Mock Version: 3.5 Mock Version: 3.5 Mock Version: 3.5 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target riscv64 --nodeps /builddir/build/SPECS/R.spec'], chrootPath='/var/lib/mock/f38-build-723727-99279/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=1209600uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --noclean --target riscv64 --nodeps /builddir/build/SPECS/R.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1687132800 Wrote: /builddir/build/SRPMS/R-4.3.1-1.0.riscv64.fc38.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target riscv64 --nodeps /builddir/build/SPECS/R.spec'], chrootPath='/var/lib/mock/f38-build-723727-99279/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=1209600uid=991gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --noclean --target riscv64 --nodeps /builddir/build/SPECS/R.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1687132800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.DUSrkl + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf R-4.3.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/R-4.3.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd R-4.3.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + echo 'Patch #0 (R-3.3.0-fix-java_path-in-javareconf.patch):' Patch #0 (R-3.3.0-fix-java_path-in-javareconf.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .fixpath --fuzz=0 patching file src/scripts/javareconf.in Hunk #1 succeeded at 79 (offset 1 line). + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.kx24rG + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.3.1 + sed -i -e '/R_LIBS_SITE=/s/^/#/g' etc/Renviron.in + echo 'R_LIBS_SITE=${R_LIBS_SITE-'\''/usr/local/lib/R/site-library:/usr/local/lib/R/library:/usr/lib64/R/library:/usr/share/R/library'\''}' + export R_PDFVIEWER=/usr/bin/xdg-open + R_PDFVIEWER=/usr/bin/xdg-open + export R_BROWSER=/usr/bin/xdg-open + R_BROWSER=/usr/bin/xdg-open + export JAVA_HOME=/usr/lib/jvm/jre + JAVA_HOME=/usr/lib/jvm/jre + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']' ++ find . -type f -name configure -print + for file in $(find . -type f -name configure -print) + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2023-06-08 23:16:16.000000000 +0100 +++ ./configure 2023-06-19 08:42:43.549000696 +0100 @@ -2542,7 +2542,7 @@ #ifdef __cplusplus extern "C" #endif -char $2 (); +__attribute__ ((used)) char $2 (); /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ + /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure + diff -u ./configure.backup ./configure + mv ./configure.backup ./configure + /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure + diff -u ./configure.backup ./configure --- ./configure.backup 2023-06-19 08:42:43.549000696 +0100 +++ ./configure 2023-06-19 08:42:43.949000267 +0100 @@ -12176,7 +12176,7 @@ # Transform an extracted symbol line into a proper C declaration. # Some systems (esp. on ia64) link data and code symbols differently, # so use this general approach. -lt_cv_sys_global_symbol_to_cdecl="sed -n"\ +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" $lt_cdecl_hook\ " -e 's/^T .* \(.*\)$/extern int \1();/p'"\ " -e 's/^$symcode$symcode* .* \(.*\)$/extern char \1;/p'" @@ -59350,7 +59350,7 @@ compiler='`$ECHO "$compiler" | $SED "$delay_single_quote_subst"`' GCC='`$ECHO "$GCC" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_pipe='`$ECHO "$lt_cv_sys_global_symbol_pipe" | $SED "$delay_single_quote_subst"`' -lt_cv_sys_global_symbol_to_cdecl='`$ECHO "$lt_cv_sys_global_symbol_to_cdecl" | $SED "$delay_single_quote_subst"`' +lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'" lt_cv_sys_global_symbol_to_import='`$ECHO "$lt_cv_sys_global_symbol_to_import" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address" | $SED "$delay_single_quote_subst"`' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $SED "$delay_single_quote_subst"`' + '[' 1 = 1 ']' +++ dirname ./configure ++ find . -name config.guess -o -name config.sub + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./tools/config.sub + '[' -f /usr/lib/rpm/redhat/config.sub ']' + /usr/bin/rm -f ./tools/config.sub ++ basename ./tools/config.sub + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./tools/config.sub '/usr/lib/rpm/redhat/config.sub' -> './tools/config.sub' + for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub) ++ basename ./tools/config.guess + '[' -f /usr/lib/rpm/redhat/config.guess ']' + /usr/bin/rm -f ./tools/config.guess ++ basename ./tools/config.guess + /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./tools/config.guess '/usr/lib/rpm/redhat/config.guess' -> './tools/config.guess' + '[' 1 = 1 ']' + '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']' ++ find . -name ltmain.sh + for i in $(find . -name ltmain.sh) + /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./tools/ltmain.sh + tee CONFIGURE.log ++ grep -q runstatedir=DIR ./configure ++ echo --runstatedir=/run + ./configure --build=riscv64-redhat-linux-gnu --host=riscv64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --runstatedir=/run --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info rdocdir=/usr/share/doc/R rincludedir=/usr/include/R rsharedir=/usr/share/R --with-system-tre --with-lapack=flexiblas --with-blas=flexiblas --with-tcl-config=/usr/lib64/tclConfig.sh --with-tk-config=/usr/lib64/tkConfig.sh --enable-R-shlib --enable-prebuilt-html --enable-R-profiling --enable-memory-profiling configure: WARNING: unrecognized options: --disable-dependency-tracking checking build system type... riscv64-redhat-linux-gnu checking host system type... riscv64-redhat-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /usr/bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... /usr/bin/sed checking for which... /usr/bin/which checking for less... no checking for more... /usr/bin/more checking for gtar... /usr/bin/gtar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 5.1... yes checking for ginstall-info... no checking for install-info... /usr/sbin/install-info checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... found zi4.sty checking for unzip... /usr/bin/unzip checking for zip... /usr/bin/zip checking for gzip... /usr/bin/gzip checking for bzip2... /usr/bin/bzip2 using default browser ... /usr/bin/xdg-open checking for /usr/bin/xdg-open... /usr/bin/xdg-open checking for working aclocal... found checking for working autoconf... found checking for working autoheader... found checking for bison... no checking for byacc... no checking for yacc... no checking for notangle... false checking for realpath... /usr/bin/realpath checking for pkg-config... /usr/bin/pkg-config checking for riscv64-redhat-linux-gnu-gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking whether gcc needs -traditional... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for wchar.h... yes checking for minix/config.h... no checking for sys/time.h... yes checking for sys/param.h... yes checking whether it is safe to define __EXTENSIONS__... yes checking whether _XOPEN_SOURCE should be defined... no checking how to run the C preprocessor... gcc -E looking for a modern Fortran compiler checking for riscv64-redhat-linux-gnu-gfortran... no checking for riscv64-redhat-linux-gnu-g95... no checking for riscv64-redhat-linux-gnu-xlf95... no checking for riscv64-redhat-linux-gnu-f95... no checking for riscv64-redhat-linux-gnu-fort... no checking for riscv64-redhat-linux-gnu-ifort... no checking for riscv64-redhat-linux-gnu-ifc... no checking for riscv64-redhat-linux-gnu-efc... no checking for riscv64-redhat-linux-gnu-pgfortran... no checking for riscv64-redhat-linux-gnu-pgf95... no checking for riscv64-redhat-linux-gnu-lf95... no checking for riscv64-redhat-linux-gnu-ftn... no checking for riscv64-redhat-linux-gnu-nagfor... no checking for riscv64-redhat-linux-gnu-xlf90... no checking for riscv64-redhat-linux-gnu-f90... no checking for riscv64-redhat-linux-gnu-pgf90... no checking for riscv64-redhat-linux-gnu-pghpf... no checking for riscv64-redhat-linux-gnu-epcf90... no checking for riscv64-redhat-linux-gnu-g77... no checking for riscv64-redhat-linux-gnu-xlf... no checking for riscv64-redhat-linux-gnu-f77... no checking for riscv64-redhat-linux-gnu-frt... no checking for riscv64-redhat-linux-gnu-pgf77... no checking for riscv64-redhat-linux-gnu-cf77... no checking for riscv64-redhat-linux-gnu-fort77... no checking for riscv64-redhat-linux-gnu-fl32... no checking for riscv64-redhat-linux-gnu-af77... no checking for gfortran... gfortran checking whether the compiler supports GNU Fortran... yes checking whether gfortran accepts -g... yes checking whether the compiler supports GNU C++... yes checking whether g++ accepts -g... yes checking for g++ option to enable C++11 features... none needed checking whether g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer can compile C++ code... yes checking how to run the C++ preprocessor... g++ -E checking whether __attribute__((visibility())) is supported... yes checking whether gcc accepts -fvisibility... yes checking whether g++ accepts -fvisibility... yes checking whether gfortran accepts -fvisibility... yes checking for riscv64-redhat-linux-gnu-gcc... no checking for riscv64-redhat-linux-gnu-objcc... no checking for riscv64-redhat-linux-gnu-objc... no checking for riscv64-redhat-linux-gnu-cc... no checking for riscv64-redhat-linux-gnu-CC... no checking for riscv64-redhat-linux-gnu-clang... no checking for gcc... gcc checking whether the compiler supports GNU Objective C... no checking whether gcc accepts -g... no checking whether g++ can compile ObjC++... no checking whether can compile ObjC++... no checking for Objective C++ compiler... no working ObjC++ compiler found checking whether gcc -std=gnu17 is a C17 compiler... yes checking whether gcc -std=gnu23 is a C23 compiler... no checking whether gcc -std=gnu2x is a C23 compiler... yes checking whether gcc -std=gnu90 is a C90 compiler... yes checking whether gcc -std=gnu99 is a C99 compiler... yes checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert riscv64-redhat-linux-gnu file names to riscv64-redhat-linux-gnu format... func_convert_file_noop checking how to convert riscv64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for riscv64-redhat-linux-gnu-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for riscv64-redhat-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for riscv64-redhat-linux-gnu-ar... (cached) ar checking for archiver @FILE support... @ checking for riscv64-redhat-linux-gnu-strip... no checking for strip... strip checking for riscv64-redhat-linux-gnu-ranlib... no checking for ranlib... ranlib checking for gawk... gawk checking command to parse /usr/bin/nm -B output from gcc object... ./configure: line 12182: -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p': No such file or directory ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for riscv64-redhat-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... no checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for cos in -lm... yes checking for sin in -lm... yes checking for dlopen in -ldl... yes checking for readline/history.h... yes checking for readline/readline.h... yes checking for rl_callback_read_char in -lreadline... yes checking for history_truncate_file... yes checking for tilde_expand_word... yes checking whether rl_completion_matches exists and is declared... yes checking whether rl_resize_terminal exists and is declared... yes checking whether rl_sort_completion_matches exists and is declared... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for sys/wait.h that is POSIX.1 compatible... yes checking for dlfcn.h... (cached) yes checking for fcntl.h... yes checking for glob.h... yes checking for grp.h... yes checking for pwd.h... yes checking for sched.h... yes checking for strings.h... 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checking whether 'struct tm' includes tm_zone... yes checking whether 'struct tm' includes tm_gmtoff... yes checking for dgemm_ in -lflexiblas... yes checking whether double complex BLAS can be used... yes checking whether the BLAS is complete... yes checking for dpstrf_... yes checking for iconv.h... yes checking for iconv... yes checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes checking whether iconv accepts "CP1252"... yes checking for iconvlist... no checking for iconv... yes checking for iconv declaration... extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for wchar.h... 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(cached) -fopenmp checking for recommended packages... yes checking whether NLS is requested... yes Configuring src/extra/intl directory checking for a race-free mkdir -p... /usr/bin/mkdir -p checking whether we are using the GNU C Library 2 or newer... yes checking for riscv64-redhat-linux-gnu-ranlib... ranlib checking for simple visibility declarations... yes checking for stdint.h... yes checking for getpagesize... yes checking for working mmap... yes checking whether integer division by zero raises SIGFPE... no checking for inttypes.h... yes checking for unsigned long long int... yes checking for inttypes.h... (cached) yes checking whether the inttypes.h PRIxNN macros are broken... no checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for shared library run path origin... done ./configure: line 54962: cd: /lib64/lp64d/../lib64/lp64d/: No such file or directory ./configure: line 54962: cd: /usr/lib64/lp64d/../lib64/lp64d/: No such file or directory checking whether imported symbols can be declared weak... yes checking for multithread API to use... none checking for argz.h... yes checking for inttypes.h... (cached) yes checking for limits.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... (cached) yes checking for getcwd... yes checking for getegid... yes checking for geteuid... yes checking for getgid... yes checking for getuid... yes checking for mempcpy... (cached) yes checking for munmap... yes checking for stpcpy... yes checking for strcasecmp... yes checking for strdup... 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(cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands configure: WARNING: unrecognized options: --disable-dependency-tracking R is now configured for riscv64-redhat-linux-gnu Source directory: . Installation directory: /usr C compiler: gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer Fortran fixed-form compiler: gfortran -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules Default C++ compiler: g++ -std=gnu++17 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer C++11 compiler: g++ -std=gnu++11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer C++14 compiler: g++ -std=gnu++14 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer C++17 compiler: g++ -std=gnu++17 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer C++20 compiler: g++ -std=gnu++20 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer C++23 compiler: g++ -std=gnu++23 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer Fortran free-form compiler: gfortran -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules Obj-C compiler: Interfaces supported: X11, tcltk External libraries: pcre2, readline, BLAS(FlexiBlas), LAPACK(generic), tre, curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, R profiling, memory profiling, static HTML Capabilities skipped: Options not enabled: shared BLAS Recommended packages: yes + cat CONFIGURE.log + grep -A30 'R is now' - + make V=1 make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/m4' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/m4' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/tools' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tools' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/html' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/html' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/manual' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/etc' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/etc' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/share' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/share' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/scripts' creating src/scripts/R.fe make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/scripts' mkdir -p -- ../../bin make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/scripts' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/scripts' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/include' mkdir -p -- ../../include make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/include/R_ext' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/include' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/extra' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/extra' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/appl' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c integrate.c -o integrate.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c interv.c -o interv.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c maxcol.c -o maxcol.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c optim.c -o optim.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pretty.c -o pretty.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c uncmin.c -o uncmin.o gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dchdc.f -o dchdc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dchdc.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpbfa.f -o dpbfa.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dpbfa.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpbsl.f -o dpbsl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dpbsl.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpoco.f -o dpoco.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dpoco.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpodi.f -o dpodi.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dpodi.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dpofa.f -o dpofa.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dpofa.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dposl.f -o dposl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dposl.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrdc.f -o dqrdc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dqrdc.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrdc2.f -o dqrdc2.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dqrdc2.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrls.f -o dqrls.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dqrls.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrsl.f -o dqrsl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dqrsl.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dqrutl.f -o dqrutl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dqrutl.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dsvdc.f -o dsvdc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dsvdc.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dtrco.f -o dtrco.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dtrco.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dtrsl.f -o dtrsl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dtrsl.f: Warning: -D_GLIBCXX_ASSERTIONS not defined ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/appl' #@make install-Linpack make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/appl' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/nmath' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mlutils.c -o mlutils.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c d1mach.c -o d1mach.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c i1mach.c -o i1mach.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmax2.c -o fmax2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmin2.c -o fmin2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fprec.c -o fprec.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fround.c -o fround.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ftrunc.c -o ftrunc.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sign.c -o sign.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fsign.c -o fsign.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imax2.c -o imax2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imin2.c -o imin2.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chebyshev.c -o chebyshev.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c log1p.c -o log1p.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgammacor.c -o lgammacor.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gammalims.c -o gammalims.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stirlerr.c -o stirlerr.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bd0.c -o bd0.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma.c -o gamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgamma.c -o lgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c beta.c -o beta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lbeta.c -o lbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c polygamma.c -o polygamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cospi.c -o cospi.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_i.c -o bessel_i.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_j.c -o bessel_j.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_k.c -o bessel_k.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_y.c -o bessel_y.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c choose.c -o choose.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c snorm.c -o snorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sexp.c -o sexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgamma.c -o dgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgamma.c -o pgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgamma.c -o qgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgamma.c -o rgamma.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbeta.c -o dbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbeta.c -o pbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbeta.c -o qbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbeta.c -o rbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dunif.c -o dunif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c punif.c -o punif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qunif.c -o qunif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c runif.c -o runif.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnorm.c -o dnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnorm.c -o pnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnorm.c -o qnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnorm.c -o rnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlnorm.c -o dlnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plnorm.c -o plnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlnorm.c -o qlnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlnorm.c -o rlnorm.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c df.c -o df.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pf.c -o pf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qf.c -o qf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rf.c -o rf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnf.c -o dnf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dt.c -o dt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pt.c -o pt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qt.c -o qt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rt.c -o rt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnt.c -o dnt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dchisq.c -o dchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pchisq.c -o pchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qchisq.c -o qchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rchisq.c -o rchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnchisq.c -o rnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbinom.c -o dbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbinom.c -o pbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbinom.c -o qbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbinom.c -o rbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rmultinom.c -o rmultinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dcauchy.c -o dcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pcauchy.c -o pcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qcauchy.c -o qcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rcauchy.c -o rcauchy.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dexp.c -o dexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pexp.c -o pexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qexp.c -o qexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rexp.c -o rexp.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgeom.c -o dgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgeom.c -o pgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgeom.c -o qgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgeom.c -o rgeom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dhyper.c -o dhyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c phyper.c -o phyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qhyper.c -o qhyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rhyper.c -o rhyper.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbinom.c -o dnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbinom.c -o pnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom.c -o qnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnbinom.c -o rnbinom.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dpois.c -o dpois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ppois.c -o ppois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qpois.c -o qpois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpois.c -o rpois.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dweibull.c -o dweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pweibull.c -o pweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qweibull.c -o qweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rweibull.c -o rweibull.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlogis.c -o dlogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plogis.c -o plogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlogis.c -o qlogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlogis.c -o rlogis.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnchisq.c -o dnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnchisq.c -o pnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnchisq.c -o qnchisq.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbeta.c -o dnbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbeta.c -o pnbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbeta.c -o qnbeta.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnf.c -o pnf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnt.c -o pnt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnf.c -o qnf.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnt.c -o qnt.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ptukey.c -o ptukey.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qtukey.c -o qtukey.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c toms708.c -o toms708.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c wilcox.c -o wilcox.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/nmath' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/nmath' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/unix' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rembedded.c -o Rembedded.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dynload.c -o dynload.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c system.c -o system.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sys-unix.c -o sys-unix.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sys-std.c -o sys-std.o gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/unix' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/unix' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -DR_HOME='"/builddir/build/BUILD/R-4.3.1"' \ -o Rscript ./Rscript.c make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/unix' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/unix' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making altclasses.d from altclasses.c making altrep.d from altrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making clippath.d from clippath.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making flexiblas.d from flexiblas.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making machine.d from machine.c making main.d from main.c making mapply.d from mapply.c making mask.d from mask.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making patterns.d from patterns.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/main' gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c CommandLineArgs.c -o CommandLineArgs.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rdynload.c -o Rdynload.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Renviron.c -o Renviron.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c RNG.c -o RNG.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agrep.c -o agrep.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c altclasses.c -o altclasses.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c altrep.c -o altrep.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c apply.c -o apply.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c arithmetic.c -o arithmetic.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c array.c -o array.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c attrib.c -o attrib.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bind.c -o bind.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c builtin.c -o builtin.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c character.c -o character.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c clippath.c -o clippath.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coerce.c -o coerce.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c colors.c -o colors.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c complex.c -o complex.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c connections.c -o connections.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c context.c -o context.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cum.c -o cum.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dcf.c -o dcf.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c datetime.c -o datetime.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c debug.c -o debug.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c deparse.c -o deparse.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devices.c -o devices.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dotcode.c -o dotcode.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dounzip.c -o dounzip.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dstruct.c -o dstruct.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c duplicate.c -o duplicate.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c edit.c -o edit.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c engine.c -o engine.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c envir.c -o envir.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c errors.c -o errors.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c eval.c -o eval.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c flexiblas.c -o flexiblas.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c format.c -o format.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gevents.c -o gevents.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gram.c -o gram.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gram-ex.c -o gram-ex.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c graphics.c -o graphics.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c grep.c -o grep.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c identical.c -o identical.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c inlined.c -o inlined.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c inspect.c -o inspect.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c internet.c -o internet.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c iosupport.c -o iosupport.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lapack.c -o lapack.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c list.c -o list.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c localecharset.c -o localecharset.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c logic.c -o logic.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c machine.c -o machine.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c main.c -o main.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mapply.c -o mapply.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mask.c -o mask.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c match.c -o match.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c memory.c -o memory.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c names.c -o names.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c objects.c -o objects.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c options.c -o options.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c paste.c -o paste.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c patterns.c -o patterns.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c platform.c -o platform.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plot.c -o plot.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plot3d.c -o plot3d.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plotmath.c -o plotmath.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c print.c -o print.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c printarray.c -o printarray.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c printvector.c -o printvector.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c printutils.c -o printutils.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qsort.c -o qsort.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c radixsort.c -o radixsort.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c random.c -o random.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c raw.c -o raw.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c registration.c -o registration.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c relop.c -o relop.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlocale.c -o rlocale.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c saveload.c -o saveload.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c scan.c -o scan.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c seq.c -o seq.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c serialize.c -o serialize.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sort.c -o sort.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c source.c -o source.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c split.c -o split.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sprintf.c -o sprintf.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c startup.c -o startup.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c subassign.c -o subassign.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c subscript.c -o subscript.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c subset.c -o subset.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c summary.c -o summary.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sysutils.c -o sysutils.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c times.c -o times.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c unique.c -o unique.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c util.c -o util.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c version.c -o version.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c g_alab_her.c -o g_alab_her.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c g_cntrlify.c -o g_cntrlify.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c g_fontdb.c -o g_fontdb.o gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c g_her_glyph.c -o g_her_glyph.o gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c xxxpr.f -o xxxpr.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: xxxpr.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gcc -shared -fopenmp -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o clippath.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o flexiblas.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o machine.o main.o mapply.o mask.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` -lflexiblas -L -L -lgfortran -lm -lreadline -ltre -lpcre2-8 -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/main' mkdir -p -- /builddir/build/BUILD/R-4.3.1/bin/exec mkdir -p -- /builddir/build/BUILD/R-4.3.1/lib make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/main' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/main' gcc -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rmain.c -o Rmain.o gcc -Wl,--export-dynamic -fopenmp -L"../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R.bin Rmain.o -lR make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/main' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/main' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/main' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/internet' making Rhttpd.d from Rhttpd.c making Rsock.d from Rsock.c making internet.d from internet.c making libcurl.d from libcurl.c making sock.d from sock.c making sockconn.d from sockconn.c make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/internet' gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c Rsock.c -o Rsock.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c internet.c -o internet.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c libcurl.c -o libcurl.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c sock.c -o sock.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -fvisibility=hidden -c sockconn.c -o sockconn.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o sock.o sockconn.o -lcurl -lR make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/internet' mkdir -p -- /builddir/build/BUILD/R-4.3.1/modules make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/internet' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/internet' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/internet' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/lapack' making Lapack.d from Lapack.c make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/lapack' gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Lapack.c -o Lapack.o gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../../main/flexiblas.c -o flexiblas.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o lapack.so Lapack.o flexiblas.o -lR -lflexiblas -lflexiblas -L -L -lgfortran -lm make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/lapack' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/lapack' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/lapack' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/lapack' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/X11' making devX11.d from devX11.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/X11' gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devX11.c -o devX11.o gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rotated.c -o rotated.o gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbitmap.c -o rbitmap.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lz -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dataentry.c -o dataentry.o gcc -shared -L"../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lXmu -lR -lm make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/X11' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/X11' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/X11' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/X11' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' mkdir -p -- ../../library make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/profile' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/translations' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/translations' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/translations' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/base' building package 'base' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/base' mkdir -p -- ../../../library/base/demo make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/base' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' mkdir -p -- ../../../library/tools/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tools/src' making text.d from text.c making init.d from init.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c making pdscan.d from pdscan.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c text.c -o text.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rmd5.c -o Rmd5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c md5.c -o md5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c signals.c -o signals.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c install.c -o install.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c getfmts.c -o getfmts.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c http.c -o http.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gramLatex.c -o gramLatex.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gramRd.c -o gramRd.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pdscan.c -o pdscan.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tools/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tools/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' installing 'sysdata.rda' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/compiler' mkdir -p -- ../../../library/compiler/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/compiler' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/compiler' byte-compiling package 'compiler' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/compiler' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/compiler' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/base' byte-compiling package 'base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/base' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' byte-compiling package 'tools' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tools' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' mkdir -p -- ../../../library/utils/R mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/utils/src' making init.d from init.c making io.d from io.c making size.d from size.c making sock.d from sock.c making stubs.d from stubs.c making utils.d from utils.c making hashtab.d from hashtab.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c io.c -o io.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c size.c -o size.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sock.c -o sock.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c utils.c -o utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c hashtab.c -o hashtab.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o utils.so init.o io.o size.o sock.o stubs.o utils.o hashtab.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/utils/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/utils/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' installing 'sysdata.rda' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' byte-compiling package 'utils' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/utils' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/fonts/Roboto mkdir -p -- ../../../library/grDevices/fonts/Montserrat/static mkdir -p -- ../../../library/grDevices/icc make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices' make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src' making axis_scales.d from axis_scales.c making chull.d from chull.c making devices.d from devices.c making init.d from init.c making stubs.d from stubs.c making colors.d from colors.c making clippath.d from clippath.c making patterns.d from patterns.c making mask.d from mask.c making group.d from group.c making devCairo.d from devCairo.c making devPicTeX.d from devPicTeX.c making devPS.d from devPS.c making devQuartz.d from devQuartz.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c axis_scales.c -o axis_scales.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chull.c -o chull.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devices.c -o devices.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c colors.c -o colors.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c patterns.c -o patterns.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c group.c -o group.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devCairo.c -o devCairo.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devPicTeX.c -o devPicTeX.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devPS.c -o devPS.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c devQuartz.c -o devQuartz.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o group.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[7]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src/cairo' making cairoBM.d from cairoBM.c make[8]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src/cairo' make[9]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src/cairo' gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/libxml2 -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../../../src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cairoBM.c -o cairoBM.o gcc -shared -L"../../../../../lib" -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lz -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lcairo -lpng16 -lz -L"../../../../../lib" -lR -lm make[9]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src/cairo' make[8]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src/cairo' make[7]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src/cairo' make[6]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices' byte-compiling package 'grDevices' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grDevices' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics' mkdir -p -- ../../../library/graphics/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics' make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics/src' making init.d from init.c making base.d from base.c making graphics.d from graphics.c making par.d from par.c making plot.d from plot.c making plot3d.d from plot3d.c making stem.d from stem.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c base.c -o base.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c graphics.c -o graphics.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c par.c -o par.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plot.c -o plot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plot3d.c -o plot3d.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stem.c -o stem.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics' byte-compiling package 'graphics' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/graphics' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/stats' mkdir -p -- ../../../library/stats/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/stats' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/stats' make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/stats/src' making init.d from init.c making kmeans.d from kmeans.c making ansari.d from ansari.c making bandwidths.d from bandwidths.