/zi4/m/it/10 [,Matrix,lMatrix,missing,missing-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 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wide) in paragraph at lines 5497--5499 []\T1/zi4/m/it/10 %&%,RsparseMatrix,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 5499--5501 []\T1/zi4/m/it/10 %&%,RsparseMatrix,TsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5503--5505 []\T1/zi4/m/it/10 %&%,RsparseMatrix,diagonalMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 5509--5511 []\T1/zi4/m/it/10 %&%,TsparseMatrix,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 5511--5513 []\T1/zi4/m/it/10 %&%,TsparseMatrix,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 5513--5515 []\T1/zi4/m/it/10 %&%,TsparseMatrix,TsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5517--5519 []\T1/zi4/m/it/10 %&%,TsparseMatrix,diagonalMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5537--5539 []\T1/zi4/m/it/10 %&%,diagonalMatrix,CsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5539--5541 []\T1/zi4/m/it/10 %&%,diagonalMatrix,RsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 5541--5543 []\T1/zi4/m/it/10 %&%,diagonalMatrix,TsparseMatrix-method [3764] Overfull \hbox (10.8567pt too wide) in paragraph at lines 5545--5547 []\T1/zi4/m/it/10 %&%,diagonalMatrix,diagonalMatrix-method [3765] Overfull \hbox (15.01662pt too wide) in paragraph at lines 5815--5817 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ad.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3766] Overfull \hbox (20.8567pt too wide) in paragraph at lines 5969--5971 []\T1/zi4/m/it/10 all.equal,sparseVector,sparseVector-method [3767] Overfull \hbox (10.8567pt too wide) in paragraph at lines 6222--6224 []\T1/zi4/m/it/10 Arith,CsparseMatrix,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 6230--6232 []\T1/zi4/m/it/10 Arith,ddenseMatrix,sparseVector-method [3768] Overfull \hbox (10.8567pt too wide) in paragraph at lines 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(15.01662pt too wide) in paragraph at lines 7031--7033 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3772] [3773] [3774] [3775] [3776] [3777] [3778] [3779] Overfull \hbox (30.8567pt too wide) in paragraph at lines 8535--8537 []\T1/zi4/m/it/10 coerce,diagonalMatrix,symmetricMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 8537--8539 []\T1/zi4/m/it/10 coerce,diagonalMatrix,triangularMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8557--8559 []\T1/zi4/m/it/10 coerce,generalMatrix,packedMatrix-method [3780] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8703--8705 []\T1/zi4/m/it/10 coerce,matrix.coo,CsparseMatrix-method [3781] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8711--8713 []\T1/zi4/m/it/10 coerce,matrix.coo,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8715--8717 []\T1/zi4/m/it/10 coerce,matrix.coo,TsparseMatrix-method Overfull 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coerce,sparseVector,TsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8787--8789 []\T1/zi4/m/it/10 coerce,sparseVector,unpackedMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8789--8791 []\T1/zi4/m/it/10 coerce,sparseVector,zsparseVector-method [3782] Overfull \hbox (20.8567pt too wide) in paragraph at lines 8963--8965 []\T1/zi4/m/it/10 Compare,CsparseMatrix,CsparseMatrix-method [3783] Overfull \hbox (40.8567pt too wide) in paragraph at lines 8995--8997 []\T1/zi4/m/it/10 Compare,triangularMatrix,diagonalMatrix-method [3784] [3785] Overfull \hbox (30.8567pt too wide) in paragraph at lines 9532--9534 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,CsparseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 9534--9536 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,denseMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 9536--9538 []\T1/zi4/m/it/10 crossprod,CsparseMatrix,diagonalMatrix-method Overfull \hbox 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crossprod,denseMatrix,TsparseMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 9564--9566 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,CsparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 9566--9568 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,denseMatrix-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 9568--9570 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,diagonalMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 9570--9572 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,matrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 9572--9574 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,missing-method [3786] Overfull \hbox (35.8567pt too wide) in paragraph at lines 9574--9576 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,RsparseMatrix-method Overfull \hbox (35.8567pt too wide) in paragraph at lines 9576--9578 []\T1/zi4/m/it/10 crossprod,diagonalMatrix,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) 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crossprod,vector,diagonalMatrix-method [3787] Overfull \hbox (15.01662pt too wide) in paragraph at lines 9711--9713 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.cr.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 9775--9777 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.cr.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 9780--9782 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ps.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , Overfull \hbox (15.01662pt too wide) in paragraph at lines 9789--9791 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.bs.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3788] Overfull \hbox (5.8567pt too wide) in paragraph at lines 10150--10152 []\T1/zi4/m/it/10 determinant,BunchKaufman,logical-method [3789] Overfull \hbox (15.8567pt too wide) in paragraph at lines 10166--10168 []\T1/zi4/m/it/10 determinant,diagonalMatrix,logical-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 10188--10190 []\T1/zi4/m/it/10 determinant,MatrixFactorization,missing-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 10190--10192 []\T1/zi4/m/it/10 determinant,pBunchKaufman,logical-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10202--10204 []\T1/zi4/m/it/10 determinant,triangularMatrix,logical-method [3790] [3791] Overfull \hbox (20.8567pt too wide) in paragraph at lines 10580--10582 []\T1/zi4/m/it/10 dimnames<-,MatrixFactorization,list-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 10582--10584 []\T1/zi4/m/it/10 dimnames<-,MatrixFactorization,NULL-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 10584--10586 []\T1/zi4/m/it/10 dimnames<-,symmetricMatrix,list-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 10586--10588 []\T1/zi4/m/it/10 dimnames<-,symmetricMatrix,NULL-method [3792] Overfull \hbox (15.01662pt too wide) in paragraph at lines 10935--10937 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Transcript written on fullrefman.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-FAQ.texi @setfilename R-FAQ.info This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ .texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) [1{/var/lib/texmf/fonts /map/pdftex/updmap/pdftex.map}] [-1] Chapter 1 Chapter 2 [1] Cross reference values unknown; you must run TeX again. [2] Underfull \hbox (badness 10000) in paragraph at lines 294--323 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 658--663 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Underfull \hbox (badness 10000) in paragraph at lines 1531--1534 []@textrm See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_progra mming_language# Underfull \hbox (badness 10000) in paragraph at lines 1531--1534 @texttt Commercialized_versions_of_R[][] @textrm for point-ers to com-mer-cial- ized ver-sions of Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1819--1819 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3135--3149 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] Chapter 10 [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (49 pages, 351491 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ .texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) [1{/var/lib/texmf/fonts /map/pdftex/updmap/pdftex.map}] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-FAQ.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-FAQ.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-FAQ.toc) Chapter 1 (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-FAQ.aux) Chapter 2 [1] [2] Underfull \hbox (badness 10000) in paragraph at lines 294--323 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 658--663 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Underfull \hbox (badness 10000) in paragraph at lines 1531--1534 []@textrm See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_progra mming_language# Underfull \hbox (badness 10000) in paragraph at lines 1531--1534 @texttt Commercialized_versions_of_R[][] @textrm for point-ers to com-mer-cial- ized ver-sions of Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1819--1819 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3135--3149 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] Chapter 10 [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (51 pages, 368656 bytes). Transcript written on R-FAQ.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-admin.texi @setfilename R-admin.info This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.t2d/pdf/xtr/R-a dmin.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) 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[3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16] [17] Chapter 4 [18] [19] [20] Chapter 5 [21] Chapter 6 [22] [23] [24] [25] Overfull \hbox (16.31242pt too wide) in paragraph at lines 2210--2210 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [26] [27] [28] [29] [30] Chapter 7 [31] [32] [33] Chapter 8 [34] Chapter 9 [35] [36] Appendix A [37] [38] [39] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3230--3230 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [40] [41] Underfull \hbox (badness 10000) in paragraph at lines 3444--3446 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [42] [43] [44] [45] [46] [47] [48] [49] [50] Appendix B [51] [52] [53] [54] [55] Appendix C [56] [57] [58] [59] [60] [61] Overfull \hbox (101.2292pt too wide) in paragraph at lines 5191--5191 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.42-da rwin.20-arm64.tar.xz[] Overfull \hbox (83.98314pt too wide) in paragraph at lines 5193--5193 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.4.2-darwi n.20-arm64.tar.xz[] [62] [63] Overfull \hbox (39.30717pt too wide) in paragraph at lines 5314--5314 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.1-darwin.20 -arm64.tar.gz[] Overfull \hbox (148.53224pt too wide) in paragraph at lines 5351--5351 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (17.16873pt too wide) in paragraph at lines 5360--5361 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [64] [65] [66] Overfull \hbox (51.1502pt too wide) in paragraph at lines 5632--5632 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [67] [68] [69] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5898--5898 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0/libgfortran.5. dylib \[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5903--5903 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0/libquadmath.0. dylib \[] [70] Overfull \hbox (50.80455pt too wide) in paragraph at lines 5944--5944 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [71] (Function and variable index) [72] No file R-admin.vrs. (Concept index) [73] No file R-admin.cps. (Environment variable index) [74] No file R-admin.ens. [75] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (78 pages, 466700 bytes). Transcript written on R-admin.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.t2d/pdf/xtr/R-a dmin.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.toc) Chapter 1 (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.aux) Writing index file R-admin.cp Writing index file R-admin.en [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16] [17] Chapter 4 [18] [19] [20] Chapter 5 [21] Chapter 6 [22] [23] [24] [25] Overfull \hbox (16.31242pt too wide) in paragraph at lines 2210--2210 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [26] [27] [28] [29] [30] Chapter 7 [31] [32] [33] Chapter 8 [34] Chapter 9 [35] [36] Appendix A [37] [38] [39] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3230--3230 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [40] [41] Underfull \hbox (badness 10000) in paragraph at lines 3444--3446 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [42] [43] [44] [45] [46] [47] [48] [49] [50] Appendix B [51] [52] [53] [54] [55] Appendix C [56] [57] [58] [59] [60] [61] Overfull \hbox (101.2292pt too wide) in paragraph at lines 5191--5191 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.42-da rwin.20-arm64.tar.xz[] Overfull \hbox (83.98314pt too wide) in paragraph at lines 5193--5193 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.4.2-darwi n.20-arm64.tar.xz[] [62] l.5240: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5240: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5240: Undefined cross reference ` Tcl/Tk headers and libraries-pg'. [63] Overfull \hbox (39.30717pt too wide) in paragraph at lines 5314--5314 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.1-darwin.20 -arm64.tar.gz[] Overfull \hbox (148.53224pt too wide) in paragraph at lines 5351--5351 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (17.16873pt too wide) in paragraph at lines 5360--5361 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [64] [65] [66] Overfull \hbox (51.1502pt too wide) in paragraph at lines 5632--5632 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [67] [68] [69] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5898--5898 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0/libgfortran.5. dylib \[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5903--5903 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0/libquadmath.0. dylib \[] [70] Overfull \hbox (50.80455pt too wide) in paragraph at lines 5944--5944 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [71] (Function and variable index) [72] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.vrs) (Concept index) [73] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.cps) (Environment variable index) [74] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-admin.ens) [75] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (80 pages, 510325 bytes). Transcript written on R-admin.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-data.texi @setfilename R-data.info This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.t2d/pdf/xtr/R-da ta.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-data.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 453--457 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] No file R-data.vrs. (Concept index) [29] No file R-data.cps. [30] ) (see the transcript file for additional information) Output written on R-data.pdf (33 pages, 263535 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.t2d/pdf/xtr/R-da ta.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.toc [-1]) [-2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.aux) Chapter 1 [1] Writing index file R-data.cp [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 453--457 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.vrs [29]) (Concept index) [30] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.cps) [31] ) (see the transcript file for additional information) Output written on R-data.pdf (35 pages, 299634 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.t2d/pdf/xtr/R-da ta.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.toc [-1]) [-2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.aux) Chapter 1 [1] Writing index file R-data.cp [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 453--457 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.vrs [29]) (Concept index) [30] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-data.cps) [31] ) (see the transcript file for additional information) Output written on R-data.pdf (35 pages, 299639 bytes). Transcript written on R-data.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-exts.texi @setfilename R-exts.info This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.t2d/pdf/xtr/R-ex ts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-exts.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 508--511 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] Underfull \hbox (badness 10000) in paragraph at lines 1318--1319 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1319--1320 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1324--1326 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars.ucrt[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1324--1326 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1332--1333 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1333--1334 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1338--1340 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars.ucrt[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1340 @texttt ~/.R/Makevars.win64[]@textrm , [15] [16] [17] [18] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1602--1602 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1603--1603 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [19] Underfull \hbox (badness 10000) in paragraph at lines 1702--1712 [][]@texttt https:// sourceforge. net/ projects/ tktable/ files/ tktable/ 2. 10/ Tktable2. 10. tar. gz/ [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2692--2692 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2694--2694 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [31] [32] [33] Underfull \hbox (badness 10000) in paragraph at lines 2963--2966 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [34] Underfull \hbox (badness 10000) in paragraph at lines 3045--3051 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [35] Overfull \hbox (39.30717pt too wide) in paragraph at lines 3132--3132 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [36] [37] Underfull \hbox (badness 10000) in paragraph at lines 3276--3280 @textrm ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manual/ c make-env-variables. 7. html# [38] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3377--3377 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] Overfull \hbox (59.67485pt too wide) in paragraph at lines 5013--5013 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 5032--5032 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [57] [58] [59] [60] [61] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5499--5499 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5501--5501 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5502--5502 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] [62] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5517--5517 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] Underfull \hbox (badness 7558) in paragraph at lines 5575--5579 @texttt /Applications/CMake.app/Contents/bin/cmake[] @textrm and that should b e looked for [63] [64] [65] [66] [67] [68] Underfull \hbox (badness 10000) in paragraph at lines 6059--6062 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [69] [70] Overfull \hbox (32.24495pt too wide) in paragraph at lines 6283--6283 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [71] [72] Overfull \hbox (26.49626pt too wide) in paragraph at lines 6425--6425 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (72.48576pt too wide) in paragraph at lines 6452--6452 [] @texttt error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj), ( double) nelem);[] Underfull \hbox (badness 10000) in paragraph at lines 6485--6486 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [73] [74] [75] [76] [77] [78] [79] [80] Underfull \hbox (badness 10000) in paragraph at lines 7150--7160 []@textrm R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-pro ject. org[]@textrm )[]) and RForge Chapter 2 [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] Underfull \hbox (badness 10000) in paragraph at lines 8216--8223 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [94] [95] Underfull \hbox (badness 10000) in paragraph at lines 8396--8402 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text[] @textrm part of Underfull \hbox (badness 10000) in paragraph at lines 8428--8433 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [96] [97] [98] Chapter 3 [99] [100] [101] [102] [103] [104] Overfull \hbox (22.06111pt too wide) in paragraph at lines 9199--9199 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [105] Chapter 4 [106] [107] [108] [109] [110] Underfull \hbox (badness 10000) in paragraph at lines 9646--9655 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [111] [112] [113] Underfull \hbox (badness 10000) in paragraph at lines 9916--9928 @textrm See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual. htm l# controlling-code-generation[][]@textrm , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9932--9933 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [114] Overfull \hbox (56.55324pt too wide) in paragraph at lines 10071--10071 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] [115] Underfull \hbox (badness 10000) in paragraph at lines 10104--10107 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by Underfull \hbox (badness 10000) in paragraph at lines 10104--10107 @texttt -fsanitize=undefined,address[] @textrm (where both are sup-ported, and we have seen [116] Overfull \hbox (91.04536pt too wide) in paragraph at lines 10219--10219 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (148.53224pt too wide) in paragraph at lines 10220--10220 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (160.02962pt too wide) in paragraph at lines 10223--10223 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (16.31242pt too wide) in paragraph at lines 10231--10231 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] [117] Overfull \hbox (50.80455pt too wide) in paragraph at lines 10286--10286 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] [118] [119] [120] [121] Underfull \hbox (badness 10000) in paragraph at lines 10656--10658 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [122] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10723--10723 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10742--10742 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10753--10753 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] [123] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10783--10783 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [124] [125] [126] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (30.03963pt too wide) in paragraph at lines 11663--11663 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [134] [135] Overfull \hbox (39.30717pt too wide) in paragraph at lines 11827--11827 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [136] [137] [138] [139] [140] Overfull \hbox (16.31242pt too wide) in paragraph at lines 12264--12264 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] Underfull \hbox (badness 10000) in paragraph at lines 13285--13289 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] Overfull \hbox (22.06111pt too wide) in paragraph at lines 14385--14385 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [164] Overfull \hbox (50.80455pt too wide) in paragraph at lines 14480--14480 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [165] Chapter 6 [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] Warning: unbalanced parentheses in @def... [184] [185] [186] [187] [188] [189] Underfull \hbox (badness 10000) in paragraph at lines 16619--16625 []@textrm The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/Graphic sEngine.h[]@textrm , @texttt R_ Chapter 7 [190] [191] Chapter 8 [192] [193] [194] Overfull \hbox (22.06111pt too wide) in paragraph at lines 17040--17040 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [195] Overfull \hbox (33.55849pt too wide) in paragraph at lines 17098--17098 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [196] [197] [198] [199] [200] [201] Underfull \hbox (badness 10000) in paragraph at lines 17618--17625 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and [202] [203] (Function and variable index) [204] No file R-exts.vrs. (Concept index) [205] No file R-exts.cps. [206] ) (see the transcript file for additional information) Output written on R-exts.pdf (209 pages, 982099 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.t2d/pdf/xtr/R-ex ts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.aux) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 508--511 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] Underfull \hbox (badness 10000) in paragraph at lines 1318--1319 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1319--1320 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1324--1326 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars.ucrt[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1324--1326 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1332--1333 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1333--1334 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1338--1340 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars.ucrt[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1340 @texttt ~/.R/Makevars.win64[]@textrm , [15] [16] [17] [18] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1602--1602 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1603--1603 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [19] Underfull \hbox (badness 10000) in paragraph at lines 1702--1712 [][]@texttt https:// sourceforge. net/ projects/ tktable/ files/ tktable/ 2. 10/ Tktable2. 10. tar. gz/ [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2692--2692 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2694--2694 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [31] [32] [33] Underfull \hbox (badness 10000) in paragraph at lines 2963--2966 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [34] Underfull \hbox (badness 10000) in paragraph at lines 3045--3051 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [35] Overfull \hbox (39.30717pt too wide) in paragraph at lines 3132--3132 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [36] [37] Underfull \hbox (badness 10000) in paragraph at lines 3276--3280 @textrm ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manual/ c make-env-variables. 7. html# [38] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3377--3377 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] Overfull \hbox (59.67485pt too wide) in paragraph at lines 5013--5013 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 5032--5032 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [57] [58] [59] [60] [61] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5499--5499 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5501--5501 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5502--5502 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5517--5517 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [62] Underfull \hbox (badness 7558) in paragraph at lines 5575--5579 @texttt /Applications/CMake.app/Contents/bin/cmake[] @textrm and that should b e looked for [63] [64] [65] [66] [67] [68] Underfull \hbox (badness 10000) in paragraph at lines 6059--6062 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [69] [70] Overfull \hbox (32.24495pt too wide) in paragraph at lines 6283--6283 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [71] [72] Overfull \hbox (26.49626pt too wide) in paragraph at lines 6425--6425 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (72.48576pt too wide) in paragraph at lines 6452--6452 [] @texttt error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj), ( double) nelem);[] Underfull \hbox (badness 10000) in paragraph at lines 6485--6486 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [73] [74] [75] [76] [77] [78] [79] [80] Underfull \hbox (badness 10000) in paragraph at lines 7150--7160 []@textrm R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-pro ject. org[]@textrm )[]) and RForge Chapter 2 [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] Underfull \hbox (badness 10000) in paragraph at lines 8216--8223 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [94] [95] Underfull \hbox (badness 10000) in paragraph at lines 8396--8402 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text[] @textrm part of Underfull \hbox (badness 10000) in paragraph at lines 8428--8433 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [96] [97] [98] Chapter 3 [99] [100] [101] [102] [103] [104] Overfull \hbox (22.06111pt too wide) in paragraph at lines 9199--9199 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [105] Chapter 4 [106] [107] [108] [109] [110] Underfull \hbox (badness 10000) in paragraph at lines 9646--9655 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [111] [112] [113] Underfull \hbox (badness 10000) in paragraph at lines 9916--9928 @textrm See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual. htm l# controlling-code-generation[][]@textrm , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9932--9933 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [114] Overfull \hbox (56.55324pt too wide) in paragraph at lines 10071--10071 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] [115] Underfull \hbox (badness 10000) in paragraph at lines 10104--10107 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by Underfull \hbox (badness 10000) in paragraph at lines 10104--10107 @texttt -fsanitize=undefined,address[] @textrm (where both are sup-ported, and we have seen [116] Overfull \hbox (91.04536pt too wide) in paragraph at lines 10219--10219 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (148.53224pt too wide) in paragraph at lines 10220--10220 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (160.02962pt too wide) in paragraph at lines 10223--10223 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (16.31242pt too wide) in paragraph at lines 10231--10231 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] [117] Overfull \hbox (50.80455pt too wide) in paragraph at lines 10286--10286 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] [118] [119] [120] [121] Underfull \hbox (badness 10000) in paragraph at lines 10656--10658 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [122] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10723--10723 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10742--10742 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10753--10753 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] [123] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10783--10783 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [124] [125] [126] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (30.03963pt too wide) in paragraph at lines 11663--11663 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [134] [135] Overfull \hbox (39.30717pt too wide) in paragraph at lines 11827--11827 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [136] [137] [138] [139] [140] Overfull \hbox (16.31242pt too wide) in paragraph at lines 12264--12264 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] Underfull \hbox (badness 10000) in paragraph at lines 13285--13289 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] Overfull \hbox (22.06111pt too wide) in paragraph at lines 14385--14385 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [164] Overfull \hbox (50.80455pt too wide) in paragraph at lines 14480--14480 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [165] Chapter 6 [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] Warning: unbalanced parentheses in @def... [184] [185] [186] [187] [188] [189] Underfull \hbox (badness 10000) in paragraph at lines 16619--16625 []@textrm The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/Graphic sEngine.h[]@textrm , @texttt R_ Chapter 7 [190] [191] Chapter 8 [192] [193] [194] Overfull \hbox (22.06111pt too wide) in paragraph at lines 17040--17040 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [195] Overfull \hbox (33.55849pt too wide) in paragraph at lines 17098--17098 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [196] [197] [198] [199] [200] [201] Underfull \hbox (badness 10000) in paragraph at lines 17618--17625 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and [202] [203] (Function and variable index) [204] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.vrs [205] [206] [207] [208]) (Concept index) [209] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.cps [210]) [211] ) (see the transcript file for additional information) Output written on R-exts.pdf (218 pages, 1048322 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.t2d/pdf/xtr/R-ex ts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.aux) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 508--511 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] Underfull \hbox (badness 10000) in paragraph at lines 1318--1319 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1319--1320 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1324--1326 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars.ucrt[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1324--1326 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1332--1333 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1333--1334 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1338--1340 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars.ucrt[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1340 @texttt ~/.R/Makevars.win64[]@textrm , [15] [16] [17] [18] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1602--1602 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1603--1603 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [19] Underfull \hbox (badness 10000) in paragraph at lines 1702--1712 [][]@texttt https:// sourceforge. net/ projects/ tktable/ files/ tktable/ 2. 10/ Tktable2. 10. tar. gz/ [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2692--2692 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2694--2694 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [31] [32] [33] Underfull \hbox (badness 10000) in paragraph at lines 2963--2966 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [34] Underfull \hbox (badness 10000) in paragraph at lines 3045--3051 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [35] Overfull \hbox (39.30717pt too wide) in paragraph at lines 3132--3132 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [36] [37] Underfull \hbox (badness 10000) in paragraph at lines 3276--3280 @textrm ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manual/ c make-env-variables. 7. html# [38] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3377--3377 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] Overfull \hbox (59.67485pt too wide) in paragraph at lines 5013--5013 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 5032--5032 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [57] [58] [59] [60] [61] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5499--5499 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5501--5501 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5502--5502 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5517--5517 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [62] Underfull \hbox (badness 7558) in paragraph at lines 5575--5579 @texttt /Applications/CMake.app/Contents/bin/cmake[] @textrm and that should b e looked for [63] [64] [65] [66] [67] [68] Underfull \hbox (badness 10000) in paragraph at lines 6059--6062 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [69] [70] Overfull \hbox (32.24495pt too wide) in paragraph at lines 6283--6283 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [71] [72] Overfull \hbox (26.49626pt too wide) in paragraph at lines 6425--6425 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (72.48576pt too wide) in paragraph at lines 6452--6452 [] @texttt error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj), ( double) nelem);[] Underfull \hbox (badness 10000) in paragraph at lines 6485--6486 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [73] [74] [75] [76] [77] [78] [79] [80] Underfull \hbox (badness 10000) in paragraph at lines 7150--7160 []@textrm R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-pro ject. org[]@textrm )[]) and RForge Chapter 2 [81] [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] Underfull \hbox (badness 10000) in paragraph at lines 8216--8223 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [94] [95] Underfull \hbox (badness 10000) in paragraph at lines 8396--8402 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text[] @textrm part of Underfull \hbox (badness 10000) in paragraph at lines 8428--8433 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [96] [97] [98] Chapter 3 [99] [100] [101] [102] [103] [104] Overfull \hbox (22.06111pt too wide) in paragraph at lines 9199--9199 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [105] Chapter 4 [106] [107] [108] [109] [110] Underfull \hbox (badness 10000) in paragraph at lines 9646--9655 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [111] [112] [113] Underfull \hbox (badness 10000) in paragraph at lines 9916--9928 @textrm See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual. htm l# controlling-code-generation[][]@textrm , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9932--9933 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [114] Overfull \hbox (56.55324pt too wide) in paragraph at lines 10071--10071 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] [115] Underfull \hbox (badness 10000) in paragraph at lines 10104--10107 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by Underfull \hbox (badness 10000) in paragraph at lines 10104--10107 @texttt -fsanitize=undefined,address[] @textrm (where both are sup-ported, and we have seen [116] Overfull \hbox (91.04536pt too wide) in paragraph at lines 10219--10219 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (148.53224pt too wide) in paragraph at lines 10220--10220 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (160.02962pt too wide) in paragraph at lines 10223--10223 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (16.31242pt too wide) in paragraph at lines 10231--10231 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] [117] Overfull \hbox (50.80455pt too wide) in paragraph at lines 10286--10286 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] [118] [119] [120] [121] Underfull \hbox (badness 10000) in paragraph at lines 10656--10658 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [122] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10723--10723 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10742--10742 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10753--10753 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] [123] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10783--10783 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] Chapter 5 [124] [125] [126] [127] [128] [129] [130] [131] [132] [133] Overfull \hbox (30.03963pt too wide) in paragraph at lines 11663--11663 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [134] [135] Overfull \hbox (39.30717pt too wide) in paragraph at lines 11827--11827 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [136] [137] [138] [139] [140] Overfull \hbox (16.31242pt too wide) in paragraph at lines 12264--12264 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] Underfull \hbox (badness 10000) in paragraph at lines 13285--13289 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] Overfull \hbox (22.06111pt too wide) in paragraph at lines 14385--14385 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [164] Overfull \hbox (50.80455pt too wide) in paragraph at lines 14480--14480 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [165] Chapter 6 [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] Warning: unbalanced parentheses in @def... [184] [185] [186] [187] [188] [189] Underfull \hbox (badness 10000) in paragraph at lines 16619--16625 []@textrm The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/Graphic sEngine.h[]@textrm , @texttt R_ Chapter 7 [190] [191] Chapter 8 [192] [193] [194] Overfull \hbox (22.06111pt too wide) in paragraph at lines 17040--17040 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [195] Overfull \hbox (33.55849pt too wide) in paragraph at lines 17098--17098 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [196] [197] [198] [199] [200] [201] Underfull \hbox (badness 10000) in paragraph at lines 17618--17625 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and [202] [203] (Function and variable index) [204] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.vrs [205] [206] [207] [208]) (Concept index) [209] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-exts.cps [210]) [211] ) (see the transcript file for additional information) Output written on R-exts.pdf (218 pages, 1048394 bytes). Transcript written on R-exts.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-intro.texi @setfilename R-intro.info This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.t2d/pdf/xtr/R-i ntro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface) Cross reference values unknown; you must run TeX again. Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] Chapter 9 [38] [39] Chapter 10 [40] [41] [42] [43] [44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] Chapter 12 [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] Chapter 13 [74] [75] Chapter 14 [76] [77] Underfull \hbox (badness 10000) in paragraph at lines 6653--6658 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and Underfull \hbox (badness 7064) in paragraph at lines 6653--6658 @texttt \\?\UNC\server\dir1\dir2\file[]@textrm ) are not sup-ported, but they may work in [78] Appendix A [79] [80] [81] Appendix B [82] [83] [84] [85] [86] [87] [88] Appendix C [89] [90] Appendix D [91] No file R-intro.vrs. Appendix E [92] No file R-intro.cps. Appendix F [93] [94] ) (see the transcript file for additional information) Output written on R-intro.pdf (97 pages, 566887 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.t2d/pdf/xtr/R-i ntro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.toc) (Preface) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] Chapter 9 [38] [39] Chapter 10 [40] [41] [42] [43] [44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] Chapter 12 [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] Chapter 13 [74] [75] Chapter 14 [76] [77] Underfull \hbox (badness 10000) in paragraph at lines 6653--6658 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and Underfull \hbox (badness 7064) in paragraph at lines 6653--6658 @texttt \\?\UNC\server\dir1\dir2\file[]@textrm ) are not sup-ported, but they may work in [78] Appendix A [79] [80] [81] Appendix B [82] [83] [84] [85] [86] [87] [88] Appendix C [89] [90] Appendix D [91] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.vrs [92] [93]) Appendix E [94] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.cps [95]) Appendix F [96] [97] ) (see the transcript file for additional information) Output written on R-intro.pdf (103 pages, 618944 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.t2d/pdf/xtr/R-i ntro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.toc) (Preface) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] Chapter 9 [38] [39] Chapter 10 [40] [41] [42] [43] [44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] Chapter 12 [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] Chapter 13 [74] [75] Chapter 14 [76] [77] Underfull \hbox (badness 10000) in paragraph at lines 6653--6658 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and Underfull \hbox (badness 7064) in paragraph at lines 6653--6658 @texttt \\?\UNC\server\dir1\dir2\file[]@textrm ) are not sup-ported, but they may work in [78] Appendix A [79] [80] [81] Appendix B [82] [83] [84] [85] [86] [87] [88] Appendix C [89] [90] Appendix D [91] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.vrs [92] [93]) Appendix E [94] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-intro.cps [95]) Appendix F [96] [97] ) (see the transcript file for additional information) Output written on R-intro.pdf (103 pages, 618953 bytes). Transcript written on R-intro.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-ints.texi @setfilename R-ints.info This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.t2d/pdf/xtr/R-in ts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1498--1498 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1499--1499 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1500--1500 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1501--1501 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] Underfull \hbox (badness 10000) in paragraph at lines 3791--3800 @textrm ing been built and in-stalled as a Mac macOS `frame-work'. Specif-i-cal ly, Underfull \hbox (badness 10000) in paragraph at lines 3791--3800 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, as Underfull \hbox (badness 10000) in paragraph at lines 3791--3800 @textrm frame-works can con-tain mul-ti-ple ver-sions of R. It even-tu-ally re- solves to [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3978--3982 []@textrm If true, make use of the [][]@textbf codetools @textrm (@texttt http s:// CRAN. R-project. org/ [47] Underfull \hbox (badness 10000) in paragraph at lines 4012--4017 @textrm the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor-rect c hoice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] No file R-ints.vrs. (Concept index) [66] No file R-ints.cps. [67] ) (see the transcript file for additional information) Output written on R-ints.pdf (70 pages, 416725 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.t2d/pdf/xtr/R-in ts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.toc [-1]) [-2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.toc) Chapter 1 (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1498--1498 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1499--1499 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1500--1500 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1501--1501 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] Underfull \hbox (badness 10000) in paragraph at lines 3791--3800 @textrm ing been built and in-stalled as a Mac macOS `frame-work'. Specif-i-cal ly, Underfull \hbox (badness 10000) in paragraph at lines 3791--3800 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, as Underfull \hbox (badness 10000) in paragraph at lines 3791--3800 @textrm frame-works can con-tain mul-ti-ple ver-sions of R. It even-tu-ally re- solves to [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3978--3982 []@textrm If true, make use of the [][]@textbf codetools @textrm (@texttt http s:// CRAN. R-project. org/ [47] Underfull \hbox (badness 10000) in paragraph at lines 4012--4017 @textrm the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor-rect c hoice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.vrs [66]) (Concept index) [67] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.cps) [68] ) (see the transcript file for additional information) Output written on R-ints.pdf (72 pages, 464381 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.t2d/pdf/xtr/R-in ts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.toc [-1]) [-2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.toc) Chapter 1 (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1498--1498 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1499--1499 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1500--1500 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1501--1501 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] Underfull \hbox (badness 10000) in paragraph at lines 3791--3800 @textrm ing been built and in-stalled as a Mac macOS `frame-work'. Specif-i-cal ly, Underfull \hbox (badness 10000) in paragraph at lines 3791--3800 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, as Underfull \hbox (badness 10000) in paragraph at lines 3791--3800 @textrm frame-works can con-tain mul-ti-ple ver-sions of R. It even-tu-ally re- solves to [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3978--3982 []@textrm If true, make use of the [][]@textbf codetools @textrm (@texttt http s:// CRAN. R-project. org/ [47] Underfull \hbox (badness 10000) in paragraph at lines 4012--4017 @textrm the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor-rect c hoice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.vrs [66]) (Concept index) [67] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-ints.cps) [68] ) (see the transcript file for additional information) Output written on R-ints.pdf (72 pages, 464385 bytes). Transcript written on R-ints.