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making line.d from line.c making smooth.d from smooth.c making prho.d from prho.c making swilk.d from swilk.c making ksmooth.d from ksmooth.c making loessc.d from loessc.c making monoSpl.d from monoSpl.c making isoreg.d from isoreg.c making Srunmed.d from Srunmed.c making dblcen.d from dblcen.c making distance.d from distance.c making hclust-utils.d from hclust-utils.c making nls.d from nls.c making rWishart.d from rWishart.c making HoltWinters.d from HoltWinters.c making PPsum.d from PPsum.c making arima.d from arima.c making burg.d from burg.c making filter.d from filter.c making mAR.d from mAR.c making pacf.d from pacf.c making starma.d from starma.c making port.d from port.c making family.d from family.c making sbart.d from sbart.c making approx.d from approx.c making loglin.d from loglin.c making lowess.d from lowess.c making massdist.d from massdist.c making splines.d from splines.c making lm.d from lm.c making complete_cases.d from complete_cases.c making cov.d from cov.c making deriv.d from deriv.c making fft.d from fft.c making fourier.d from fourier.c making model.d from model.c making optim.d from optim.c making optimize.d from optimize.c making integrate.d from integrate.c making random.d from random.c making distn.d from distn.c making zeroin.d from zeroin.c making rcont.d from rcont.c making influence.d from influence.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c kmeans.c -o kmeans.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ansari.c -o ansari.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bandwidths.c -o bandwidths.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chisqsim.c -o chisqsim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c d2x2xk.c -o d2x2xk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fexact.c -o fexact.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c kendall.c -o kendall.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ks.c -o ks.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c line.c -o line.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c smooth.c -o smooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c prho.c -o prho.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c swilk.c -o swilk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ksmooth.c -o ksmooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c loessc.c -o loessc.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c monoSpl.c -o monoSpl.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c isoreg.c -o isoreg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Srunmed.c -o Srunmed.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dblcen.c -o dblcen.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c distance.c -o distance.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c hclust-utils.c -o hclust-utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nls.c -o nls.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rWishart.c -o rWishart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c HoltWinters.c -o HoltWinters.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c PPsum.c -o PPsum.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c arima.c -o arima.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c burg.c -o burg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c filter.c -o filter.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mAR.c -o mAR.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pacf.c -o pacf.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c starma.c -o starma.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c port.c -o port.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c family.c -o family.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sbart.c -o sbart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c approx.c -o approx.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c loglin.c -o loglin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lowess.c -o lowess.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c massdist.c -o massdist.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c splines.c -o splines.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lm.c -o lm.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c complete_cases.c -o complete_cases.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cov.c -o cov.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c deriv.c -o deriv.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fft.c -o fft.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fourier.c -o fourier.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c model.c -o model.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c optim.c -o optim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c optimize.c -o optimize.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c integrate.c -o integrate.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c random.c -o random.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c distn.c -o distn.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c zeroin.c -o zeroin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rcont.c -o rcont.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c influence.c -o influence.o gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c bsplvd.f -o bsplvd.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: bsplvd.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c bvalue.f -o bvalue.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: bvalue.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c bvalus.f -o bvalus.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: bvalus.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c loessf.f -o loessf.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: loessf.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c ppr.f -o ppr.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: ppr.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c qsbart.f -o qsbart.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: qsbart.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sgram.f -o sgram.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: sgram.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sinerp.f -o sinerp.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: sinerp.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sslvrg.f -o sslvrg.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: sslvrg.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c stxwx.f -o stxwx.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: stxwx.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c hclust.f -o hclust.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: hclust.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c kmns.f -o kmns.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: kmns.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c eureka.f -o eureka.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: eureka.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c stl.f -o stl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: stl.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c portsrc.f -o portsrc.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: portsrc.f: Warning: -D_GLIBCXX_ASSERTIONS not defined portsrc.f: In function 'i7do_': portsrc.f:6574:44: warning: 'jcol' may be used uninitialized [-Wmaybe-uninitialized] 6574 | INTEGER DEG,HEAD,IC,IP,IPL,IPU,IR,JCOL,JP,JPL,JPU,L,MAXINC, | ^ portsrc.f: In function 'dl7mst_': portsrc.f:5658:18: warning: 'psifac' may be used uninitialized [-Wmaybe-uninitialized] 5658 | IF (ALPHAK .GE. TWOPSI*PSIFAC) GO TO 310 | ^ portsrc.f:5378:62: note: 'psifac' was declared here 5378 | 1 LK, OLDPHI, PHI, PHIMAX, PHIMIN, PSIFAC, RAD, | ^ portsrc.f:5521:51: warning: 'alphak' may be used uninitialized [-Wmaybe-uninitialized] 5521 | IF (ALPHAK .LE. ZERO .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) | ^ portsrc.f:5377:37: note: 'alphak' was declared here 5377 | DOUBLE PRECISION A, ADI, ALPHAK, B, DFACSQ, DST, DTOL, D1, D2, | ^ portsrc.f: In function 'dg7qts_': portsrc.f:10324:72: warning: 'phi' may be used uninitialized [-Wmaybe-uninitialized] 10324 | LK = DMAX1(LK, PHI*W(PHIPIN)) | ^ portsrc.f:10077:34: note: 'phi' was declared here 10077 | 1 OLDPHI, PHI, PHIMAX, PHIMIN, PSIFAC, RAD, RADSQ, | ^ portsrc.f:10466:10: warning: 'kamin' may be used uninitialized [-Wmaybe-uninitialized] 10466 | IF (KA .GE. KAMIN) GO TO 340 | ^ portsrc.f:10075:32: note: 'kamin' was declared here 10075 | 1 J, K, KALIM, KAMIN, K1, LK0, PHIPIN, Q, Q0, UK0, X | ^ portsrc.f:10329:55: warning: 'alphak' may be used uninitialized [-Wmaybe-uninitialized] 10329 | IF (-V(DST0) .GE. ALPHAK .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) | ^ portsrc.f:10076:29: note: 'alphak' was declared here 10076 | DOUBLE PRECISION ALPHAK, AKI, AKK, DELTA, DST, EPS, GTSTA, LK, | ^ portsrc.f: In function 'dd7dgb_': portsrc.f:12246:72: warning: 'dnwtst' may be used uninitialized [-Wmaybe-uninitialized] 12246 | V(DST0) = DNWTST | ^ portsrc.f:12105:29: note: 'dnwtst' was declared here 12105 | DOUBLE PRECISION DNWTST, GHINVG, GNORM, GNORM0, NRED, PRED, RAD, | ^ portsrc.f:12243:72: warning: 'nred' may be used uninitialized [-Wmaybe-uninitialized] 12243 | V(NREDUC) = NRED | ^ portsrc.f:12105:58: note: 'nred' was declared here 12105 | DOUBLE PRECISION DNWTST, GHINVG, GNORM, GNORM0, NRED, PRED, RAD, | ^ portsrc.f: In function 'dg7qsb_': portsrc.f:2514:72: warning: 'ds0' may be used uninitialized [-Wmaybe-uninitialized] 2514 | 60 V(DST0) = DS0 | ^ portsrc.f:2457:26: note: 'ds0' was declared here 2457 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ portsrc.f:2515:72: warning: 'nred' may be used uninitialized [-Wmaybe-uninitialized] 2515 | V(NREDUC) = NRED | ^ portsrc.f:2457:32: note: 'nred' was declared here 2457 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ portsrc.f: In function 'dl7msb_': portsrc.f:8173:72: warning: 'ds0' may be used uninitialized [-Wmaybe-uninitialized] 8173 | 90 V(DST0) = DS0 | ^ portsrc.f:8086:26: note: 'ds0' was declared here 8086 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ portsrc.f:8174:72: warning: 'nred' may be used uninitialized [-Wmaybe-uninitialized] 8174 | V(NREDUC) = NRED | ^ portsrc.f:8086:32: note: 'nred' was declared here 8086 | DOUBLE PRECISION DS0, NRED, PRED, RAD | ^ portsrc.f: In function 'df7hes_': portsrc.f:8652:72: warning: 'hes' may be used uninitialized [-Wmaybe-uninitialized] 8652 | 210 IV(FDH) = HES | ^ portsrc.f:8450:25: note: 'hes' was declared here 8450 | INTEGER GSAVE1, HES, HMI, HPI, HPM, I, K, KIND, L, M, MM1, MM1O2, | ^ portsrc.f: In function 'dparck_': portsrc.f:3587:10: warning: 'miv2' may be used uninitialized [-Wmaybe-uninitialized] 3587 | IF (LIV .LT. MIV2) GO TO 300 | ^ portsrc.f:3520:54: note: 'miv2' was declared here 3520 | INTEGER ALG1, I, II, IV1, J, K, L, M, MIV1, MIV2, NDFALT, PARSV1, | ^ portsrc.f: In function 'drn2gb_': portsrc.f:12079:72: warning: 'g1' may be used uninitialized [-Wmaybe-uninitialized] 12079 | 270 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) | ^ portsrc.f:11822:16: note: 'g1' was declared here 11822 | INTEGER G1, GI, I, IV1, IVMODE, JTOL1, L, LH, NN, QTR1, | ^ portsrc.f: In function 'drn2g_': portsrc.f:458:72: warning: 'g1' may be used uninitialized [-Wmaybe-uninitialized] 458 | 300 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) | ^ portsrc.f:157:16: note: 'g1' was declared here 157 | INTEGER G1, GI, I, IV1, IVMODE, JTOL1, K, L, LH, NN, QTR1, | ^ gfortran -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c lminfl.f -o lminfl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: lminfl.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -lflexiblas -lflexiblas -L -L -lgfortran -lm -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/stats/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/stats/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/stats' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/stats' byte-compiling package 'stats' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/stats' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/stats' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/datasets' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/datasets' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/methods' mkdir -p -- ../../../library/methods/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/methods' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/methods' make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/methods/src' making do_substitute_direct.d from do_substitute_direct.c making init.d from init.c making methods_list_dispatch.d from methods_list_dispatch.c making slot.d from slot.c making class_support.d from class_support.c making tests.d from tests.c making utils.d from utils.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c do_substitute_direct.c -o do_substitute_direct.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c methods_list_dispatch.c -o methods_list_dispatch.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c slot.c -o slot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c class_support.c -o class_support.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tests.c -o tests.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c utils.c -o utils.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/methods/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/methods/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/methods' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/methods' byte-compiling package 'methods' initializing class and method definitions ... done make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/methods' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/methods' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grid' mkdir -p -- ../../../library/grid/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grid' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grid' make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grid/src' making clippath.d from clippath.c making gpar.d from gpar.c making grid.d from grid.c making just.d from just.c making layout.d from layout.c making mask.d from mask.c making matrix.d from matrix.c making path.d from path.c making register.d from register.c making state.d from state.c making typeset.d from typeset.c making unit.d from unit.c making util.d from util.c making viewport.d from viewport.c gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gpar.c -o gpar.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c grid.c -o grid.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c just.c -o just.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c layout.c -o layout.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c matrix.c -o matrix.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c path.c -o path.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c register.c -o register.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c state.c -o state.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c typeset.c -o typeset.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c unit.c -o unit.o unit.c: In function 'summaryUnits': unit.c:1969:37: warning: 'first_type' may be used uninitialized [-Wmaybe-uninitialized] 1969 | (j == 0 || | ~~~~~~~~^~ 1970 | (current_type == first_type && | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1971 | R_compute_identical(uData(unit_temp), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1972 | first_data, 15))); | ~~~~~~~~~~~~~~~~~ unit.c:1957:21: note: 'first_type' was declared here 1957 | int first_type, current_type; | ^~~~~~~~~~ unit.c:1971:31: warning: 'first_data' may be used uninitialized [-Wmaybe-uninitialized] 1971 | R_compute_identical(uData(unit_temp), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1972 | first_data, 15))); | ~~~~~~~~~~~~~~~ unit.c:1959:22: note: 'first_data' was declared here 1959 | SEXP first_data; | ^~~~~~~~~~ gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c util.c -o util.o gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c viewport.c -o viewport.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o path.o register.o state.o typeset.o unit.o util.o viewport.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grid/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grid/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grid' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/grid' byte-compiling package 'grid' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grid' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/grid' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/splines' mkdir -p -- ../../../library/splines/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/splines' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/splines' make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/splines/src' making splines.d from splines.c gcc -I"../../../../include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c splines.c -o splines.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o splines.so splines.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/splines/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/splines/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/splines' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/splines' byte-compiling package 'splines' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/splines' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/splines' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/stats4' mkdir -p -- ../../../library/stats4/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/stats4' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/stats4' byte-compiling package 'stats4' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/stats4' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/stats4' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk' mkdir -p -- ../../../library/tcltk/exec make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk/src' making init.d from init.c making tcltk.d from tcltk.c making tcltk_unix.d from tcltk_unix.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tcltk.c -o tcltk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tcltk_unix.c -o tcltk_unix.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib64 -ltcl8.6 -L/usr/lib64 -ltk8.6 -lX11 -lm -L../../../../lib -lR make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk/src' mkdir -p -- ../../../../library/tcltk/libs make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk/src' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk' byte-compiling package 'tcltk' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/tcltk' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel' mkdir -p -- ../../../library/parallel/R make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel' make[5]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel/src' making init.d from init.c making rngstream.d from rngstream.c making fork.d from fork.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rngstream.c -o rngstream.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fork.c -o fork.o gcc -shared -L../../../../lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[6]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[6]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel/src' make[5]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel/src' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel' make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel' byte-compiling package 'parallel' make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/parallel' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/base' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/base' installing parsed NAMESPACE files make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' you should 'make docs' now ... make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc' creating doc/NEWS creating doc/NEWS.pdf make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/manual' creating doc/manual/R-FAQ.html creating doc/manual/version.texi creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/html' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/html' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' installing parsed Rd make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' base stats utils methods graphics grDevices datasets grid tools tcltk splines stats4 compiler parallel make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' building/updating package metadata ... make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' writing package indices make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' building all R object docs converting help for package 'base' Arithmetic html AsIs html Bessel html CallExternal html Colon html Comparison html Constants html Control html Cstack_info html DateTimeClasses html Dates html Defunct html Deprecated html Encoding html EnvVar html Extract html Extract.data.frame html Extract.factor html Extremes html Foreign-internal html Foreign html Hyperbolic html ISOdatetime html Internal html InternalMethods html La_library html La_version html Last.value html Log html Logic html LongVectors html MathFun html Memory-limits html Memory html NA html NULL html NumericConstants html Ops.Date html Paren html Platform html Primitive html Quotes html Random-user html Random html RdUtils html Recall html Reserved html Rhome html Round html S3method html Special html StackOverflows html Startup html Syntax html Sys.getenv html Sys.getpid html Sys.glob html Sys.info html Sys.localeconv html Sys.readlink html Sys.setFileTime html Sys.setenv html Sys.sleep html Sys.time html Sys.which html Trig html UTF8filepaths html UseMethod html Vectorize html Version html abbreviate html agrep html all html all.equal html allnames html any html aperm html append html apply html args html array html array2DF html as.Date html as.POSIXlt html as.data.frame html as.environment html as.function html asplit html assign html assignOps html attach html attr html attributes html autoload html backsolve html balancePOSIXlt html base-defunct html REDIRECT:topic Previous alias or file overwritten by alias: ../../library/base/help/Version.html REDIRECT:topic Previous alias or file overwritten by alias: ../../library/base/help/Platform.html base-deprecated html base-internal html base-package html basename html bincode html bindenv html bitwise html body html bquote html browser html browserText html builtins html by html c html call html callCC html capabilities html cat html cbind html char.expand html character html charmatch html chartr html chkDots html chol html chol2inv html chooseOpsMethod html class html col html colSums html colnames html commandArgs html comment html complex html conditions html conflicts html connections html contributors html copyright html crossprod html cumsum html curlGetHeaders html cut.POSIXt html cut html data.class html data.frame html data.matrix html dataframeHelpers html date html dcf html debug html delayedAssign html deparse html deparseOpts html det html detach html dev html diag html diff html difftime html dim html dimnames html do.call html dontCheck html dots html double html dput html drop html droplevels html dump html duplicated html dynload html eapply html eigen html encodeString html environment html eval html exists html expand.grid html expression html extSoftVersion html factor html file.access html file.choose html file.info html file.path html file.show html files html files2 html find.package html findInterval html force html forceAndCall html formals html format html format.info html format.pval html formatDL html formatc html function html funprog html gc html gc.time html gctorture html get html getCallingDLL html getDLLRegisteredRoutines html getLoadedDLLs html getNativeSymbolInfo html gettext html getwd html gl html grep html grepRaw html groupGeneric html grouping html gzcon html hexmode html iconv html icuSetCollate html identical html identity html ifelse html integer html interaction html interactive html invisible html is.finite html is.function html is.language html is.object html is.recursive html is.single html is.unsorted html isR html isS4 html isSymmetric html jitter html kappa html kronecker html l10n_info html labels html lapply html lazyload html length html lengths html levels html libPaths html libcurlVersion html library html library.dynam html license html list html list.files html list2DF html list2env html load html locales html logical html lower.tri html ls html make.names html make.unique html mapply html marginSums html mat.or.vec html match html match.arg html match.call html match.fun html matmult html matrix html maxCol html mean html memCompress html memlimits html memory.profile html merge html message html missing html mode html mtfrm html name html names html nargs html nchar html nlevels html noquote html norm html normalizePath html notyet html nrow html ns-dblcolon html ns-hooks html ns-internal html ns-load html ns-reflect html ns-topenv html numeric html numeric_version html octmode html on.exit html options html order html outer html parse html paste html path.expand html pcre_config html pipeOp html plot html pmatch html polyroot html pos.to.env html pretty html print html print.dataframe html print.default html prmatrix html proc.time html prod html proportions html pushBack html qr html qraux html quit html range html rank html rapply html raw html rawConnection html rawConversion html readBin html readChar html readLines html readRDS html readRenviron html readline html reg.finalizer html regex html regmatches html rep html replace html rev html rle html rm html round.POSIXt html row html row.names html rowsum html sQuote html sample html save html scale html scan html search html seek html seq.Date html seq.POSIXt html seq html sequence html serialize html setTimeLimit html sets html shQuote html showConnections html sign html sink html slice.index html slotOp html socketSelect html solve html sort html source html split html sprintf html srcfile html standardGeneric html startsWith html stop html stopifnot html strptime html strrep html strsplit html strtoi html strtrim html structure html strwrap html subset html substitute html substr html sum html summary html svd html sweep html switch html sys.parent html sys.source html system html system.file html system.time html system2 html t html table html tabulate html tapply html taskCallback html taskCallbackManager html taskCallbackNames html tempfile html textconnections html tilde html timezones html toString html trace html traceback html tracemem html transform html trimws html try html typeof html unique html units html unlink html unlist html unname html userhooks html utf8Conversion html validUTF8 html vector html warning html warnings html weekday.POSIXt html which html which.min html with html withVisible html write html writeLines html xtfrm html zMachine html zScript html zapsmall html zpackages html zutils html Signals html converting help for package 'tools' CRANtools html HTMLheader html HTMLlinks html QC html Rcmd html Rd2HTML html Rd2txt_options html RdTextFilter html Rdiff html Rdindex html Rdutils html SweaveTeXFilter html add_datalist html assertCondition html bibstyle html buildVignette html buildVignettes html charsets html checkFF html checkMD5sums html checkPoFiles html checkRd html checkRdaFiles html checkTnF html checkVignettes html check_packages_in_dir html codoc html compactPDF html delimMatch html dependsOnPkgs html encoded html fileutils html find_gs_cmd html getVignetteInfo html loadRdMacros html makeLazyLoading html make_translations_pkg html makevars html matchConcordance html md5sum html package_dependencies html package_native_routine_registration_skeleton html parseLatex html parse_Rd html print.via.format html pskill html psnice html read.00Index html showNonASCII html startDynamicHelp html testInstalledPackage html texi2dvi html toHTML html toRd html toTitleCase html tools-defunct html tools-deprecated html tools-package html undoc html updatePACKAGES html update_pkg_po html userdir html vignetteEngine html vignetteInfo html writePACKAGES html xgettext html converting help for package 'utils' BATCH html COMPILE html DLL.version html INSTALL html LINK html PkgUtils html Question html REMOVE html RHOME html RShowDoc html RSiteSearch html Rconsole html Rprof html Rprofmem html Rscript html Rtangle html RweaveLatex html SHLIB html Sweave html SweaveSyntConv html SweaveUtils html URLencode html View html adist html alarm html apropos html aregexec html arrangeWindows html askYesNo html aspell-utils html aspell html available.packages html bibentry html browseEnv html browseURL html browseVignettes html bug.report html capture.output html changedFiles html charClass html choose.dir html choose.files html chooseBioCmirror html chooseCRANmirror html citEntry html citation html cite html clipboard html close.socket html combn html compareVersion html contrib.url html count.fields html create.post html data html dataentry html debugcall html debugger html demo html download.file html download.packages html edit html edit.data.frame html example html file.edit html filetest html findCRANmirror html findLineNum html fix html flush.console html format html getAnywhere html getFromNamespace html getParseData html getS3method html getWindowsHandle html getWindowsHandles html glob2rx html globalVariables html hasName html hashtab html head html help html help.request html help.search html help.start html hsearch-utils html install.packages html installed.packages html isS3method html isS3stdGen html localeToCharset html ls_str html maintainer html make.packages.html html make.socket html memory.size html menu html methods html mirrorAdmin html modifyList html news html nsl html object.size html package.skeleton html packageDescription html packageName html packageStatus html page html person html personList html process.events html prompt html promptData html promptPackage html rcompgen html read.DIF html read.fortran html read.fwf html read.socket html read.table html readRegistry html recover html relist html remove.packages html removeSource html roman html rtags html savehistory html select.list html sessionInfo html setRepositories html setWindowTitle html shortPathName html sourceutils html stack html str html strcapture html summaryRprof html tar html toLatex html txtProgressBar html type.convert html untar html unzip html update.packages html upgrade html url.show html utils-defunct html utils-deprecated html utils-internal html utils-package html vignette html warnErrList html winDialog html winMenus html winProgressBar html winextras html write.table html zip html converting help for package 'grDevices' Devices html Hershey html Japanese html Type1Font html adjustcolor html as.graphicsAnnot html as.raster html axisTicks html boxplot.stats html bringToTop html cairo html cairoSymbolFont html check.options html chull html cm html col2rgb html colorRamp html colors html contourLines html convertColor html densCols html dev html dev.capabilities html dev.capture html dev.flush html dev.interactive html dev.size html dev2 html dev2bitmap html devAskNewPage html embedFonts html extendrange html getGraphicsEvent html glyphInfo html grDevices-internal html grDevices-package html grSoftVersion html gray html gray.colors html hcl html hsv html make.rgb html msgWindow html n2mfrow html nclass html palette html palettes html pdf html pdf.options html pictex html plotmath html postscript html postscriptFonts html pretty.Date html ps.options html quartz html quartzFonts html recordGraphics html recordplot html rgb html rgb2hsv html trans3d html windows html windows.options html windowsFonts html x11 html x11Fonts html xfig html xy.coords html xyTable html xyz.coords html png html savePlot html converting help for package 'graphics' abline html arrows html assocplot html axTicks html axis.POSIXct html axis html barplot html box html boxplot html boxplot.matrix html bxp html cdplot html clip html contour html convertXY html coplot html curve html dotchart html filled.contour html fourfoldplot html frame html graphics-defunct html graphics-package html grid html hist.POSIXt html hist html identify html image html layout html legend html lines html locator html matplot html mosaicplot html mtext html pairs html panel.smooth html par html persp html pie html plot.dataframe html plot.default html plot.design html plot.factor html plot.formula html plot.raster html plot.table html plot.window html plot.xy html plothistogram html points html polygon html polypath html rasterImage html rect html rug html screen html segments html smoothScatter html spineplot html stars html stem html stripchart html strwidth html sunflowerplot html symbols html text html title html units html xspline html zAxis html converting help for package 'stats' AIC html ARMAacf html ARMAtoMA html Beta html Binomial html Cauchy html Chisquare html Distributions html Exponential html Fdist html GammaDist html Geometric html HoltWinters html Hypergeometric html IQR html KalmanLike html Logistic html Lognormal html Multinom html NLSstAsymptotic html NLSstClosestX html NLSstLfAsymptote html NLSstRtAsymptote html NegBinomial html Normal html Pair html Poisson html SSD html SSasymp html SSasympOff html SSasympOrig html SSbiexp html SSfol html SSfpl html SSgompertz html SSlogis html SSmicmen html SSweibull html SignRank html Smirnov html StructTS html TDist html Tukey html TukeyHSD html Uniform html Weibull html Wilcoxon html acf html acf2AR html add1 html addmargins html aggregate html alias html anova html anova.glm html anova.lm html anova.mlm html ansari.test html aov html approxfun html ar html ar.ols html arima html arima.sim html arima0 html as.hclust html asOneSidedFormula html ave html bandwidth html bartlett.test html binom.test html biplot html biplot.princomp html birthday html box.test html cancor html case.names html checkMFClasses html chisq.test html cmdscale html coef html complete.cases html confint html constrOptim html contrast html contrasts html convolve html cophenetic html cor html cor.test html cov.wt html cpgram html cutree html decompose html delete.response html dendrapply html dendrogram html density html deriv html deviance html df.residual html diffinv html dist html dummy.coef html ecdf html eff.aovlist html effects html embed html expand.model.frame html extractAIC html factanal html factor.scope html family html fft html filter html fisher.test html fitted.values html fivenum html fligner.test html formula html formula.nls html friedman.test html ftable html ftable.formula html getInitial html glm html glm.control html glm.summaries html hclust html heatmap html identify.hclust html influence.measures html integrate html interaction.plot html is.empty html isoreg html kernapply html kernel html kmeans html kruskal.test html ks.test html ksmooth html lag html lag.plot html line html listof html lm html lm.influence html lm.summaries html lmfit html loadings html loess html loess.control html logLik html loglin html lowess html ls.diag html ls.print html lsfit html mad html mahalanobis html make.link html makepredictcall html manova html mantelhaen.test html mauchly.test html mcnemar.test html median html medpolish html model.extract html model.frame html model.matrix html model.tables html monthplot html mood.test html na.action html na.contiguous html na.fail html nafns html naprint html nextn html nlm html nlminb html nls html nls.control html nobs html numericDeriv html offset html oneway.test html optim html optimize html order.dendrogram html p.adjust html pairwise.prop.test html pairwise.t.test html pairwise.table html pairwise.wilcox.test html plot.HoltWinters html plot.acf html plot.density html plot.isoreg html plot.lm html plot.ppr html plot.profile.nls html plot.spec html plot.stepfun html plot.ts html poisson.test html poly html power html power.anova.test html power.prop.test html power.t.test html pp.test html ppoints html ppr html prcomp html predict.HoltWinters html predict html predict.arima html predict.glm html predict.lm html predict.loess html predict.nls html predict.smooth.spline html preplot html princomp html print.power.htest html print.ts html printCoefmat html profile html profile.nls html proj html prop.test html prop.trend.test html qqnorm html quade.test html quantile html r2dtable html rWishart html read.ftable html rect.hclust html relevel html reorder.dendrogram html reorder.factor html replications html reshape html residuals html runmed html scatter.smooth html screeplot html sd html se.contrast html selfStart html setNames html shapiro.test html sigma html simulate html smooth html smooth.spline html smoothEnds html sortedXyData html spec.ar html spec.pgram html spec.taper html spectrum html splinefun html start html stat.anova html stats-defunct html stats-deprecated html stats-package html step html stepfun html stl html stlmethods html summary.aov html summary.glm html summary.lm html summary.manova html summary.nls html summary.princomp html supsmu html symnum html t.test html termplot html terms html terms.formula html terms.object html time html toeplitz html ts-methods html ts html ts.plot html ts.union html tsSmooth html tsdiag html tsp html uniroot html update html update.formula html var.test html varimax html vcov html weighted.mean html weighted.residuals html weights html wilcox.test html window html xtabs html zC html converting help for package 'datasets' AirPassengers html BJsales html BOD html ChickWeight html DNase html EuStockMarkets html Formaldehyde html HairEyeColor html Harman23.cor html Harman74.cor html Indometh html InsectSprays html JohnsonJohnson html LakeHuron html LifeCycleSavings html Loblolly html Nile html Orange html OrchardSprays html PlantGrowth html Puromycin html Theoph html Titanic html ToothGrowth html UCBAdmissions html UKDriverDeaths html UKLungDeaths html UKgas html USAccDeaths html USArrests html USJudgeRatings html USPersonalExpenditure html VADeaths html WWWusage html WorldPhones html ability.cov html airmiles html airquality html anscombe html attenu html attitude html austres html beavers html cars html chickwts html co2 html crimtab html datasets-package html discoveries html esoph html euro html eurodist html faithful html freeny html infert html iris html islands html lh html longley html lynx html morley html mtcars html nhtemp html nottem html npk html occupationalStatus html precip html presidents html pressure html quakes html randu html rivers html rock html sleep html stackloss html state html sunspot.month html sunspot.year html sunspots html swiss html treering html trees html uspop html volcano html warpbreaks html women html zCO2 html converting help for package 'methods' BasicClasses html Classes html Classes_Details html Documentation html EmptyMethodsList-class html EnvironmentClass html GenericFunctions html Introduction html LanguageClasses html LinearMethodsList-class html MethodDefinition-class html MethodSupport html MethodWithNext-class html Methods html MethodsList-class html MethodsList html Methods_Details html Methods_for_Nongenerics html Methods_for_S3 html NextMethod html ObjectsWithPackage-class html RClassUtils html RMethodUtils html S3Part html S4groupGeneric html SClassExtension-class html StructureClasses html TraceClasses html as html callGeneric html canCoerce html cbind2 html className html classRepresentation-class html classesToAM html dotsMethods html evalSource html findClass html findMethods html fixPrevious html genericFunction-class html getClass html getMethod html getPackageName html hasArg html implicitGeneric html inheritedSlotNames html initialize-methods html is html isSealedMethod html languageEl html localRefClass html method.skeleton html methodUtilities html methods-defunct html methods-deprecated html methods-package html new html nonStructure-class html promptClass html promptMethods html refClass html removeMethod html representation html selectSuperClasses html setAs html setClass html setClassUnion html setGeneric html setGroupGeneric html setIs html setLoadActions html setMethod html setOldClass html setSClass html show html showMethods html signature-class html slot html stdRefClass html substituteDirect html testInheritedMethods html validObject html zBasicFunsList html converting help for package 'grid' Grid html absolute.size html arrow html as.mask html calcStringMetric html current.viewport html dataViewport html depth html deviceLoc html drawDetails html editDetails html editViewport html explode html gEdit html gPath html getNames html gpar html grid-defunct html grid-internal html grid-package html grid.DLapply html grid.add html grid.bezier html grid.cap html grid.circle html grid.clip html grid.convert html grid.copy html grid.curve html grid.delay html grid.display.list html grid.draw html grid.edit html grid.force html grid.frame html grid.function html grid.get html grid.glyph html grid.grab html grid.grep html grid.grill html grid.grob html grid.group html grid.layout html grid.lines html grid.locator html grid.ls html grid.move.to html grid.newpage html grid.null html grid.pack html grid.path html grid.place html grid.plot.and.legend html grid.points html grid.polygon html grid.pretty html grid.raster html grid.record html grid.rect html grid.refresh html grid.remove html grid.reorder html grid.roundrect html grid.segments html grid.set html grid.show.layout html grid.show.viewport html grid.stroke html grid.text html grid.xaxis html grid.xspline html grid.yaxis html gridCoords html grobCoords html grobName html grobWidth html grobX html legendGrob html makeContent html patterns html plotViewport html resolveRasterSize html showGrob html showViewport html stringWidth html unit html unit.c html unit.length html unit.pmin html unit.rep html unitType html valid.just html validDetails html viewport html viewportTransform html viewports html vpPath html widthDetails html xDetails html xsplinePoints html converting help for package 'splines' asVector html backSpline html bs html interpSpline html ns html periodicSpline html polySpline html predict.bSpline html predict.bs html splineDesign html splineKnots html splineOrder html splines-package html xyVector html converting help for package 'stats4' coef-methods html confint-methods html logLik-methods html mle-class html mle html plot-methods html profile-methods html profile.mle-class html show-methods html stats4-package html summary-methods html summary.mle-class html update-methods html vcov-methods html converting help for package 'tcltk' TclInterface html TkCommands html TkWidgetcmds html TkWidgets html tclServiceMode html tcltk-defunct html tcltk-package html tkProgressBar html tkStartGUI html tk_choose.dir html tk_choose.files html tk_messageBox html tk_select.list html tkpager html converting help for package 'compiler' compile html converting help for package 'parallel' RngStream html clusterApply html detectCores html makeCluster html parallel-package html splitIndices html children html mcaffinity html mcfork html mclapply html mcparallel html pvec html make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/Recommended' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library/Recommended' begin installing recommended package MASS * installing *source* package 'MASS' ... ** package 'MASS' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/RtmppYYifa/R.INSTALL2c7dd7241e1b07/MASS/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c MASS.c -o MASS.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lqs.c -o lqs.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o MASS.so MASS.o lqs.o -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/RtmppYYifa/R.INSTALL2c7dd7241e1b07/MASS/src' installing to /builddir/build/BUILD/R-4.3.1/library/MASS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'MASS' finding HTML links ... done Aids2 html Animals html Boston html Cars93 html Cushings html DDT html GAGurine html Insurance html MASS-internal html Melanoma html Null html OME html Pima.tr html Rabbit html Rubber html SP500 html Sitka html Sitka89 html Skye html Traffic html UScereal html UScrime html VA html abbey html accdeaths html addterm html anorexia html anova.negbin html area html bacteria html bandwidth.nrd html bcv html beav1 html beav2 html biopsy html birthwt html boxcox html cabbages html caith html cats html cement html chem html con2tr html confint html contr.sdif html coop html corresp html cov.rob html cov.trob html cpus html crabs html deaths html denumerate html dose.p html drivers html dropterm html eagles html epil html eqscplot html farms html fgl html fitdistr html forbes html fractions html galaxies html gamma.dispersion html gamma.shape.glm html gehan html genotype html geyser html gilgais html ginv html glm.convert html glm.nb html glmmPQL html hills html hist.scott html housing html huber html hubers html immer html isoMDS html kde2d html lda html ldahist html leuk html lm.gls html lm.ridge html loglm html loglm1 html logtrans html lqs html mammals html mca html mcycle html menarche html michelson html minn38 html motors html muscle html mvrnorm html negative.binomial html newcomb html nlschools html npk html npr1 html oats html painters html pairs.lda html parcoord html petrol html phones html plot.lda html plot.mca html plot.profile html polr html predict.glmmPQL html predict.lda html predict.lqs html predict.mca html predict.qda html profile.glm html qda html quine html rational html renumerate html rlm html rms.curv html rnegbin html road html rotifer html sammon html ships html shoes html shrimp html shuttle html snails html stdres html steam html stepAIC html stormer html studres html summary.loglm html summary.negbin html summary.rlm html survey html synth.tr html theta.md html topo html truehist html ucv html waders html whiteside html width.SJ html write.matrix html wtloss html ** building package indices ** testing if installed package can be loaded * DONE (MASS) Making 'packages.html' ... done begin installing recommended package lattice * installing *source* package 'lattice' ... ** package 'lattice' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/RtmpDRgXzA/R.INSTALL2c7e147c41bb21/lattice/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c threeDplot.c -o threeDplot.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o lattice.so init.o threeDplot.o -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/RtmpDRgXzA/R.INSTALL2c7e147c41bb21/lattice/src' installing to /builddir/build/BUILD/R-4.3.1/library/lattice/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'lattice' finding HTML links ... done Lattice html Rows html USMortality html axis.default html banking html barchart.table html barley html cloud html draw.colorkey html draw.key html environmental html ethanol html histogram html interaction html lattice.options html latticeParseFormula html level.colors html levelplot html llines html lset html make.groups html melanoma html oneway html packet.panel.default html panel.axis html panel.barchart html panel.bwplot html panel.cloud html panel.densityplot html panel.dotplot html panel.functions html panel.histogram html panel.levelplot html panel.loess html panel.number html panel.pairs html panel.parallel html panel.qqmath html panel.qqmathline html panel.smoothScatter html panel.spline html panel.stripplot html panel.superpose html panel.violin html panel.xyplot html prepanel.default html prepanel.functions html print.trellis html qq html qqmath html rfs html shingles html simpleKey html simpleTheme html singer html splom html standard.theme html strip.default html tmd html trellis.device html trellis.object html trellis.par.get html update.trellis html utilities.3d html xyplot html xyplot.ts html ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (lattice) Making 'packages.html' ... done begin installing recommended package Matrix * installing *source* package 'Matrix' ... ** package 'Matrix' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c CHMfactor.c -o CHMfactor.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Csparse.c -o Csparse.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Mutils.c -o Mutils.o Mutils.c: In function 'Mmatrix': Mutils.c:1337:28: warning: missing braces around initializer [-Wmissing-braces] 1337 | Rcomplex zna = { NA_REAL, 0.0 }; | ^ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chm_common.c -o chm_common.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cs.c -o cs.o cs.c: In function 'cs_realloc': cs.c:1161:26: warning: pointer 'p_11(D)' may be used after 'realloc' [-Wuse-after-free] 1161 | return ((*ok) ? pnew : p) ; /* return original p if failure */ | ~~~~~~~~~~~~~~^~~~ cs.c:1159:12: note: call to 'realloc' here 1159 | pnew = realloc (p, CS_MAX (n,1) * size) ; /* realloc the block */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cs_utils.c -o cs_utils.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dense.c -o dense.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgCMatrix.c -o dgCMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgeMatrix.c -o dgeMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dpoMatrix.c -o dpoMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dppMatrix.c -o dppMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dsCMatrix.c -o dsCMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dsyMatrix.c -o dsyMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dspMatrix.c -o dspMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dtCMatrix.c -o dtCMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dtrMatrix.c -o dtrMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dtpMatrix.c -o dtpMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c factorizations.c -o factorizations.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sparseQR.c -o sparseQR.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sparseVector.c -o sparseVector.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c abIndex.c -o abIndex.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c packedMatrix.c -o packedMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c unpackedMatrix.c -o unpackedMatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sparse.c -o sparse.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c subscript.c -o subscript.o subscript.c: In function 'RsparseMatrix_subscript_2ary': subscript.c:1689:33: warning: variable 'doSort' set but not used [-Wunused-but-set-variable] 1689 | int i_, j_, j_prev = n, doSort = 0; | ^~~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c validity.c -o validity.o make[4]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/CHOLMOD' ( cd Lib ; make clean ) make[5]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/CHOLMOD/Lib' make[5]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/CHOLMOD' make[4]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/COLAMD' ( cd Source ; make clean ) make[5]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/COLAMD/Source' make[5]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/COLAMD' make[4]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/AMD' ( cd Source ; make clean ) make[5]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/AMD/Source' make[5]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/AMD/Source' make[4]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/AMD' make[4]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/SuiteSparse_config' make[4]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/SuiteSparse_config' make[4]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/CHOLMOD' ( cd Lib ; make -f "/builddir/build/BUILD/R-4.3.1/etc/Makeconf" -f Makefile ) make[5]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/CHOLMOD/Lib' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_aat.c -o cholmod_aat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_add.c -o cholmod_add.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_band.c -o cholmod_band.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o In file included from ../Core/cholmod_change_factor.c:113: ../Core/t_cholmod_change_factor.c: In function 'r_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ In file included from ../Core/cholmod_change_factor.c:115: ../Core/t_cholmod_change_factor.c: In function 'c_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'simplicial_symbolic_to_super_symbolic': ../Core/cholmod_change_factor.c:262:17: warning: variable 'xsize' set but not used [-Wunused-but-set-variable] 262 | Int nsuper, xsize, ssize ; | ^~~~~ ../Core/cholmod_change_factor.c: In function 'change_simplicial_numeric': ../Core/cholmod_change_factor.c:677:15: warning: variable 'Li' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:677:10: warning: variable 'Lp' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:676:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c:676:13: warning: variable 'Lx' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'll_super_to_simplicial_numeric': ../Core/cholmod_change_factor.c:824:9: warning: variable 'n' set but not used [-Wunused-but-set-variable] 824 | Int n, lnz, s, nsuper, psi, psend, nsrow, nscol, k1, k2, erows ; | ^ ../Core/cholmod_change_factor.c:823:21: warning: variable 'Lpx' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~~ ../Core/cholmod_change_factor.c:823:10: warning: variable 'Ls' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_common.c -o cholmod_common.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_complex.c -o cholmod_complex.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_copy.c -o cholmod_copy.o ../Core/cholmod_copy.c: In function 'cholmod_copy': ../Core/cholmod_copy.c:275:25: warning: variable 'lo' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ ../Core/cholmod_copy.c:275:21: warning: variable 'up' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_dense.c -o cholmod_dense.o In file included from ../Core/cholmod_dense.c:45: ../Core/t_cholmod_dense.c: In function 'p_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ In file included from ../Core/cholmod_dense.c:47: ../Core/t_cholmod_dense.c: In function 'r_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ In file included from ../Core/cholmod_dense.c:49: ../Core/t_cholmod_dense.c: In function 'c_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/cholmod_dense.c: In function 'cholmod_eye': ../Core/cholmod_dense.c:300:15: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 300 | Int i, n, nz ; | ^~ ../Core/cholmod_dense.c:299:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 299 | double *Xx, *Xz ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_error.c -o cholmod_error.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_factor.c -o cholmod_factor.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_memory.c -o cholmod_memory.o ../Core/cholmod_memory.c: In function 'cholmod_malloc': ../Core/cholmod_memory.c:121:12: warning: unused variable 's' [-Wunused-variable] 121 | size_t s ; | ^ ../Core/cholmod_memory.c: In function 'cholmod_realloc': ../Core/cholmod_memory.c:311:12: warning: unused variable 's' [-Wunused-variable] 311 | size_t s ; | ^ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_sparse.c -o cholmod_sparse.o ../Core/cholmod_sparse.c: In function 'cholmod_copy_sparse': ../Core/cholmod_sparse.c:485:35: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 485 | Int p, pend, j, ncol, packed, nzmax, nz, xtype ; | ^~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_transpose.c -o cholmod_transpose.o In file included from ../Core/cholmod_transpose.c:121: ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:123: ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:125: ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:128: ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:130: ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ In file included from ../Core/cholmod_transpose.c:133: ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_triplet.c -o cholmod_triplet.o In file included from ../Core/cholmod_triplet.c:105: ../Core/t_cholmod_triplet.c: In function 'p_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:23: warning: variable 'Tx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:13: warning: variable 'Rx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:107: ../Core/t_cholmod_triplet.c: In function 'r_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:109: ../Core/t_cholmod_triplet.c: In function 'c_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/cholmod_triplet.c: In function 'cholmod_triplet_to_sparse': ../Core/cholmod_triplet.c:342:44: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 342 | Int i, j, p, k, stype, nrow, ncol, nz, ok ; | ^~ ../Core/cholmod_triplet.c:341:20: warning: variable 'Ri' set but not used [-Wunused-but-set-variable] 341 | Int *Wj, *Rp, *Ri, *Rnz, *Ti, *Tj ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Core/cholmod_version.c -o cholmod_version.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Check/cholmod_check.c -o cholmod_check.o ../Check/cholmod_check.c: In function 'check_common': ../Check/cholmod_check.c:204:61: warning: variable 'init_print' set but not used [-Wunused-but-set-variable] 204 | Int i, nrow, nmethods, ordering, xworksize, amd_backup, init_print ; | ^~~~~~~~~~ ../Check/cholmod_check.c: In function 'check_dense': ../Check/cholmod_check.c:950:37: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 950 | Int i, j, d, nrow, ncol, nzmax, nz, init_print, count, xtype ; | ^~ ../Check/cholmod_check.c: In function 'check_factor': ../Check/cholmod_check.c:1497:9: warning: variable 'ps2' set but not used [-Wunused-but-set-variable] 1497 | ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ; | ^~~ ../Check/cholmod_check.c:1495:16: warning: variable 'precise' set but not used [-Wunused-but-set-variable] 1495 | count, precise, init_print, ilast, lnz, head, tail, jprev, plast, | ^~~~~~~ ../Check/cholmod_check.c:1494:38: warning: variable 'ordering' set but not used [-Wunused-but-set-variable] 1494 | Int n, nzmax, j, p, pend, i, nz, ordering, space, is_monotonic, minor, | ^~~~~~~~ ../Check/cholmod_check.c: In function 'check_factor.constprop.0': ../Check/cholmod_check.c:1496:62: warning: 'psx' may be used uninitialized [-Wmaybe-uninitialized] 1496 | jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol, | ^~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Check/cholmod_read.c -o cholmod_read.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Check/cholmod_write.c -o cholmod_write.o ../Check/cholmod_write.c: In function 'cholmod_write_sparse': ../Check/cholmod_write.c:366:33: warning: variable 'symmetry' set but not used [-Wunused-but-set-variable] 366 | Int nrow, ncol, is_complex, symmetry, i, j, q, iz, p, nz, is_binary, stype, | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o ../Cholesky/cholmod_analyze.c: In function 'cholmod_analyze_p2': ../Cholesky/cholmod_analyze.c:419:69: warning: variable 'ncol' set but not used [-Wunused-but-set-variable] 419 | Int k, n, ordering, method, nmethods, status, default_strategy, ncol, uncol, | ^~~~ ../Cholesky/cholmod_analyze.c:416:45: warning: variable 'CParent' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ ../Cholesky/cholmod_analyze.c:416:35: warning: variable 'Cmember' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o ../Cholesky/cholmod_factorize.c: In function 'cholmod_factorize_p': ../Cholesky/cholmod_factorize.c:111:37: warning: variable 'n' set but not used [-Wunused-but-set-variable] 111 | Int nrow, ncol, stype, convert, n, nsuper, grow2, status ; | ^ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o In file included from ../Cholesky/cholmod_rowfac.c:161: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:163: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:165: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ In file included from ../Cholesky/cholmod_rowfac.c:169: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:171: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:173: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o In file included from ../Cholesky/cholmod_solve.c:63: ../Cholesky/t_cholmod_solve.c: In function 'r_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ In file included from ../Cholesky/cholmod_solve.c:66: ../Cholesky/t_cholmod_solve.c: In function 'c_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ ../Cholesky/cholmod_solve.c: In function 'iperm': ../Cholesky/cholmod_solve.c:334:13: warning: variable 'nk' set but not used [-Wunused-but-set-variable] 334 | Int k2, nk, p, k, j, nrow, ncol, d, dj, j2 ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o In file included from ../MatrixOps/cholmod_sdmult.c:44: ../MatrixOps/t_cholmod_sdmult.c: In function 'r_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:46: ../MatrixOps/t_cholmod_sdmult.c: In function 'c_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:48: ../MatrixOps/t_cholmod_sdmult.c: In function 'z_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: 'Wz' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c: In function 'cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Modify/cholmod_updown.c -o cholmod_updown.o ../Modify/cholmod_updown.c: In function 'cholmod_updown_mask2': ../Modify/cholmod_updown.c:433:40: warning: variable 'ps1' set but not used [-Wunused-but-set-variable] 433 | *Set_ps1 [32], *Set_ps2 [32], *ps1, *ps2 ; | ^~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o In file included from ../Supernodal/cholmod_super_numeric.c:82: ../Supernodal/t_cholmod_super_numeric.c: In function 'r_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:84: ../Supernodal/t_cholmod_super_numeric.c: In function 'c_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:86: ../Supernodal/t_cholmod_super_numeric.c: In function 'z_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o In file included from ../Supernodal/cholmod_super_solve.c:26: ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ In file included from ../Supernodal/cholmod_super_solve.c:28: ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o ../Supernodal/cholmod_super_symbolic.c: In function 'cholmod_super_symbolic2': ../Supernodal/cholmod_super_symbolic.c:562:21: warning: variable 'totsize' set but not used [-Wunused-but-set-variable] 562 | Int totsize ; | ^~~~~~~ ../Supernodal/cholmod_super_symbolic.c:185:12: warning: unused variable 'max_fraction' [-Wunused-variable] 185 | double max_fraction; | ^~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:184:17: warning: unused variable 'env_max_fraction' [-Wunused-variable] 184 | const char* env_max_fraction; | ^~~~~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:183:12: warning: unused variable 'max_bytes' [-Wunused-variable] 183 | size_t max_bytes; | ^~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:182:17: warning: unused variable 'env_max_bytes' [-Wunused-variable] 182 | const char* env_max_bytes; | ^~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:181:17: warning: unused variable 'env_use_gpu' [-Wunused-variable] 181 | const char* env_use_gpu; | ^~~~~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_aat.c -o cholmod_l_aat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_add.c -o cholmod_l_add.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_band.c -o cholmod_l_band.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o In file included from ../Core/cholmod_change_factor.c:113: ../Core/t_cholmod_change_factor.c: In function 'r_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ In file included from ../Core/cholmod_change_factor.c:115: ../Core/t_cholmod_change_factor.c: In function 'c_change_simplicial_numeric': ../Core/t_cholmod_change_factor.c:37:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 37 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'simplicial_symbolic_to_super_symbolic': ../Core/cholmod_change_factor.c:262:17: warning: variable 'xsize' set but not used [-Wunused-but-set-variable] 262 | Int nsuper, xsize, ssize ; | ^~~~~ ../Core/cholmod_change_factor.c: In function 'change_simplicial_numeric': ../Core/cholmod_change_factor.c:677:15: warning: variable 'Li' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:677:10: warning: variable 'Lp' set but not used [-Wunused-but-set-variable] 677 | Int *Lp, *Li, *Lnz ; | ^~ ../Core/cholmod_change_factor.c:676:18: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c:676:13: warning: variable 'Lx' set but not used [-Wunused-but-set-variable] 676 | double *Lx, *Lz ; | ^~ ../Core/cholmod_change_factor.c: In function 'll_super_to_simplicial_numeric': ../Core/cholmod_change_factor.c:824:9: warning: variable 'n' set but not used [-Wunused-but-set-variable] 824 | Int n, lnz, s, nsuper, psi, psend, nsrow, nscol, k1, k2, erows ; | ^ ../Core/cholmod_change_factor.c:823:21: warning: variable 'Lpx' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~~ ../Core/cholmod_change_factor.c:823:10: warning: variable 'Ls' set but not used [-Wunused-but-set-variable] 823 | Int *Ls, *Lpi, *Lpx, *Super, *Li ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_common.c -o cholmod_l_common.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_complex.c -o cholmod_l_complex.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_copy.c -o cholmod_l_copy.o ../Core/cholmod_copy.c: In function 'cholmod_l_copy': ../Core/cholmod_copy.c:275:25: warning: variable 'lo' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ ../Core/cholmod_copy.c:275:21: warning: variable 'up' set but not used [-Wunused-but-set-variable] 275 | Int nrow, ncol, up, lo, values, diag, astype ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_dense.c -o cholmod_l_dense.o In file included from ../Core/cholmod_dense.c:45: ../Core/t_cholmod_dense.c: In function 'p_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ In file included from ../Core/cholmod_dense.c:47: ../Core/t_cholmod_dense.c: In function 'r_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'r_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ In file included from ../Core/cholmod_dense.c:49: ../Core/t_cholmod_dense.c: In function 'c_cholmod_sparse_to_dense': ../Core/t_cholmod_dense.c:27:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c:27:23: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 27 | double *Ax, *Xx, *Az, *Xz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_dense_to_sparse': ../Core/t_cholmod_dense.c:133:28: warning: variable 'Cz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c:133:23: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 133 | double *Xx, *Cx, *Xz, *Cz ; | ^~ ../Core/t_cholmod_dense.c: In function 'c_cholmod_copy_dense2': ../Core/t_cholmod_dense.c:226:28: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/t_cholmod_dense.c:226:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 226 | double *Xx, *Xz, *Yx, *Yz ; | ^~ ../Core/cholmod_dense.c: In function 'cholmod_l_eye': ../Core/cholmod_dense.c:300:15: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 300 | Int i, n, nz ; | ^~ ../Core/cholmod_dense.c:299:18: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 299 | double *Xx, *Xz ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_error.c -o cholmod_l_error.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_factor.c -o cholmod_l_factor.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_memory.c -o cholmod_l_memory.o ../Core/cholmod_memory.c: In function 'cholmod_l_malloc': ../Core/cholmod_memory.c:121:12: warning: unused variable 's' [-Wunused-variable] 121 | size_t s ; | ^ ../Core/cholmod_memory.c: In function 'cholmod_l_realloc': ../Core/cholmod_memory.c:311:12: warning: unused variable 's' [-Wunused-variable] 311 | size_t s ; | ^ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_sparse.c -o cholmod_l_sparse.o ../Core/cholmod_sparse.c: In function 'cholmod_l_copy_sparse': ../Core/cholmod_sparse.c:485:35: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 485 | Int p, pend, j, ncol, packed, nzmax, nz, xtype ; | ^~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_transpose.c -o cholmod_l_transpose.o In file included from ../Core/cholmod_transpose.c:121: ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'p_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:23: warning: variable 'Fx' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:13: warning: variable 'Ax' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:123: ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'r_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:125: ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'c_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:128: ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:42:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:42:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 42 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c: In function 'ct_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c:139:28: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ ../Core/t_cholmod_transpose.c:139:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 139 | double *Ax, *Az, *Fx, *Fz ; | ^~ In file included from ../Core/cholmod_transpose.c:130: ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'z_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ In file included from ../Core/cholmod_transpose.c:133: ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_unsym': ../Core/t_cholmod_transpose.c:44:69: warning: variable 'permute' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:56: warning: variable 'Fpacked' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~~~~ ../Core/t_cholmod_transpose.c:44:21: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 44 | Int j, p, pend, nrow, ncol, Apacked, use_fset, fp, Fpacked, jj, permute ; | ^~~~ ../Core/t_cholmod_transpose.c:43:31: warning: variable 'Fnz' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~~ ../Core/t_cholmod_transpose.c:43:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 43 | Int *Ap, *Anz, *Ai, *Fp, *Fnz, *Fj, *Wi, *Iwork ; | ^~ ../Core/t_cholmod_transpose.c: In function 'zt_cholmod_transpose_sym': ../Core/t_cholmod_transpose.c:140:26: warning: variable 'Fp' set but not used [-Wunused-but-set-variable] 140 | Int *Ap, *Anz, *Ai, *Fp, *Fj, *Wi, *Pinv, *Iwork ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_triplet.c -o cholmod_l_triplet.o In file included from ../Core/cholmod_triplet.c:105: ../Core/t_cholmod_triplet.c: In function 'p_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:23: warning: variable 'Tx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:13: warning: variable 'Rx' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:107: ../Core/t_cholmod_triplet.c: In function 'r_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ In file included from ../Core/cholmod_triplet.c:109: ../Core/t_cholmod_triplet.c: In function 'c_cholmod_triplet_to_sparse': ../Core/t_cholmod_triplet.c:28:28: warning: variable 'Tz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/t_cholmod_triplet.c:28:18: warning: variable 'Rz' set but not used [-Wunused-but-set-variable] 28 | double *Rx, *Rz, *Tx, *Tz ; | ^~ ../Core/cholmod_triplet.c: In function 'cholmod_l_triplet_to_sparse': ../Core/cholmod_triplet.c:342:44: warning: variable 'ok' set but not used [-Wunused-but-set-variable] 342 | Int i, j, p, k, stype, nrow, ncol, nz, ok ; | ^~ ../Core/cholmod_triplet.c:341:20: warning: variable 'Ri' set but not used [-Wunused-but-set-variable] 341 | Int *Wj, *Rp, *Ri, *Rnz, *Ti, *Tj ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Core/cholmod_version.c -o cholmod_l_version.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Check/cholmod_check.c -o cholmod_l_check.o ../Check/cholmod_check.c: In function 'check_common': ../Check/cholmod_check.c:204:61: warning: variable 'init_print' set but not used [-Wunused-but-set-variable] 204 | Int i, nrow, nmethods, ordering, xworksize, amd_backup, init_print ; | ^~~~~~~~~~ ../Check/cholmod_check.c: In function 'check_dense': ../Check/cholmod_check.c:950:37: warning: variable 'nz' set but not used [-Wunused-but-set-variable] 950 | Int i, j, d, nrow, ncol, nzmax, nz, init_print, count, xtype ; | ^~ ../Check/cholmod_check.c: In function 'check_factor': ../Check/cholmod_check.c:1497:9: warning: variable 'ps2' set but not used [-Wunused-but-set-variable] 1497 | ps2, psxend, ssize, xsize, maxcsize, maxesize, nsrow2, jj, ii, xtype ; | ^~~ ../Check/cholmod_check.c:1495:16: warning: variable 'precise' set but not used [-Wunused-but-set-variable] 1495 | count, precise, init_print, ilast, lnz, head, tail, jprev, plast, | ^~~~~~~ ../Check/cholmod_check.c:1494:38: warning: variable 'ordering' set but not used [-Wunused-but-set-variable] 1494 | Int n, nzmax, j, p, pend, i, nz, ordering, space, is_monotonic, minor, | ^~~~~~~~ ../Check/cholmod_check.c: In function 'check_factor.constprop.0': ../Check/cholmod_check.c:1496:62: warning: 'psx' may be used uninitialized [-Wmaybe-uninitialized] 1496 | jnext, examine_super, nsuper, s, k1, k2, psi, psend, psx, nsrow, nscol, | ^~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Check/cholmod_read.c -o cholmod_l_read.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Check/cholmod_write.c -o cholmod_l_write.o ../Check/cholmod_write.c: In function 'cholmod_l_write_sparse': ../Check/cholmod_write.c:366:33: warning: variable 'symmetry' set but not used [-Wunused-but-set-variable] 366 | Int nrow, ncol, is_complex, symmetry, i, j, q, iz, p, nz, is_binary, stype, | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o ../Cholesky/cholmod_analyze.c: In function 'cholmod_l_analyze_p2': ../Cholesky/cholmod_analyze.c:419:69: warning: variable 'ncol' set but not used [-Wunused-but-set-variable] 419 | Int k, n, ordering, method, nmethods, status, default_strategy, ncol, uncol, | ^~~~ ../Cholesky/cholmod_analyze.c:416:45: warning: variable 'CParent' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ ../Cholesky/cholmod_analyze.c:416:35: warning: variable 'Cmember' set but not used [-Wunused-but-set-variable] 416 | Int *First, *Level, *Work4n, *Cmember, *CParent, *ColCount, *Lperm, *Parent, | ^~~~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o ../Cholesky/cholmod_factorize.c: In function 'cholmod_l_factorize_p': ../Cholesky/cholmod_factorize.c:111:37: warning: variable 'n' set but not used [-Wunused-but-set-variable] 111 | Int nrow, ncol, stype, convert, n, nsuper, grow2, status ; | ^ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o In file included from ../Cholesky/cholmod_rowfac.c:161: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:163: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:165: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ In file included from ../Cholesky/cholmod_rowfac.c:169: ../Cholesky/t_cholmod_rowfac.c: In function 'r_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:171: ../Cholesky/t_cholmod_rowfac.c: In function 'c_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ ../Cholesky/t_cholmod_rowfac.c:46:48: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:38: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:28: warning: variable 'Lz' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ ../Cholesky/t_cholmod_rowfac.c:46:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 46 | double *Ax, *Az, *Lx, *Lz, *Wx, *Wz, *Fx, *Fz ; | ^~ In file included from ../Cholesky/cholmod_rowfac.c:173: ../Cholesky/t_cholmod_rowfac.c: In function 'z_cholmod_rowfac_mask': ../Cholesky/t_cholmod_rowfac.c:50:53: warning: variable 'nzmax' set but not used [-Wunused-but-set-variable] 50 | use_dbound, packed, stype, Fpacked, sorted, nzmax, len, parent ; | ^~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o In file included from ../Cholesky/cholmod_solve.c:63: ../Cholesky/t_cholmod_solve.c: In function 'r_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ In file included from ../Cholesky/cholmod_solve.c:66: ../Cholesky/t_cholmod_solve.c: In function 'c_ldl_dsolve': ../Cholesky/t_cholmod_solve.c:61:23: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 61 | double *Lx, *Yx, *Yz ; | ^~ ../Cholesky/cholmod_solve.c: In function 'iperm': ../Cholesky/cholmod_solve.c:334:13: warning: variable 'nk' set but not used [-Wunused-but-set-variable] 334 | Int k2, nk, p, k, j, nrow, ncol, d, dj, j2 ; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o In file included from ../MatrixOps/cholmod_sdmult.c:44: ../MatrixOps/t_cholmod_sdmult.c: In function 'r_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:46: ../MatrixOps/t_cholmod_sdmult.c: In function 'c_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: variable 'Wz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:38: warning: variable 'Yz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:28: warning: variable 'Xz' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c:49:18: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ In file included from ../MatrixOps/cholmod_sdmult.c:48: ../MatrixOps/t_cholmod_sdmult.c: In function 'z_cholmod_sdmult': ../MatrixOps/t_cholmod_sdmult.c:52:17: warning: variable 'nrow' set but not used [-Wunused-but-set-variable] 52 | Int packed, nrow, ncol, j, k, p, pend, kcol, i ; | ^~~~ ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ ../MatrixOps/t_cholmod_sdmult.c:49:47: warning: 'Wz' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^~ ../MatrixOps/t_cholmod_sdmult.c: In function 'cholmod_l_sdmult': ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ ../MatrixOps/t_cholmod_sdmult.c:49:43: warning: 'w' may be used uninitialized [-Wmaybe-uninitialized] 49 | double *Ax, *Az, *Xx, *Xz, *Yx, *Yz, *w, *Wz ; | ^ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Modify/cholmod_updown.c -o cholmod_l_updown.o ../Modify/cholmod_updown.c: In function 'cholmod_l_updown_mask2': ../Modify/cholmod_updown.c:433:40: warning: variable 'ps1' set but not used [-Wunused-but-set-variable] 433 | *Set_ps1 [32], *Set_ps2 [32], *ps1, *ps2 ; | ^~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o In file included from ../Supernodal/cholmod_super_numeric.c:82: ../Supernodal/t_cholmod_super_numeric.c: In function 'r_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:84: ../Supernodal/t_cholmod_super_numeric.c: In function 'c_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ ../Supernodal/t_cholmod_super_numeric.c:108:33: warning: variable 'Fz' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ ../Supernodal/t_cholmod_super_numeric.c:108:28: warning: variable 'Az' set but not used [-Wunused-but-set-variable] 108 | double *Lx, *Ax, *Fx, *Az, *Fz, *C ; | ^~ In file included from ../Supernodal/cholmod_super_numeric.c:86: ../Supernodal/t_cholmod_super_numeric.c: In function 'z_cholmod_super_numeric': ../Supernodal/t_cholmod_super_numeric.c:249: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 249 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:311: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 311 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:326: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 326 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:355: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 355 | #pragma omp parallel for private ( p, pend, pfend, pf, i, j, imap, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:743: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 743 | #pragma omp parallel for num_threads(CHOLMOD_OMP_NUM_THREADS) \ | ../Supernodal/t_cholmod_super_numeric.c:756: warning: ignoring '#pragma omp parallel' [-Wunknown-pragmas] 756 | #pragma omp parallel for private ( j, i, px, q ) \ | ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] 116 | tail, nscol_new = 0; | ^~~~ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] 113 | pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, | ^~ ../Supernodal/t_cholmod_super_numeric.c:111:10: warning: variable 'Previous' set but not used [-Wunused-but-set-variable] 111 | *Previous; | ^~~~~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o In file included from ../Supernodal/cholmod_super_solve.c:26: ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'r_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ In file included from ../Supernodal/cholmod_super_solve.c:28: ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_lsolve': ../Supernodal/t_cholmod_super_solve.c:30:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 30 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ ../Supernodal/t_cholmod_super_solve.c: In function 'c_cholmod_super_ltsolve': ../Supernodal/t_cholmod_super_solve.c:238:17: warning: variable 'n' set but not used [-Wunused-but-set-variable] 238 | nsrow2, n, ps2, j, i, d, nrhs ; | ^ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -DDLONG -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o ../Supernodal/cholmod_super_symbolic.c: In function 'cholmod_l_super_symbolic2': ../Supernodal/cholmod_super_symbolic.c:562:21: warning: variable 'totsize' set but not used [-Wunused-but-set-variable] 562 | Int totsize ; | ^~~~~~~ ../Supernodal/cholmod_super_symbolic.c:185:12: warning: unused variable 'max_fraction' [-Wunused-variable] 185 | double max_fraction; | ^~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:184:17: warning: unused variable 'env_max_fraction' [-Wunused-variable] 184 | const char* env_max_fraction; | ^~~~~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:183:12: warning: unused variable 'max_bytes' [-Wunused-variable] 183 | size_t max_bytes; | ^~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:182:17: warning: unused variable 'env_max_bytes' [-Wunused-variable] 182 | const char* env_max_bytes; | ^~~~~~~~~~~~~ ../Supernodal/cholmod_super_symbolic.c:181:17: warning: unused variable 'env_use_gpu' [-Wunused-variable] 181 | const char* env_use_gpu; | ^~~~~~~~~~~ ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o make[5]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/CHOLMOD' make[4]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/COLAMD' ( cd Source ; make -f "/builddir/build/BUILD/R-4.3.1/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/COLAMD/Source' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c colamd.c -o colamd.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c colamd.c -o colamd_l.o ar -rucs ../../COLAMD.a colamd.o colamd_l.o make[5]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/COLAMD' make[4]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/AMD' ( cd Source ; make -f "/builddir/build/BUILD/R-4.3.1/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/AMD/Source' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_1.c -o amd_i_1.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_1.c -o amd_l_1.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_2.c -o amd_i_2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_2.c -o amd_l_2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_order.c -o amd_i_order.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_order.c -o amd_l_order.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_control.c -o amd_i_control.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_control.c -o amd_l_control.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_info.c -o amd_i_info.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_info.c -o amd_l_info.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o make[5]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/AMD/Source' make[4]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/AMD' make[4]: Entering directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/SuiteSparse_config' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -DNTIMER -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c SuiteSparse_config.c -o SuiteSparse_config.o ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o make[4]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src/SuiteSparse_config' gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o Matrix.so CHMfactor.o Csparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o sparseQR.o sparseVector.o abIndex.o packedMatrix.o unpackedMatrix.o sparse.o subscript.o validity.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -lflexiblas -lflexiblas -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/Rtmp4CWFlv/R.INSTALL2c7e5246459b07/Matrix/src' installing to /builddir/build/BUILD/R-4.3.1/library/Matrix/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix' Creating a generic function for 'drop' from package 'base' in package 'Matrix' Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix' Creating a generic function for 'unname' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csc","RsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.coo","RsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","sparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","sparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","sparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"Matrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"Matrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"Matrix","matrix.coo"': no definition for class "matrix.coo" Creating a generic function for 'chol2inv' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix' Creating a generic function for 'colSums' from package 'base' in package 'Matrix' Creating a generic function for 'colMeans' from package 'base' in package 'Matrix' Creating a generic function for 'rowSums' from package 'base' in package 'Matrix' Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix' Creating a generic function for 'diag' from package 'base' in package 'Matrix' Creating a generic function for 'diag<-' from package 'base' in package 'Matrix' Creating a generic function for 'crossprod' from package 'base' in package 'Matrix' Creating a generic function for 'tcrossprod' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"graphAM","TsparseMatrix"': no definition for class "graphAM" in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","RsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","TsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","sparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph" in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"Matrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"Matrix","graph"': no definition for class "graph" Creating a generic function for 'norm' from package 'base' in package 'Matrix' Creating a generic function for 'rcond' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'rcond' from package 'base' in package 'Matrix' Creating a generic function for 'qr.R' from package 'base' in package 'Matrix' Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix' Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix' Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix' Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix' Creating a generic function for 'toeplitz' from 'stats' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'toeplitz' from package 'stats' in package 'Matrix' Creating a generic function for 'which' from package 'base' in package 'Matrix' ** help *** installing help indices converting help for package 'Matrix' finding HTML links ... done BunchKaufman-methods html CAex html CHMfactor-class html Cholesky-class html Cholesky html CsparseMatrix-class html Diagonal html Hilbert html KNex html KhatriRao html LU-class html Matrix-class html Matrix-defunct html Matrix-deprecated html Matrix html MatrixClass html MatrixFactorization-class html RsparseMatrix-class html Schur-class html Schur html SparseM-conv html Subassign-methods html TsparseMatrix-class html USCounties html Xtrct-methods html abIndex-class html abIseq html all-methods html all.equal-methods html atomicVector-class html band html bandSparse html bdiag html boolean-matprod html cBind html chol html chol2inv-methods html colSums html compMatrix-class html condest html dMatrix-class html ddenseMatrix-class html ddiMatrix-class html denseMatrix-class html dgCMatrix-class html dgRMatrix-class html dgTMatrix-class html dgeMatrix-class html diagU2N html diagonalMatrix-class html dimScale html dmperm html dpoMatrix-class html drop0 html dsCMatrix-class html dsRMatrix-class html dsparseMatrix-class html dsyMatrix-class html dtCMatrix-class html dtRMatrix-class-def html dtpMatrix-class html dtrMatrix-class html expand html expm html externalFormats html facmul html fastMisc html forceSymmetric html formatSparseM html generalMatrix-class html graph2T html image-methods html indMatrix-class html index-class html invPerm html is.na-methods html is.null.DN html isSymmetric-methods html isTriangular html kronecker-methods html ldenseMatrix-class html ldiMatrix-class html lgeMatrix-class html lsparseMatrix-classes html lsyMatrix-class html ltrMatrix-class html lu html mat2triplet html matrix-products html nMatrix-class html ndenseMatrix-class html nearPD html ngeMatrix-class html nnzero html norm html nsparseMatrix-classes html nsyMatrix-class html ntrMatrix-class html number-class html pMatrix-class html packedMatrix-class html printSpMatrix html qr-methods html rankMatrix html rcond html rep2abI html replValue-class html rleDiff-class html rsparsematrix html solve-methods html spMatrix html sparse.model.matrix html sparseLU-class html sparseMatrix-class html sparseMatrix html sparseQR-class html sparseVector-class html sparseVector html symmetricMatrix-class html symmpart html triangularMatrix-class html uniqTsparse html unpack html unpackedMatrix-class html unused-classes html updown html wrld_1deg html ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (Matrix) Making 'packages.html' ... done begin installing recommended package nlme * installing *source* package 'nlme' ... ** package 'nlme' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' using Fortran compiler: 'GNU Fortran (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/RtmpmWhzp0/R.INSTALL2c80f53f4e7e86/nlme/src' gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c chol.f -o chol.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: chol.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c corStruct.c -o corStruct.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gnls.c -o gnls.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c matrix.c -o matrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nlOptimizer.c -o nlOptimizer.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nlme.c -o nlme.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nlmefit.c -o nlmefit.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pdMat.c -o pdMat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pythag.c -o pythag.o gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c rs.f -o rs.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: rs.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/RtmpmWhzp0/R.INSTALL2c80f53f4e7e86/nlme/src' installing to /builddir/build/BUILD/R-4.3.1/library/nlme/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'nlme' finding HTML links ... done ACF html ACF.gls html ACF.lme html Alfalfa html Assay html BodyWeight html Cefamandole html Coef html Covariate html Covariate.varFunc html Dialyzer html Dim html Dim.corSpatial html Dim.corStruct html Dim.pdMat html Earthquake html Extract.pdMat html Fatigue html Gasoline html Glucose html Glucose2 html Gun html IGF html Initialize html Initialize.corStruct html Initialize.glsStruct html Initialize.lmeStruct html Initialize.reStruct html Initialize.varFunc html LDEsysMat html Machines html MathAchSchool html MathAchieve html Matrix html Matrix.pdMat html Matrix.reStruct html Meat html Milk html Muscle html Names html Names.formula html Names.pdBlocked html Names.pdMat html Names.reStruct html Nitrendipene html Oats html Orthodont html Ovary html Oxboys html Oxide html PBG html Phenobarb html Pixel html Quinidine html Rail html RatPupWeight html Relaxin html Remifentanil html Soybean html Spruce html Tetracycline1 html Tetracycline2 html VarCorr html Variogram html Variogram.corExp html Variogram.corGaus html Variogram.corLin html Variogram.corRatio html Variogram.corSpatial html Variogram.corSpher html Variogram.default html Variogram.gls html Variogram.lme html Wafer html Wheat html Wheat2 html allCoef html anova.gls html anova.lme html as.matrix.corStruct html as.matrix.pdMat html as.matrix.reStruct html asOneFormula html asTable html augPred html balancedGrouped html bdf html coef.corStruct html coef.gnls html coef.lmList html coef.lme html coef.modelStruct html coef.pdMat html coef.reStruct html coef.varFunc html collapse html collapse.groupedData html compareFits html comparePred html corAR1 html corARMA html corCAR1 html corClasses html corCompSymm html corExp html corFactor html corFactor.corStruct html corGaus html corLin html corMatrix html corMatrix.corStruct html corMatrix.pdMat html corMatrix.reStruct html corNatural html corRatio html corSpatial html corSpher html corSymm html ergoStool html fdHess html fitted.glsStruct html fitted.gnlsStruct html fitted.lmList html fitted.lme html fitted.lmeStruct html fitted.nlmeStruct html fixed.effects html fixef.lmList html formula.pdBlocked html formula.pdMat html formula.reStruct html gapply html getCovariate html getCovariate.corStruct html getCovariate.data.frame html getCovariate.varFunc html getCovariateFormula html getData html getData.gls html getData.lmList html getData.lme html getGroups html getGroups.corStruct html getGroups.data.frame html getGroups.gls html getGroups.lmList html getGroups.lme html getGroups.varFunc html getGroupsFormula html getResponse html getResponseFormula html getVarCov html gls-internal html gls html glsControl html glsObject html glsStruct html gnls html gnlsControl html gnlsObject html gnlsStruct html groupedData html gsummary html intervals html intervals.gls html intervals.lmList html intervals.lme html isBalanced html isInitialized html lmList html lmList.groupedData html lme html lme.groupedData html lme.lmList html lmeControl html lmeObject html lmeStruct html logDet html logDet.corStruct html logDet.pdMat html logDet.reStruct html logLik.corStruct html logLik.glsStruct html logLik.gnls html logLik.gnlsStruct html logLik.lmList html logLik.lme html logLik.lmeStruct html logLik.reStruct html logLik.varFunc html model.matrix.reStruct html needUpdate html needUpdate.modelStruct html nlme-deprecated html nlme html nlme.nlsList html nlmeControl html nlmeObject html nlmeStruct html nlsList html nlsList.selfStart html pairs.compareFits html pairs.lmList html pairs.lme html pdBlocked html pdClasses html pdCompSymm html pdConstruct html pdConstruct.pdBlocked html pdDiag html pdFactor html pdFactor.reStruct html pdIdent html pdLogChol html pdMat html pdMatrix html pdMatrix.reStruct html pdNatural html pdSymm html phenoModel html plot.ACF html plot.Variogram html plot.augPred html plot.compareFits html plot.gls html plot.intervals.lmList html plot.lmList html plot.lme html plot.nffGroupedData html plot.nfnGroupedData html plot.nmGroupedData html plot.ranef.lmList html plot.ranef.lme html pooledSD html predict.gls html predict.gnls html predict.lmList html predict.lme html predict.nlme html print.summary.pdMat html print.varFunc html qqnorm.gls html qqnorm.lme html quinModel html random.effects html ranef.lmList html ranef.lme html reStruct html recalc html recalc.corStruct html recalc.modelStruct html recalc.reStruct html recalc.varFunc html residuals.gls html residuals.glsStruct html residuals.gnlsStruct html residuals.lmList html residuals.lme html residuals.lmeStruct html residuals.nlmeStruct html simulate.lme html solve.pdMat html solve.reStruct html splitFormula html summary.corStruct html summary.gls html summary.lmList html summary.lme html summary.modelStruct html summary.nlsList html summary.pdMat html summary.varFunc html update.modelStruct html update.varFunc html varClasses html varComb html varConstPower html varConstProp html varExp html varFixed html varFunc html varIdent html varPower html varWeights html varWeights.glsStruct html varWeights.lmeStruct html ** building package indices ** testing if installed package can be loaded * DONE (nlme) Making 'packages.html' ... done begin installing recommended package survival * installing *source* package 'survival' ... ** package 'survival' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/RtmpzJvK4u/R.INSTALL2c81534d0af489/survival/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agexact.c -o agexact.