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-lang.texi @setfilename R-lang.info This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.t2d/pdf/xtr/R-la ng.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-lang.cp Chapter 2 [1] [2] Cross reference values unknown; you must run TeX again. Overfull \hbox (8.41086pt too wide) in paragraph at lines 306--307 @textbf storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] [30] Chapter 6 [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 4396--4398 []@textrm Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] No file R-lang.vrs. (Concept Index) [52] No file R-lang.cps. Appendix A [53] [54] ) (see the transcript file for additional information) Output written on R-lang.pdf (57 pages, 345152 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.t2d/pdf/xtr/R-la ng.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.toc) Chapter 1 (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 306--307 @textbf storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] [30] Chapter 6 [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 4396--4398 []@textrm Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.vrs [52]) (Concept Index) [53] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.cps) Appendix A [54] [55] ) (see the transcript file for additional information) Output written on R-lang.pdf (60 pages, 386969 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.t2d/pdf/xtr/R-la ng.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/version.texi) [1{/var/l ib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.toc) Chapter 1 (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 306--307 @textbf storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] [30] Chapter 6 [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 4396--4398 []@textrm Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.vrs [52]) (Concept Index) [53] (/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual/R-lang.cps) Appendix A [54] [55] ) (see the transcript file for additional information) Output written on R-lang.pdf (60 pages, 386948 bytes). Transcript written on R-lang.log. make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' + make compact-pdf make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' compacting PDF manuals in doc/manual compacted ‘R-FAQ.pdf’ from 360Kb to 302Kb compacted ‘R-data.pdf’ from 293Kb to 226Kb make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' + make info make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-FAQ.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-admin.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-data.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-exts.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-intro.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-ints.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-lang.texi make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-intro.info.utf8 doc/manual/R-intro.info + mv doc/manual/R-intro.info.utf8 doc/manual/R-intro.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-FAQ.info.utf8 doc/manual/R-FAQ.info + mv doc/manual/R-FAQ.info.utf8 doc/manual/R-FAQ.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/FAQ.utf8 doc/FAQ + mv doc/FAQ.utf8 doc/FAQ + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-admin.info.utf8 doc/manual/R-admin.info + mv doc/manual/R-admin.info.utf8 doc/manual/R-admin.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-exts.info-1.utf8 doc/manual/R-exts.info-1 + mv doc/manual/R-exts.info-1.utf8 doc/manual/R-exts.info-1 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.BrBDUC + umask 022 + cd /builddir/build/BUILD/R-4.4.2-build + '[' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/R-4.4.2-build/BUILDROOT ++ dirname /builddir/build/BUILD/R-4.4.2-build/BUILDROOT + mkdir -p /builddir/build/BUILD/R-4.4.2-build + mkdir /builddir/build/BUILD/R-4.4.2-build/BUILDROOT + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.4.2 + make DESTDIR=/builddir/build/BUILD/R-4.4.2-build/BUILDROOT install install-pdf install-info mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/m4' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/m4' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tools' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tools' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' installing doc ... mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/doc/R mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/man/man1 make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/html' installing doc/html ... mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/doc/R/html make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/html' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' installing doc/manual ... mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/doc/R/manual mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/doc/R/manual/images make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/etc' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/etc installing etc ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/etc' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/share' installing share ... mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/R mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/dictionaries mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/encodings mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/java mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/licenses mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/make mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/Rd mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/Rd/macros mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/sh mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/texmf mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/texmf/bibtex/bib mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/texmf/bibtex/bst mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/texmf/tex/latex make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/share' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/scripts' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/bin mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/scripts' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/include/R make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include/R_ext' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/include/R/R_ext make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include/R_ext' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/blas' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/blas' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/tre' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/tre' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/tzone' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/tzone' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/xdr' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/xdr' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/intl' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra/intl' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/extra' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/appl' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/appl' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/nmath' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/unix' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -DR_HOME='"/usr/lib64/R"' \ -o Rscript ./Rscript.c mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/pkgconfig make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/unix' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/exec make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/lib make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/main' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/internet' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/modules make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/internet' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/lapack' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/lapack' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/X11' make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules/X11' make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/modules' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library installing packages ... building HTML index ... make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' installing R manuals in PDF format ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' mkdir -p -- /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/info /usr/bin/install -c -m 644 "./dir" "/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/info" installing R info pages ... updating '/usr/share/info/dir' ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/manual' + rm -f /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/info/dir + mkdir -p /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/doc/R + install -p CAPABILITIES /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/doc/R + cd src/nmath/standalone + make install DESTDIR=/builddir/build/BUILD/R-4.4.2-build/BUILDROOT make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include' make[1]: 'Rmath.h' is up to date. make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/src/include' + mkdir -p /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/etc/ld.so.conf.d + echo /usr/lib64/R/lib + mkdir -p /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/library + touch -r README /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/doc/R/CAPABILITIES + touch -r README doc/manual/R-FAQ.pdf doc/manual/R-admin.pdf doc/manual/R-data.pdf doc/manual/R-exts.pdf doc/manual/R-intro.pdf doc/manual/R-ints.pdf doc/manual/R-lang.pdf doc/manual/fullrefman.pdf + touch -r README /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/bin/R + sed -i 's|\..\/\..|/usr/lib64/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/doc/R/html/packages.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/KernSmooth/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/KernSmooth/html/bkde.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/KernSmooth/html/bkde2D.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/KernSmooth/html/bkfe.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/KernSmooth/html/dpih.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/KernSmooth/html/dpik.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/KernSmooth/html/dpill.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/KernSmooth/html/locpoly.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Aids2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Animals.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Boston.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Cars93.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Cushings.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/DDT.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/GAGurine.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Insurance.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/MASS-internal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Melanoma.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Null.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/OME.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Pima.tr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Rabbit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Rubber.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/SP500.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Sitka.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Sitka89.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Skye.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/Traffic.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/UScereal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/UScrime.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/VA.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/abbey.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/accdeaths.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/addterm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/anorexia.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/anova.negbin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/area.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/bacteria.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/bandwidth.nrd.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/bcv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/beav1.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/beav2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/biopsy.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/birthwt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/boxcox.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/cabbages.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/caith.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/cats.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/cement.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/chem.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/con2tr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/confint.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/contr.sdif.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/coop.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/corresp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/cov.rob.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/cov.trob.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/cpus.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/crabs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/deaths.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/denumerate.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/dose.p.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/drivers.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/dropterm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/eagles.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/epil.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/eqscplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/farms.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/fgl.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/fitdistr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/forbes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/fractions.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/galaxies.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/gamma.dispersion.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/gamma.shape.glm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/gehan.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/genotype.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/geyser.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/gilgais.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/ginv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/glm.convert.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/glm.nb.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/glmmPQL.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/hills.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/hist.scott.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/housing.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/huber.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/hubers.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/immer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/isoMDS.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/kde2d.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/lda.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/ldahist.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/leuk.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/lm.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/lm.ridge.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/loglm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/loglm1.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/logtrans.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/lqs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/mammals.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/mca.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/mcycle.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/menarche.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/michelson.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/minn38.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/motors.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/muscle.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/mvrnorm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/negative.binomial.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/newcomb.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/nlschools.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/npk.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/npr1.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/oats.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/painters.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/pairs.lda.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/parcoord.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/petrol.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/phones.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/plot.lda.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/plot.mca.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/polr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/predict.glmmPQL.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/predict.lda.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/predict.lqs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/predict.mca.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/predict.qda.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/profile.glm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/qda.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/quine.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/rational.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/renumerate.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/rlm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/rms.curv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/rnegbin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/road.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/rotifer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/sammon.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/ships.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/shoes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/shrimp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/shuttle.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/snails.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/stdres.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/steam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/stepAIC.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/stormer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/studres.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/summary.loglm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/summary.negbin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/summary.rlm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/survey.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/synth.tr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/MASS/html/theta.md.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/coerce-methods-graph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/colSums-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/condest.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dpoMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/drop0.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dsCMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dsRMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dsparseMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dsyMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dtCMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dtRMatrix-class-sparse.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dtpMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/dtrMatrix-class-dense.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/expand-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/expm-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/isSymmetric-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/isTriangular-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/kronecker-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/ldenseMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/ldiMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/lgeMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/lsparseMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/lsyMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/ltrMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/lu-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/mat2triplet.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/matmult-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/nnzero-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/norm-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/nsparseMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/nsyMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/ntrMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/pMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/pack-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/packedMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/printSpMatrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/qr-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/rankMatrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/rcond-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/rep2abI.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/rleDiff-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/rsparsematrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/solve-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/spMatrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/sparse.model.matrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/sparseLU-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/sparseMatrix-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/sparseMatrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/sparseQR-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/sparseVector-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/Matrix/html/sparseVector.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/Sys.localeconv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/Sys.readlink.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/Sys.setFileTime.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/Sys.setenv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/Sys.sleep.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/Sys.time.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/Sys.which.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/Tailcall.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/all.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/allnames.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/any.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/aperm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/append.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/apply.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/args.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/array.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/array2DF.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/as.Date.