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agfit4.c -o agfit4.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agfit5.c -o agfit5.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agmart.c -o agmart.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agmart3.c -o agmart3.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agscore2.c -o agscore2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agsurv4.c -o agsurv4.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c agsurv5.c -o agsurv5.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cdecomp.c -o cdecomp.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chinv2.c -o chinv2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chinv3.c -o chinv3.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cholesky2.c -o cholesky2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cholesky3.c -o cholesky3.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cholesky5.c -o cholesky5.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chsolve2.c -o chsolve2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chsolve3.c -o chsolve3.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chsolve5.c -o chsolve5.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c collapse.c -o collapse.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c concordance1.c -o concordance1.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c concordance3.c -o concordance3.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c concordance5.c -o concordance5.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cox_Rcallback.c -o cox_Rcallback.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxcount1.c -o coxcount1.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxdetail.c -o coxdetail.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxexact.c -o coxexact.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxfit5.c -o coxfit5.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxfit6.c -o coxfit6.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxmart.c -o coxmart.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxmart2.c -o coxmart2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxph_wtest.c -o coxph_wtest.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxsafe.c -o coxsafe.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxscho.c -o coxscho.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxscore2.c -o coxscore2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxsurv1.c -o coxsurv1.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxsurv2.c -o coxsurv2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxsurv3.c -o coxsurv3.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxsurv4.c -o coxsurv4.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dmatrix.c -o dmatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c doloop.c -o doloop.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fastkm.c -o fastkm.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c finegray.c -o finegray.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gchol.c -o gchol.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c multicheck.c -o multicheck.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c norisk.c -o norisk.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pyears1.c -o pyears1.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pyears2.c -o pyears2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pyears3b.c -o pyears3b.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pystep.c -o pystep.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survConcordance.c -o survConcordance.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survdiff2.c -o survdiff2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survfit4.c -o survfit4.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survfitci.c -o survfitci.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survfitkm.c -o survfitkm.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survfitresid.c -o survfitresid.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survpenal.c -o survpenal.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survreg6.c -o survreg6.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survreg7.c -o survreg7.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survregc1.c -o survregc1.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survregc2.c -o survregc2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c survsplit.c -o survsplit.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tmerge.c -o tmerge.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c zph1.c -o zph1.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c zph2.c -o zph2.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart3.o agscore2.o agsurv4.o agsurv5.o cdecomp.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o collapse.o concordance1.o concordance3.o concordance5.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore2.o coxsurv1.o coxsurv2.o coxsurv3.o coxsurv4.o dmatrix.o doloop.o fastkm.o finegray.o gchol.o init.o multicheck.o norisk.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survfitkm.o survfitresid.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o zph1.o zph2.o -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/RtmpzJvK4u/R.INSTALL2c81534d0af489/survival/src' installing to /builddir/build/BUILD/R-4.3.1/library/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'survival' finding HTML links ... done Surv html Surv2 html Surv2data html Survmethods html aareg html aeqSurv html aggregate.survfit html agreg.fit html aml html anova.coxph html attrassign html basehaz html bladder html blogit html cch html cgd html cgd0 html cipoisson html clogit html cluster html colon html concordance html concordancefit html cox.zph html coxph html coxph.control html coxph.detail html coxph.object html coxph.wtest html coxphms.object html coxsurv.fit html diabetic html dsurvreg html finegray html flchain html frailty html gbsg html heart html is.ratetable html kidney html levels.Surv html lines.survfit html logLik.coxph html logan html lung html mgus html mgus2 html model.frame.coxph html model.matrix.coxph html myeloid html myeloma html nafld html neardate html nsk html nwtco html ovarian html pbc html pbcseq html plot.aareg html plot.cox.zph html plot.survfit html predict.coxph html predict.survreg html print.aareg html print.summary.coxph html print.summary.survexp html print.summary.survfit html print.survfit html pseudo html pspline html pyears html quantile.survfit html ratetable html ratetableDate html rats html rats2 html reliability html residuals.coxph html residuals.survfit html residuals.survreg html retinopathy html rhDNase html ridge html rotterdam html royston html rttright html solder html stanford2 html statefig html strata html summary.aareg html summary.coxph html summary.pyears html summary.survexp html summary.survfit html survSplit html survcheck html survcondense html survdiff html survexp html survexp.fit html survexp.object html survexp.us html survfit html survfit.coxph html survfit.formula html survfit.matrix html survfit.object html survfit0 html survfitcoxph.fit html survival-deprecated html survival-internal html survobrien html survreg html survreg.control html survreg.distributions html survreg.object html survregDtest html tcut html tmerge html tobin html transplant html udca html untangle.specials html uspop2 html vcov.coxph html veteran html xtfrm.Surv html yates html yates_setup html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (survival) Making 'packages.html' ... done begin installing recommended package boot * installing *source* package 'boot' ... ** package 'boot' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'boot' finding HTML links ... done EEF.profile html Imp.Estimates html abc.ci html acme html aids html aircondit html amis html aml html beaver html bigcity html boot-practicals html boot html boot.array html boot.ci html brambles html breslow html calcium html cane html capability html catsM html cav html cd4 html cd4.nested html censboot html channing html claridge html cloth html co.transfer html coal html control html corr html cum3 html cv.glm html darwin html dogs html downs.bc html ducks html empinf html envelope html exp.tilt html fir html freq.array html frets html glm.diag html glm.diag.plots html gravity html hirose html imp.weights html inv.logit html islay html jack.after.boot html k3.linear html linear.approx html lines.saddle.distn html logit html manaus html melanoma html motor html neuro html nitrofen html nodal html norm.ci html nuclear html paulsen html plot.boot html poisons html polar html print.boot html print.bootci html print.saddle.distn html print.simplex html remission html saddle html saddle.distn html saddle.distn.object html salinity html simplex html simplex.object html smooth.f html sunspot html survival html tau html tilt.boot html tsboot html tuna html urine html var.linear html wool html ** building package indices ** testing if installed package can be loaded * DONE (boot) Making 'packages.html' ... done begin installing recommended package cluster * installing *source* package 'cluster' ... ** package 'cluster' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' using Fortran compiler: 'GNU Fortran (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/RtmphvdG0x/R.INSTALL2c82804cb1dc4a/cluster/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c clara.c -o clara.o gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c daisy.f -o daisy.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: daisy.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dysta.f -o dysta.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dysta.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fanny.c -o fanny.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mona.c -o mona.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pam.c -o pam.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sildist.c -o sildist.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c spannel.c -o spannel.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c twins.c -o twins.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/RtmphvdG0x/R.INSTALL2c82804cb1dc4a/cluster/src' installing to /builddir/build/BUILD/R-4.3.1/library/cluster/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'cluster' finding HTML links ... done agnes html agnes.object html agriculture html animals html bannerplot html chorSub html clara html clara.object html clusGap html clusplot.default html clusplot.partition html cluster-internal html coef.hclust html daisy html diana html dissimilarity.object html ellipsoidhull html fanny html fanny.object html flower html lower.to.upper.tri.inds html medoids html mona html mona.object html pam html pam.object html partition.object html plantTraits html plot.agnes html plot.diana html plot.mona html plot.partition html pltree html pluton html predict.ellipsoid html print.agnes html print.clara html print.diana html print.dissimilarity html print.fanny html print.mona html print.pam html ruspini html silhouette html sizeDiss html summary.agnes html summary.clara html summary.diana html summary.mona html summary.pam html twins.object html volume.ellipsoid html votes.repub html xclara html ** building package indices ** testing if installed package can be loaded * DONE (cluster) Making 'packages.html' ... done begin installing recommended package codetools * installing *source* package 'codetools' ... ** package 'codetools' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'codetools' finding HTML links ... done checkUsage html codetools html findGlobals html showTree html ** building package indices ** testing if installed package can be loaded * DONE (codetools) Making 'packages.html' ... done begin installing recommended package foreign * installing *source* package 'foreign' ... ** package 'foreign' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/RtmpFHKrU0/R.INSTALL2c82f8de0b6db/foreign/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c R_systat.c -o R_systat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rdbfread.c -o Rdbfread.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c Rdbfwrite.c -o Rdbfwrite.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c SASxport.c -o SASxport.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c avl.c -o avl.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbfopen.c -o dbfopen.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c file-handle.c -o file-handle.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c format.c -o format.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c minitab.c -o minitab.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pfm-read.c -o pfm-read.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sfm-read.c -o sfm-read.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c spss.c -o spss.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stataread.c -o stataread.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/RtmpFHKrU0/R.INSTALL2c82f8de0b6db/foreign/src' installing to /builddir/build/BUILD/R-4.3.1/library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'foreign' finding HTML links ... done lookup.xport html read.S html read.arff html read.dbf html read.dta html read.epiinfo html read.mtp html read.octave html read.spss html read.ssd html read.systat html read.xport html write.arff html write.dbf html write.dta html write.foreign html ** building package indices ** testing if installed package can be loaded * DONE (foreign) Making 'packages.html' ... done begin installing recommended package KernSmooth * installing *source* package 'KernSmooth' ... ** package 'KernSmooth' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' using Fortran compiler: 'GNU Fortran (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/RtmpPnoYNI/R.INSTALL2c835f305bdf92/KernSmooth/src' gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c blkest.f -o blkest.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: blkest.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c cp.f -o cp.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: cp.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dgedi.f -o dgedi.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dgedi.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dgefa.f -o dgefa.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dgefa.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c dgesl.f -o dgesl.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: dgesl.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c linbin.f -o linbin.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: linbin.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c linbin2D.f -o linbin2D.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: linbin2D.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c locpoly.f -o locpoly.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: locpoly.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c rlbin.f -o rlbin.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: rlbin.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sdiag.f -o sdiag.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: sdiag.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gfortran -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules -c sstdiag.f -o sstdiag.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: -D_FORTIFY_SOURCE not defined annobin: sstdiag.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -lflexiblas -L -L -lgfortran -lm -L -L -lgfortran -lm -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/RtmpPnoYNI/R.INSTALL2c835f305bdf92/KernSmooth/src' installing to /builddir/build/BUILD/R-4.3.1/library/KernSmooth/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'KernSmooth' finding HTML links ... done bkde html bkde2D html bkfe html dpih html dpik html dpill html locpoly html ** building package indices ** testing if installed package can be loaded * DONE (KernSmooth) Making 'packages.html' ... done begin installing recommended package rpart * installing *source* package 'rpart' ... ** package 'rpart' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/Rtmp1tvRfx/R.INSTALL2c83ba79da49d4/rpart/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c anova.c -o anova.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c anovapred.c -o anovapred.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c branch.c -o branch.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bsplit.c -o bsplit.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c choose_surg.c -o choose_surg.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fix_cp.c -o fix_cp.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c free_tree.c -o free_tree.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gini.c -o gini.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c graycode.c -o graycode.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c insert_split.c -o insert_split.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c make_cp_list.c -o make_cp_list.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c make_cp_table.c -o make_cp_table.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mysort.c -o mysort.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nodesplit.c -o nodesplit.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c partition.c -o partition.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c poisson.c -o poisson.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pred_rpart.c -o pred_rpart.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c print_tree.c -o print_tree.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpart.c -o rpart.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpart_callback.c -o rpart_callback.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpartexp.c -o rpartexp.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpartexp2.c -o rpartexp2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpcountup.c -o rpcountup.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpmatrix.c -o rpmatrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rundown.c -o rundown.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rundown2.c -o rundown2.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c surrogate.c -o surrogate.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c usersplit.c -o usersplit.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c xpred.c -o xpred.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c xval.c -o xval.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/Rtmp1tvRfx/R.INSTALL2c83ba79da49d4/rpart/src' installing to /builddir/build/BUILD/R-4.3.1/library/rpart/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'rpart' finding HTML links ... done car.test.frame html car90 html cu.summary html kyphosis html labels.rpart html meanvar.rpart html na.rpart html path.rpart html plot.rpart html plotcp html post.rpart html predict.rpart html print.rpart html printcp html prune.rpart html residuals.rpart html rpart-internal html rpart html rpart.control html rpart.exp html rpart.object html rsq.rpart html snip.rpart html solder.balance html stagec html summary.rpart html text.rpart html xpred.rpart html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (rpart) Making 'packages.html' ... done begin installing recommended package class * installing *source* package 'class' ... ** package 'class' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/Rtmp60Yi2b/R.INSTALL2c844e76f08cb3/class/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c class.c -o class.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o class.so class.o -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/Rtmp60Yi2b/R.INSTALL2c844e76f08cb3/class/src' installing to /builddir/build/BUILD/R-4.3.1/library/class/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'class' finding HTML links ... done SOM html batchSOM html condense html knn html knn.cv html knn1 html lvq1 html lvq2 html lvq3 html lvqinit html lvqtest html multiedit html olvq1 html reduce.nn html somgrid html ** building package indices ** testing if installed package can be loaded * DONE (class) Making 'packages.html' ... done begin installing recommended package nnet * installing *source* package 'nnet' ... ** package 'nnet' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/RtmpkJr4eP/R.INSTALL2c84868968d8e/nnet/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c nnet.c -o nnet.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o nnet.so nnet.o -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/RtmpkJr4eP/R.INSTALL2c84868968d8e/nnet/src' installing to /builddir/build/BUILD/R-4.3.1/library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'nnet' finding HTML links ... done class.ind html multinom html nnet.Hess html nnet html predict.nnet html which.is.max html ** building package indices ** testing if installed package can be loaded * DONE (nnet) Making 'packages.html' ... done begin installing recommended package spatial * installing *source* package 'spatial' ... ** package 'spatial' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/Rtmpjw8MKo/R.INSTALL2c84be59e4a9c/spatial/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c krc.c -o krc.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pps.c -o pps.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o spatial.so init.o krc.o pps.o -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/Rtmpjw8MKo/R.INSTALL2c84be59e4a9c/spatial/src' installing to /builddir/build/BUILD/R-4.3.1/library/spatial/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'spatial' finding HTML links ... done Kaver html Kenvl html Kfn html Psim html SSI html Strauss html anova.trls html correlogram html expcov html ppgetregion html ppinit html pplik html ppregion html predict.trls html prmat html semat html surf.gls html surf.ls html trls.influence html trmat html variogram html ** building package indices ** testing if installed package can be loaded * DONE (spatial) Making 'packages.html' ... done begin installing recommended package mgcv * installing *source* package 'mgcv' ... ** package 'mgcv' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[3]: Entering directory '/tmp/RtmpTmEWa0/R.INSTALL2c84fc100236fe/mgcv/src' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c coxph.c -o coxph.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c davies.c -o davies.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c discrete.c -o discrete.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gdi.c -o gdi.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c init.c -o init.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c magic.c -o magic.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mat.c -o mat.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c matrix.c -o matrix.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mgcv.c -o mgcv.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c misc.c -o misc.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mvn.c -o mvn.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ncv.c -o ncv.o ncv.c: In function 'ncvls': ncv.c:877:76: warning: 'deta' may be used uninitialized [-Wmaybe-uninitialized] 877 | double *X,*H,*Hi,*l1,*l2,*l3=NULL,*beta,*g,*Hp,xx,z,*d,*d1,*cgwork,*eta,*deta,v,*db=NULL,*dbp,*detacv,*dh; | ^~~~ ncv.c:877:98: warning: 'detacv' may be used uninitialized [-Wmaybe-uninitialized] 877 | double *X,*H,*Hi,*l1,*l2,*l3=NULL,*beta,*g,*Hp,xx,z,*d,*d1,*cgwork,*eta,*deta,v,*db=NULL,*dbp,*detacv,*dh; | ^~~~~~ ncv.c: In function 'Rncvls0': ncv.c:1030:64: warning: 'deta' may be used uninitialized [-Wmaybe-uninitialized] 1030 | double *X,*R,*l1,*l2,*l3=NULL,*beta,*g,*R0,xx,z,*d,*d1,*eta,*deta,v,*db=NULL,*dbp,*detacv,*dh,*b,alpha,alpha0,eps,*Rb,*ddbuf,*p0,*p3,*work; | ^~~~ In file included from ncv.c:30: mgcv.h:62:14: warning: 'ddbuf' may be used uninitialized [-Wmaybe-uninitialized] 62 | #define FREE R_chk_free ncv.c:1030:122: note: 'ddbuf' was declared here 1030 | double *X,*R,*l1,*l2,*l3=NULL,*beta,*g,*R0,xx,z,*d,*d1,*eta,*deta,v,*db=NULL,*dbp,*detacv,*dh,*b,alpha,alpha0,eps,*Rb,*ddbuf,*p0,*p3,*work; | ^~~~~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qp.c -o qp.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c soap.c -o soap.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sparse-smooth.c -o sparse-smooth.o sparse-smooth.c: In function 'sspl_apply': sparse-smooth.c:1673:24: warning: 'w2' may be used uninitialized [-Wmaybe-uninitialized] 1673 | if (!ok) { w[k] = sqrt(w2);y[k] /= w2;} | ^~~~~~~~ sparse-smooth.c:1667:36: note: 'w2' was declared here 1667 | *V0s,*V0c,*V1s,*V1c,*p,*p1,*p2,w2,*xx; | ^~ gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sparse.c -o sparse.o gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/local/include -fopenmp -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c tprs.c -o tprs.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o mgcv.so coxph.o davies.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o ncv.o qp.o soap.o sparse-smooth.o sparse.o tprs.o -lflexiblas -lflexiblas -L -L -lgfortran -lm -fopenmp -L/builddir/build/BUILD/R-4.3.1/lib -lR make[3]: Leaving directory '/tmp/RtmpTmEWa0/R.INSTALL2c84fc100236fe/mgcv/src' installing to /builddir/build/BUILD/R-4.3.1/library/mgcv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'mgcv' finding HTML links ... done Beta html FFdes html Predict.matrix html Predict.matrix.cr.smooth html Predict.matrix.soap.film html Rrank html Sl.initial.repara html Sl.repara html Sl.setup html Tweedie html XWXd html anova.gam html bam html bam.update html bandchol html blas.thread.test html bug.reports.mgcv html cSplineDes html chol.down html choose.k html cnorm html columb html concurvity html coxph html coxpht html dDeta html dpnorm html exclude.too.far html extract.lme.cov html factor.smooth html family.mgcv html fix.family.link html fixDependence html formXtViX html formula.gam html fs.test html full.score html gam html gam.check html gam.control html gam.convergence html gam.fit html gam.fit3 html gam.fit5.post.proc html gam.mh html gam.models html gam.outer html gam.reparam html gam.scale html gam.selection html gam.side html gam.vcomp html gam2objective html gamObject html gamSim html gamlss.etamu html gamlss.gH html gamm html gammals html gaulss html get.var html gevlss html ginla html gumbls html identifiability html in.out html inSide html influence.gam html initial.sp html interpret.gam html jagam html k.check html ldTweedie html ldetS html linear.functional.terms html logLik.gam html ls.size html magic html magic.post.proc html mgcv-FAQ html mgcv-package html mgcv-parallel html mini.roots html missing.data html model.matrix.gam html mono.con html mroot html multinom html mvn html negbin html new.name html notExp html notExp2 html null.space.dimension html ocat html one.se.rule html pcls html pdIdnot html pdTens html pen.edf html place.knots html plot.gam html polys.plot html predict.bam html predict.gam html print.gam html psum.chisq html qq.gam html rTweedie html random.effects html residuals.gam html rig html rmvn html s html scat html sdiag html shash html single.index html slanczos html smooth.construct html smooth.construct.ad.smooth.spec html smooth.construct.bs.smooth.spec html smooth.construct.cr.smooth.spec html smooth.construct.ds.smooth.spec html smooth.construct.fs.smooth.spec html smooth.construct.gp.smooth.spec html smooth.construct.mrf.smooth.spec html smooth.construct.ps.smooth.spec html smooth.construct.re.smooth.spec html smooth.construct.so.smooth.spec html smooth.construct.sos.smooth.spec html smooth.construct.sz.smooth.spec html smooth.construct.t2.smooth.spec html smooth.construct.tensor.smooth.spec html smooth.construct.tp.smooth.spec html smooth.info html smooth.terms html smooth2random html smoothCon html sp.vcov html spasm.construct html step.gam html summary.gam html t2 html te html tensor.prod.model.matrix html totalPenaltySpace html trichol html trind.generator html twlss html uniquecombs html vcov.gam html vis.gam html ziP html ziplss html ** building package indices ** testing if installed package can be loaded * DONE (mgcv) Making 'packages.html' ... done make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/Recommended' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library/Recommended' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' building/updating vignettes for package 'grid' ... building/updating vignettes for package 'parallel' ... building/updating vignettes for package 'utils' ... building/updating vignettes for package 'stats' ... processing 'reshape.Rnw' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1' configuring Java ... Java interpreter : /usr/bin/java Java version : 17.0.4.1 Java home path : /usr/lib/jvm/jre Java compiler : /usr/bin/javac Java headers gen.: Java archive tool: /usr/bin/jar trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm using C compiler: 'gcc (GCC) 13.1.1 20230511 (Red Hat 13.1.1-2)' make[2]: Entering directory '/tmp/Rjavareconf.RpP1TP' gcc -I"/builddir/build/BUILD/R-4.3.1/include" -DNDEBUG -I/usr/lib/jvm/jre/include -I/usr/lib/jvm/jre/include/linux -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c conftest.c -o conftest.o gcc -shared -L/builddir/build/BUILD/R-4.3.1/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o conftest.so conftest.o -L/usr/lib/jvm/jre/lib/server -ljvm -L/builddir/build/BUILD/R-4.3.1/lib -lR make[2]: Leaving directory '/tmp/Rjavareconf.RpP1TP' JAVA_HOME : /usr/lib/jvm/jre Java library path: $(JAVA_HOME)/lib/server JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm Updating Java configuration in /builddir/build/BUILD/R-4.3.1 Done. make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1' + cd src/nmath/standalone + make (cd ../../include; make Rmath.h) make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/include' make[1]: 'Rmath.h' is up to date. make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/include' Copying source files make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/nmath/standalone' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c making std_unif.d from std_unif.c make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/nmath/standalone' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mlutils.c -o mlutils.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c d1mach.c -o d1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c i1mach.c -o i1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmax2.c -o fmax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmin2.c -o fmin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fprec.c -o fprec.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fround.c -o fround.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ftrunc.c -o ftrunc.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sign.c -o sign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fsign.c -o fsign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imax2.c -o imax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imin2.c -o imin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chebyshev.c -o chebyshev.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c log1p.c -o log1p.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgammacor.c -o lgammacor.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gammalims.c -o gammalims.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stirlerr.c -o stirlerr.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bd0.c -o bd0.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma.c -o gamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgamma.c -o lgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c beta.c -o beta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lbeta.c -o lbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c polygamma.c -o polygamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cospi.c -o cospi.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_i.c -o bessel_i.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_j.c -o bessel_j.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_k.c -o bessel_k.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_y.c -o bessel_y.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c choose.c -o choose.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c snorm.c -o snorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sexp.c -o sexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgamma.c -o dgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgamma.c -o pgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgamma.c -o qgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgamma.c -o rgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbeta.c -o dbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbeta.c -o pbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbeta.c -o qbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbeta.c -o rbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dunif.c -o dunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c punif.c -o punif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qunif.c -o qunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c runif.c -o runif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnorm.c -o dnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnorm.c -o pnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnorm.c -o qnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnorm.c -o rnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlnorm.c -o dlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plnorm.c -o plnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlnorm.c -o qlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlnorm.c -o rlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c df.c -o df.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pf.c -o pf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qf.c -o qf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rf.c -o rf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnf.c -o dnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dt.c -o dt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pt.c -o pt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qt.c -o qt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rt.c -o rt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnt.c -o dnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dchisq.c -o dchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pchisq.c -o pchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qchisq.c -o qchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rchisq.c -o rchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnchisq.c -o rnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbinom.c -o dbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbinom.c -o pbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbinom.c -o qbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbinom.c -o rbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rmultinom.c -o rmultinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dcauchy.c -o dcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pcauchy.c -o pcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qcauchy.c -o qcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rcauchy.c -o rcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dexp.c -o dexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pexp.c -o pexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qexp.c -o qexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rexp.c -o rexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgeom.c -o dgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgeom.c -o pgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgeom.c -o qgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgeom.c -o rgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dhyper.c -o dhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c phyper.c -o phyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qhyper.c -o qhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rhyper.c -o rhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbinom.c -o dnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbinom.c -o pnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom.c -o qnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnbinom.c -o rnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dpois.c -o dpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ppois.c -o ppois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qpois.c -o qpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpois.c -o rpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dweibull.c -o dweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pweibull.c -o pweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qweibull.c -o qweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rweibull.c -o rweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlogis.c -o dlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plogis.c -o plogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlogis.c -o qlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlogis.c -o rlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnchisq.c -o dnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnchisq.c -o pnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnchisq.c -o qnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbeta.c -o dnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbeta.c -o pnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbeta.c -o qnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnf.c -o pnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnt.c -o pnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnf.c -o qnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnt.c -o qnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ptukey.c -o ptukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qtukey.c -o qtukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c toms708.c -o toms708.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c wilcox.c -o wilcox.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c signrank.c -o signrank.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c std_unif.c -o std_unif.o ar -cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o ranlib libRmath.a make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/nmath/standalone' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c mlutils.c -o mlutils.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c d1mach.c -o d1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c i1mach.c -o i1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmax2.c -o fmax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fmin2.c -o fmin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fprec.c -o fprec.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fround.c -o fround.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ftrunc.c -o ftrunc.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sign.c -o sign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c fsign.c -o fsign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imax2.c -o imax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c imin2.c -o imin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c chebyshev.c -o chebyshev.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c log1p.c -o log1p.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgammacor.c -o lgammacor.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gammalims.c -o gammalims.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c stirlerr.c -o stirlerr.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bd0.c -o bd0.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma.c -o gamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lgamma.c -o lgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c gamma_cody.c -o gamma_cody.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c beta.c -o beta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c lbeta.c -o lbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c polygamma.c -o polygamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c cospi.c -o cospi.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_i.c -o bessel_i.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_j.c -o bessel_j.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_k.c -o bessel_k.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c bessel_y.c -o bessel_y.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c choose.c -o choose.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c snorm.c -o snorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c sexp.c -o sexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgamma.c -o dgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgamma.c -o pgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgamma.c -o qgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgamma.c -o rgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbeta.c -o dbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbeta.c -o pbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbeta.c -o qbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbeta.c -o rbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dunif.c -o dunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c punif.c -o punif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qunif.c -o qunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c runif.c -o runif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnorm.c -o dnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnorm.c -o pnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnorm.c -o qnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnorm.c -o rnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlnorm.c -o dlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plnorm.c -o plnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlnorm.c -o qlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlnorm.c -o rlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c df.c -o df.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pf.c -o pf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qf.c -o qf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rf.c -o rf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnf.c -o dnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dt.c -o dt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pt.c -o pt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qt.c -o qt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rt.c -o rt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnt.c -o dnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dchisq.c -o dchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pchisq.c -o pchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qchisq.c -o qchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rchisq.c -o rchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnchisq.c -o rnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dbinom.c -o dbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pbinom.c -o pbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qbinom.c -o qbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rbinom.c -o rbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rmultinom.c -o rmultinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dcauchy.c -o dcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pcauchy.c -o pcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qcauchy.c -o qcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rcauchy.c -o rcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dexp.c -o dexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pexp.c -o pexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qexp.c -o qexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rexp.c -o rexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dgeom.c -o dgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pgeom.c -o pgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qgeom.c -o qgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rgeom.c -o rgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dhyper.c -o dhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c phyper.c -o phyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qhyper.c -o qhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rhyper.c -o rhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbinom.c -o dnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbinom.c -o pnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom.c -o qnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbinom_mu.c -o qnbinom_mu.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rnbinom.c -o rnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dpois.c -o dpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ppois.c -o ppois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qpois.c -o qpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rpois.c -o rpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dweibull.c -o dweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pweibull.c -o pweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qweibull.c -o qweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rweibull.c -o rweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dlogis.c -o dlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c plogis.c -o plogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qlogis.c -o qlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c rlogis.c -o rlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnchisq.c -o dnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnchisq.c -o pnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnchisq.c -o qnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c dnbeta.c -o dnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnbeta.c -o pnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnbeta.c -o qnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnf.c -o pnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c pnt.c -o pnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnf.c -o qnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qnt.c -o qnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c ptukey.c -o ptukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c qtukey.c -o qtukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c toms708.c -o toms708.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c wilcox.c -o wilcox.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c signrank.c -o signrank.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -I/usr/local/include -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -c std_unif.c -o std_unif.lo gcc -shared -fopenmp -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -o libRmath.so mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo qnbinom_mu.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/nmath/standalone' + make pdf make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/manual' creating doc/manual/version.tex collecting LaTeX docs for package 'base' ... 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Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'foreign' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'KernSmooth' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'rpart' ... Converting parsed Rd's to LaTeX .. collecting LaTeX docs for package 'class' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'nnet' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'spatial' ... Converting parsed Rd's to LaTeX .. collecting LaTeX docs for package 'mgcv' ... Converting parsed Rd's to LaTeX ............... PDF/LaTeX documentation: full reference index ... This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./fullrefman.tex LaTeX2e <2022-06-01> patch level 5 L3 programming layer <2022-12-17> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2021/10/04 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (../../share/texmf/tex/latex/Rd.