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/as.POSIXlt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/as.data.frame.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/as.environment.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/as.function.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/asplit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/assign.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/assignOps.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/attach.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/attr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/attributes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/autoload.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/backsolve.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/balancePOSIXlt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/base-defunct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/base-deprecated.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/bindenv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/bitwise.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/body.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/bquote.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/browser.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/browserText.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/builtins.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/by.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/c.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/call.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/callCC.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/capabilities.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/cat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/cbind.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/char.expand.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/character.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/charmatch.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/chartr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/chkDots.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/chol.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/chol2inv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/chooseOpsMethod.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/col.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/colSums.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/colnames.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/commandArgs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/comment.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/complex.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/conditions.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/conflicts.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/connections.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/contributors.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/copyright.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/crossprod.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/cumsum.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/curlGetHeaders.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/cut.POSIXt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/cut.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/data.class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/data.frame.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/data.matrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dataframeHelpers.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/date.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dcf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/debug.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/declare.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/delayedAssign.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/deparse.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/deparseOpts.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/det.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/detach.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dev.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/diag.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/diff.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/difftime.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dim.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dimnames.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/do.call.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dontCheck.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dots.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/double.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dput.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/drop.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/droplevels.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dump.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/duplicated.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/dynload.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/eapply.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/eigen.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/encodeString.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/environment.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/eval.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/exists.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/expand.grid.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/expression.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/extSoftVersion.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/factor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/file.access.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/file.choose.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/file.info.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/file.path.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/file.show.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/files.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/files2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/find.package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/nargs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/nchar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/nlevels.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/noquote.html + for i in 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sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/ns-dblcolon.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/ns-hooks.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/ns-internal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/ns-load.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/ns-reflect.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/ns-topenv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/numeric.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/numeric_version.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/octmode.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/on.exit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/options.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/order.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/outer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/parse.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/paste.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/path.expand.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/pcre_config.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/pipeOp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/plot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/pmatch.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/polyroot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/pos.to.env.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/pretty.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/print.dataframe.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/print.default.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/print.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/prmatrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/proc.time.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/prod.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/proportions.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/pushBack.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/qr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/qraux.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/quit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/range.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/rank.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/rapply.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/raw.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/rawConnection.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/rawConversion.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/readBin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/readChar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/readLines.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/readRDS.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/readRenviron.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/readline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/reg.finalizer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/regex.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/regmatches.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/rep.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/replace.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/rev.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/rle.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/rm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/round.POSIXt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/row.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/row.names.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/rowsum.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sQuote.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sample.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/save.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/scale.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/scan.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/search.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/seek.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/seq.Date.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/seq.POSIXt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/seq.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sequence.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/serialize.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/setTimeLimit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sets.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/shQuote.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/showConnections.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sign.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sink.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/slice.index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/slotOp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/socketSelect.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/solve.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sort.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sort_by.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/source.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/split.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sprintf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/srcfile.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/standardGeneric.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/startsWith.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/stop.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/stopifnot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/strptime.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/strrep.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/strsplit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/strtoi.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/strtrim.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/structure.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/strwrap.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/subset.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/substitute.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/substr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sum.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/summary.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/svd.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sweep.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/switch.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sys.parent.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/sys.source.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/system.file.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/system.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/system.time.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/system2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/t.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/table.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/tabulate.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/tapply.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/taskCallback.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/taskCallbackManager.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/taskCallbackNames.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/tempfile.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/textconnections.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/tilde.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/timezones.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/toString.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/trace.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/traceback.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/tracemem.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/transform.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/trimws.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/try.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/typeof.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/unique.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/units.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/unlink.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/unlist.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/unname.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/use.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/userhooks.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/utf8Conversion.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/validUTF8.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/vector.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/warning.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/warnings.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/weekday.POSIXt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/which.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/which.min.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/with.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/withVisible.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/write.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/writeLines.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/xtfrm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/zMachine.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/zScript.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/zapsmall.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/zpackages.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/base/html/zutils.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/EEF.profile.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/Imp.Estimates.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/abc.ci.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/acme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/aids.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/aircondit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/amis.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/aml.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/beaver.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/bigcity.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/boot-practicals.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/boot.array.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/boot.ci.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/boot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/brambles.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/breslow.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/calcium.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/cane.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/capability.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/catsM.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/cav.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/cd4.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/cd4.nested.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/censboot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/channing.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/claridge.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/cloth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/co.transfer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/coal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/control.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/corr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/cum3.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/cv.glm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/darwin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/dogs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/downs.bc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/ducks.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/empinf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/envelope.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/exp.tilt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/fir.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/freq.array.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/frets.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/glm.diag.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/glm.diag.plots.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/gravity.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/hirose.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/imp.weights.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/inv.logit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/islay.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/jack.after.boot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/k3.linear.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/linear.approx.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/lines.saddle.distn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/logit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/manaus.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/melanoma.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/motor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/neuro.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/nitrofen.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/nodal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/norm.ci.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/nuclear.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/paulsen.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/plot.boot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/poisons.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/polar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/print.boot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/print.bootci.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/print.saddle.distn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/print.simplex.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/remission.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/saddle.distn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/saddle.distn.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/saddle.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/salinity.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/simplex.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/simplex.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/smooth.f.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/sunspot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/survival.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/tau.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/tilt.boot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/tsboot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/tuna.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/urine.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/var.linear.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/boot/html/wool.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/SOM.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/batchSOM.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/condense.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/knn.cv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/knn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/knn1.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/lvq1.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/lvq2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/lvq3.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/lvqinit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/lvqtest.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/multiedit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/olvq1.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/reduce.nn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/class/html/somgrid.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/agnes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/agnes.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/agriculture.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/animals.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/bannerplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/chorSub.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/clara.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/clara.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/clusGap.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/clusplot.default.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/clusplot.partition.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/cluster-internal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/coef.hclust.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/daisy.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/diana.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/dissimilarity.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/ellipsoidhull.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/fanny.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/fanny.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/flower.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/lower.to.upper.tri.inds.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/medoids.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/mona.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/mona.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/pam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/pam.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/partition.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/plantTraits.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/plot.agnes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/plot.diana.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/plot.mona.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/plot.partition.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/pltree.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/pluton.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/predict.ellipsoid.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/print.agnes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/print.clara.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/print.diana.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/print.dissimilarity.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/print.fanny.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/print.mona.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/print.pam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/ruspini.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/silhouette.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/sizeDiss.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/summary.agnes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/summary.clara.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/summary.diana.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/summary.mona.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/summary.pam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/twins.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/volume.ellipsoid.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/votes.repub.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/cluster/html/xclara.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/codetools/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/codetools/html/checkUsage.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/codetools/html/codetools.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/codetools/html/findGlobals.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/codetools/html/showTree.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/compiler/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/compiler/html/compile.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/AirPassengers.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/BJsales.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/BOD.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/ChickWeight.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/DNase.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/EuStockMarkets.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Formaldehyde.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/HairEyeColor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Harman23.cor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Harman74.cor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Indometh.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/InsectSprays.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/JohnsonJohnson.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/LakeHuron.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/LifeCycleSavings.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Loblolly.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Nile.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Orange.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/OrchardSprays.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/PlantGrowth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Puromycin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Theoph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/Titanic.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/ToothGrowth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/UCBAdmissions.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/UKDriverDeaths.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/UKLungDeaths.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/UKgas.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/USAccDeaths.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/USArrests.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/USJudgeRatings.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/USPersonalExpenditure.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/VADeaths.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/WWWusage.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/WorldPhones.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/ability.cov.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/airmiles.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/airquality.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/anscombe.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/attenu.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/attitude.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/austres.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/beavers.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/cars.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/chickwts.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/co2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/crimtab.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/datasets-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/discoveries.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/esoph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/euro.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/eurodist.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/faithful.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/freeny.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/infert.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/iris.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/islands.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/lh.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/longley.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/lynx.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/morley.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/mtcars.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/nhtemp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/nottem.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/npk.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/occupationalStatus.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/precip.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/presidents.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/pressure.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/quakes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/randu.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/rivers.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/rock.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/sleep.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/stackloss.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/state.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/sunspot.month.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/sunspot.year.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/sunspots.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/swiss.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/treering.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/trees.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/uspop.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/volcano.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/warpbreaks.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/women.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/datasets/html/zCO2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/lookup.xport.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.S.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.arff.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.dbf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.dta.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.epiinfo.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.mtp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.octave.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.spss.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.ssd.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.systat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/read.xport.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/write.arff.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/write.dbf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/write.dta.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/foreign/html/write.foreign.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/Devices.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/Hershey.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/Japanese.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/Type1Font.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/adjustcolor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/as.graphicsAnnot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/as.raster.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/axisTicks.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/boxplot.stats.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/bringToTop.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/cairo.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/cairoSymbolFont.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/check.options.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/chull.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/cm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/col2rgb.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/colorRamp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/colors.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/contourLines.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/convertColor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/densCols.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/dev.capabilities.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/dev.capture.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/dev.flush.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/dev.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/dev.interactive.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/dev.size.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/dev2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/dev2bitmap.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/devAskNewPage.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/embedFonts.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/extendrange.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/getGraphicsEvent.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/glyphInfo.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/grDevices-internal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/grDevices-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/grSoftVersion.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/gray.colors.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/gray.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/hcl.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/hsv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/make.rgb.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/msgWindow.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/n2mfrow.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/nclass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/palette.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/palettes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/pdf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/pdf.options.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/pictex.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/plotmath.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/png.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/postscript.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/postscriptFonts.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/pretty.Date.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/ps.options.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/quartz.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/quartzFonts.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/recordGraphics.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/recordplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/rgb.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/rgb2hsv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/savePlot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/trans3d.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/windows.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/windows.options.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/windowsFonts.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/x11.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/x11Fonts.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/xfig.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/xy.coords.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/xyTable.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grDevices/html/xyz.coords.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/abline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/arrows.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/assocplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/axTicks.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/axis.POSIXct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/axis.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/barplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/box.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/boxplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/boxplot.matrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/bxp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/cdplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/clip.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/contour.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/convertXY.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/coplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/curve.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/dotchart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/filled.contour.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/fourfoldplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/frame.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/graphics-defunct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/graphics-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/grid.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/hist.POSIXt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/hist.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/identify.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/image.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/layout.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/legend.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/lines.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/locator.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/matplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/mosaicplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/mtext.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/pairs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/panel.smooth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/par.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/persp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/pie.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plot.dataframe.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plot.default.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plot.design.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plot.factor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plot.formula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plot.raster.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plot.table.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plot.window.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plot.xy.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/plothistogram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/points.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/polygon.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/polypath.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/rasterImage.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/rect.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/rug.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/units.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/xspline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/graphics/html/zAxis.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/Grid.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/absolute.size.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/arrow.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/as.mask.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/calcStringMetric.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/current.viewport.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/dataViewport.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/depth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/deviceLoc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/drawDetails.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/editDetails.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/editViewport.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/explode.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/gEdit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/gPath.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/getNames.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/gpar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid-defunct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid-internal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.DLapply.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.add.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.bezier.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.cap.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.circle.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.clip.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.convert.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.copy.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.curve.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.delay.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.display.list.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.draw.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.edit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.force.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.frame.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.function.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.get.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.glyph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.grab.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.grep.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.grill.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.grob.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.group.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.layout.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.place.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.plot.and.legend.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.points.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.polygon.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.stroke.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.text.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.xaxis.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.xspline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grid.yaxis.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/gridCoords.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grobCoords.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grobName.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grobWidth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/grobX.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/legendGrob.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/makeContent.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/patterns.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/plotViewport.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/resolveRasterSize.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/showGrob.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/showViewport.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/stringWidth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/unit.c.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/unit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/unit.length.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/unit.pmin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/unit.rep.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/unitType.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/valid.just.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/validDetails.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/viewport.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/viewportTransform.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/viewports.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/vpPath.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/widthDetails.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/xDetails.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/grid/html/xsplinePoints.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/Lattice.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/Rows.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/USMortality.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/axis.default.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/banking.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/barchart.table.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/barley.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/cloud.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/draw.colorkey.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/draw.key.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/environmental.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/ethanol.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/histogram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/interaction.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/lattice.options.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/latticeParseFormula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/level.colors.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/levelplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/llines.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/lset.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/make.groups.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/melanoma.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/oneway.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/packet.panel.default.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.axis.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.barchart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.bwplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.cloud.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.densityplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.dotplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.functions.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.histogram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.levelplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.loess.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.number.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.pairs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.parallel.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.qqmath.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.qqmathline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.smoothScatter.