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. 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(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (./version.tex) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/usr/share/texliv e/texmf-var/fonts/map/pdftex/updmap/pdftex.map}] No file fullrefman.toc. [1] [2] (./base-pkg.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) (/usr/share/texlive/texmf-dist/tex/latex/jknapltx/ursfs.fd) [3] [4] Underfull \hbox (badness 6252) in paragraph at lines 143--151 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 143--151 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [5] [6] [7] Underfull \hbox (badness 1178) in paragraph at lines 333--336 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [8] [9] [10] Underfull \hbox (badness 2556) in paragraph at lines 571--577 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [11] [12] [13] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [24] [25] [26] Underfull \hbox (badness 10000) in paragraph at lines 1611--1617 [27] [28] [29] [30] [31] Underfull \hbox (badness 1242) in paragraph at lines 2023--2026 []\T1/ptm/m/n/10 Since \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.3.0, the \T1/ptm/m/it/ 10 de-fault \T1/ptm/m/n/10 method will call []\T1/zi4/m/n/10 as.data.frame.vect or() []\T1/ptm/m/n/10 for atomic (as by Underfull \hbox (badness 10000) in paragraph at lines 2027--2031 []\T1/ptm/m/n/10 Direct calls to []\T1/zi4/m/n/10 as.data.frame.() []\T1 /ptm/m/n/10 are still pos-si-ble (base pack-age!), for Underfull \hbox (badness 5490) in paragraph at lines 2027--2031 \T1/ptm/m/n/10 12 atomic base classes, but will dep-re-cated (al-ready vis-i-bl y by set-ting en-vi-ron-ment Underfull \hbox (badness 10000) in paragraph at lines 2027--2031 \T1/ptm/m/n/10 vari-able []\T1/zi4/m/n/10 _R_CHECK_AS_DATA_FRAME_EXPLICIT_METHO D_ []\T1/ptm/m/n/10 to non-empty) where call-ing [32] [33] [34] [35] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2267--2267 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [36] [37] [38] [39] [40] [41] [42] [43] [44] Underfull \hbox (badness 1721) in paragraph at lines 2933--2937 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [45] [46] [47] [48] [49] [50] [51] Underfull \hbox (badness 2538) in paragraph at lines 3413--3416 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] Underfull \hbox (badness 10000) in paragraph at lines 4209--4211 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Underfull \hbox (badness 2521) in paragraph at lines 5505--5507 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6770--6770 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] Underfull \hbox (badness 1303) in paragraph at lines 7663--7670 []\T1/zi4/m/n/10 file []\T1/ptm/m/n/10 can be used with []\T1/zi4/m/n/10 descri ption = "clipboard" []\T1/ptm/m/n/10 in mode []\T1/zi4/m/n/10 "r" []\T1/ptm/m/n /10 only. This reads the Underfull \hbox (badness 2261) in paragraph at lines 7674--7679 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [112] [113] Underfull \vbox (badness 10000) has occurred while \output is active [114] [115] [116] [117] [118] [119] [120] [121] Underfull \hbox (badness 2096) in paragraph at lines 8353--8357 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [122] [123] Underfull \hbox (badness 2351) in paragraph at lines 8468--8471 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [124] [125] [126] [127] [128] Underfull \hbox (badness 4479) in paragraph at lines 8785--8796 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [129] [130] [131] [132] [133] Underfull \hbox (badness 1629) in paragraph at lines 9215--9227 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9215--9227 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1178) in paragraph at lines 10063--10067 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] Underfull \hbox (badness 2744) in paragraph at lines 12397--12399 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [179] [180] [181] [182] [183] [184] [185] Underfull \vbox (badness 10000) has occurred while \output is active [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] Underfull \hbox (badness 2253) in paragraph at lines 14601--14603 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. 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Co n-sider Underfull \hbox (badness 1466) in paragraph at lines 14918--14921 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [213] Underfull \vbox (badness 1418) has occurred while \output is active [214] Underfull \hbox (badness 10000) in paragraph at lines 15049--15053 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15060--15063 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [215] [216] [217] [218] Underfull \hbox (badness 3965) in paragraph at lines 15357--15361 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] Underfull \hbox (badness 4429) in paragraph at lines 16146--16149 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [231] Underfull \hbox (badness 10000) in paragraph at lines 16252--16254 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [232] Underfull \hbox (badness 2035) in paragraph at lines 16325--16329 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [233] [234] [235] [236] [237] [238] [239] [240] [241] Underfull \hbox (badness 2452) in paragraph at lines 16938--16942 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 16938--16942 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [242] [243] [244] Underfull \hbox (badness 1092) in paragraph at lines 17111--17116 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [245] [246] [247] Underfull \hbox (badness 6741) in paragraph at lines 17364--17368 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [248] [249] [250] Underfull \vbox (badness 10000) has occurred while \output is active [251] [252] [253] [254] [255] [256] [257] Underfull \vbox (badness 10000) has occurred while \output is active [258] Underfull \vbox (badness 10000) has occurred while \output is active [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] Underfull \hbox (badness 1478) in paragraph at lines 18857--18860 []\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [269] [270] [271] Underfull \hbox (badness 10000) in paragraph at lines 19127--19129 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / [272] Underfull \hbox (badness 2088) in paragraph at lines 19133--19142 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [273] [274] [275] [276] [277] [278] [279] [280] Underfull \hbox (badness 1442) in paragraph at lines 19741--19743 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [281] [282] [283] [284] [285] Underfull \hbox (badness 10000) in paragraph at lines 20074--20080 [286] [287] [288] Underfull \hbox (badness 1248) in paragraph at lines 20319--20322 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [289] [290] [291] [292] [293] Underfull \hbox (badness 4739) in paragraph at lines 20582--20584 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [294] [295] [296] [297] [298] [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] [309] Underfull \hbox (badness 2469) in paragraph at lines 21666--21671 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [310] Underfull \hbox (badness 1675) in paragraph at lines 21753--21762 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 21763--21776 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the [311] Underfull \hbox (badness 10000) in paragraph at lines 21811--21814 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21811--21814 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [312] [313] Underfull \hbox (badness 1014) in paragraph at lines 21945--21950 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [314] [315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325] Underfull \hbox (badness 1264) in paragraph at lines 22792--22800 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: Underfull \hbox (badness 4441) in paragraph at lines 22826--22829 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] Underfull \hbox (badness 5231) in paragraph at lines 23631--23633 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [338] [339] [340] [341] [342] [343] [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] Underfull \hbox (badness 10000) in paragraph at lines 24724--24730 [][]$\T1/zi4/m/n/10 https : / / zlib . net/$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m /n/10 https : / / en . wikipedia . org / wiki / Gzip$[][]\T1/ptm/m/n/10 , [][]$ \T1/zi4/m/n/10 http : / / www . bzip . org/$[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 24724--24730 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , [][]$\T1/zi4/m/n/10 https : / / tukaani . org / xz/$[][] \T1/ptm/m/n/ 10 and [][]$\T1/zi4/m/n/10 https : [354] [355] [356] [357] [358] [359] [360] Underfull \hbox (badness 2790) in paragraph at lines 25220--25223 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25220--25223 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [361] [362] [363] [364] [365] Underfull \hbox (badness 1194) in paragraph at lines 25543--25546 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [366] [367] [368] Underfull \hbox (badness 2368) in paragraph at lines 25750--25756 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [369] [370] [371] [372] [373] Underfull \hbox (badness 10000) in paragraph at lines 26140--26143 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [374] [375] [376] [377] [378] [379] [380] [381] [382] Underfull \hbox (badness 10000) in paragraph at lines 26761--26763 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [383] [384] [385] [386] [387] [388] [389] Underfull \hbox (badness 2443) in paragraph at lines 27249--27257 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 1881) in paragraph at lines 27667--27670 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 27692--27694 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [396] [397] Underfull \hbox (badness 2142) in paragraph at lines 27833--27837 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 27890--27895 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [398] [399] [400] Underfull \hbox (badness 10000) in paragraph at lines 28184--28190 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28184--28190 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28184--28190 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 10000) in paragraph at lines 28197--28200 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence[][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/pt m/m/n/10 and [401] Underfull \hbox (badness 2689) in paragraph at lines 28223--28225 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see Underfull \hbox (badness 10000) in paragraph at lines 28265--28270 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28271--28282 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28271--28282 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28283--28286 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [402] [403] [404] [405] [406] [407] Underfull \hbox (badness 10000) in paragraph at lines 28692--28696 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 28839--28842 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [410] Underfull \hbox (badness 7925) in paragraph at lines 28920--28924 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 28920--28924 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 28925--28934 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [411] [412] [413] [414] [415] [416] [417] [418] [419] [420] [421] [422] [423] [424] Underfull \hbox (badness 2726) in paragraph at lines 29929--29932 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [425] [426] [427] [428] [429] [430] [431] [432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] Underfull \vbox (badness 10000) has occurred while \output is active [443] [444] [445] [446] [447] [448] [449] [450] Underfull \hbox (badness 1533) in paragraph at lines 31726--31729 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [451] [452] [453] Underfull \hbox (badness 1163) in paragraph at lines 31889--31900 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] Underfull \hbox (badness 10000) in paragraph at lines 33555--33559 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 33555--33559 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 33576--33578 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 33579--33583 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [478] [479] [480] [481] [482] [483] [484] [485] [486] Underfull \hbox (badness 1655) in paragraph at lines 34175--34177 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [487] [488] [489] [490] [491] [492] [493] [494] [495] [496] [497] [498] [499] [500] [501] [502] [503] [504] Underfull \hbox (badness 2261) in paragraph at lines 35381--35386 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [505] [506] [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] Underfull \hbox (badness 3668) in paragraph at lines 36416--36420 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [519] Underfull \hbox (badness 10000) in paragraph at lines 36507--36518 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530] [531] [532] [533] [534] [535] [536] Underfull \vbox (badness 10000) has occurred while \output is active [537] [538] [539] [540] [541] Underfull \hbox (badness 10000) in paragraph at lines 38052--38054 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [542] Underfull \vbox (badness 10000) has occurred while \output is active [543] [544] [545] [546] [547] Underfull \hbox (badness 2913) in paragraph at lines 38472--38476 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [548] [549] [550] Underfull \hbox (badness 1072) in paragraph at lines 38718--38722 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 38723--38727 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', [551] Underfull \hbox (badness 10000) in paragraph at lines 38763--38769 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 38763--38769 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 38763--38769 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 38778--38785 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 38778--38785 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 38778--38785 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 38778--38785 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [552] [553] [554] Underfull \hbox (badness 2644) in paragraph at lines 39013--39017 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [555] [556] [557] Underfull \hbox (badness 1142) in paragraph at lines 39170--39176 []\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the []\T1/zi4/m/n/10 fo rmat []\T1/ptm/m/n/10 meth-ods is []\T1/zi4/m/n/10 "%Y-%m-%d [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] [570] [571] [572] [573] [574] [575] [576] Underfull \hbox (badness 1158) in paragraph at lines 40529--40531 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] Underfull \hbox (badness 1137) in paragraph at lines 41124--41130 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41143--41148 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [587] Underfull \hbox (badness 1616) in paragraph at lines 41263--41268 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [588] [589] [590] [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 1472) in paragraph at lines 41810--41813 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [597] [598] [599] [600] [601] [602] [603] [604] [605] [606] [607] [608] [609] Underfull \hbox (badness 10000) in paragraph at lines 42736--42740 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/n/10 bin []\T1/ptm/m/n/10 can have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4/ m/n/10 length(bin) > [610] [611] [612] [613] Underfull \hbox (badness 10000) in paragraph at lines 42995--42998 [][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [ ][]$https : / / developer . r-[]project . org / [614] [615] [616] Underfull \hbox (badness 10000) in paragraph at lines 43179--43183 [][][]\T1/zi4/m/n/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 taskCallback Manager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer . [617] [618] [619] [620] [621] [622] [623] [624] Underfull \hbox (badness 10000) in paragraph at lines 43828--43831 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[ ]zones / [625] [626] [627] [628] [629] [630] Underfull \vbox (badness 10000) has occurred while \output is active [631] [632] [633] [634] [635] [636] [637] Underfull \hbox (badness 1990) in paragraph at lines 44749--44757 []\T1/zi4/m/n/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 44749--44757 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/n/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [638] [639] [640] [641] [642] [643] [644] [645] [646] [647] [648] [649] [650] [651] [652] Underfull \hbox (badness 2452) in paragraph at lines 45746--45752 [][][]\T1/zi4/m/n/10 file[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.acc ess[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.append[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/n/10 file.copy[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 file.create[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.exists[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [653] [654] [655] [656] [657] Underfull \hbox (badness 3668) in paragraph at lines 46144--46146 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di- ately, even if [658] [659] Underfull \hbox (badness 2401) in paragraph at lines 46274--46278 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/n/10 options[][][]("w arn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [660] [661] Underfull \hbox (badness 3492) in paragraph at lines 46398--46400 []\T1/zi4/m/n/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 months []\T1/pt m/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [662] Underfull \hbox (badness 2111) in paragraph at lines 46484--46489 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/n/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [663] [664] [665] [666] Underfull \hbox (badness 4001) in paragraph at lines 46730--46732 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/n/10 https : / / developer . [667] [668] [669] [670] [671] Underfull \hbox (badness 5417) in paragraph at lines 47095--47099 []\T1/zi4/m/n/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-ren tly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [672] Underfull \hbox (badness 10000) in paragraph at lines 47156--47160 []\T1/zi4/m/n/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-da rd' reg-exps, in-clud-ing el-e-ments named [673]) (./compiler-pkg.tex [674] Chapter 2. [675] [676] [677] [678]) (./datasets-pkg.tex Chapter 3. [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] [690] [691] [692] [693] [694] Underfull \hbox (badness 1097) in paragraph at lines 1037--1041 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [695] [696] [697] [698] [699] [700] [701] [702] [703] [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] [727] [728] [729] [730] [731] [732] [733] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3508--3508 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [734] [735] [736] [737] [738] [739] [740] [741] [742] [743] [744] [745] [746] [747] [748] [749] [750] [751] [752] [753] [754]) (./grDevices-pkg.tex Chapter 4. [755] [756] [757] [758] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/n/10 c(mi, ma, n.)[]\ T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 298--303 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/n/10 axisTicks[][][]() []\T1/ ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/n/10 CreateAtVector() []\T1/p tm/m/n/10 in Underfull \hbox (badness 1852) in paragraph at lines 298--303 \T1/ptm/m/n/10 `\T1/zi4/m/n/10 /src/main/plot.c\T1/ptm/m/n/10 ' which is also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t ion [759] [760] [761] [762] [763] [764] [765] [766] [767] Underfull \hbox (badness 1424) in paragraph at lines 899--901 [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) an d []\T1/zi4/m/n/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i-fied as [768] [769] [770] [771] [772] Underfull \hbox (badness 5175) in paragraph at lines 1193--1195 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [773] [774] Underfull \hbox (badness 2512) in paragraph at lines 1312--1314 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/n/10 https : / / web . arc hive . org / web / 20190613001950 / http : / / efg2 . com / [775] [776] [777] [778] Underfull \hbox (badness 1490) in paragraph at lines 1612--1617 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/n/10 rasterImage[][][] []\T1/ptm/m/n/10 and [ ][][]\T1/zi4/m/n/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues []\T 1/zi4/m/n/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1625--1629 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [779] [780] [781] [782] [783] [784] Underfull \hbox (badness 1325) in paragraph at lines 2040--2050 []\T1/zi4/m/n/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngmono"[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngalph a"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/1 0 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp32b"[]\T1/ptm/m/n/10 , [785] [786] Underfull \hbox (badness 10000) in paragraph at lines 2152--2154 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [787] [788] Underfull \hbox (badness 6758) in paragraph at lines 2338--2341 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [789] [790] [791] [792] Underfull \vbox (badness 10000) has occurred while \output is active [793] [794] [795] [796] [797] [798] [799] [800] Underfull \hbox (badness 10000) in paragraph at lines 3089--3090 [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] [812] [813] [814] [815] Underfull \vbox (badness 10000) has occurred while \output is active [816] Underfull \hbox (badness 10000) in paragraph at lines 4165--4168 []\T1/ptm/m/n/10 For use with []\T1/zi4/m/n/10 onefile = FALSE []\T1/ptm/m/n/10 give a C in-te-ger for-mat such as [817] [818] [819] [820] [821] [822] [823] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4681 \aliasA{symbol}{plotmath}{symbol} [824] [825] [826] [827] Underfull \vbox (badness 10000) has occurred while \output is active [828] [829] Underfull \hbox (badness 1584) in paragraph at lines 5067--5069 []\T1/ptm/m/n/10 For type []\T1/zi4/m/n/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1/ zi4/m/n/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5071--5078 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [830] [831] [832] [833] Underfull \hbox (badness 1377) in paragraph at lines 5379--5384 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [834] Underfull \hbox (badness 1418) in paragraph at lines 5455--5462 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\ T1/zi4/m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m /n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvet ica-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 1755) in paragraph at lines 5473--5475 []\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East Asian lan-guages -- see [835] Underfull \hbox (badness 1377) in paragraph at lines 5584--5589 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/n/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [836] Underfull \hbox (badness 7344) in paragraph at lines 5653--5655 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [837] [838] Underfull \hbox (badness 2035) in paragraph at lines 5791--5800 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5791--5800 \T1/ptm/m/n/10 vided: []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica-Na rrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5791--5800 []\T1/zi4/m/n/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Pal atino" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 "Times"[]\T1/ptm/m/n/10 ; []\T1/zi 4/m/n/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "URWBookman"[]\T1/ptm/m /n/10 , [839] [840] Underfull \hbox (badness 10000) in paragraph at lines 5859--5861 []\T1/zi4/m/n/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/z i4/m/n/10 https : / / ftp . gnu . org / pub / non-[]gnu / [841] [842] Underfull \hbox (badness 1546) in paragraph at lines 6004--6012 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/n/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 title[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fg[]\T1/ptm/m/n/10 , [] \T1/zi4/m/n/10 width[]\T1/ptm/m/n/10 , [843] [844] [845] [846] [847] [848] [849] [850] Underfull \hbox (badness 10000) in paragraph at lines 6543--6546 []\T1/zi4/m/n/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space (r ed/green/blue) into HSV space [851] [852] [853] [854] [855] [856] [857] [858] [859] [860] [861] [862] Underfull \hbox (badness 1189) in paragraph at lines 7372--7374 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [863] Underfull \hbox (badness 10000) in paragraph at lines 7477--7479 []\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for CJ K lan-guages and [864] [865] [866] [867] [868] Underfull \hbox (badness 3780) in paragraph at lines 7791--7797 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/n /10 "AvantGarde"[]\T1/ptm/m/n/10 , [869] [870] [871] [872] [873]) (./graphics-pkg.tex [874] Chapter 5. [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] [887] [888] [889] [890] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1034--1034 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [891] [892] [893] [894] [895] Underfull \hbox (badness 4634) in paragraph at lines 1408--1411 [][][]\T1/zi4/m/n/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready work s nowa-days with data.frames; [][][]\T1/zi4/m/n/10 boxplot.formula[][][][]\T1/p tm/m/n/10 , [896] [897] [898] [899] [900] [901] [902] [903] [904] [905] [906] [907] [908] [909] [910] [911] Underfull \hbox (badness 1728) in paragraph at lines 2388--2390 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/n/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [912] Underfull \hbox (badness 1009) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [913] [914] [915] [916] [917] [918] [919] [920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931] [932] [933] Underfull \vbox (badness 10000) has occurred while \output is active [934] Underfull \vbox (badness 10000) has occurred while \output is active [935] [936] [937] [938] [939] [940] [941] [942] [943] [944] [945] [946] Underfull \hbox (badness 3229) in paragraph at lines 4715--4720 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [947] [948] [949] [950] [951] Underfull \hbox (badness 1107) in paragraph at lines 5144--5150 []\T1/ptm/m/n/10 is []\T1/zi4/m/n/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sca led to user co-or-di-nates. Note that []\T1/zi4/m/n/10 c([][]strwidth[][][](ch) , [952] Underfull \hbox (badness 10000) in paragraph at lines 5273--5276 [953] Underfull \hbox (badness 10000) in paragraph at lines 5334--5336 [954 ] [955 ] [956] [957] [958] [959] [960] [961] [962] [963] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6005 \aliasA{plot}{plot.default}{plot} [964] [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] [976] [977] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6909--6910 [][] [978 ] [979] [980] [981] [982] [983] [984] [985] [986] [987] [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] Underfull \hbox (badness 4954) in paragraph at lines 9001--9003 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /n/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9003--9005 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/n/10 par (c("font.lab", "cex.lab", [1010] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9083 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9083 \HeaderA{units}{Graphical Units}{units} [1011] [1012] [1013] [1014]) (./grid-pkg.tex Chapter 6. [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] Underfull \hbox (badness 2680) in paragraph at lines 550--553 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/n/10 preDrawDetails []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal-c u-la-tion of [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] Underfull \hbox (badness 4279) in paragraph at lines 1187--1196 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/n/10 pushViewport[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/n/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 seekViewpo rt[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 upViewport[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 unit[][][][]\T1/ptm/m/n/10 , [1033] Underfull \vbox (badness 10000) has occurred while \output is active [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] [1043] [1044] [1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] [1062] Underfull \hbox (badness 10000) in paragraph at lines 3102--3104 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] [1076] [1077] Underfull \vbox (badness 10000) has occurred while \output is active [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] Underfull \hbox (badness 1067) in paragraph at lines 4840--4843 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1091] [1092] [1093] [1094] [1095] Underfull \hbox (badness 7256) in paragraph at lines 5191--5193 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1096] [1097] [1098] [1099] [1100] [1101] [1102] Underfull \hbox (badness 2142) in paragraph at lines 5645--5649 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/n/10 gridGTreeCoords []\T1/ptm/m/n/1 0 a list of ei-ther []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1103] [1104] Underfull \hbox (badness 4699) in paragraph at lines 5727--5732 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 ob -ject (a list of lists with com-po-nents []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 an d []\T1/zi4/m/n/10 y[]\T1/ptm/m/n/10 ) or a [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112] [1113] [1114] [1115] [1116] [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134]) (./methods-pkg.tex Chapter 7. [1135] [1136] [1137] [1138] [1139] [1140] [1141] [1142] Underfull \vbox (badness 10000) has occurred while \output is active [1143] Underfull \vbox (badness 10000) has occurred while \output is active [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] Underfull \hbox (badness 2237) in paragraph at lines 1385--1387 []\T1/ptm/m/n/10 The class []\T1/zi4/m/n/10 "className" []\T1/ptm/m/n/10 ex-ten ds []\T1/zi4/m/n/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/n/1 0 "package"[]\T1/ptm/m/n/10 , also of class [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] Underfull \hbox (badness 10000) in paragraph at lines 1981--1986 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m/n/ 10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1981--1986 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m /n/10 it calls []\T1/zi4/m/n/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1161] [1162] [1163] Underfull \hbox (badness 2213) in paragraph at lines 2213--2218 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/n/10 where = [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 2573--2576 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/n/10 setGeneric[][][] []\ T1/ptm/m/n/10 and [][][]\T1/zi4/m/n/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 c re-ate ob-jects of class [1169] [1170] Underfull \hbox (badness 1132) in paragraph at lines 2713--2717 []\T1/ptm/m/n/10 In []\T1/zi4/m/n/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi4 /m/n/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/n/10 package []\T1/ptm/m/n/10 sl ot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2745--2750 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/n/10 removeGeneric []\T1/ptm/m/n/10 r e-moves the func-tion it-self; []\T1/zi4/m/n/10 removeMethods []\T1/ptm/m/n/10 re-stores the [1171] [1172] [1173] [1174] [1175] [1176] [1177] Underfull \hbox (badness 1102) in paragraph at lines 3302--3304 []\T1/zi4/m/n/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1178] [1179] [1180] [1181] [1182] Underfull \hbox (badness 10000) in paragraph at lines 3641--3650 []\T1/ptm/m/n/10 The [1183] [1184] Underfull \hbox (badness 10000) in paragraph at lines 3761--3762 [] \T1/zi4/m/n/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longit ude = "numeric", [1185] Underfull \hbox (badness 10000) in paragraph at lines 3845--3846 []\T1/zi4/m/n/10 Currency <- setClass("Currency", slots = c(unit = "character") , contains = [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] Underfull \hbox (badness 1769) in paragraph at lines 4476--4482 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/n/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4476--4482 []\T1/zi4/m/n/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [] [][]\T1/zi4/m/n/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion use d by [1194] [1195] [1196] [1197] [1198] [1199] [1200] [1201] [1202] Underfull \vbox (badness 10000) has occurred while \output is active [1203] Underfull \vbox (badness 10000) has occurred while \output is active [1204] [1205] [1206] Underfull \hbox (badness 4036) in paragraph at lines 5445--5448 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/n/10 "PossibleMethod" []\T1/ptm/m/ n/10 the method to use in re-sponse to a [1207] Underfull \hbox (badness 3803) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1208] [1209] [1210] Underfull \hbox (badness 1087) in paragraph at lines 5752--5757 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1211] [1212] [1213] [1214] [1215] [1216] [1217] [1218] Underfull \hbox (badness 1675) in paragraph at lines 6459--6465 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/n/10 externalRef Method(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1219] [1220] [1221] [1222] Underfull \vbox (badness 10000) has occurred while \output is active [1223] [1224] [1225] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6981 \aliasA{S4}{S3Part}{S4} [1226] [1227] [1228] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7237 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7239 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7240 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7242 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7243 \aliasA{Summary}{S4groupGeneric}{Summary} [1229] Underfull \hbox (badness 2050) in paragraph at lines 7304--7308 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1230] [1231] Underfull \hbox (badness 1286) in paragraph at lines 7492--7494 []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 .selectSuperClasses() []\T1/ptm/m/n/10 on ly, a [][][]\T1/zi4/m/n/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, t yp-i-cally [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] Underfull \hbox (badness 1852) in paragraph at lines 10572--10576 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1272] [1273] [1274]) (./parallel-pkg.tex Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [][] RNG[][][]: see [1275] [1276] [1277] [1278] Underfull \hbox (badness 1320) in paragraph at lines 301--304 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1279] [1280] [1281] [1282] [1283] [1284] [1285] [1286] [1287] [1288] [1289] [1290] [1291] [1292] [1293] [1294] Underfull \hbox (badness 3386) in paragraph at lines 1394--1397 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/n/10 .Random.seed []\T1/ptm/m/n/10 when the [1295] [1296] [1297]) (./splines-pkg.tex [1298] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 \T1/ptm/ m/n/10 and William N. Ven-ables [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] [1311] [1312]) (./stats-pkg.tex Chapter 10. [1313] [1314] [1315] [1316] [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325] Underfull \hbox (badness 1412) in paragraph at lines 892--894 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/n/10 l m []\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 aov[]\T1/ptm/m/n/10 , or a for-mula for [1326] [1327] [1328] [1329] [1330] [1331] [1332] Underfull \hbox (badness 2503) in paragraph at lines 1374--1377 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1333] [1334] [1335] [1336] [1337] [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] [1346] [1347] [1348] [1349] [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] Underfull \hbox (badness 2503) in paragraph at lines 3537--3540 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1365] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3649. [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] [1379] [1380] [1381] [1382] [1383] Underfull \hbox (badness 3989) in paragraph at lines 4794--4801 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 2556) in paragraph at lines 5435--5438 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/n/10 "circular"[] \T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "fi lter"[]\T1/ptm/m/n/10 . For [1393] [1394] [1395] [1396] [1397] [1398] Underfull \hbox (badness 2503) in paragraph at lines 5849--5853 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1399] [1400] [1401] [1402] [1403] [1404] [1405] [1406] [1407] [1408] [1409] [1410] Underfull \hbox (badness 7081) in paragraph at lines 6643--6646 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/n/10 "hclust" []\T1/ptm/m/n/10 ca n be con-verted to class []\T1/zi4/m/n/10 "dendrogram" []\T1/ptm/m/n/10 us-ing method Underfull \hbox (badness 10000) in paragraph at lines 6647--6649 []\T1/zi4/m/n/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro-g ram []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1411] Underfull \vbox (badness 10000) has occurred while \output is active [1412] [1413] [1414] [1415] Underfull \vbox (badness 10000) has occurred while \output is active [1416] [1417] [1418] Underfull \vbox (badness 10000) has occurred while \output is active [1419] [1420] [1421] [1422] [1423] Underfull \hbox (badness 10000) in paragraph at lines 7522--7525 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/n/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1424] [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] Underfull \vbox (badness 10000) has occurred while \output is active [1444] [1445] [1446] [1447] [1448] Underfull \hbox (badness 2626) in paragraph at lines 9217--9220 []\T1/ptm/m/n/10 Either []\T1/zi4/m/n/10 "convolution" []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1449] [1450] Underfull \hbox (badness 2503) in paragraph at lines 9324--9328 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1451] [1452] [1453] [1454] [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] [1463] [1464] [1465] [1466] [1467] [1468] [1469] Underfull \hbox (badness 4518) in paragraph at lines 10676--10681 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1470] [1471] [1472] [1473] [1474] Underfull \hbox (badness 2142) in paragraph at lines 11037--11040 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11056--11059 []\T1/ptm/m/n/10 When []\T1/zi4/m/n/10 trace []\T1/ptm/m/n/10 is true, calls to [][][]\T1/zi4/m/n/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-er-a-tion. Hence, [1475] Underfull \hbox (badness 1708) in paragraph at lines 11118--11122 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1476] [1477] [1478] [1479] [1480] Underfull \hbox (badness 1694) in paragraph at lines 11514--11517 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.11995 \aliasA{hat}{influence.measures}{hat} [1489] [1490] Underfull \hbox (badness 1484) in paragraph at lines 12137--12139 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/n/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1491] [1492] [1493] [1494] [1495] [1496] [1497] [1498] [1499] Underfull \hbox (badness 10000) in paragraph at lines 12739--12741 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/n/10 solve.de fault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/n/10 SSinit = [1500] [1501] [1502] [1503] [1504] Underfull \hbox (badness 2894) in paragraph at lines 13075--13079 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1505] [1506] [1507] [1508] [1509] [1510] Underfull \hbox (badness 1496) in paragraph at lines 13498--13504 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 4518) in paragraph at lines 13896--13901 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 4518) in paragraph at lines 14556--14561 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1527] [1528] Underfull \hbox (badness 6412) in paragraph at lines 14694--14698 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/n/10 (surface = "inte rpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14701--14703 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/n/10 family []\T1/ptm/m/n/10 is [1529] [1530] [1531] [1532] [1533] [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] Underfull \hbox (badness 2503) in paragraph at lines 15777--15781 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1546] [1547] [1548] [1549] [1550] [1551] [1552] Underfull \hbox (badness 10000) in paragraph at lines 16289--16295 []\T1/zi4/m/n/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/n/ 10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16289--16295 []\T1/zi4/m/n/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 model.re sponse(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/n/10 model.offset []\T1/ ptm/m/n/10 sums any terms [1553] [1554] [1555] [1556] [1557] [1558] [1559] [1560] [1561] [1562] [1563] [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] [1577] Underfull \hbox (badness 1158) in paragraph at lines 17944--17947 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/n/10 nls []\T1 /ptm/m/n/10 as the data ar-gu-ment. The ac- [1578] [1579] Underfull \vbox (badness 10000) has occurred while \output is active [1580] Underfull \vbox (badness 10000) has occurred while \output is active [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] [1589] [1590] [1591] [1592] [1593] Underfull \hbox (badness 1377) in paragraph at lines 18978--18983 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 18983--18986 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 18996--19000 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 18996--19000 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/n/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19004--19008 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/n/10 "BFGS"[]\T 1/ptm/m/n/10 , []\T1/zi4/m/n/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/1 0 "SANN" []\T1/ptm/m/n/10 meth-ods if [1594] [1595] [1596] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19229--19229 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Underfull \vbox (badness 10000) has occurred while \output is active [1597] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19232--19232 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1598] [1599] [1600] [1601] [1602] [1603] Underfull \hbox (badness 1337) in paragraph at lines 19691--19694 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1604] [1605] [1606] [1607] [1608] [1609] [1610] [1611] Underfull \hbox (badness 10000) in paragraph at lines 20162--20168 \T1/zi4/m/n/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 s distance", lty = cook.lty, col = cook.col, text.col [1612] [1613] [1614] [1615] [1616] Underfull \hbox (badness 1194) in paragraph at lines 20500--20503 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1617] [1618] [1619] [1620] [1621] [1622] [1623] Underfull \hbox (badness 2503) in paragraph at lines 20879--20882 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 20906--20908 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/n/10 "Exact Poisson test" [ ]\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 "Comparison of Poisson [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] Underfull \hbox (badness 10000) in paragraph at lines 21985--21991 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/n/10 predict.ar[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 predict.Arima[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1640] [1641] [1642] [1643] [1644] [1645] [1646] [1647] [1648] [1649] [1650] [1651] [1652] [1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 1337) in paragraph at lines 23383--23389 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] Underfull \hbox (badness 1436) in paragraph at lines 23873--23876 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/n/10 max(2, [1670] Underfull \hbox (badness 10000) in paragraph at lines 24014--24015 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . or g / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1671] [1672] [1673] [1674] [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] Underfull \hbox (badness 1824) in paragraph at lines 24986--24992 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 are f irst re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 24986--24992 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25007--25010 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/n/10 y = r unmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/n/10 y[j] = [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \vbox (badness 10000) has occurred while \output is active [1693] [1694] Underfull \hbox (badness 2165) in paragraph at lines 25589--25594 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/n/10 "selfStart" []\T1 /ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/n/10 SSasymp[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1695] [1696] [1697] Underfull \hbox (badness 1867) in paragraph at lines 25799--25801 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 25815--25819 []\T1/ptm/m/n/10 where []\T1/zi4/m/n/10 NN <- [][]nobs[][][](object, use.fallba ck = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 PP <- [1698] [1699] [1700] [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] Underfull \vbox (badness 10000) has occurred while \output is active [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] Underfull \vbox (badness 10000) has occurred while \output is active [1721] [1722] Underfull \hbox (badness 3514) in paragraph at lines 27476--27481 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1723] [1724] [1725] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27710--27710 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1726] Underfull \hbox (badness 3514) in paragraph at lines 27746--27752 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1727] Overfull \hbox (20.23795pt too wide) in paragraph at lines 27803--27803 []\T1/zi4/m/n/9 fmX1 <- nls(conc ~ SSbiexp(time, A1, lrc1, A2, lrc2), data = d atN, control = list(scaleOffset=1))[] Overfull \hbox (11.22874pt too wide) in paragraph at lines 27805--27805 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol=1 e-11, nDcentral=TRUE), trace=TRUE)[] [1728] [1729] [1730] Underfull \hbox (badness 3514) in paragraph at lines 27979--27984 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1731] Underfull \hbox (badness 3514) in paragraph at lines 28066--28071 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1732] Underfull \hbox (badness 3514) in paragraph at lines 28131--28136 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1733] [1734] Underfull \hbox (badness 3514) in paragraph at lines 28225--28230 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1735] Underfull \hbox (badness 6691) in paragraph at lines 28317--28322 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 x[]\ T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] Underfull \hbox (badness 4024) in paragraph at lines 28808--28811 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1744] [1745] [1746] [1747] [1748] [1749] [1750] [1751] [1752] Underfull \hbox (badness 5431) in paragraph at lines 29417--29419 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1753] [1754] [1755] [1756] Underfull \hbox (badness 5431) in paragraph at lines 29627--29630 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1757] [1758] [1759] [1760] [1761] Underfull \hbox (badness 1337) in paragraph at lines 29942--29946 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1762] [1763] [1764] [1765] Underfull \hbox (badness 1616) in paragraph at lines 30261--30264 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1766] [1767] [1768] [1769] [1770] [1771] [1772] [1773] [1774] [1775] [1776] [1777] [1778] [1779] [1780] [1781] [1782] [1783] [1784] Underfull \hbox (badness 3557) in paragraph at lines 31485--31489 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/n/10 extendInt []\T1/ptm/m/n/10 to a non-[ ]\T1/zi4/m/n/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-rect []\T1/zi4/m/n/10 interval = [1785] [1786] [1787] [1788] [1789] [1790] Underfull \hbox (badness 1337) in paragraph at lines 31852--31856 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1791] [1792] [1793] [1794] [1795] [1796] [1797] [1798] Underfull \hbox (badness 1337) in paragraph at lines 32381--32385 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1799] [1800] [1801] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32589--32589 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1802] [1803] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32750--32750 [] \T1/zi4/m/n/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.eps = getOption("ts.eps"), ...)