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.spline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.stripplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.superpose.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.violin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/panel.xyplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/prepanel.default.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/prepanel.functions.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/print.trellis.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/qq.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/qqmath.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/rfs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/shingles.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/simpleKey.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/simpleTheme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/singer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/splom.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/standard.theme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/strip.default.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/tmd.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/trellis.device.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/trellis.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/lattice/html/trellis.par.get.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/dotsMethods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/evalSource.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/findClass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/findMethods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/fixPrevious.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/genericFunction-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/getClass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/getMethod.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/getPackageName.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/hasArg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/implicitGeneric.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/inheritedSlotNames.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/initialize-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/is.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/isSealedMethod.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/languageEl.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/localRefClass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/method.skeleton.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/methodUtilities.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/methods-defunct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/methods-deprecated.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/methods-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/new.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/nonStructure-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/promptClass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/promptMethods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/refClass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/removeMethod.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/representation.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/selectSuperClasses.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setAs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setClass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setClassUnion.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setGeneric.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setGroupGeneric.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setIs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setLoadActions.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setMethod.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setOldClass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/setSClass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/show.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/showMethods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/signature-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/slot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/stdRefClass.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/substituteDirect.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/testInheritedMethods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/validObject.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/methods/html/zBasicFunsList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/Beta.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/FFdes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/NCV.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/Predict.matrix.cr.smooth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/Predict.matrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/Predict.matrix.soap.film.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/Rrank.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/Sl.initial.repara.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/Sl.repara.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/Sl.setup.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/Tweedie.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/XWXd.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/anova.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/bam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/bam.update.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/bandchol.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/blas.thread.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/bug.reports.mgcv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/cSplineDes.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/chol.down.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/choose.k.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/cnorm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/columb.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/concurvity.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/coxpht.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/dDeta.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/dpnorm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/exclude.too.far.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/extract.lme.cov.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/factor.smooth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/family.mgcv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/fix.family.link.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/fixDependence.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/formXtViX.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/formula.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/fs.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/full.score.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.check.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.control.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.convergence.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.fit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.fit3.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.fit5.post.proc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.mh.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.models.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.outer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.reparam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.scale.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.selection.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.side.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam.vcomp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gam2objective.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gamObject.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gamSim.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gamlss.etamu.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gamlss.gH.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gamm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gammals.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gaulss.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/get.var.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gevlss.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gfam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/ginla.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/gumbls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/identifiability.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/in.out.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/inSide.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/influence.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/initial.sp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/interpret.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/jagam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/k.check.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/ldTweedie.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/ldetS.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/linear.functional.terms.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/logLik.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/ls.size.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/magic.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/magic.post.proc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/mgcv-FAQ.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/mgcv-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/mgcv-parallel.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/mini.roots.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/missing.data.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/model.matrix.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/mono.con.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/mroot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/multinom.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/mvn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/negbin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/new.name.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/notExp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/notExp2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/null.space.dimension.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/ocat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/one.se.rule.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/pcls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/pdIdnot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/pdTens.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/pen.edf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/place.knots.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/plot.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/polys.plot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/predict.bam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/predict.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/print.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/psum.chisq.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/qq.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/rTweedie.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/random.effects.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/residuals.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/rig.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/rmvn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/s.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/scat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/sdiag.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/shash.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/single.index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/slanczos.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.ad.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.bs.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.cr.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.ds.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.fs.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.gp.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.mrf.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.ps.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.re.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.so.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.sos.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.sz.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.t2.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.tensor.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.construct.tp.smooth.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.info.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth.terms.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smooth2random.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/smoothCon.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/sp.vcov.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/spasm.construct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/step.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/summary.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/t2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/te.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/tensor.prod.model.matrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/totalPenaltySpace.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/trichol.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/trind.generator.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/twlss.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/uniquecombs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/vcov.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/vis.gam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/ziP.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/html/ziplss.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/ACF.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/ACF.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/ACF.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Alfalfa.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Assay.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/BodyWeight.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Cefamandole.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Coef.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Dim.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Dim.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Dim.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Earthquake.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Extract.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Fatigue.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Gasoline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Glucose.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Initialize.varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/LDEsysMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Machines.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/MathAchSchool.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Names.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Names.pdBlocked.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Names.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Names.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Nitrendipene.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Oats.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Orthodont.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Ovary.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Oxboys.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Oxide.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/PBG.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Phenobarb.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Pixel.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Quinidine.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Rail.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/RatPupWeight.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Relaxin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Remifentanil.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Soybean.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Spruce.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Tetracycline1.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Tetracycline2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/VarCorr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.corExp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.corGaus.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.corLin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.corRatio.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.corSpatial.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.corSpher.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.default.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Variogram.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Wafer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Wheat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/Wheat2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/allCoef.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/anova.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/anova.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/as.matrix.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/as.matrix.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/as.matrix.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/asOneFormula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/asTable.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/augPred.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/balancedGrouped.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/bdf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/coef.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/coef.gnls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/coef.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/coef.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/coef.modelStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/coef.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/coef.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/coef.varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/collapse.groupedData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/collapse.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/compareFits.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/comparePred.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corAR1.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corARMA.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corCAR1.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corClasses.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corCompSymm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corExp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corFactor.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corFactor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corGaus.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corLin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corMatrix.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corMatrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corMatrix.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corMatrix.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corNatural.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corRatio.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corSpatial.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corSpher.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/corSymm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/ergoStool.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/fdHess.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/fitted.glsStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/fitted.gnlsStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/fitted.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/fitted.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/fitted.lmeStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/fitted.nlmeStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/fixed.effects.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/fixef.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/formula.pdBlocked.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/formula.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/formula.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/gapply.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getCovariate.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getCovariate.data.frame.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getCovariate.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getCovariate.varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getCovariateFormula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getData.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getData.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getData.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getGroups.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getGroups.data.frame.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getGroups.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getGroups.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getGroups.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getGroups.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getGroups.varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getGroupsFormula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getResponse.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getResponseFormula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/getVarCov.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/gls-internal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/glsControl.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/glsObject.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/glsStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/gnls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/gnlsControl.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/gnlsObject.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/gnlsStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/groupedData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/gsummary.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/intervals.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/intervals.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/intervals.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/intervals.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/isBalanced.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/isInitialized.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/lmList.groupedData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/lme.groupedData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/lme.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/lmeControl.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/lmeObject.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/lmeStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logDet.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logDet.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logDet.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logDet.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logLik.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logLik.glsStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logLik.gnls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logLik.gnlsStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logLik.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logLik.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logLik.lmeStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logLik.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/logLik.varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/model.matrix.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/needUpdate.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/needUpdate.modelStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/nlme-deprecated.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/nlme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/nlme.nlsList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/nlmeControl.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/nlmeObject.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/nlmeStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/nlsList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/nlsList.selfStart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pairs.compareFits.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pairs.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pairs.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdBlocked.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdClasses.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdCompSymm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdConstruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdConstruct.pdBlocked.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdDiag.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdFactor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdFactor.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdIdent.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdLogChol.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdMatrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdMatrix.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdNatural.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pdSymm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/phenoModel.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.ACF.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.Variogram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.augPred.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.compareFits.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.intervals.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.nffGroupedData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.nfnGroupedData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.nmGroupedData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.ranef.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/plot.ranef.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/pooledSD.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/predict.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/predict.gnls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/predict.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/predict.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/predict.nlme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/print.summary.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/print.varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/qqnorm.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/qqnorm.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/quinModel.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/random.effects.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/ranef.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/ranef.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/recalc.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/recalc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/recalc.modelStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/recalc.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/recalc.varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/residuals.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/residuals.glsStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/residuals.gnlsStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/residuals.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/residuals.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/residuals.lmeStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/residuals.nlmeStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/simulate.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/solve.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/solve.reStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/splitFormula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/summary.corStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/summary.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/summary.lmList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/summary.lme.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/summary.modelStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/summary.nlsList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/summary.pdMat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/summary.varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/update.modelStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/update.varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varClasses.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varComb.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varConstPower.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varConstProp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varExp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varFixed.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varFunc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varIdent.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varPower.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varWeights.glsStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varWeights.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nlme/html/varWeights.lmeStruct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nnet/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nnet/html/class.ind.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nnet/html/multinom.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nnet/html/nnet.Hess.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nnet/html/nnet.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nnet/html/predict.nnet.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/nnet/html/which.is.max.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/RngStream.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/children.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/clusterApply.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/detectCores.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/makeCluster.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/mcaffinity.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/mcfork.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/mclapply.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/mcparallel.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/parallel-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/pvec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/parallel/html/splitIndices.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/car.test.frame.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/car90.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/cu.summary.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/kyphosis.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/labels.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/meanvar.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/na.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/path.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/plot.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/plotcp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/post.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/predict.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/print.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/printcp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/prune.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/residuals.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/rpart-internal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/rpart.control.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/rpart.exp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/rpart.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/rsq.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/snip.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/solder.balance.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/stagec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/summary.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/text.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/rpart/html/xpred.rpart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/Kaver.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/Kenvl.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/Kfn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/Psim.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/SSI.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/Strauss.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/anova.trls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/correlogram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/expcov.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/ppgetregion.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/ppinit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/pplik.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/ppregion.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/predict.trls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/prmat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/semat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/surf.gls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/surf.ls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/trls.influence.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/trmat.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/spatial/html/variogram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/asVector.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/backSpline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/bs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/interpSpline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/ns.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/periodicSpline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/polySpline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/predict.bSpline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/predict.bs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/splineDesign.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/splineKnots.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/splineOrder.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/splines-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/splines/html/xyVector.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/AIC.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ARMAacf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ARMAtoMA.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Beta.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Binomial.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Cauchy.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Chisquare.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Distributions.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Exponential.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Fdist.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/GammaDist.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Geometric.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/HoltWinters.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Hypergeometric.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/IQR.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/KalmanLike.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Logistic.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Lognormal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/Multinom.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/approxfun.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ar.ols.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/arima.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ave.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/bandwidth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/bartlett.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/binom.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/biplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/biplot.princomp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/birthday.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/box.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/formula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/formula.nls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/friedman.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ftable.formula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ftable.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/getInitial.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/glm.control.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/glm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/glm.summaries.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/hclust.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/heatmap.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/identify.hclust.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/influence.measures.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/integrate.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/interaction.plot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/is.empty.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/isoreg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/kernapply.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/kernel.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/kmeans.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/kruskal.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ks.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ksmooth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/lag.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/lag.plot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/line.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/listof.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/lm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/lowess.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ls.diag.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/ls.print.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/lsfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/naprint.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/nextn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/nlm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/nlminb.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/nls.control.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/nls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/nobs.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/numericDeriv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/offset.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/oneway.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/optim.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/optimize.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/order.dendrogram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/p.adjust.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/pairwise.prop.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/pairwise.t.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/pairwise.table.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/pairwise.wilcox.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.HoltWinters.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.acf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.density.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.isoreg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.lm.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.ppr.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.profile.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.profile.nls.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.spec.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.stepfun.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/plot.ts.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/poisson.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/poly.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/power.anova.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/power.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/power.prop.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/power.t.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/pp.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/rect.hclust.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/relevel.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/reorder.dendrogram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/reorder.factor.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/replications.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/reshape.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/residuals.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/runmed.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/scatter.smooth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/screeplot.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/sd.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/se.contrast.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/selfStart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/setNames.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/shapiro.test.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/sigma.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/simulate.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/smooth.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/smooth.spline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/smoothEnds.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/sortedXyData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/spec.ar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/spec.pgram.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/spec.taper.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/spectrum.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/splinefun.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/start.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/stat.anova.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/stats-defunct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/stats-deprecated.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/stats-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats/html/step.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/confint-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/logLik-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/mle-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/mle.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/plot-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/profile-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/profile.mle-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/show-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/stats4-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/summary-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/summary.mle-class.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/update-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/stats4/html/vcov-methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/Surv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/Surv2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/Surv2data.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/Survmethods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/aareg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/aeqSurv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/aggregate.survfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/agreg.fit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/aml.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/anova.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/attrassign.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/basehaz.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/bladder.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/blogit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/brier.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/cch.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/cgd.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/cgd0.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/cipoisson.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/clogit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/cluster.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/colon.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/concordance.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/concordancefit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/cox.zph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/coxph.control.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/coxph.detail.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/coxph.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/coxph.wtest.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/coxphms.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/coxsurv.fit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/diabetic.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/dsurvreg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/finegray.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/flchain.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/frailty.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/gbsg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/heart.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/hoel.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/is.ratetable.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/kidney.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/levels.Surv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/lines.survfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/logLik.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/logan.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/lung.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/mgus.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/mgus2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/model.frame.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/model.matrix.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/myeloid.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/myeloma.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/nafld.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/neardate.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/nsk.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/nwtco.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/ovarian.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/pbc.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/pbcseq.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/plot.aareg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/plot.cox.zph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/plot.survfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/predict.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/predict.survreg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/print.aareg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/print.summary.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/print.summary.survexp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/print.summary.survfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/print.survfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/pseudo.