[] [1804] [1805] [1806] [1807] [1808]) (./stats4-pkg.tex Chapter 11. [1809] [1810] [1811] Underfull \vbox (badness 10000) has occurred while \output is active [1812] [1813] [1814] [1815] [1816] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1817] [1818] [1819]) (./tcltk-pkg.tex [1820] Chapter 12. [1821] [1822] [1823] [1824] [1825] [1826] [1827] Underfull \vbox (badness 10000) has occurred while \output is active [1828] Underfull \hbox (badness 1546) in paragraph at lines 671--678 []\T1/zi4/m/n/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-i ng any Tk or Tcl com-mand by sim-ply run-ning [1829] [1830] [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840]) (./tools-pkg.tex Chapter 13. [1841] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1842] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/n/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing will be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1843] [1844] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/n/10 bi bentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatIn Proceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatManual[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/n/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatPhdthesis[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1/zi 4/m/n/10 formatTechreport []\T1/ptm/m/n/10 and [1845] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gin e to use. Over-rides any [1846] [1847] Underfull \hbox (badness 1142) in paragraph at lines 464--468 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1848] [1849] [1850] [1851] [1852] [1853] [1854] [1855] [1856] [1857] [1858] Underfull \hbox (badness 1014) in paragraph at lines 1188--1190 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1194--1196 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [1859] Underfull \hbox (badness 10000) in paragraph at lines 1231--1234 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1231--1234 []\T1/zi4/m/n/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and [ ]\T1/zi4/m/n/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1860] [1861] [1862] [1863] [1864] Underfull \hbox (badness 10000) in paragraph at lines 1606--1609 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/n/10 CRAN_aliases_db[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CR AN_current_db []\T1/ptm/m/n/10 and [1865] [1866] Underfull \hbox (badness 4096) in paragraph at lines 1725--1733 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1735--1737 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1867] [1868] [1869] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1937 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.1938 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1870] [1871] [1872] [1873] [1874] [1875] [1876] Underfull \hbox (badness 3386) in paragraph at lines 2412--2415 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/n/10 as.Rconcordance []\T1/ ptm/m/n/10 searches for strings match-ing the pat-tern of [1877] [1878] Underfull \hbox (badness 4096) in paragraph at lines 2552--2560 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1879] [1880] [1881] [1882] [1883] [1884] [1885] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 3046. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 3047. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 3047. [1886] [1887] [1888] [1889] [1890] Underfull \hbox (badness 1424) in paragraph at lines 3358--3360 []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1891] [1892] [1893] [1894] [1895] [1896] [1897] [1898] [1899] [1900] Underfull \hbox (badness 10000) in paragraph at lines 4074--4076 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1901] [1902] Underfull \hbox (badness 10000) in paragraph at lines 4213--4216 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/it/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/it/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1903] [1904] [1905] [1906] [1907] Underfull \hbox (badness 1796) in paragraph at lines 4571--4576 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/it/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/it/10 type = = [1908] Underfull \hbox (badness 4699) in paragraph at lines 4621--4625 []\T1/ptm/m/n/10 a string, by de-fault empty, of op-tions to []\T1/zi4/m/it/10 msgmerge []\T1/ptm/m/n/10 in ad-di-tion to Underfull \hbox (badness 1946) in paragraph at lines 4621--4625 []\T1/zi4/m/it/10 "--update"[]\T1/ptm/m/n/10 . Since \T1/phv/m/n/10 R \T1/ptm/m /n/10 4.2.0, []\T1/zi4/m/it/10 "--no-wrap" []\T1/ptm/m/n/10 is used when called from [1909] Underfull \hbox (badness 1838) in paragraph at lines 4649--4655 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4649--4655 \T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1910] [1911] [1912] Underfull \hbox (badness 2197) in paragraph at lines 4922--4932 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/it/10 available.packages[][][][]\T1/ptm/m/n/10 : [1913] Underfull \hbox (badness 1571) in paragraph at lines 4988--4992 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1914] [1915] [1916] [1917]) (./utils-pkg.tex [1918] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/it/10 insertions[]\T1/ptm/m/n/10 ', [1919] [1920] [1921] [1922] [1923] [1924] [1925] [1926] [1927] [1928] [1929] Underfull \hbox (badness 10000) in paragraph at lines 729--735 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/it/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/it/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 729--735 []\T1/zi4/m/it/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1930] [1931] Underfull \hbox (badness 3861) in paragraph at lines 934--939 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/it/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/it/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1932] [1933] [1934] Underfull \hbox (badness 10000) in paragraph at lines 1136--1138 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1935] [1936] [1937] Underfull \vbox (badness 10000) has occurred while \output is active [1938] [1939] [1940] [1941] [1942] Underfull \hbox (badness 1371) in paragraph at lines 1664--1666 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1943] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 1734. [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] Underfull \hbox (badness 2057) in paragraph at lines 2384--2386 []\T1/ptm/m/n/10 None for []\T1/zi4/m/it/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1953] Underfull \hbox (badness 2150) in paragraph at lines 2459--2466 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/it/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2459--2466 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [1954] [1955] [1956] [1957] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2736 ... the Clipboard in MS Windows}{clipboard} [1958] [1959] [1960] [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] [1970] [1971] [1972] [1973] [1974] [1975] [1976] Underfull \hbox (badness 6842) in paragraph at lines 4046--4051 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/it/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1977] Underfull \hbox (badness 1430) in paragraph at lines 4109--4113 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/it/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1978] Underfull \hbox (badness 1184) in paragraph at lines 4180--4196 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/it/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4180--4196 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/it/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4180--4196 \T1/ptm/m/n/10 able []\T1/zi4/m/it/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [1979] [1980] Underfull \hbox (badness 10000) in paragraph at lines 4330--4332 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/it/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1981] [1982] [1983] [1984] [1985] [1986] [1987] [1988] [1989] [1990] [1991] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5101 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5101 ...mat Unordered and Ordered Lists}{format} [1992] [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \hbox (badness 1622) in paragraph at lines 5624--5628 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2000] [2001] [2002] [2003] [2004] Underfull \hbox (badness 1448) in paragraph at lines 6003--6008 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 6550. Underfull \hbox (badness 1371) in paragraph at lines 6554--6556 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [2013] [2014] Underfull \hbox (badness 1502) in paragraph at lines 6643--6648 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6643--6648 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2015] [2016] Underfull \hbox (badness 10000) in paragraph at lines 6816--6825 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, [2017] Underfull \hbox (badness 2150) in paragraph at lines 6880--6883 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2018] [2019] Underfull \hbox (badness 3118) in paragraph at lines 7019--7021 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2020] [2021] Underfull \hbox (badness 1325) in paragraph at lines 7198--7202 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/it/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2022] Underfull \hbox (badness 1424) in paragraph at lines 7290--7293 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2023] Underfull \hbox (badness 3219) in paragraph at lines 7361--7368 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/i t/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7361--7368 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7361--7368 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7361--7368 [][][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/it/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7369--7372 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/it/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2024] [2025] Underfull \hbox (badness 1024) in paragraph at lines 7499--7502 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/it/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7532--7537 [][][]\T1/zi4/m/it/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2026] Underfull \hbox (badness 5133) in paragraph at lines 7591--7595 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] [2036] Underfull \hbox (badness 10000) in paragraph at lines 8252--8254 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/it/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2037] [2038] [2039] [2040] [2041] [2042] [2043] [2044] [2045] [2046] [2047] [2048] Underfull \hbox (badness 2310) in paragraph at lines 9016--9021 []\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2049] [2050] [2051] [2052] [2053] [2054] [2055] [2056] Underfull \hbox (badness 1248) in paragraph at lines 9582--9586 []\T1/zi4/m/it/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2057] Underfull \hbox (badness 1789) in paragraph at lines 9662--9664 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2058] [2059] [2060] [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] Underfull \hbox (badness 1097) in paragraph at lines 10514--10517 []\T1/ptm/m/n/10 The name []\T1/zi4/m/it/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2070] [2071] Underfull \hbox (badness 3000) in paragraph at lines 10650--10655 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 read.table[][][][]\T1/ptm/m/n/10 ; [2072] [2073] [2074] [2075] [2076] [2077] [2078] [2079] Underfull \hbox (badness 2134) in paragraph at lines 11244--11249 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 write.table[][][][]\T1/ptm/m/n/10 ; [2080] Underfull \hbox (badness 10000) in paragraph at lines 11300--11305 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11300--11305 []\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/it/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 2469) in paragraph at lines 11798--11802 []\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia , The Free En-cy-clo-pe-dia. Underfull \hbox (badness 3428) in paragraph at lines 11798--11802 [][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac- [2089] [2090] [2091] [2092] [2093] Underfull \hbox (badness 4060) in paragraph at lines 12225--12228 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/it/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/it/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able [2094] Overfull \hbox (18.77168pt too wide) in paragraph at lines 12248--12248 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2095] [2096] [2097] [2098] Underfull \hbox (badness 2150) in paragraph at lines 12503--12505 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac s / manual / [2099] [2100] [2101] Underfull \hbox (badness 10000) in paragraph at lines 12723--12727 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/it/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12756--12762 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12771--12777 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2102] [2103] [2104] Underfull \hbox (badness 1009) in paragraph at lines 12946--12958 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If Underfull \hbox (badness 4779) in paragraph at lines 12986--12988 []\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/it/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and [2105] Underfull \hbox (badness 1077) in paragraph at lines 13016--13023 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2106] [2107] [2108] [2109] [2110] [2111] Underfull \hbox (badness 3780) in paragraph at lines 13438--13444 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/it/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13456--13459 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/it/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2112] [2113] [2114] Underfull \hbox (badness 2302) in paragraph at lines 13661--13663 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2115] [2116] [2117] [2118] [2119] Underfull \hbox (badness 10000) in paragraph at lines 13960--13965 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/it/10 deparse[][][](control = ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 13969--13972 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2120] [2121] [2122] [2123] [2124] [2125] Underfull \hbox (badness 2932) in paragraph at lines 14402--14409 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14402--14409 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/it/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. Ob- [2126] [2127] Underfull \hbox (badness 1460) in paragraph at lines 14566--14574 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/it/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/it/10 tar []\T1/ptm/m/n /10 which used [2128] [2129] Underfull \hbox (badness 6510) in paragraph at lines 14716--14720 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14723--14726 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14723--14726 \T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2130] [2131] [2132] [2133] [2134] [2135] [2136] [2137] [2138] [2139] Underfull \hbox (badness 10000) in paragraph at lines 15403--15408 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/it/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/it/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15403--15408 [][][]\T1/zi4/m/it/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/i t/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15409--15411 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See Underfull \hbox (badness 10000) in paragraph at lines 15468--15471 [][][]\T1/zi4/m/it/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151] [2152] [2153] [2154] [2155]) [2156] [2157] [2158] (./KernSmooth-pkg.tex Chapter 15. [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168]) (./MASS-pkg.tex Chapter 16. [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] [2177] [2178] [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] [2208] Underfull \hbox (badness 10000) in paragraph at lines 2877--2882 []\T1/zi4/m/it/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "negative [2209] [2210] Underfull \hbox (badness 4686) in paragraph at lines 3049--3051 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] [2226] [2227] [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] Underfull \hbox (badness 1117) in paragraph at lines 4829--4832 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2236] Underfull \hbox (badness 1117) in paragraph at lines 4908--4911 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2237] [2238] [2239] [2240] [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6175 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk.1}) h as been already used, duplicate ignored \relax l.6175 ...sical N, P, K Factorial Experiment}{npk} [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] Underfull \hbox (badness 1117) in paragraph at lines 7146--7153 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2267] Underfull \hbox (badness 3138) in paragraph at lines 7217--7223 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2268] [2269] [2270] Underfull \hbox (badness 1910) in paragraph at lines 7396--7399 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/it/10 min(p, [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] Underfull \hbox (badness 4686) in paragraph at lines 8029--8031 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] [2297] [2298] [2299] [2300] [2301] [2302] [2303] [2304] [2305] [2306] [2307] [2308] [2309] [2310] [2311] [2312] [2313] [2314] [2315] [2316]) (./Matrix-pkg.tex Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 35--38 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 35--38 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2317] Underfull \hbox (badness 1769) in paragraph at lines 89--92 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2318] [2319] [2320] [2321] [2322] Underfull \hbox (badness 5119) in paragraph at lines 488--492 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2323] Underfull \hbox (badness 2035) in paragraph at lines 584--587 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/it/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/it/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/it/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2324] [2325] [2326] [2327] Underfull \hbox (badness 1521) in paragraph at lines 859--864 []\T1/ptm/m/n/10 option [][][]\T1/zi4/m/it/10 logical[][][] []\T1/ptm/m/n/10 in -di-cat-ing if the re-sult should be sparse, i.e., for-mally Underfull \hbox (badness 2790) in paragraph at lines 859--864 \T1/ptm/m/n/10 in-her-it-ing from []\T1/zi4/m/it/10 "[][]sparseMatrix[][][]"[]\ T1/ptm/m/n/10 . The de-fault, [][][]\T1/zi4/m/it/10 NA[][][][]\T1/ptm/m/n/10 , de-cides from the Underfull \hbox (badness 1189) in paragraph at lines 859--864 \T1/ptm/m/n/10 ``spar-sity'' of []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 and []\T1/ zi4/m/it/10 y[]\T1/ptm/m/n/10 , see e.g., the \T1/phv/m/n/10 R \T1/ptm/m/n/10 c ode in []\T1/zi4/m/it/10 selectMethod(cbind2, [2328] [2329] Underfull \hbox (badness 10000) in paragraph at lines 1029--1031 []\T1/zi4/m/it/10 signature(from = "CHMfactor", to = "sparseMatrix") []\T1/ptm/ m/n/10 (or equiv-a-lently, []\T1/zi4/m/it/10 to = [2330] [2331] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol}) ha s been already used, duplicate ignored \relax l.1141 ...- 'Matrix' S4 Generic and Methods}{chol} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol.1}) has been already used, duplicate ignored \relax l.1141 ...- 'Matrix' S4 Generic and Methods}{chol} [2332] [2333] [2334] Underfull \hbox (badness 2277) in paragraph at lines 1411--1414 []\T1/ptm/m/n/10 This is a generic func-tion with spe-cial meth-ods for dif-fer -ent types of ma-tri-ces. Use [2335] [2336] [2337] Underfull \hbox (badness 1097) in paragraph at lines 1581--1584 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "MatrixFactorization" []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 "dtrMatrix"[]\T1/ptm/m/n/10 , di-rectly. Class []\T1/zi4 /m/it/10 "dgeMatrix"[]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 1783) in paragraph at lines 1587--1591 []\T1/ptm/m/n/10 Both these fac-tor-iza-tions can \T1/ptm/m/it/10 di-rectly \T1 /ptm/m/n/10 be treated as (tri-an-gu-lar) ma-tri-ces, as they ex-tend pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums}) has been already used, duplicate ignored \relax l.1644 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums.1 }) has been already used, duplicate ignored \relax l.1644 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colMeans} ) has been already used, duplicate ignored \relax l.1645 \aliasA{colMeans}{colSums}{colMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowMeans} ) has been already used, duplicate ignored \relax l.1658 \aliasA{rowMeans}{colSums}{rowMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowSums}) has been already used, duplicate ignored \relax l.1665 \aliasA{rowSums}{colSums}{rowSums} [2338] [2339] [2340] [2341] Underfull \hbox (badness 3547) in paragraph at lines 1880--1883 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2342] [2343] [2344] [2345] Underfull \hbox (badness 1983) in paragraph at lines 2287--2295 []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unpackedMatrix[][][][]\T1/ptm/m/n/10 . Al-ter-na-tively into the (cur-rently) three sub-classes [][][]\T1/zi4/m/it/ 10 ddenseMatrix[][][][]\T1/ptm/m/n/10 , [2346] [2347] [2348] [2349] Underfull \hbox (badness 2717) in paragraph at lines 2613--2617 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2350] [2351] Underfull \hbox (badness 3417) in paragraph at lines 2728--2730 []\T1/zi4/m/it/10 .sparseDiagonal() []\T1/ptm/m/n/10 ex-ists pri-mar-ily to lev er-age ef-fi-cient C-level meth-ods avail-able for [2352] Underfull \hbox (badness 8019) in paragraph at lines 2853--2855 []\T1/zi4/m/it/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/it/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 2856--2860 []\T1/zi4/m/it/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2353] [2354] [2355] [2356] Underfull \hbox (badness 1902) in paragraph at lines 3181--3183 [][][]\T1/zi4/m/it/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/it/10 zapsmall(x, [2357] Underfull \hbox (badness 2020) in paragraph at lines 3215--3218 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/it/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2358] [2359] Underfull \hbox (badness 4378) in paragraph at lines 3415--3424 []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 chol[][][]() []\T1/ptm/m/n/10 is typ- i-cally used, e.g., see []\T1/zi4/m/it/10 selectMethod("coerce", c(from="dsyMat rix", [2360] Underfull \hbox (badness 1354) in paragraph at lines 3483--3486 []\T1/ptm/m/n/10 a Ma-trix like []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 but with n o ex-plicit ze-ros, i.e., []\T1/zi4/m/it/10 !any(x@x == 0)[]\T1/ptm/m/n/10 , al -ways in-her-it-ing from [2361] [2362] [2363] [2364] [2365] Underfull \hbox (badness 4518) in paragraph at lines 3835--3838 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = Underfull \hbox (badness 3690) in paragraph at lines 3838--3841 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = [2366] Underfull \hbox (badness 2318) in paragraph at lines 3940--3944 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/it/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/it/10 "dMatrix"[]\T1/ptm/m/n/10 , [2367] [2368] Underfull \hbox (badness 3240) in paragraph at lines 4055--4059 []\T1/zi4/m/it/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/it/10 determinant[][][](x) [2369] [2370] [2371] [2372] [2373] [2374] Overfull \hbox (23.27168pt too wide) in paragraph at lines 4481--4481 []\T1/zi4/m/n/9 str(jgl009 <- ## https://math.nist.gov/MatrixMarket/data/Harwe ll-Boeing/counterx/counterx.html[] Overfull \hbox (8.27782pt too wide) in paragraph at lines 4488--4488 [] \T1/zi4/m/n/9 readHB(gzcon(url("https://www.cise.ufl.edu/research/sparse/RB /Boeing/msc00726.tar.gz"))))[] [2375] [2376] Underfull \hbox (badness 1087) in paragraph at lines 4663--4669 []\T1/ptm/m/n/10 a string whose first three char-ac-ters spec-ify the class of the re-sult. It [2377] Underfull \hbox (badness 3590) in paragraph at lines 4683--4688 []\T1/ptm/m/n/10 a string ([]\T1/zi4/m/it/10 "C"[]\T1/ptm/m/n/10 , []\T1/zi4/m/ it/10 "R"[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 "T"[]\T1/ptm/m/n/10 ) spec-i-f y-ing the stor-age of the re-sult as Underfull \hbox (badness 4660) in paragraph at lines 4701--4703 []\T1/ptm/m/n/10 a string, one of []\T1/zi4/m/it/10 "trace", "sumLog", "prod", "min", "max", "range", Underfull \hbox (badness 1609) in paragraph at lines 4748--4752 []\T1/zi4/m/it/10 .CR2T []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 .T2CR []\T1/ptm/ m/n/10 co-erce be-tween [][][]\T1/zi4/m/it/10 TsparseMatrix[][][] []\T1/ptm/m/n /10 and the union of [][][]\T1/zi4/m/it/10 CsparseMatrix[][][] []\T1/ptm/m/n/10 and [2378] [2379] [2380] Underfull \hbox (badness 1931) in paragraph at lines 4944--4946 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/it/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2381] [2382] [2383] [2384] Underfull \hbox (badness 1005) in paragraph at lines 5247--5252 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/it/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 5247--5252 \T1/ptm/m/n/10 When []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/it/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is [2385] Underfull \hbox (badness 5862) in paragraph at lines 5266--5269 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/it/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2386] Overfull \hbox (42.75635pt too wide) in paragraph at lines 5315--5315 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2387] Underfull \hbox (badness 3229) in paragraph at lines 5420--5429 []\T1/ptm/m/n/10 While ``row-indexing'' (of more than one row \T1/ptm/m/it/10 o r \T1/ptm/m/n/10 us-ing []\T1/zi4/m/it/10 drop=FALSE[]\T1/ptm/m/n/10 ) stays wi thin the Underfull \hbox (badness 10000) in paragraph at lines 5462--5464 []\T1/zi4/m/it/10 signature(x = "matrix", y = "indMatrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 3989) in paragraph at lines 5467--5470 []\T1/zi4/m/it/10 signature(from = "numeric", to = "indMatrix")[]\T1/ptm/m/n/10 : a user con-ve-nience, to al-low [2388] Underfull \hbox (badness 10000) in paragraph at lines 5477--5480 []\T1/zi4/m/it/10 signature(from = "indMatrix", to = "matrix")[]\T1/ptm/m/n/10 : co-er-cion to a tra-di-tional [2389] [2390] [2391] [2392] Overfull \hbox (26.39984pt too wide) in paragraph at lines 5872--5872 []\T1/zi4/m/it/10 isSymmetric(object, tol = 100 * .Machine$double.eps, tol1 = 8 * tol, checkDN = TRUE, ...)[] [2393] [2394] [2395] [2396] Underfull \vbox (badness 10000) has occurred while \output is active [2397] [2398] [2399] [2400] Underfull \hbox (badness 2478) in paragraph at lines 6478--6483 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 6486--6489 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2401] [2402] [2403] Underfull \hbox (badness 10000) in paragraph at lines 6720--6723 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2404] Underfull \hbox (badness 10000) in paragraph at lines 6781--6784 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2405] Underfull \hbox (badness 2050) in paragraph at lines 6880--6883 []\T1/zi4/m/it/10 lu() []\T1/ptm/m/n/10 is a generic func-tion with spe-cial me th-ods for dif-fer-ent types of ma-tri-ces. Use [2406] [2407] [2408] [2409] [2410] [2411] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.7305 \aliasA{det}{Matrix-class}{det} Underfull \hbox (badness 1527) in paragraph at lines 7396--7398 []\T1/zi4/m/it/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/it/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode Underfull \hbox (badness 4846) in paragraph at lines 7401--7404 []\T1/zi4/m/it/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 7406--7409 [2412] pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rpcent.* .Rpcent.}) has been already used, duplicate ignored \relax l.7478 ...*\%}{matrix-products}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.crossprod }) has been already used, duplicate ignored \relax l.7575 ...A{crossprod}{matrix-products}{crossprod} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.tcrosspro d}) has been already used, duplicate ignored \relax l.7676 ...tcrossprod}{matrix-products}{tcrossprod} [2413] [2414] Underfull \hbox (badness 10000) in paragraph at lines 7853--7858 []\T1/zi4/m/it/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 7853--7858 []\T1/zi4/m/it/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 7862--7864 []\T1/zi4/m/it/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 7864--7866 []\T1/zi4/m/it/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2415] [2416] Underfull \hbox (badness 1430) in paragraph at lines 8015--8020 []\T1/ptm/m/n/10 classes in-her-it-ing from []\T1/zi4/m/it/10 "MatrixFactorizat ion"[]\T1/ptm/m/n/10 , such as [][][]\T1/zi4/m/it/10 LU[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Cholesky[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 C HMfactor[][][][]\T1/ptm/m/n/10 , and [2417] [2418] Underfull \hbox (badness 10000) in paragraph at lines 8131--8133 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/it/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/it/10 X <- [2419] [2420] Underfull \vbox (badness 10000) has occurred while \output is active [2421] Underfull \hbox (badness 2478) in paragraph at lines 8329--8334 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 8337--8340 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2422] [2423] Underfull \hbox (badness 5924) in paragraph at lines 8517--8519 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2424] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.norm}) ha s been already used, duplicate ignored \relax l.8557 \HeaderA{norm}{Matrix Norms}{norm} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.norm.1}) has been already used, duplicate ignored \relax l.8557 \HeaderA{norm}{Matrix Norms}{norm} [2425] [2426] [2427] Underfull \hbox (badness 10000) in paragraph at lines 8859--8862 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2428] Underfull \hbox (badness 10000) in paragraph at lines 8923--8926 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2429] [2430] Underfull \hbox (badness 4242) in paragraph at lines 9058--9061 [][][]\T1/zi4/m/it/10 pack[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unp ack[][][][]\T1/ptm/m/n/10 ; its vir-tual "com-ple-ment" []\T1/zi4/m/it/10 "[][] unpackedMatrix[][][]"[]\T1/ptm/m/n/10 ; its proper sub-classes [2431] [2432] Underfull \hbox (badness 10000) in paragraph at lines 9137--9139 []\T1/zi4/m/it/10 signature(x = "matrix", y = "pMatrix") []\T1/ptm/m/n/10 and o ther sig-na-tures (use [2433] [2434] [2435] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.9364 \aliasA{qr}{qr-methods}{qr} [2436] [2437] Underfull \hbox (badness 7186) in paragraph at lines 9531--9537 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/it/10 qr[][][](x, tol, [2438] [2439] [2440] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rcond}) h as been already used, duplicate ignored \relax l.9688 ... the Reciprocal Condition Number}{rcond} [2441] [2442] [2443] [2444] Underfull \hbox (badness 2351) in paragraph at lines 9997--10005 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 9997--10005 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/it/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/it/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/it/10 NULL[]\T1/ptm/m/n/10 --- [2445] [2446] [2447] [2448] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solve}) h as been already used, duplicate ignored \relax l.10265 \aliasA{solve}{solve-methods}{solve} [2449] [2450] Underfull \hbox (badness 4403) in paragraph at lines 10501--10504 []\T1/ptm/m/n/10 , and sim-i-lar []\T1/zi4/m/it/10 b[]\T1/ptm/m/n/10 , in-clud- ing []\T1/zi4/m/it/10 "missing"[]\T1/ptm/m/n/10 , and [2451] Underfull \hbox (badness 10000) in paragraph at lines 10572--10575 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame Underfull \hbox (badness 10000) in paragraph at lines 10608--10611 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 10619--10623 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2452] [2453] [2454] [2455] [2456] [2457] [2458] Underfull \vbox (badness 10000) has occurred while \output is active [2459] Underfull \hbox (badness 10000) in paragraph at lines 11191--11199 []\T1/zi4/m/it/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 11191--11199 []\T1/zi4/m/it/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/it/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/it/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 11216--11224 []\T1/zi4/m/it/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 11216--11224 []\T1/zi4/m/it/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2460] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr.Q}) ha s been already used, duplicate ignored \relax l.11282 \aliasA{qr.Q}{sparseQR-class}{qr.Q} [2461] [2462] Underfull \hbox (badness 5036) in paragraph at lines 11467--11469 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2463] [2464] Underfull \hbox (badness 2828) in paragraph at lines 11629--11632 []\T1/zi4/m/it/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 11651--11654 []\T1/zi4/m/it/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/it/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/it/10 (x, times, [2465] Underfull \vbox (badness 10000) has occurred while \output is active [2466] [2467] [2468] [2469] Underfull \hbox (badness 2057) in paragraph at lines 11999--12001 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., [2470] [2471] Underfull \hbox (badness 10000) in paragraph at lines 12174--12179 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 12180--12186 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/it/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 crossprod []\T1/ptm/m /n/10 are de-fined [2472] Underfull \hbox (badness 1902) in paragraph at lines 12215--12219 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 sparseMat rix[][][] []\T1/ptm/m/n/10 con-struc-tors for []\T1/zi4/m/it/10 "dgTMatrix" []\ T1/ptm/m/n/10 (and other [2473] [2474] [2475] [2476] [2477] [2478] [2479] [2480] Underfull \hbox (badness 6910) in paragraph at lines 12940--12942 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2481] Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12987. Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12987. [2482] [2483] [2484]) (./boot-pkg.tex Chapter 18. [2485] [2486] [2487] [2488] [2489] [2490] [2491] [2492] [2493] [2494] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2495] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2496] Underfull \vbox (badness 10000) has occurred while \output is active [2497] [2498] [2499] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2500] [2501] [2502] [2503] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2504] [2505] [2506] [2507] [2508] [2509] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/it/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2510] [2511] Underfull \vbox (badness 10000) has occurred while \output is active [2512] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2513] [2514] [2515] [2516] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2517] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2518] [2519] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /it/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/it/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/it/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/it/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/it/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2520] [2521] [2522] [2523] [2524] [2525] [2526] [2527] [2528] [2529] [2530] [2531] [2532] [2533] [2534] [2535] [2536] [2537] [2538] [2539] [2540] [2541] [2542] [2543] [2544] [2545] [2546] [2547] [2548] [2549] [2550] [2551] [2552] [2553] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2554] [2555] [2556] [2557] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2558] [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/it/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2569] [2570] [2571] [2572] [2573] [2574] [2575] [2576] [2577] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2578] [2579] [2580] [2581] [2582] [2583] [2584] [2585] [2586] [2587]) (./class-pkg.tex [2588] Chapter 19. [2589] [2590] [2591] [2592] [2593] [2594] [2595] [2596] [2597] [2598] [2599] [2600] [2601] [2602] [2603] [2604]) (./cluster-pkg.tex Chapter 20. [2605] [2606] [2607] [2608] [2609] [2610] [2611] [2612] [2613] [2614] Underfull \hbox (badness 4144) in paragraph at lines 691--694 []\T1/ptm/m/n/10 Setting this to []\T1/zi4/m/it/10 FALSE []\T1/ptm/m/n/10 saves mem-ory (and hence time), but dis-ables [2615] [2616] Underfull \hbox (badness 1412) in paragraph at lines 783--788 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/it/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/it/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2617] Underfull \hbox (badness 10000) in paragraph at lines 881--883 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2618] [2619] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2620] [2621] [2622] [2623] [2624] [2625] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 [2626] [2627] Underfull \hbox (badness 2503) in paragraph at lines 1589--1592 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/it/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2628] Underfull \hbox (badness 4954) in paragraph at lines 1686--1688 []\T1/ptm/b/n/10 A\T1/ptm/m/n/10 symmetric bi-nary vari-able, aka []\T1/zi4/m/i t/10 "A" []\T1/ptm/m/n/10 in re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2629] Underfull \hbox (badness 7667) in paragraph at lines 1699--1703 []\T1/ptm/b/n/10 I\T1/ptm/m/n/10 nterval scaled -- the \T1/ptm/b/n/10 de-fault \T1/ptm/m/n/10 for all nu-meric Underfull \hbox (badness 10000) in paragraph at lines 1699--1703 \T1/ptm/m/n/10 (incl []\T1/zi4/m/it/10 integer[]\T1/ptm/m/n/10 ) columns of []\ T1/zi4/m/it/10 x[]\T1/ptm/m/n/10 , aka []\T1/zi4/m/it/10 "I" []\T1/ptm/m/n/10 i n re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2630] [2631] [2632] [2633] [2634] [2635] Underfull \hbox (badness 10000) in paragraph at lines 2207--2210 [2636] Underfull \hbox (badness 10000) in paragraph at lines 2221--2227 [][][]\T1/zi4/m/it/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/it/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/i t/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2637] [2638] [2639] Underfull \hbox (badness 6675) in paragraph at lines 2456--2458 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2640] [2641] [2642] [2643] [2644] [2645] [2646] [2647] Underfull \hbox (badness 2980) in paragraph at lines 3051--3055 [][][]\T1/zi4/m/it/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [2648] [2649] [2650] [2651] [2652] [2653] Underfull \hbox (badness 1142) in paragraph at lines 3392--3395 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2654] [2655] Underfull \hbox (badness 1142) in paragraph at lines 3511--3514 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2656] [2657] [2658] Underfull \hbox (badness 2582) in paragraph at lines 3734--3739 [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 clara[][][][]\T1/ptm/m/n/10 , [2659] Underfull \hbox (badness 2698) in paragraph at lines 3796--3801 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/it/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3796--3801 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/it/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/it/10 x x <- [2660] [2661] [2662] [2663] [2664] Underfull \hbox (badness 10000) in paragraph at lines 4088--4090 []\T1/ptm/m/n/10 a []\T1/zi4/m/it/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/it/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2665] [2666] [2667] [2668] Underfull \hbox (badness 2626) in paragraph at lines 4317--4322 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/it/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/it/10 col = [2669] Underfull \hbox (badness 1383) in paragraph at lines 4395--4400 []\T1/ptm/m/n/10 While []\T1/zi4/m/it/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/it/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2670] [2671] [2672] [2673] [2674] [2675] [2676] Underfull \hbox (badness 10000) in paragraph at lines 4839--4841 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/it/10 xclara.dat\T1/ptm/m/n/10 ' in side [2677] [2678]) (./codetools-pkg.tex Chapter 21. [2679] [2680] [2681] [2682] [2683]) (./foreign-pkg.tex [2684] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2685] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2686] [2687] [2688] [2689] [2690] [2691] [2692] Underfull \hbox (badness 2846) in paragraph at lines 505--514 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 505--514 \T1/ptm/m/n/10 els. For []\T1/zi4/m/it/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 505--514 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/it/10 paste0(label, [2693] Overfull \hbox (6.73795pt too wide) in paragraph at lines 623--623 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2694] [2695] [2696] Underfull \hbox (badness 10000) in paragraph at lines 811--812 [2697] Underfull \hbox (badness 10000) in paragraph at lines 868--872 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 868--872 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 868--872 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 868--872 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2698] [2699] Underfull \hbox (badness 10000) in paragraph at lines 989--991 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2700] [2701] [2702] [2703] Underfull \hbox (badness 10000) in paragraph at lines 1268--1274 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/it/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2704] [2705]) (./lattice-pkg.tex [2706] Chapter 23. [2707] Underfull \hbox (badness 1484) in paragraph at lines 117--121 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 117--121 \T1/zi4/m/it/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2708] [2709] [2710] [2711] [2712] [2713] [2714] [2715] [2716] [2717] [2718] [2719] [2720] [2721] [2722] Underfull \hbox (badness 1062) in paragraph at lines 1402--1406 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2723] [2724] [2725] Underfull \hbox (badness 1803) in paragraph at lines 1570--1587 [][][]\T1/zi4/m/it/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/it/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1570--1587 [][][]\T1/zi4/m/it/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/it/10 strip.default[][][][]\T1/ptm/m/n/10 , [2726] [2727] Underfull \hbox (badness 3009) in paragraph at lines 1712--1714 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/it/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1742--1746 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2728] [2729] [2730] [2731] [2732] Underfull \hbox (badness 10000) in paragraph at lines 2128--2131 []\T1/ptm/m/n/10 When []\T1/zi4/m/it/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2733] [2734] [2735] [2736] [2737] [2738] [2739] [2740] [2741] [2742] Underfull \hbox (badness 2781) in paragraph at lines 2836--2838 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/it/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2743] [2744] Underfull \hbox (badness 2486) in paragraph at lines 2988--2992 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2745] [2746] [2747] [2748] [2749] [2750] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.parallel} ) has been already used, duplicate ignored \relax l.3462 \aliasA{parallel}{B\_08\_splom}{parallel} [2751] [2752] [2753] [2754] [2755] [2756] [2757] Underfull \hbox (badness 5696) in paragraph at lines 3949--3953 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3949--3953 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/it/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3949--3953 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2758] [2759] [2760] [2761] Underfull \hbox (badness 1173) in paragraph at lines 4208--4212 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in Underfull \hbox (badness 3219) in paragraph at lines 4235--4237 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2762] [2763] [2764] Underfull \hbox (badness 3492) in paragraph at lines 4435--4445 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/it/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/it/10 "plot.symbol"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4460--4463 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4463--4465 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 and [2765] [2766] [2767] [2768] [2769] [2770] [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] [2773] [2774] Underfull \hbox (badness 6157) in paragraph at lines 5201--5204 []\T1/zi4/m/it/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/it/10 print.shingle []\T1/ptm/m/n/10 and [2775] [2776] [2777] [2778] [2779] [2780] [2781] Underfull \hbox (badness 10000) in paragraph at lines 5659--5662 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5659--5662 []\T1/zi4/m/it/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2782] [2783] [2784] [2785] Underfull \hbox (badness 4805) in paragraph at lines 6021--6025 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 6032--6039 []\T1/ptm/m/n/10 For []\T1/zi4/m/it/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 6032--6039 []\T1/zi4/m/it/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/it/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 6032--6039 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/it/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 6032--6039 []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 6032--6039 [][][]\T1/zi4/m/it/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2786] [2787] [2788] Underfull \vbox (badness 10000) has occurred while \output is active [2789] Underfull \hbox (badness 4242) in paragraph at lines 6332--6337 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6332--6337 \T1/ptm/m/n/10 ter []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2790] [2791] Underfull \hbox (badness 2310) in paragraph at lines 6448--6453 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/it/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/it/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2792] [2793] [2794] [2795] [2796] [2797] [2798] [2799] [2800] [2801] [2802] [2803] Underfull \hbox (badness 3168) in paragraph at lines 7309--7313 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2804] [2805] [2806] [2807] Underfull \hbox (badness 2012) in paragraph at lines 7580--7583 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2808] [2809] [2810] Underfull \hbox (badness 3333) in paragraph at lines 7787--7789 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/it/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 plot.line []\T1/ptm/m/n/10 us-ing Underfull \hbox (badness 2318) in paragraph at lines 7815--7823 []\T1/zi4/m/it/10 "spline" []\T1/ptm/m/n/10 adds a cu-bic smooth-ing spline fit (same as [][][]\T1/zi4/m/it/10 panel.spline[][][][]\T1/ptm/m/n/10 ). [2811] [2812] [2813] Underfull \vbox (badness 10000) has occurred while \output is active [2814] [2815] [2816] Underfull \hbox (badness 1436) in paragraph at lines 8225--8231 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2817] [2818] [2819] [2820] [2821] [2822] [2823] [2824] Underfull \hbox (badness 10000) in paragraph at lines 8794--8797 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/it/10 panel.supe rpose []\T1/ptm/m/n/10 from [2825] Underfull \hbox (badness 1092) in paragraph at lines 8840--8842 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/it/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/it/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2826] [2827] Underfull \hbox (badness 3895) in paragraph at lines 9001--9004 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/it/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in [2828] Underfull \hbox (badness 1515) in paragraph at lines 9077--9081 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2829] [2830] Underfull \hbox (badness 6316) in paragraph at lines 9183--9188 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in Underfull \hbox (badness 5908) in paragraph at lines 9200--9203 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/it/10 xscale .components.default []\T1/ptm/m/n/10 and [2831] [2832] [2833] [2834] Underfull \hbox (badness 2418) in paragraph at lines 9491--9495 []\T1/ptm/m/n/10 returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/it/10 left, right, left.name, right.name, [2835] [2836] [2837] [2838] [2839] [2840] [2841] Underfull \hbox (badness 2310) in paragraph at lines 9955--9959 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/it/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/it/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 9960--9963 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/it/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/it/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Morris"[]\T1/ptm/m/n/10 , [2842] [2843] [2844] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma} ) has been already used, duplicate ignored \relax l.10186 \aliasA{melanoma}{H\_melanoma}{melanoma} [2845] [2846] [2847] Underfull \hbox (badness 4144) in paragraph at lines 10410--10413 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10410--10413 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/it /10 https : / / ruralhealth . und . edu / projects / [2848] [2849]) (./mgcv-pkg.tex [2850] Chapter 24. [2851] [2852] [2853] Underfull \hbox (badness 1142) in paragraph at lines 184--188 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 209--214 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2854] [2855] [2856] [2857] Underfull \hbox (badness 10000) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/it/10 gam.side[][][][]\T1/ptm/m/n/10 , [2858] [2859] [2860] [2861] [2862] [2863] Underfull \hbox (badness 1406) in paragraph at lines 704--705 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2864] [2865] Underfull \hbox (badness 1158) in paragraph at lines 814--816 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion [2866] Underfull \hbox (badness 1259) in paragraph at lines 877--878 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2867] Underfull \vbox (badness 10000) has occurred while \output is active [2868] [2869] [2870] [2871] [2872] [2873] Underfull \hbox (badness 1281) in paragraph at lines 1272--1273 []\T1/zi4/m/it/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/it/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/it/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2874] [2875] Underfull \vbox (badness 10000) has occurred while \output is active [2876] Underfull \vbox (badness 10000) has occurred while \output is active [2877] [2878] Underfull \vbox (badness 10000) has occurred while \output is active [2879] [2880] [2881] [2882] [2883] [2884] [2885] [2886] [2887] [2888] [2889] [2890] [2891] [2892] [2893] [2894] [2895] [2896] Underfull \hbox (badness 1142) in paragraph at lines 2594--2598 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2897] Underfull \hbox (badness 1043) in paragraph at lines 2620--2626 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2898] [2899] [2900] [2901] [2902] [2903] Underfull \vbox (badness 10000) has occurred while \output is active [2904] Underfull \vbox (badness 10000) has occurred while \output is active [2905] [2906] [2907] [2908] [2909] [2910] [2911] [2912] [2913] [2914] [2915] [2916] [2917] [2918] [2919] [2920] [2921] Underfull \hbox (badness 10000) in paragraph at lines 4065--4069 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/it/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/it/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2922] [2923] Underfull \vbox (badness 10000) has occurred while \output is active [2924] [2925] [2926] Underfull \hbox (badness 1184) in paragraph at lines 4352--4356 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2927] [2928] [2929] [2930] [2931] [2932] [2933] [2934] [2935] [2936] [2937] [2938] Underfull \hbox (badness 1142) in paragraph at lines 5075--5079 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2939] Underfull \hbox (badness 1231) in paragraph at lines 5179--5181 []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 wit h [2940] [2941] [2942] Underfull \vbox (badness 10000) has occurred while \output is active [2943] [2944] [2945] [2946] Underfull \hbox (badness 2181) in paragraph at lines 5621--5622 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2947] [2948] [2949] [2950] [2951] [2952] [2953] Underfull \hbox (badness 10000) in paragraph at lines 6009--6010 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/it/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2954] [2955] [2956] [2957] [2958] [2959] [2960] [2961] [2962] [2963] [2964] Underfull \hbox (badness 1142) in paragraph at lines 6594--6598 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2965] [2966] [2967] Underfull \vbox (badness 10000) has occurred while \output is active [2968] [2969] [2970] [2971] Underfull \hbox (badness 1087) in paragraph at lines 6966--6967 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/it/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [2972] [2973] Underfull \vbox (badness 10000) has occurred while \output is active [2974] Underfull \vbox (badness 10000) has occurred while \output is active [2975] [2976] [2977] [2978] [2979] [2980] [2981] [2982] [2983] [2984] [2985] [2986] [2987] Underfull \hbox (badness 1242) in paragraph at lines 7915--7916 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [2988] [2989] [2990] [2991] [2992] [2993] [2994] [2995] [2996] [2997] [2998] Underfull \hbox (badness 6001) in paragraph at lines 8560--8562 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/it/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [2999] [3000] [3001] [3002] [3003] [3004] [3005] [3006] [3007] [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] [3010] Underfull \hbox (badness 1038) in paragraph at lines 9309--9312 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/it/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/it/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9309--9312 []\T1/zi4/m/it/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [3011] Underfull \hbox (badness 10000) in paragraph at lines 9365--9368 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/it/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/it/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [3012] [3013] [3014] [3015] [3016] [3017] [3018] [3019] [3020] [3021] [3022] Underfull \hbox (badness 1852) in paragraph at lines 10039--10042 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [3023] [3024] [3025] Underfull \hbox (badness 1852) in paragraph at lines 10208--10211 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [3026] [3027] Underfull \vbox (badness 10000) has occurred while \output is active [3028] [3029] Underfull \hbox (badness 1205) in paragraph at lines 10448--10449 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10448--10449 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10454--10459 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3030] Underfull \hbox (badness 1205) in paragraph at lines 10538--10539 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10538--10539 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [3031] [3032] [3033] Underfull \hbox (badness 1253) in paragraph at lines 10737--10739 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [3034] [3035] [3036] [3037] [3038] [3039] Underfull \hbox (badness 4792) in paragraph at lines 10998--11001 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/i t/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/it/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 10998--11001 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [3040] Underfull \hbox (badness 10000) in paragraph at lines 11105--11108 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/it /10 "deviance"[]\T1/ptm/m/n/10 , [3041] [3042] [3043] [3044] [3045] [3046] [3047] [3048] [3049] [3050] [3051] [3052] [3053] [3054] Underfull \hbox (badness 3861) in paragraph at lines 11896--11899 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3055] [3056] Underfull \hbox (badness 1320) in paragraph at lines 12011--12016 \T1/ptm/m/n/10 and []\T1/zi4/m/it/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/it/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3057] Underfull \hbox (badness 1975) in paragraph at lines 12117--12122 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3058] [3059] Underfull \hbox (badness 1762) in paragraph at lines 12206--12218 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/it/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/it/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3060] [3061] [3062] Underfull \hbox (badness 7667) in paragraph at lines 12418--12424 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3063] Underfull \hbox (badness 10000) in paragraph at lines 12459--12460 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3064] [3065] [3066] [3067] Underfull \vbox (badness 10000) has occurred while \output is active [3068] Underfull \hbox (badness 10000) in paragraph at lines 12736--12738 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3069] [3070] Underfull \hbox (badness 10000) in paragraph at lines 12866--12867 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3071] [3072] [3073] Underfull \hbox (badness 1436) in paragraph at lines 13002--13009 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 only al-lows one [3074] [3075] Underfull \hbox (badness 10000) in paragraph at lines 13101--13102 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3076] [3077] [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] Underfull \hbox (badness 10000) in paragraph at lines 13702--13708 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13702--13708 []\T1/zi4/m/it/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 for-mula. Note [3086] [3087] [3088] Underfull \vbox (badness 10000) has occurred while \output is active [3089] Underfull \vbox (badness 10000) has occurred while \output is active [3090] [3091] Underfull \hbox (badness 10000) in paragraph at lines 14045--14046 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3092] [3093] [3094] [3095] Overfull \hbox (35.26862pt too wide) in paragraph at lines 14257--14257 []\T1/zi4/m/n/9 b <- gam(y ~ s(x)+s(f1,x,bs="sz")+s(f2,x,bs="sz")+s(f1,f2,x,bs ="sz",id=1),data=dat,method="REML")[] [3096] [3097] Underfull \hbox (badness 3895) in paragraph at lines 14403--14406 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3098] Underfull \hbox (badness 10000) in paragraph at lines 14448--14450 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3099] [3100] [3101] [3102] [3103] Underfull \hbox (badness 1371) in paragraph at lines 14728--14734 []\T1/zi4/m/it/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14739--14741 []\T1/zi4/m/it/10 bs="fs" []\T1/ptm/m/n/10 A spe-cial smoother class (see Underfull \hbox (badness 1132) in paragraph at lines 14739--14741 [][][]\T1/zi4/m/it/10 smooth.construct.fs.smooth.spec[][][][]\T1/ptm/m/n/10 ) i s avail-able for the case in which a smooth is [3104] Underfull \hbox (badness 10000) in paragraph at lines 14769--14773 [][][]\T1/zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 t2[][][] [][]tprs[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 Duchon.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 cubic.regression.spline[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 p.spl ine[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14769--14773 [][][]\T1/zi4/m/it/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Overfull \hbox (46.8009pt too wide) in paragraph at lines 14769--14773 [][][]\T1/zi4/m/it/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 ,[][ ][]\T1/zi4/m/it/10 factor.smooth.interaction[][][] [3105] [3106] [3107] [3108] Underfull \hbox (badness 2326) in paragraph at lines 14974--14981 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/it/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3109] Underfull \hbox (badness 2158) in paragraph at lines 15059--15059 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3110] [3111] [3112] [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] [3123] [3124] [3125] [3126] [3127] [3128] [3129] [3130] [3131] [3132] [3133] [3134] Overfull \hbox (21.42029pt too wide) in paragraph at lines 16621--16621 []\T1/zi4/m/it/10 vcov(object, sandwich=FALSE, freq = FALSE, dispersion = NULL ,unconditional=FALSE, ...)[] [3135] [3136] Underfull \hbox (badness 1796) in paragraph at lines 16734--16737 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/it/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/it/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3137] [3138] [3139] [3140] Underfull \vbox (badness 10000) has occurred while \output is active [3141] [3142] [3143] [3144] [3145] [3146]) (./nlme-pkg.tex Chapter 25. [3147] [3148] [3149] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] [3158] [3159] [3160] [3161] [3162] [3163] [3164] [3165] [3166] [3167] [3168] [3169] [3170] [3171] [3172] [3173] [3174] [3175] [3176] [3177] [3178] [3179] [3180] Underfull \hbox (badness 10000) in paragraph at lines 2254--2260 [][][]\T1/zi4/m/it/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3181] [3182] [3183] [3184] [3185] [3186] [3187] [3188] [3189] [3190] [3191] [3192] [3193] [3194] [3195 pdfTeX warning (ext4): destination with the same identifier (name{Rfn.corMatrix .corCompSymm}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.3189 ] [3196] [3197] [3198] [3199] [3200] [3201] [3202] [3203] [3204] [3205] [3206] [3207] [3208] [3209] [3210] [3211] [3212] [3213] Underfull \hbox (badness 1067) in paragraph at lines 4414--4419 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3214] [3215] [3216] [3217] [3218] [3219] [3220] [3221] [3222] [3223] [3224] [3225] Underfull \hbox (badness 10000) in paragraph at lines 5160--5164 [][][]\T1/zi4/m/it/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/it/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3226] [3227] [3228] [3229] [3230] [3231] [3232] Underfull \hbox (badness 10000) in paragraph at lines 5592--5595 [][][]\T1/zi4/m/it/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3233] [3234] [3235] [3236] [3237] [3238] [3239] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 [][][]\T1/zi4/m/it/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3240] [3241] [3242] [3243] Underfull \hbox (badness 1490) in paragraph at lines 6248--6259 [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/it/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3244] Underfull \hbox (badness 10000) in paragraph at lines 6312--6314 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3245] [3246] [3247] [3248] [3249] [3250] Underfull \hbox (badness 10000) in paragraph at lines 6724--6726 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3251] [3252] [3253] [3254] Underfull \hbox (badness 10000) in paragraph at lines 6995--7002 [][][]\T1/zi4/m/it/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3255] [3256] [3257] [3258] Underfull \hbox (badness 10000) in paragraph at lines 7255--7260 [][][]\T1/zi4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3259] [3260] [3261] [3262] [3263] [3264] [3265] [3266] [3267] [3268] [3269] [3270] [3271] [3272] [3273] [3274] [3275] [3276] [3277] Underfull \hbox (badness 10000) in paragraph at lines 8538--8540 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3278] [3279] [3280] [3281] [3282] Underfull \hbox (badness 10000) in paragraph at lines 8824--8831 [][][]\T1/zi4/m/it/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3283] [3284] [3285] [3286] [3287] [3288] [3289] [3290] Underfull \hbox (badness 10000) in paragraph at lines 9345--9352 [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3291] [3292] [3293] [3294] [3295] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9707 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix.1} ) has been already used, duplicate ignored \relax l.9707 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3296] [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] Underfull \hbox (badness 1596) in paragraph at lines 10484--10510 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3308] [3309] Underfull \hbox (badness 1490) in paragraph at lines 10600--10606 [][][]\T1/zi4/m/it/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 reStruct[][][][]\T1/ptm/m/n/10 , [3310] [3311] [3312] Underfull \hbox (badness 10000) in paragraph at lines 10841--10843 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3313] [3314] [3315] [3316] [3317] [3318] [3319] [3320] [3321] [3322] [3323] [3324] [3325] [3326] [3327] [3328] [3329] [3330] [3331] [3332] [3333] [3334] [3335] [3336] [3337] [3338] [3339] [3340] [3341] [3342] [3343] [3344] [3345] [3346] [3347] [3348] [3349] [3350] [3351] [3352] [3353] [3354] [3355] Underfull \hbox (badness 1286) in paragraph at lines 13744--13751 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ it/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/it/10 inner []\T1/ptm/m/n/1 0 or [3356] [3357] [3358] [3359] [3360] [3361] [3362] [3363] [3364] [3365] [3366] [3367] [3368] [3369] [3370] [3371] [3372] [3373] [3374] [3375] [3376] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects}) has been already used, duplicate ignored \relax l.15187 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects.1}) has been already used, duplicate ignored \relax l.15187 ...Extract Random Effects}{random.effects} [3377] [3378] [3379] [3380] [3381] [3382] [3383] [3384] [3385] [3386] Underfull \hbox (badness 3884) in paragraph at lines 15826--15830 []\T1/ptm/m/n/10 Charles F. Minto, Thomas W. Schnider and Steven L. Shafer (199 7). Phar-ma-coki- Underfull \hbox (badness 4846) in paragraph at lines 15826--15830 \T1/ptm/m/n/10 net-ics and Phar-ma-co-dy-nam-ics of Remifen-tanil: II. Model Ap -pli-ca-tion. \T1/ptm/m/it/10 Anes-the-si-ol- Underfull \hbox (badness 1953) in paragraph at lines 15826--15830 \T1/ptm/m/it/10 ogy \T1/ptm/b/n/10 86 \T1/ptm/m/n/10 1, 24--33. [][]$\T1/zi4/m/ it/10 https : / / pubs . asahq . org / anesthesiology / article / 86 / 1 / 24 / 35925 / [3387] [3388] Underfull \hbox (badness 1067) in paragraph at lines 15938--15943 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3389] [3390] [3391] [3392] Underfull \hbox (badness 1448) in paragraph at lines 16181--16190 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/it/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3393] [3394] [3395] [3396] [3397] [3398] [3399] [3400] [3401] [3402] Underfull \hbox (badness 1728) in paragraph at lines 16885--16888 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3403] [3404] [3405] [3406] [3407] Underfull \hbox (badness 8056) in paragraph at lines 17219--17228 \T1/zi4/m/it/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/it /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17219--17228 \T1/zi4/m/it/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17219--17228 \T1/zi4/m/it/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3408] [3409] [3410] [3411] [3412] Underfull \hbox (badness 10000) in paragraph at lines 17541--17549 [][][]\T1/zi4/m/it/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varPower[][][][]\T1/ptm/m/n/10 , [3413] [3414] [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] Underfull \hbox (badness 10000) in paragraph at lines 18251--18261 [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18251--18261 [][][]\T1/zi4/m/it/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3423] [3424] [3425] [3426] [3427] Underfull \hbox (badness 5036) in paragraph at lines 18575--18584 [][][]\T1/zi4/m/it/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3428] [3429] [3430] [3431] [3432] [3433] [3434] [3435] [3436] [3437] [3438] [3439] [3440]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom. 1}) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3441] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [3442] [3443] [3444] [3445] [3446] [3447] [3448]) (./rpart-pkg.tex Chapter 27. [3449] [3450] [3451] [3452] [3453] [3454] [3455] [3456] [3457] [3458] Underfull \hbox (badness 10000) in paragraph at lines 771--775 []\T1/ptm/m/n/10 Logical. If []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , adds to the la-bel Underfull \hbox (badness 1348) in paragraph at lines 771--775 \T1/zi4/m/it/10 #events level1/ #events level2/ \T1/ptm/m/n/10 etc. for method []\T1/zi4/m/it/10 class[]\T1/ptm/m/n/10 , \T1/zi4/m/it/10 n \T1/ptm/m/n/10 for [3459] [3460] [3461] [3462] [3463] [3464] [3465] [3466] [3467] [3468] [3469] [3470] [3471] [3472] [3473] [3474] [3475] [3476] [3477]) (./spatial-pkg.tex [3478] Chapter 28. [3479] [3480] [3481] [3482] [3483] [3484] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3485] [3486] [3487] [3488] [3489] [3490] [3491] [3492] [3493] [3494] [3495] [3496] [3497]) (./survival-pkg.tex [3498] Chapter 29. [3499] [3500] [3501] [3502] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3503] [3504] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml.1}) h as been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3505] [3506] [3507] [3508] [3509] [3510] [3511] [3512] [3513] [3514] [3515] Underfull \hbox (badness 1097) in paragraph at lines 1110--1112 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. 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(rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) pdfTeX warning (dest): name{Rfn.tree} has been referenced but does not exist, r eplaced by a fixed one pdfTeX warning (dest): name{Rfn.memory.limit} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.viewports} has been referenced but does not exi st, replaced by a fixed one pdfTeX warning (dest): name{Rfn.xyplot.zoo} has been referenced but does not ex ist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.ellipsePoints} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.ellipse} has been referenced but does not exist , replaced by a fixed one pdfTeX warning (dest): name{Rfn.cluster.stats} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.chorizon} has been referenced but does not exis t, replaced by a 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This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./fullrefman.tex LaTeX2e <2022-06-01> patch level 5 L3 programming layer <2022-12-17> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2021/10/04 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (../../share/texmf/tex/latex/Rd.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. 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[3] [4] Underfull \hbox (badness 6252) in paragraph at lines 143--151 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . 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Val-ues [8] [9] [10] Underfull \hbox (badness 2556) in paragraph at lines 571--577 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [11] [12] [13] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [24] [25] [26] Underfull \hbox (badness 10000) in paragraph at lines 1611--1617 [27] [28] [29] [30] [31] Underfull \hbox (badness 1242) in paragraph at lines 2023--2026 []\T1/ptm/m/n/10 Since \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.3.0, the \T1/ptm/m/it/ 10 de-fault \T1/ptm/m/n/10 method will call []\T1/zi4/m/n/10 as.data.frame.vect or() []\T1/ptm/m/n/10 for atomic (as by Underfull \hbox (badness 10000) in paragraph at lines 2027--2031 []\T1/ptm/m/n/10 Direct calls to []\T1/zi4/m/n/10 as.data.frame.() []\T1 /ptm/m/n/10 are still pos-si-ble (base pack-age!), for Underfull \hbox (badness 5490) in paragraph at lines 2027--2031 \T1/ptm/m/n/10 12 atomic base classes, but will dep-re-cated (al-ready vis-i-bl y by set-ting en-vi-ron-ment Underfull \hbox (badness 10000) in paragraph at lines 2027--2031 \T1/ptm/m/n/10 vari-able []\T1/zi4/m/n/10 _R_CHECK_AS_DATA_FRAME_EXPLICIT_METHO D_ []\T1/ptm/m/n/10 to non-empty) where call-ing [32] [33] [34] [35] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2267--2267 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [36] [37] [38] [39] [40] [41] [42] [43] [44] Underfull \hbox (badness 1721) in paragraph at lines 2933--2937 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [45] [46] [47] [48] [49] [50] [51] Underfull \hbox (badness 2538) in paragraph at lines 3413--3416 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] Underfull \hbox (badness 10000) in paragraph at lines 4209--4211 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Underfull \hbox (badness 2521) in paragraph at lines 5505--5507 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6770--6770 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] Underfull \hbox (badness 1303) in paragraph at lines 7663--7670 []\T1/zi4/m/n/10 file []\T1/ptm/m/n/10 can be used with []\T1/zi4/m/n/10 descri ption = "clipboard" []\T1/ptm/m/n/10 in mode []\T1/zi4/m/n/10 "r" []\T1/ptm/m/n /10 only. This reads the Underfull \hbox (badness 2261) in paragraph at lines 7674--7679 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [112] [113] Underfull \vbox (badness 10000) has occurred while \output is active [114] [115] [116] [117] [118] [119] [120] [121] Underfull \hbox (badness 2096) in paragraph at lines 8353--8357 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [122] [123] Underfull \hbox (badness 2351) in paragraph at lines 8468--8471 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [124] [125] [126] [127] [128] Underfull \hbox (badness 4479) in paragraph at lines 8785--8796 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [129] [130] [131] [132] [133] Underfull \hbox (badness 1629) in paragraph at lines 9215--9227 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9215--9227 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1178) in paragraph at lines 10063--10067 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] Underfull \hbox (badness 2744) in paragraph at lines 12397--12399 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [179] [180] [181] [182] [183] [184] [185] Underfull \vbox (badness 10000) has occurred while \output is active [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] Underfull \hbox (badness 2253) in paragraph at lines 14601--14603 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see Underfull \hbox (badness 1490) in paragraph at lines 14636--14639 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [209] Underfull \hbox (badness 1565) in paragraph at lines 14718--14722 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [210] Underfull \hbox (badness 4927) in paragraph at lines 14769--14771 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [211] [212] Underfull \hbox (badness 3148) in paragraph at lines 14871--14876 [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.fi les[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 help[][][][]\T1/ptm/m/n/10 ; [ ][][]\T1/zi4/m/n/10 RShowDoc[][][] []\T1/ptm/m/n/10 call []\T1/zi4/m/n/10 file. show() []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 type = "text"[]\T1/ptm/m/n/10 . Co n-sider Underfull \hbox (badness 1466) in paragraph at lines 14918--14921 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [213] Underfull \vbox (badness 1418) has occurred while \output is active [214] Underfull \hbox (badness 10000) in paragraph at lines 15049--15053 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15060--15063 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [215] [216] [217] [218] Underfull \hbox (badness 3965) in paragraph at lines 15357--15361 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] Underfull \hbox (badness 4429) in paragraph at lines 16146--16149 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [231] Underfull \hbox (badness 10000) in paragraph at lines 16252--16254 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [232] Underfull \hbox (badness 2035) in paragraph at lines 16325--16329 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [233] [234] [235] [236] [237] [238] [239] [240] [241] Underfull \hbox (badness 2452) in paragraph at lines 16938--16942 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 16938--16942 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [242] [243] [244] Underfull \hbox (badness 1092) in paragraph at lines 17111--17116 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [245] [246] [247] Underfull \hbox (badness 6741) in paragraph at lines 17364--17368 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [248] [249] [250] Underfull \vbox (badness 10000) has occurred while \output is active [251] [252] [253] [254] [255] [256] [257] Underfull \vbox (badness 10000) has occurred while \output is active [258] Underfull \vbox (badness 10000) has occurred while \output is active [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] Underfull \hbox (badness 1478) in paragraph at lines 18857--18860 []\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [269] [270] [271] Underfull \hbox (badness 10000) in paragraph at lines 19127--19129 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / [272] Underfull \hbox (badness 2088) in paragraph at lines 19133--19142 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [273] [274] [275] [276] [277] [278] [279] [280] Underfull \hbox (badness 1442) in paragraph at lines 19741--19743 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [281] [282] [283] [284] [285] Underfull \hbox (badness 10000) in paragraph at lines 20074--20080 [286] [287] [288] Underfull \hbox (badness 1248) in paragraph at lines 20319--20322 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [289] [290] [291] [292] [293] Underfull \hbox (badness 4739) in paragraph at lines 20582--20584 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [294] [295] [296] [297] [298] [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] [309] Underfull \hbox (badness 2469) in paragraph at lines 21666--21671 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [310] Underfull \hbox (badness 1675) in paragraph at lines 21753--21762 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 21763--21776 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the [311] Underfull \hbox (badness 10000) in paragraph at lines 21811--21814 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21811--21814 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [312] [313] Underfull \hbox (badness 1014) in paragraph at lines 21945--21950 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [314] [315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325] Underfull \hbox (badness 1264) in paragraph at lines 22792--22800 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: Underfull \hbox (badness 4441) in paragraph at lines 22826--22829 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] Underfull \hbox (badness 5231) in paragraph at lines 23631--23633 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [338] [339] [340] [341] [342] [343] [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] Underfull \hbox (badness 10000) in paragraph at lines 24724--24730 [][]$\T1/zi4/m/n/10 https : / / zlib . net/$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m /n/10 https : / / en . wikipedia . org / wiki / Gzip$[][]\T1/ptm/m/n/10 , [][]$ \T1/zi4/m/n/10 http : / / www . bzip . org/$[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 24724--24730 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , [][]$\T1/zi4/m/n/10 https : / / tukaani . org / xz/$[][] \T1/ptm/m/n/ 10 and [][]$\T1/zi4/m/n/10 https : [354] [355] [356] [357] [358] [359] [360] Underfull \hbox (badness 2790) in paragraph at lines 25220--25223 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25220--25223 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [361] [362] [363] [364] [365] Underfull \hbox (badness 1194) in paragraph at lines 25543--25546 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [366] [367] [368] Underfull \hbox (badness 2368) in paragraph at lines 25750--25756 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [369] [370] [371] [372] [373] Underfull \hbox (badness 10000) in paragraph at lines 26140--26143 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [374] [375] [376] [377] [378] [379] [380] [381] [382] Underfull \hbox (badness 10000) in paragraph at lines 26761--26763 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [383] [384] [385] [386] [387] [388] [389] Underfull \hbox (badness 2443) in paragraph at lines 27249--27257 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 1881) in paragraph at lines 27667--27670 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 27692--27694 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [396] [397] Underfull \hbox (badness 2142) in paragraph at lines 27833--27837 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 27890--27895 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [398] [399] [400] Underfull \hbox (badness 10000) in paragraph at lines 28184--28190 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28184--28190 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28184--28190 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 10000) in paragraph at lines 28197--28200 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence[][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/pt m/m/n/10 and [401] Underfull \hbox (badness 2689) in paragraph at lines 28223--28225 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see Underfull \hbox (badness 10000) in paragraph at lines 28265--28270 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28271--28282 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28271--28282 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28283--28286 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [402] [403] [404] [405] [406] [407] Underfull \hbox (badness 10000) in paragraph at lines 28692--28696 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 28839--28842 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [410] Underfull \hbox (badness 7925) in paragraph at lines 28920--28924 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 28920--28924 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 28925--28934 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [411] [412] [413] [414] [415] [416] [417] [418] [419] [420] [421] [422] [423] [424] Underfull \hbox (badness 2726) in paragraph at lines 29929--29932 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [425] [426] [427] [428] [429] [430] [431] [432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] Underfull \vbox (badness 10000) has occurred while \output is active [443] [444] [445] [446] [447] [448] [449] [450] Underfull \hbox (badness 1533) in paragraph at lines 31726--31729 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [451] [452] [453] Underfull \hbox (badness 1163) in paragraph at lines 31889--31900 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] Underfull \hbox (badness 10000) in paragraph at lines 33555--33559 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 33555--33559 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 33576--33578 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 33579--33583 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [478] [479] [480] [481] [482] [483] [484] [485] [486] Underfull \hbox (badness 1655) in paragraph at lines 34175--34177 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [487] [488] [489] [490] [491] [492] [493] [494] [495] [496] [497] [498] [499] [500] [501] [502] [503] [504] Underfull \hbox (badness 2261) in paragraph at lines 35381--35386 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [505] [506] [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] Underfull \hbox (badness 3668) in paragraph at lines 36416--36420 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [519] Underfull \hbox (badness 10000) in paragraph at lines 36507--36518 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530] [531] [532] [533] [534] [535] [536] Underfull \vbox (badness 10000) has occurred while \output is active [537] [538] [539] [540] [541] Underfull \hbox (badness 10000) in paragraph at lines 38052--38054 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [542] Underfull \vbox (badness 10000) has occurred while \output is active [543] [544] [545] [546] [547] Underfull \hbox (badness 2913) in paragraph at lines 38472--38476 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [548] [549] [550] Underfull \hbox (badness 1072) in paragraph at lines 38718--38722 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 38723--38727 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', [551] Underfull \hbox (badness 10000) in paragraph at lines 38763--38769 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 38763--38769 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 38763--38769 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 38778--38785 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 38778--38785 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 38778--38785 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 38778--38785 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [552] [553] [554] Underfull \hbox (badness 2644) in paragraph at lines 39013--39017 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [555] [556] [557] Underfull \hbox (badness 1142) in paragraph at lines 39170--39176 []\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the []\T1/zi4/m/n/10 fo rmat []\T1/ptm/m/n/10 meth-ods is []\T1/zi4/m/n/10 "%Y-%m-%d [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] [570] [571] [572] [573] [574] [575] [576] Underfull \hbox (badness 1158) in paragraph at lines 40529--40531 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] Underfull \hbox (badness 1137) in paragraph at lines 41124--41130 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41143--41148 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [587] Underfull \hbox (badness 1616) in paragraph at lines 41263--41268 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [588] [589] [590] [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 1472) in paragraph at lines 41810--41813 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [597] [598] [599] [600] [601] [602] [603] [604] [605] [606] [607] [608] [609] Underfull \hbox (badness 10000) in paragraph at lines 42736--42740 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/n/10 bin []\T1/ptm/m/n/10 can have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4/ m/n/10 length(bin) > [610] [611] [612] [613] Underfull \hbox (badness 10000) in paragraph at lines 42995--42998 [][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [ ][]$https : / / developer . r-[]project . org / [614] [615] [616] Underfull \hbox (badness 10000) in paragraph at lines 43179--43183 [][][]\T1/zi4/m/n/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 taskCallback Manager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer . [617] [618] [619] [620] [621] [622] [623] [624] Underfull \hbox (badness 10000) in paragraph at lines 43828--43831 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[ ]zones / [625] [626] [627] [628] [629] [630] Underfull \vbox (badness 10000) has occurred while \output is active [631] [632] [633] [634] [635] [636] [637] Underfull \hbox (badness 1990) in paragraph at lines 44749--44757 []\T1/zi4/m/n/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 44749--44757 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/n/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [638] [639] [640] [641] [642] [643] [644] [645] [646] [647] [648] [649] [650] [651] [652] Underfull \hbox (badness 2452) in paragraph at lines 45746--45752 [][][]\T1/zi4/m/n/10 file[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.acc ess[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.append[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/n/10 file.copy[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 file.create[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.exists[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [653] [654] [655] [656] [657] Underfull \hbox (badness 3668) in paragraph at lines 46144--46146 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di- ately, even if [658] [659] Underfull \hbox (badness 2401) in paragraph at lines 46274--46278 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/n/10 options[][][]("w arn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [660] [661] Underfull \hbox (badness 3492) in paragraph at lines 46398--46400 []\T1/zi4/m/n/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 months []\T1/pt m/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [662] Underfull \hbox (badness 2111) in paragraph at lines 46484--46489 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/n/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [663] [664] [665] [666] Underfull \hbox (badness 4001) in paragraph at lines 46730--46732 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/n/10 https : / / developer . [667] [668] [669] [670] [671] Underfull \hbox (badness 5417) in paragraph at lines 47095--47099 []\T1/zi4/m/n/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-ren tly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [672] Underfull \hbox (badness 10000) in paragraph at lines 47156--47160 []\T1/zi4/m/n/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-da rd' reg-exps, in-clud-ing el-e-ments named [673]) (./compiler-pkg.tex [674] Chapter 2. [675] [676] [677] [678]) (./datasets-pkg.tex Chapter 3. [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] [690] [691] [692] [693] [694] Underfull \hbox (badness 1097) in paragraph at lines 1037--1041 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [695] [696] [697] [698] [699] [700] [701] [702] [703] [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] [727] [728] [729] [730] [731] [732] [733] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3508--3508 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [734] [735] [736] [737] [738] [739] [740] [741] [742] [743] [744] [745] [746] [747] [748] [749] [750] [751] [752] [753] [754]) (./grDevices-pkg.tex Chapter 4. [755] [756] [757] [758] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/n/10 c(mi, ma, n.)