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/pspline.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/pyears.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/quantile.survfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/ratetable.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/ratetableDate.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/rats.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/rats2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/reliability.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/residuals.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/residuals.survfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/residuals.survreg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/retinopathy.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/rhDNase.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/ridge.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/rotterdam.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/royston.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/rttright.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/solder.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/stanford2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/statefig.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/strata.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/summary.aareg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/summary.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/summary.pyears.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/summary.survexp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/summary.survfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survSplit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survcheck.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survcondense.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survdiff.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survexp.fit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survexp.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survexp.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survexp.us.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survfit.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survfit.formula.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survfit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survfit.matrix.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survfit.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survfit0.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survfitcoxph.fit.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survival-deprecated.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survival-internal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survobrien.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survreg.control.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survreg.distributions.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survreg.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survreg.object.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/survregDtest.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/tcut.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/tmerge.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/tobin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/transplant.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/udca.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/untangle.specials.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/uspop2.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/vcov.coxph.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/veteran.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/xtfrm.Surv.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/yates.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/survival/html/yates_setup.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tcltk/html/00Index.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tcltk/html/TclInterface.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tcltk/html/TkCommands.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tcltk/html/TkWidgetcmds.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tcltk/html/TkWidgets.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tcltk/html/tclServiceMode.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tools/html/matchConcordance.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tools/html/md5sum.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tools/html/package_dependencies.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/tools/html/package_native_routine_registration_skeleton.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/cite.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/clipboard.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/close.socket.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/combn.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' 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/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/hsearch-utils.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/install.packages.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/installed.packages.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/isS3method.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/isS3stdGen.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/localeToCharset.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/ls_str.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/maintainer.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/make.packages.html.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/make.socket.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/memory.size.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/menu.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/methods.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/mirrorAdmin.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/modifyList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/news.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/nsl.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/object.size.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/package.skeleton.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/packageDescription.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/packageName.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/packageStatus.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/page.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/person.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/personList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/process.events.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/prompt.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/promptData.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/promptPackage.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/rcompgen.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/read.DIF.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/read.fortran.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/read.fwf.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/read.socket.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/read.table.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/readRegistry.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/recover.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/relist.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/remove.packages.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/removeSource.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/roman.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/rtags.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/savehistory.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/select.list.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/sessionInfo.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/setRepositories.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/setWindowTitle.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/shortPathName.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/sourceutils.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/stack.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/str.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/strcapture.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/summaryRprof.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/tar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/toLatex.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/txtProgressBar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/type.convert.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/untar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/unzip.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/update.packages.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/upgrade.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/url.show.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/utils-defunct.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/utils-deprecated.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/utils-internal.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/utils-package.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/vignette.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/warnErrList.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/winDialog.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/winMenus.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/winProgressBar.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/winextras.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/write.table.html + for i in /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/utils/html/zip.html + chmod +x /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/R/sh/echo.sh + chmod +x /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/BATCH /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/COMPILE /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/INSTALL /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/LINK /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/R /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/REMOVE /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Rcmd /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Rd2pdf /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Rdconv /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Rdiff /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Rprof /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Rscript /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/SHLIB /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Stangle /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Sweave /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/build /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/check /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/config /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/exec /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/javareconf /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/libtool /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/mkinstalldirs /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/pager /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/rtags + chmod -x /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/library/mgcv/CITATION /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/doc/R/CAPABILITIES + '[' '!' -d /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/include ']' ~/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R ~/build/BUILD/R-4.4.2-build/R-4.4.2 + pushd /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R + ln -s ../../include/R include + popd ~/build/BUILD/R-4.4.2-build/R-4.4.2 + for i in tex/latex bibtex/bib bibtex/bst + mkdir -p /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/texlive/texmf-dist/tex/latex + cd /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/texlive/texmf-dist/tex/latex + ln -s /usr/share/R/texmf/tex/latex R + for i in tex/latex bibtex/bib bibtex/bst + mkdir -p /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/texlive/texmf-dist/bibtex/bib + cd /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/texlive/texmf-dist/bibtex/bib + ln -s /usr/share/R/texmf/bibtex/bib R + for i in tex/latex bibtex/bib bibtex/bst + mkdir -p /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/texlive/texmf-dist/bibtex/bst + cd /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/texlive/texmf-dist/bibtex/bst + ln -s /usr/share/R/texmf/bibtex/bst R + /usr/bin/find-debuginfo -j64 --strict-build-id -m -i --build-id-seed 4.4.2-2.0.riscv64.fc42 --unique-debug-suffix -4.4.2-2.0.riscv64.fc42.riscv64 --unique-debug-src-base R-4.4.2-2.0.riscv64.fc42.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/R-4.4.2-build/R-4.4.2 find-debuginfo: starting Extracting debug info from 33 files DWARF-compressing 33 files sepdebugcrcfix: Updated 33 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/R-4.4.2-2.0.riscv64.fc42.riscv64 find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs --files /usr/lib64/R/bin/ mangling shebang in /usr/share/R/sh/echo.sh from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/bin/R from /bin/sh to #!/usr/bin/sh + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j64 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j64 /builddir/build/BUILD/R-4.4.2-build/BUILDROOT /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/libRmath.a: replacing with normalized version Scanned 605 directories and 13922 files, processed 11367 inodes, 1 modified (1 replaced + 0 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/R-4.4.2-build/SPECPARTS/rpm-debuginfo.specpart Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.892Mxh + umask 022 + cd /builddir/build/BUILD/R-4.4.2-build + CFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.4.2 + ulimit -s 16384 + TZ=Europe/Paris + make check make[1]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests' make[2]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests' make[3]: Entering directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests/Examples' Testing examples for package ‘base’ Error: running examples in ‘base-Ex.R’ failed Error: testing 'base' failed Execution halted make[3]: *** [Makefile:37: test-Examples-Base] Error 1 make[3]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests/Examples' make[2]: *** [Makefile.common:208: test-Examples] Error 2 make[2]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests' make[1]: *** [Makefile.common:193: test-all-basics] Error 1 make[1]: Leaving directory '/builddir/build/BUILD/R-4.4.2-build/R-4.4.2/tests' make: *** [Makefile:310: check] Error 2 + : + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-4.4.2-2.0.riscv64.fc42.riscv64 Processing files: R-core-4.4.2-2.0.riscv64.fc42.riscv64 warning: Duplicate build-ids /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/bin/Rscript and /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Rscript warning: absolute symlink: /usr/share/texlive/texmf-dist/bibtex/bib/R -> /usr/share/R/texmf/bibtex/bib warning: absolute symlink: /usr/share/texlive/texmf-dist/bibtex/bst/R -> /usr/share/R/texmf/bibtex/bst warning: absolute symlink: /usr/share/texlive/texmf-dist/tex/latex/R -> /usr/share/R/texmf/tex/latex Provides: R(ABI) = 4.4 R(KernSmooth) = 2.23.24 R(MASS) = 7.3.61 R(Matrix) = 1.7.1 R(base) = 4.4.2 R(boot) = 1.3.31 R(class) = 7.3.22 R(cluster) = 2.1.6 R(codetools) = 0.2.20 R(compiler) = 4.4.2 R(datasets) = 4.4.2 R(foreign) = 0.8.87 R(grDevices) = 4.4.2 R(graphics) = 4.4.2 R(grid) = 4.4.2 R(lattice) = 0.22.6 R(methods) = 4.4.2 R(mgcv) = 1.9.1 R(nlme) = 3.1.166 R(nnet) = 7.3.19 R(parallel) = 4.4.2 R(rpart) = 4.1.23 R(spatial) = 7.3.17 R(splines) = 4.4.2 R(stats) = 4.4.2 R(stats4) = 4.4.2 R(survival) = 3.7.0 R(tcltk) = 4.4.2 R(tools) = 4.4.2 R(translations) = 4.4.2 R(utils) = 4.4.2 R-KernSmooth = 2.23.24 R-MASS = 7.3.61 R-Matrix = 1.7.1 R-base = 4.4.2 R-boot = 1.3.31 R-class = 7.3.22 R-cluster = 2.1.6 R-codetools = 0.2.20 R-compiler = 4.4.2 R-core = 4.4.2-2.0.riscv64.fc42 R-core(riscv-64) = 4.4.2-2.0.riscv64.fc42 R-datasets = 4.4.2 R-foreign = 0.8.87 R-grDevices = 4.4.2 R-graphics = 4.4.2 R-grid = 4.4.2 R-lattice = 0.22.6 R-methods = 4.4.2 R-mgcv = 1.9.1 R-nlme = 3.1.166 R-nnet = 7.3.19 R-parallel = 4.4.2 R-rpart = 4.1.23 R-spatial = 7.3.17 R-splines = 4.4.2 R-stats = 4.4.2 R-stats4 = 4.4.2 R-survival = 3.7.0 R-tcltk = 4.4.2 R-tools = 4.4.2 R-translations = 4.4.2 R-utils = 4.4.2 config(R-core) = 4.4.2-2.0.riscv64.fc42 libR.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /bin/sh /usr/bin/sh ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libX11.so.6()(64bit) libXmu.so.6()(64bit) libXt.so.6()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libcairo.so.2()(64bit) libcurl.so.4()(64bit) libdeflate.so.0()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgobject-2.0.so.0()(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libicui18n.so.76()(64bit) libicuuc.so.76()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) liblzma.so.5()(64bit) liblzma.so.5(XZ_5.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libpango-1.0.so.0()(64bit) libpangocairo-1.0.so.0()(64bit) libpcre2-8.so.0()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libreadline.so.8()(64bit) libtcl8.6.so()(64bit) libtiff.so.6()(64bit) libtiff.so.6(LIBTIFF_4.0)(64bit) libtirpc.so.3()(64bit) libtirpc.so.3(TIRPC_0.3.0)(64bit) libtk8.6.so()(64bit) libtre.so.5()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Obsoletes: R-Matrix < 0.999375-7 Processing files: R-core-devel-4.4.2-2.0.riscv64.fc42.riscv64 Provides: R-Matrix-devel = 1.7.1 R-core-devel = 4.4.2-2.0.riscv64.fc42 R-core-devel(riscv-64) = 4.4.2-2.0.riscv64.fc42 pkgconfig(libR) = 4.4.2 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config Obsoletes: R-Matrix-devel < 0.999375-7 Recommends: devscripts-checkbashisms qpdf tex(inconsolata.sty) tex(latex) texinfo-tex tidy Processing files: R-devel-4.4.2-2.0.riscv64.fc42.riscv64 Processing files: R-java-4.4.2-2.0.riscv64.fc42.riscv64 Processing files: R-java-devel-4.4.2-2.0.riscv64.fc42.riscv64 Processing files: libRmath-4.4.2-2.0.riscv64.fc42.riscv64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.EZFj7P + umask 022 + cd /builddir/build/BUILD/R-4.4.2-build + cd R-4.4.2 + LICENSEDIR=/builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/licenses/libRmath + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/licenses/libRmath + cp -pr /builddir/build/BUILD/R-4.4.2-build/R-4.4.2/doc/COPYING /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/share/licenses/libRmath + RPM_EC=0 ++ jobs -p + exit 0 Provides: libRmath = 4.4.2-2.0.riscv64.fc42 libRmath(riscv-64) = 4.4.2-2.0.riscv64.fc42 libRmath.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Processing files: libRmath-devel-4.4.2-2.0.riscv64.fc42.riscv64 Provides: libRmath-devel = 4.4.2-2.0.riscv64.fc42 libRmath-devel(riscv-64) = 4.4.2-2.0.riscv64.fc42 pkgconfig(libRmath) = 4.4.2 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config Processing files: libRmath-static-4.4.2-2.0.riscv64.fc42.riscv64 Provides: libRmath-static = 4.4.2-2.0.riscv64.fc42 libRmath-static(riscv-64) = 4.4.2-2.0.riscv64.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-debugsource-4.4.2-2.0.riscv64.fc42.riscv64 Provides: R-debugsource = 4.4.2-2.0.riscv64.fc42 R-debugsource(riscv-64) = 4.4.2-2.0.riscv64.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-debuginfo-4.4.2-2.0.riscv64.fc42.riscv64 Provides: R-debuginfo = 4.4.2-2.0.riscv64.fc42 R-debuginfo(riscv-64) = 4.4.2-2.0.riscv64.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(riscv-64) = 4.4.2-2.0.riscv64.fc42 Processing files: R-core-debuginfo-4.4.2-2.0.riscv64.fc42.riscv64 warning: Duplicate build-ids /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib/debug/usr/bin/Rscript-4.4.2-2.0.riscv64.fc42.riscv64.debug and /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib/debug/usr/lib64/R/bin/Rscript-4.4.2-2.0.riscv64.fc42.riscv64.debug Provides: R-core-debuginfo = 4.4.2-2.0.riscv64.fc42 R-core-debuginfo(riscv-64) = 4.4.2-2.0.riscv64.fc42 debuginfo(build-id) = 0cc4d48a4ca5ac0048289584938e441a7f179ef4 debuginfo(build-id) = 0d410b472cc85196ae0bb61e822658aed081da67 debuginfo(build-id) = 1afb1a47be8ccd030f2db22827ac3802e10b3894 debuginfo(build-id) = 2f22c95d9cd3e990ac8c8d81e07787b67d18cd2f debuginfo(build-id) = 34ecdf989585985d90d3da349301aa02ec56ce86 debuginfo(build-id) = 39d22f7985110591b1a9a8e28be61473ecea7993 debuginfo(build-id) = 43b8ca708e1434430f0dbb3d8c3a45fe369b3385 debuginfo(build-id) = 4ab47870daff2d15421f12738422d75f436ecdbf debuginfo(build-id) = 5520167e6f151dfd29d129c77f4c437c65c7bd4b debuginfo(build-id) = 5b00a83411d06c90e536b0676e3a8b7dcf7920c1 debuginfo(build-id) = 729b2db446ad5b769507b7ccde0f8b3e4e4702ac debuginfo(build-id) = 74600b2ddede217f37af9413150c82e71261df40 debuginfo(build-id) = 76eee4ce993f4eb6d00ef7a11e6e390872b8312c debuginfo(build-id) = 7a62585a5c241687851f1cba6156864aec0a939a debuginfo(build-id) = 91d67cb4db40fb62436d65163f01ae971a31d258 debuginfo(build-id) = a5498679c1540e42f45542ee6516abd00c88a050 debuginfo(build-id) = c5ef8f4f8b2c7e6917049851197410d34ea3c3bb debuginfo(build-id) = cfdebabcf6a4162680358fe87ea4a9c5254c5832 debuginfo(build-id) = d72fc91dca54eb5265267c27c75b49586614ce7b debuginfo(build-id) = d75f0225e948ddb14d16edf49d219ea5dcfef795 debuginfo(build-id) = d89ffcf7d0fe34ec5d22ede02c0e08ff74fdd1a3 debuginfo(build-id) = d94108bfd864cf635928dea09c010556ece65501 debuginfo(build-id) = d96cf2b26bd35d0cdff15b3ea58ce48d355bf69c debuginfo(build-id) = d9ee026c2cf2671161f2c2fa2abf21d2640b0f52 debuginfo(build-id) = e6aff5c7cc38f0543e5206dacc0e89614b79df00 debuginfo(build-id) = eb260fa75627996385e6e6d75e88a3b229b4a69b debuginfo(build-id) = ebd3f280fa16baaf4ab37f42627bbbe383a1ba39 debuginfo(build-id) = edf2c9cd8e75ebb3334199c3f641ceb866b944fd debuginfo(build-id) = ef0388d97f4c927c166d5a4813675bf7a8887a05 debuginfo(build-id) = f0fcf98daea392c71dbe9433da7a6b3952fe2b3c debuginfo(build-id) = f2ec301fd8c778528c1185d0b1a9b5968e773157 debuginfo(build-id) = nilnil libR.so-4.4.2-2.0.riscv64.fc42.riscv64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(riscv-64) = 4.4.2-2.0.riscv64.fc42 Processing files: libRmath-debuginfo-4.4.2-2.0.riscv64.fc42.riscv64 Provides: debuginfo(build-id) = ef025a75f51120ea3b5e00cd7b3a46523ddf9797 libRmath-debuginfo = 4.4.2-2.0.riscv64.fc42 libRmath-debuginfo(riscv-64) = 4.4.2-2.0.riscv64.fc42 libRmath.so-4.4.2-2.0.riscv64.fc42.riscv64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(riscv-64) = 4.4.2-2.0.riscv64.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/R-4.4.2-build/BUILDROOT Wrote: /builddir/build/RPMS/R-java-devel-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/R-devel-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/R-java-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/R-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-devel-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/R-debuginfo-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/R-core-devel-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-debuginfo-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-static-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/R-debugsource-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/R-core-debuginfo-4.4.2-2.0.riscv64.fc42.riscv64.rpm Wrote: /builddir/build/RPMS/R-core-4.4.2-2.0.riscv64.fc42.riscv64.rpm RPM build warnings: Duplicate build-ids /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/bin/Rscript and /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib64/R/bin/Rscript absolute symlink: /usr/share/texlive/texmf-dist/bibtex/bib/R -> /usr/share/R/texmf/bibtex/bib absolute symlink: /usr/share/texlive/texmf-dist/bibtex/bst/R -> /usr/share/R/texmf/bibtex/bst absolute symlink: /usr/share/texlive/texmf-dist/tex/latex/R -> /usr/share/R/texmf/tex/latex Duplicate build-ids /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib/debug/usr/bin/Rscript-4.4.2-2.0.riscv64.fc42.riscv64.debug and /builddir/build/BUILD/R-4.4.2-build/BUILDROOT/usr/lib/debug/usr/lib64/R/bin/Rscript-4.4.2-2.0.riscv64.fc42.riscv64.debug Child return code was: 0