[]\ T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 298--303 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/n/10 axisTicks[][][]() []\T1/ ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/n/10 CreateAtVector() []\T1/p tm/m/n/10 in Underfull \hbox (badness 1852) in paragraph at lines 298--303 \T1/ptm/m/n/10 `\T1/zi4/m/n/10 /src/main/plot.c\T1/ptm/m/n/10 ' which is also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t ion [759] [760] [761] [762] [763] [764] [765] [766] [767] Underfull \hbox (badness 1424) in paragraph at lines 899--901 [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) an d []\T1/zi4/m/n/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i-fied as [768] [769] [770] [771] [772] Underfull \hbox (badness 5175) in paragraph at lines 1193--1195 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [773] [774] Underfull \hbox (badness 2512) in paragraph at lines 1312--1314 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/n/10 https : / / web . arc hive . org / web / 20190613001950 / http : / / efg2 . com / [775] [776] [777] [778] Underfull \hbox (badness 1490) in paragraph at lines 1612--1617 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/n/10 rasterImage[][][] []\T1/ptm/m/n/10 and [ ][][]\T1/zi4/m/n/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues []\T 1/zi4/m/n/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1625--1629 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [779] [780] [781] [782] [783] [784] Underfull \hbox (badness 1325) in paragraph at lines 2040--2050 []\T1/zi4/m/n/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngmono"[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngalph a"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/1 0 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp32b"[]\T1/ptm/m/n/10 , [785] [786] Underfull \hbox (badness 10000) in paragraph at lines 2152--2154 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [787] [788] Underfull \hbox (badness 6758) in paragraph at lines 2338--2341 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [789] [790] [791] [792] Underfull \vbox (badness 10000) has occurred while \output is active [793] [794] [795] [796] [797] [798] [799] [800] Underfull \hbox (badness 10000) in paragraph at lines 3089--3090 [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] [812] [813] [814] [815] Underfull \vbox (badness 10000) has occurred while \output is active [816] Underfull \hbox (badness 10000) in paragraph at lines 4165--4168 []\T1/ptm/m/n/10 For use with []\T1/zi4/m/n/10 onefile = FALSE []\T1/ptm/m/n/10 give a C in-te-ger for-mat such as [817] [818] [819] [820] [821] [822] [823] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4681 \aliasA{symbol}{plotmath}{symbol} [824] [825] [826] [827] Underfull \vbox (badness 10000) has occurred while \output is active [828] [829] Underfull \hbox (badness 1584) in paragraph at lines 5067--5069 []\T1/ptm/m/n/10 For type []\T1/zi4/m/n/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1/ zi4/m/n/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5071--5078 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [830] [831] [832] [833] Underfull \hbox (badness 1377) in paragraph at lines 5379--5384 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [834] Underfull \hbox (badness 1418) in paragraph at lines 5455--5462 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\ T1/zi4/m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m /n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvet ica-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 1755) in paragraph at lines 5473--5475 []\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East Asian lan-guages -- see [835] Underfull \hbox (badness 1377) in paragraph at lines 5584--5589 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/n/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [836] Underfull \hbox (badness 7344) in paragraph at lines 5653--5655 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [837] [838] Underfull \hbox (badness 2035) in paragraph at lines 5791--5800 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5791--5800 \T1/ptm/m/n/10 vided: []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica-Na rrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5791--5800 []\T1/zi4/m/n/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Pal atino" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 "Times"[]\T1/ptm/m/n/10 ; []\T1/zi 4/m/n/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "URWBookman"[]\T1/ptm/m /n/10 , [839] [840] Underfull \hbox (badness 10000) in paragraph at lines 5859--5861 []\T1/zi4/m/n/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/z i4/m/n/10 https : / / ftp . gnu . org / pub / non-[]gnu / [841] [842] Underfull \hbox (badness 1546) in paragraph at lines 6004--6012 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/n/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 title[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fg[]\T1/ptm/m/n/10 , [] \T1/zi4/m/n/10 width[]\T1/ptm/m/n/10 , [843] [844] [845] [846] [847] [848] [849] [850] Underfull \hbox (badness 10000) in paragraph at lines 6543--6546 []\T1/zi4/m/n/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space (r ed/green/blue) into HSV space [851] [852] [853] [854] [855] [856] [857] [858] [859] [860] [861] [862] Underfull \hbox (badness 1189) in paragraph at lines 7372--7374 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [863] Underfull \hbox (badness 10000) in paragraph at lines 7477--7479 []\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for CJ K lan-guages and [864] [865] [866] [867] [868] Underfull \hbox (badness 3780) in paragraph at lines 7791--7797 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/n /10 "AvantGarde"[]\T1/ptm/m/n/10 , [869] [870] [871] [872] [873]) (./graphics-pkg.tex [874] Chapter 5. [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] [887] [888] [889] [890] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1034--1034 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [891] [892] [893] [894] [895] Underfull \hbox (badness 4634) in paragraph at lines 1408--1411 [][][]\T1/zi4/m/n/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready work s nowa-days with data.frames; [][][]\T1/zi4/m/n/10 boxplot.formula[][][][]\T1/p tm/m/n/10 , [896] [897] [898] [899] [900] [901] [902] [903] [904] [905] [906] [907] [908] [909] [910] [911] Underfull \hbox (badness 1728) in paragraph at lines 2388--2390 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/n/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [912] Underfull \hbox (badness 1009) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [913] [914] [915] [916] [917] [918] [919] [920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931] [932] [933] Underfull \vbox (badness 10000) has occurred while \output is active [934] Underfull \vbox (badness 10000) has occurred while \output is active [935] [936] [937] [938] [939] [940] [941] [942] [943] [944] [945] [946] Underfull \hbox (badness 3229) in paragraph at lines 4715--4720 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [947] [948] [949] [950] [951] Underfull \hbox (badness 1107) in paragraph at lines 5144--5150 []\T1/ptm/m/n/10 is []\T1/zi4/m/n/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sca led to user co-or-di-nates. Note that []\T1/zi4/m/n/10 c([][]strwidth[][][](ch) , [952] Underfull \hbox (badness 10000) in paragraph at lines 5273--5276 [953] Underfull \hbox (badness 10000) in paragraph at lines 5334--5336 [954 ] [955 ] [956] [957] [958] [959] [960] [961] [962] [963] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6005 \aliasA{plot}{plot.default}{plot} [964] [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] [976] [977] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6909--6910 [][] [978 ] [979] [980] [981] [982] [983] [984] [985] [986] [987] [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] Underfull \hbox (badness 4954) in paragraph at lines 9001--9003 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /n/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9003--9005 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/n/10 par (c("font.lab", "cex.lab", [1010] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9083 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9083 \HeaderA{units}{Graphical Units}{units} [1011] [1012] [1013] [1014]) (./grid-pkg.tex Chapter 6. [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] Underfull \hbox (badness 2680) in paragraph at lines 550--553 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/n/10 preDrawDetails []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal-c u-la-tion of [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] Underfull \hbox (badness 4279) in paragraph at lines 1187--1196 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/n/10 pushViewport[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/n/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 seekViewpo rt[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 upViewport[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 unit[][][][]\T1/ptm/m/n/10 , [1033] Underfull \vbox (badness 10000) has occurred while \output is active [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] [1043] [1044] [1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] [1062] Underfull \hbox (badness 10000) in paragraph at lines 3102--3104 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] [1076] [1077] Underfull \vbox (badness 10000) has occurred while \output is active [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] Underfull \hbox (badness 1067) in paragraph at lines 4840--4843 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1091] [1092] [1093] [1094] [1095] Underfull \hbox (badness 7256) in paragraph at lines 5191--5193 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1096] [1097] [1098] [1099] [1100] [1101] [1102] Underfull \hbox (badness 2142) in paragraph at lines 5645--5649 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/n/10 gridGTreeCoords []\T1/ptm/m/n/1 0 a list of ei-ther []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1103] [1104] Underfull \hbox (badness 4699) in paragraph at lines 5727--5732 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 ob -ject (a list of lists with com-po-nents []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 an d []\T1/zi4/m/n/10 y[]\T1/ptm/m/n/10 ) or a [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112] [1113] [1114] [1115] [1116] [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134]) (./methods-pkg.tex Chapter 7. [1135] [1136] [1137] [1138] [1139] [1140] [1141] [1142] Underfull \vbox (badness 10000) has occurred while \output is active [1143] Underfull \vbox (badness 10000) has occurred while \output is active [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] Underfull \hbox (badness 2237) in paragraph at lines 1385--1387 []\T1/ptm/m/n/10 The class []\T1/zi4/m/n/10 "className" []\T1/ptm/m/n/10 ex-ten ds []\T1/zi4/m/n/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/n/1 0 "package"[]\T1/ptm/m/n/10 , also of class [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] Underfull \hbox (badness 10000) in paragraph at lines 1981--1986 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m/n/ 10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1981--1986 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m /n/10 it calls []\T1/zi4/m/n/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1161] [1162] [1163] Underfull \hbox (badness 2213) in paragraph at lines 2213--2218 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/n/10 where = [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 2573--2576 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/n/10 setGeneric[][][] []\ T1/ptm/m/n/10 and [][][]\T1/zi4/m/n/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 c re-ate ob-jects of class [1169] [1170] Underfull \hbox (badness 1132) in paragraph at lines 2713--2717 []\T1/ptm/m/n/10 In []\T1/zi4/m/n/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi4 /m/n/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/n/10 package []\T1/ptm/m/n/10 sl ot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2745--2750 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/n/10 removeGeneric []\T1/ptm/m/n/10 r e-moves the func-tion it-self; []\T1/zi4/m/n/10 removeMethods []\T1/ptm/m/n/10 re-stores the [1171] [1172] [1173] [1174] [1175] [1176] [1177] Underfull \hbox (badness 1102) in paragraph at lines 3302--3304 []\T1/zi4/m/n/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1178] [1179] [1180] [1181] [1182] Underfull \hbox (badness 10000) in paragraph at lines 3641--3650 []\T1/ptm/m/n/10 The [1183] [1184] Underfull \hbox (badness 10000) in paragraph at lines 3761--3762 [] \T1/zi4/m/n/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longit ude = "numeric", [1185] Underfull \hbox (badness 10000) in paragraph at lines 3845--3846 []\T1/zi4/m/n/10 Currency <- setClass("Currency", slots = c(unit = "character") , contains = [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] Underfull \hbox (badness 1769) in paragraph at lines 4476--4482 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/n/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4476--4482 []\T1/zi4/m/n/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [] [][]\T1/zi4/m/n/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion use d by [1194] [1195] [1196] [1197] [1198] [1199] [1200] [1201] [1202] Underfull \vbox (badness 10000) has occurred while \output is active [1203] Underfull \vbox (badness 10000) has occurred while \output is active [1204] [1205] [1206] Underfull \hbox (badness 4036) in paragraph at lines 5445--5448 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/n/10 "PossibleMethod" []\T1/ptm/m/ n/10 the method to use in re-sponse to a [1207] Underfull \hbox (badness 3803) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1208] [1209] [1210] Underfull \hbox (badness 1087) in paragraph at lines 5752--5757 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1211] [1212] [1213] [1214] [1215] [1216] [1217] [1218] Underfull \hbox (badness 1675) in paragraph at lines 6459--6465 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/n/10 externalRef Method(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1219] [1220] [1221] [1222] Underfull \vbox (badness 10000) has occurred while \output is active [1223] [1224] [1225] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6981 \aliasA{S4}{S3Part}{S4} [1226] [1227] [1228] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7237 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7239 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7240 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7242 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7243 \aliasA{Summary}{S4groupGeneric}{Summary} [1229] Underfull \hbox (badness 2050) in paragraph at lines 7304--7308 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1230] [1231] Underfull \hbox (badness 1286) in paragraph at lines 7492--7494 []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 .selectSuperClasses() []\T1/ptm/m/n/10 on ly, a [][][]\T1/zi4/m/n/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, t yp-i-cally [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] Underfull \hbox (badness 1852) in paragraph at lines 10572--10576 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1272] [1273] [1274]) (./parallel-pkg.tex Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [][] RNG[][][]: see [1275] [1276] [1277] [1278] Underfull \hbox (badness 1320) in paragraph at lines 301--304 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1279] [1280] [1281] [1282] [1283] [1284] [1285] [1286] [1287] [1288] [1289] [1290] [1291] [1292] [1293] [1294] Underfull \hbox (badness 3386) in paragraph at lines 1394--1397 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/n/10 .Random.seed []\T1/ptm/m/n/10 when the [1295] [1296] [1297]) (./splines-pkg.tex [1298] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 \T1/ptm/ m/n/10 and William N. Ven-ables [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] [1311] [1312]) (./stats-pkg.tex Chapter 10. [1313] [1314] [1315] [1316] [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325] Underfull \hbox (badness 1412) in paragraph at lines 892--894 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/n/10 l m []\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 aov[]\T1/ptm/m/n/10 , or a for-mula for [1326] [1327] [1328] [1329] [1330] [1331] [1332] Underfull \hbox (badness 2503) in paragraph at lines 1374--1377 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1333] [1334] [1335] [1336] [1337] [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] [1346] [1347] [1348] [1349] [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] Underfull \hbox (badness 2503) in paragraph at lines 3537--3540 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1365] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3649. [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] [1379] [1380] [1381] [1382] [1383] Underfull \hbox (badness 3989) in paragraph at lines 4794--4801 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 2556) in paragraph at lines 5435--5438 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/n/10 "circular"[] \T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "fi lter"[]\T1/ptm/m/n/10 . For [1393] [1394] [1395] [1396] [1397] [1398] Underfull \hbox (badness 2503) in paragraph at lines 5849--5853 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1399] [1400] [1401] [1402] [1403] [1404] [1405] [1406] [1407] [1408] [1409] [1410] Underfull \hbox (badness 7081) in paragraph at lines 6643--6646 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/n/10 "hclust" []\T1/ptm/m/n/10 ca n be con-verted to class []\T1/zi4/m/n/10 "dendrogram" []\T1/ptm/m/n/10 us-ing method Underfull \hbox (badness 10000) in paragraph at lines 6647--6649 []\T1/zi4/m/n/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro-g ram []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1411] Underfull \vbox (badness 10000) has occurred while \output is active [1412] [1413] [1414] [1415] Underfull \vbox (badness 10000) has occurred while \output is active [1416] [1417] [1418] Underfull \vbox (badness 10000) has occurred while \output is active [1419] [1420] [1421] [1422] [1423] Underfull \hbox (badness 10000) in paragraph at lines 7522--7525 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/n/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1424] [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] Underfull \vbox (badness 10000) has occurred while \output is active [1444] [1445] [1446] [1447] [1448] Underfull \hbox (badness 2626) in paragraph at lines 9217--9220 []\T1/ptm/m/n/10 Either []\T1/zi4/m/n/10 "convolution" []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1449] [1450] Underfull \hbox (badness 2503) in paragraph at lines 9324--9328 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1451] [1452] [1453] [1454] [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] [1463] [1464] [1465] [1466] [1467] [1468] [1469] Underfull \hbox (badness 4518) in paragraph at lines 10676--10681 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1470] [1471] [1472] [1473] [1474] Underfull \hbox (badness 2142) in paragraph at lines 11037--11040 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11056--11059 []\T1/ptm/m/n/10 When []\T1/zi4/m/n/10 trace []\T1/ptm/m/n/10 is true, calls to [][][]\T1/zi4/m/n/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-er-a-tion. Hence, [1475] Underfull \hbox (badness 1708) in paragraph at lines 11118--11122 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1476] [1477] [1478] [1479] [1480] Underfull \hbox (badness 1694) in paragraph at lines 11514--11517 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.11995 \aliasA{hat}{influence.measures}{hat} [1489] [1490] Underfull \hbox (badness 1484) in paragraph at lines 12137--12139 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/n/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1491] [1492] [1493] [1494] [1495] [1496] [1497] [1498] [1499] Underfull \hbox (badness 10000) in paragraph at lines 12739--12741 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/n/10 solve.de fault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/n/10 SSinit = [1500] [1501] [1502] [1503] [1504] Underfull \hbox (badness 2894) in paragraph at lines 13075--13079 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1505] [1506] [1507] [1508] [1509] [1510] Underfull \hbox (badness 1496) in paragraph at lines 13498--13504 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 4518) in paragraph at lines 13896--13901 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 4518) in paragraph at lines 14556--14561 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1527] [1528] Underfull \hbox (badness 6412) in paragraph at lines 14694--14698 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/n/10 (surface = "inte rpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14701--14703 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/n/10 family []\T1/ptm/m/n/10 is [1529] [1530] [1531] [1532] [1533] [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] Underfull \hbox (badness 2503) in paragraph at lines 15777--15781 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1546] [1547] [1548] [1549] [1550] [1551] [1552] Underfull \hbox (badness 10000) in paragraph at lines 16289--16295 []\T1/zi4/m/n/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/n/ 10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16289--16295 []\T1/zi4/m/n/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 model.re sponse(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/n/10 model.offset []\T1/ ptm/m/n/10 sums any terms [1553] [1554] [1555] [1556] [1557] [1558] [1559] [1560] [1561] [1562] [1563] [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] [1577] Underfull \hbox (badness 1158) in paragraph at lines 17944--17947 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/n/10 nls []\T1 /ptm/m/n/10 as the data ar-gu-ment. The ac- [1578] [1579] Underfull \vbox (badness 10000) has occurred while \output is active [1580] Underfull \vbox (badness 10000) has occurred while \output is active [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] [1589] [1590] [1591] [1592] [1593] Underfull \hbox (badness 1377) in paragraph at lines 18978--18983 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 18983--18986 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 18996--19000 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 18996--19000 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/n/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19004--19008 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/n/10 "BFGS"[]\T 1/ptm/m/n/10 , []\T1/zi4/m/n/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/1 0 "SANN" []\T1/ptm/m/n/10 meth-ods if [1594] [1595] [1596] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19229--19229 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Underfull \vbox (badness 10000) has occurred while \output is active [1597] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19232--19232 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1598] [1599] [1600] [1601] [1602] [1603] Underfull \hbox (badness 1337) in paragraph at lines 19691--19694 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1604] [1605] [1606] [1607] [1608] [1609] [1610] [1611] Underfull \hbox (badness 10000) in paragraph at lines 20162--20168 \T1/zi4/m/n/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 s distance", lty = cook.lty, col = cook.col, text.col [1612] [1613] [1614] [1615] [1616] Underfull \hbox (badness 1194) in paragraph at lines 20500--20503 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1617] [1618] [1619] [1620] [1621] [1622] [1623] Underfull \hbox (badness 2503) in paragraph at lines 20879--20882 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 20906--20908 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/n/10 "Exact Poisson test" [ ]\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 "Comparison of Poisson [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] Underfull \hbox (badness 10000) in paragraph at lines 21985--21991 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/n/10 predict.ar[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 predict.Arima[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1640] [1641] [1642] [1643] [1644] [1645] [1646] [1647] [1648] [1649] [1650] [1651] [1652] [1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 1337) in paragraph at lines 23383--23389 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] Underfull \hbox (badness 1436) in paragraph at lines 23873--23876 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/n/10 max(2, [1670] Underfull \hbox (badness 10000) in paragraph at lines 24014--24015 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . or g / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1671] [1672] [1673] [1674] [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] Underfull \hbox (badness 1824) in paragraph at lines 24986--24992 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 are f irst re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 24986--24992 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25007--25010 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/n/10 y = r unmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/n/10 y[j] = [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \vbox (badness 10000) has occurred while \output is active [1693] [1694] Underfull \hbox (badness 2165) in paragraph at lines 25589--25594 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/n/10 "selfStart" []\T1 /ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/n/10 SSasymp[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1695] [1696] [1697] Underfull \hbox (badness 1867) in paragraph at lines 25799--25801 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 25815--25819 []\T1/ptm/m/n/10 where []\T1/zi4/m/n/10 NN <- [][]nobs[][][](object, use.fallba ck = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 PP <- [1698] [1699] [1700] [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] Underfull \vbox (badness 10000) has occurred while \output is active [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] Underfull \vbox (badness 10000) has occurred while \output is active [1721] [1722] Underfull \hbox (badness 3514) in paragraph at lines 27476--27481 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1723] [1724] [1725] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27710--27710 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1726] Underfull \hbox (badness 3514) in paragraph at lines 27746--27752 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1727] Overfull \hbox (20.23795pt too wide) in paragraph at lines 27803--27803 []\T1/zi4/m/n/9 fmX1 <- nls(conc ~ SSbiexp(time, A1, lrc1, A2, lrc2), data = d atN, control = list(scaleOffset=1))[] Overfull \hbox (11.22874pt too wide) in paragraph at lines 27805--27805 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol=1 e-11, nDcentral=TRUE), trace=TRUE)[] [1728] [1729] [1730] Underfull \hbox (badness 3514) in paragraph at lines 27979--27984 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1731] Underfull \hbox (badness 3514) in paragraph at lines 28066--28071 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1732] Underfull \hbox (badness 3514) in paragraph at lines 28131--28136 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1733] [1734] Underfull \hbox (badness 3514) in paragraph at lines 28225--28230 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1735] Underfull \hbox (badness 6691) in paragraph at lines 28317--28322 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 x[]\ T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] Underfull \hbox (badness 4024) in paragraph at lines 28808--28811 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1744] [1745] [1746] [1747] [1748] [1749] [1750] [1751] [1752] Underfull \hbox (badness 5431) in paragraph at lines 29417--29419 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1753] [1754] [1755] [1756] Underfull \hbox (badness 5431) in paragraph at lines 29627--29630 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1757] [1758] [1759] [1760] [1761] Underfull \hbox (badness 1337) in paragraph at lines 29942--29946 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1762] [1763] [1764] [1765] Underfull \hbox (badness 1616) in paragraph at lines 30261--30264 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1766] [1767] [1768] [1769] [1770] [1771] [1772] [1773] [1774] [1775] [1776] [1777] [1778] [1779] [1780] [1781] [1782] [1783] [1784] Underfull \hbox (badness 3557) in paragraph at lines 31485--31489 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/n/10 extendInt []\T1/ptm/m/n/10 to a non-[ ]\T1/zi4/m/n/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-rect []\T1/zi4/m/n/10 interval = [1785] [1786] [1787] [1788] [1789] [1790] Underfull \hbox (badness 1337) in paragraph at lines 31852--31856 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1791] [1792] [1793] [1794] [1795] [1796] [1797] [1798] Underfull \hbox (badness 1337) in paragraph at lines 32381--32385 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1799] [1800] [1801] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32589--32589 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1802] [1803] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32750--32750 [] \T1/zi4/m/n/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.eps = getOption("ts.eps"), ...)[] [1804] [1805] [1806] [1807] [1808]) (./stats4-pkg.tex Chapter 11. [1809] [1810] [1811] Underfull \vbox (badness 10000) has occurred while \output is active [1812] [1813] [1814] [1815] [1816] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1817] [1818] [1819]) (./tcltk-pkg.tex [1820] Chapter 12. [1821] [1822] [1823] [1824] [1825] [1826] [1827] Underfull \vbox (badness 10000) has occurred while \output is active [1828] Underfull \hbox (badness 1546) in paragraph at lines 671--678 []\T1/zi4/m/n/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-i ng any Tk or Tcl com-mand by sim-ply run-ning [1829] [1830] [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840]) (./tools-pkg.tex Chapter 13. [1841] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1842] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/n/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing will be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1843] [1844] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/n/10 bi bentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatIn Proceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatManual[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/n/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatPhdthesis[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1/zi 4/m/n/10 formatTechreport []\T1/ptm/m/n/10 and [1845] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gin e to use. Over-rides any [1846] [1847] Underfull \hbox (badness 1142) in paragraph at lines 464--468 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1848] [1849] [1850] [1851] [1852] [1853] [1854] [1855] [1856] [1857] [1858] Underfull \hbox (badness 1014) in paragraph at lines 1188--1190 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1194--1196 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [1859] Underfull \hbox (badness 10000) in paragraph at lines 1231--1234 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1231--1234 []\T1/zi4/m/n/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and [ ]\T1/zi4/m/n/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1860] [1861] [1862] [1863] [1864] Underfull \hbox (badness 10000) in paragraph at lines 1606--1609 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/n/10 CRAN_aliases_db[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CR AN_current_db []\T1/ptm/m/n/10 and [1865] [1866] Underfull \hbox (badness 4096) in paragraph at lines 1725--1733 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1735--1737 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1867] [1868] [1869] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1937 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.1938 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1870] [1871] [1872] [1873] [1874] [1875] [1876] Underfull \hbox (badness 3386) in paragraph at lines 2412--2415 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/n/10 as.Rconcordance []\T1/ ptm/m/n/10 searches for strings match-ing the pat-tern of [1877] [1878] Underfull \hbox (badness 4096) in paragraph at lines 2552--2560 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1879] [1880] [1881] [1882] [1883] [1884] [1885] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 3046. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 3047. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 3047. [1886] [1887] [1888] [1889] [1890] Underfull \hbox (badness 1424) in paragraph at lines 3358--3360 []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1891] [1892] [1893] [1894] [1895] [1896] [1897] [1898] [1899] [1900] Underfull \hbox (badness 10000) in paragraph at lines 4074--4076 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1901] [1902] Underfull \hbox (badness 10000) in paragraph at lines 4213--4216 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/it/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/it/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1903] [1904] [1905] [1906] [1907] Underfull \hbox (badness 1796) in paragraph at lines 4571--4576 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/it/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/it/10 type = = [1908] Underfull \hbox (badness 4699) in paragraph at lines 4621--4625 []\T1/ptm/m/n/10 a string, by de-fault empty, of op-tions to []\T1/zi4/m/it/10 msgmerge []\T1/ptm/m/n/10 in ad-di-tion to Underfull \hbox (badness 1946) in paragraph at lines 4621--4625 []\T1/zi4/m/it/10 "--update"[]\T1/ptm/m/n/10 . Since \T1/phv/m/n/10 R \T1/ptm/m /n/10 4.2.0, []\T1/zi4/m/it/10 "--no-wrap" []\T1/ptm/m/n/10 is used when called from [1909] Underfull \hbox (badness 1838) in paragraph at lines 4649--4655 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4649--4655 \T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1910] [1911] [1912] Underfull \hbox (badness 2197) in paragraph at lines 4922--4932 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/it/10 available.packages[][][][]\T1/ptm/m/n/10 : [1913] Underfull \hbox (badness 1571) in paragraph at lines 4988--4992 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1914] [1915] [1916] [1917]) (./utils-pkg.tex [1918] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/it/10 insertions[]\T1/ptm/m/n/10 ', [1919] [1920] [1921] [1922] [1923] [1924] [1925] [1926] [1927] [1928] [1929] Underfull \hbox (badness 10000) in paragraph at lines 729--735 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/it/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/it/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 729--735 []\T1/zi4/m/it/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1930] [1931] Underfull \hbox (badness 3861) in paragraph at lines 934--939 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/it/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/it/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1932] [1933] [1934] Underfull \hbox (badness 10000) in paragraph at lines 1136--1138 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1935] [1936] [1937] Underfull \vbox (badness 10000) has occurred while \output is active [1938] [1939] [1940] [1941] [1942] Underfull \hbox (badness 1371) in paragraph at lines 1664--1666 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1943] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 1734. [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] Underfull \hbox (badness 2057) in paragraph at lines 2384--2386 []\T1/ptm/m/n/10 None for []\T1/zi4/m/it/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1953] Underfull \hbox (badness 2150) in paragraph at lines 2459--2466 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/it/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2459--2466 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [1954] [1955] [1956] [1957] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2736 ... the Clipboard in MS Windows}{clipboard} [1958] [1959] [1960] [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] [1970] [1971] [1972] [1973] [1974] [1975] [1976] Underfull \hbox (badness 6842) in paragraph at lines 4046--4051 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/it/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1977] Underfull \hbox (badness 1430) in paragraph at lines 4109--4113 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/it/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1978] Underfull \hbox (badness 1184) in paragraph at lines 4180--4196 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/it/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4180--4196 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/it/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4180--4196 \T1/ptm/m/n/10 able []\T1/zi4/m/it/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [1979] [1980] Underfull \hbox (badness 10000) in paragraph at lines 4330--4332 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/it/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1981] [1982] [1983] [1984] [1985] [1986] [1987] [1988] [1989] [1990] [1991] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5101 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5101 ...mat Unordered and Ordered Lists}{format} [1992] [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \hbox (badness 1622) in paragraph at lines 5624--5628 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2000] [2001] [2002] [2003] [2004] Underfull \hbox (badness 1448) in paragraph at lines 6003--6008 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 6550. Underfull \hbox (badness 1371) in paragraph at lines 6554--6556 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [2013] [2014] Underfull \hbox (badness 1502) in paragraph at lines 6643--6648 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6643--6648 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2015] [2016] Underfull \hbox (badness 10000) in paragraph at lines 6816--6825 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, [2017] Underfull \hbox (badness 2150) in paragraph at lines 6880--6883 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2018] [2019] Underfull \hbox (badness 3118) in paragraph at lines 7019--7021 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2020] [2021] Underfull \hbox (badness 1325) in paragraph at lines 7198--7202 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/it/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2022] Underfull \hbox (badness 1424) in paragraph at lines 7290--7293 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2023] Underfull \hbox (badness 3219) in paragraph at lines 7361--7368 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/i t/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7361--7368 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7361--7368 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7361--7368 [][][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/it/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7369--7372 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/it/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2024] [2025] Underfull \hbox (badness 1024) in paragraph at lines 7499--7502 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/it/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7532--7537 [][][]\T1/zi4/m/it/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2026] Underfull \hbox (badness 5133) in paragraph at lines 7591--7595 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] [2036] Underfull \hbox (badness 10000) in paragraph at lines 8252--8254 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/it/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2037] [2038] [2039] [2040] [2041] [2042] [2043] [2044] [2045] [2046] [2047] [2048] Underfull \hbox (badness 2310) in paragraph at lines 9016--9021 []\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2049] [2050] [2051] [2052] [2053] [2054] [2055] [2056] Underfull \hbox (badness 1248) in paragraph at lines 9582--9586 []\T1/zi4/m/it/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2057] Underfull \hbox (badness 1789) in paragraph at lines 9662--9664 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2058] [2059] [2060] [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] Underfull \hbox (badness 1097) in paragraph at lines 10514--10517 []\T1/ptm/m/n/10 The name []\T1/zi4/m/it/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2070] [2071] Underfull \hbox (badness 3000) in paragraph at lines 10650--10655 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 read.table[][][][]\T1/ptm/m/n/10 ; [2072] [2073] [2074] [2075] [2076] [2077] [2078] [2079] Underfull \hbox (badness 2134) in paragraph at lines 11244--11249 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 write.table[][][][]\T1/ptm/m/n/10 ; [2080] Underfull \hbox (badness 10000) in paragraph at lines 11300--11305 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11300--11305 []\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/it/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 2469) in paragraph at lines 11798--11802 []\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia , The Free En-cy-clo-pe-dia. Underfull \hbox (badness 3428) in paragraph at lines 11798--11802 [][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac- [2089] [2090] [2091] [2092] [2093] Underfull \hbox (badness 4060) in paragraph at lines 12225--12228 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/it/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/it/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able [2094] Overfull \hbox (18.77168pt too wide) in paragraph at lines 12248--12248 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2095] [2096] [2097] [2098] Underfull \hbox (badness 2150) in paragraph at lines 12503--12505 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac s / manual / [2099] [2100] [2101] Underfull \hbox (badness 10000) in paragraph at lines 12723--12727 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/it/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12756--12762 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12771--12777 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2102] [2103] [2104] Underfull \hbox (badness 1009) in paragraph at lines 12946--12958 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If Underfull \hbox (badness 4779) in paragraph at lines 12986--12988 []\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/it/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and [2105] Underfull \hbox (badness 1077) in paragraph at lines 13016--13023 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2106] [2107] [2108] [2109] [2110] [2111] Underfull \hbox (badness 3780) in paragraph at lines 13438--13444 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/it/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13456--13459 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/it/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2112] [2113] [2114] Underfull \hbox (badness 2302) in paragraph at lines 13661--13663 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2115] [2116] [2117] [2118] [2119] Underfull \hbox (badness 10000) in paragraph at lines 13960--13965 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/it/10 deparse[][][](control = ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 13969--13972 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2120] [2121] [2122] [2123] [2124] [2125] Underfull \hbox (badness 2932) in paragraph at lines 14402--14409 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14402--14409 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/it/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. Ob- [2126] [2127] Underfull \hbox (badness 1460) in paragraph at lines 14566--14574 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/it/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/it/10 tar []\T1/ptm/m/n /10 which used [2128] [2129] Underfull \hbox (badness 6510) in paragraph at lines 14716--14720 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14723--14726 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14723--14726 \T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2130] [2131] [2132] [2133] [2134] [2135] [2136] [2137] [2138] [2139] Underfull \hbox (badness 10000) in paragraph at lines 15403--15408 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/it/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/it/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15403--15408 [][][]\T1/zi4/m/it/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/i t/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15409--15411 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See Underfull \hbox (badness 10000) in paragraph at lines 15468--15471 [][][]\T1/zi4/m/it/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151] [2152] [2153] [2154] [2155]) [2156] [2157] [2158] (./KernSmooth-pkg.tex Chapter 15. [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168]) (./MASS-pkg.tex Chapter 16. [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] [2177] [2178] [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] [2208] Underfull \hbox (badness 10000) in paragraph at lines 2877--2882 []\T1/zi4/m/it/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "negative [2209] [2210] Underfull \hbox (badness 4686) in paragraph at lines 3049--3051 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] [2226] [2227] [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] Underfull \hbox (badness 1117) in paragraph at lines 4829--4832 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2236] Underfull \hbox (badness 1117) in paragraph at lines 4908--4911 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2237] [2238] [2239] [2240] [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6175 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk.1}) h as been already used, duplicate ignored \relax l.6175 ...sical N, P, K Factorial Experiment}{npk} [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] Underfull \hbox (badness 1117) in paragraph at lines 7146--7153 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2267] Underfull \hbox (badness 3138) in paragraph at lines 7217--7223 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2268] [2269] [2270] Underfull \hbox (badness 1910) in paragraph at lines 7396--7399 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/it/10 min(p, [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] Underfull \hbox (badness 4686) in paragraph at lines 8029--8031 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] [2297] [2298] [2299] [2300] [2301] [2302] [2303] [2304] [2305] [2306] [2307] [2308] [2309] [2310] [2311] [2312] [2313] [2314] [2315] [2316]) (./Matrix-pkg.tex Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 35--38 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 35--38 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2317] Underfull \hbox (badness 1769) in paragraph at lines 89--92 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2318] [2319] [2320] [2321] [2322] Underfull \hbox (badness 5119) in paragraph at lines 488--492 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2323] Underfull \hbox (badness 2035) in paragraph at lines 584--587 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/it/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/it/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/it/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2324] [2325] [2326] [2327] Underfull \hbox (badness 1521) in paragraph at lines 859--864 []\T1/ptm/m/n/10 option [][][]\T1/zi4/m/it/10 logical[][][] []\T1/ptm/m/n/10 in -di-cat-ing if the re-sult should be sparse, i.e., for-mally Underfull \hbox (badness 2790) in paragraph at lines 859--864 \T1/ptm/m/n/10 in-her-it-ing from []\T1/zi4/m/it/10 "[][]sparseMatrix[][][]"[]\ T1/ptm/m/n/10 . The de-fault, [][][]\T1/zi4/m/it/10 NA[][][][]\T1/ptm/m/n/10 , de-cides from the Underfull \hbox (badness 1189) in paragraph at lines 859--864 \T1/ptm/m/n/10 ``spar-sity'' of []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 and []\T1/ zi4/m/it/10 y[]\T1/ptm/m/n/10 , see e.g., the \T1/phv/m/n/10 R \T1/ptm/m/n/10 c ode in []\T1/zi4/m/it/10 selectMethod(cbind2, [2328] [2329] Underfull \hbox (badness 10000) in paragraph at lines 1029--1031 []\T1/zi4/m/it/10 signature(from = "CHMfactor", to = "sparseMatrix") []\T1/ptm/ m/n/10 (or equiv-a-lently, []\T1/zi4/m/it/10 to = [2330] [2331] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol}) ha s been already used, duplicate ignored \relax l.1141 ...- 'Matrix' S4 Generic and Methods}{chol} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol.1}) has been already used, duplicate ignored \relax l.1141 ...- 'Matrix' S4 Generic and Methods}{chol} [2332] [2333] [2334] Underfull \hbox (badness 2277) in paragraph at lines 1411--1414 []\T1/ptm/m/n/10 This is a generic func-tion with spe-cial meth-ods for dif-fer -ent types of ma-tri-ces. Use [2335] [2336] [2337] Underfull \hbox (badness 1097) in paragraph at lines 1581--1584 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "MatrixFactorization" []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 "dtrMatrix"[]\T1/ptm/m/n/10 , di-rectly. Class []\T1/zi4 /m/it/10 "dgeMatrix"[]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 1783) in paragraph at lines 1587--1591 []\T1/ptm/m/n/10 Both these fac-tor-iza-tions can \T1/ptm/m/it/10 di-rectly \T1 /ptm/m/n/10 be treated as (tri-an-gu-lar) ma-tri-ces, as they ex-tend pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums}) has been already used, duplicate ignored \relax l.1644 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums.1 }) has been already used, duplicate ignored \relax l.1644 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colMeans} ) has been already used, duplicate ignored \relax l.1645 \aliasA{colMeans}{colSums}{colMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowMeans} ) has been already used, duplicate ignored \relax l.1658 \aliasA{rowMeans}{colSums}{rowMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowSums}) has been already used, duplicate ignored \relax l.1665 \aliasA{rowSums}{colSums}{rowSums} [2338] [2339] [2340] [2341] Underfull \hbox (badness 3547) in paragraph at lines 1880--1883 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2342] [2343] [2344] [2345] Underfull \hbox (badness 1983) in paragraph at lines 2287--2295 []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unpackedMatrix[][][][]\T1/ptm/m/n/10 . Al-ter-na-tively into the (cur-rently) three sub-classes [][][]\T1/zi4/m/it/ 10 ddenseMatrix[][][][]\T1/ptm/m/n/10 , [2346] [2347] [2348] [2349] Underfull \hbox (badness 2717) in paragraph at lines 2613--2617 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2350] [2351] Underfull \hbox (badness 3417) in paragraph at lines 2728--2730 []\T1/zi4/m/it/10 .sparseDiagonal() []\T1/ptm/m/n/10 ex-ists pri-mar-ily to lev er-age ef-fi-cient C-level meth-ods avail-able for [2352] Underfull \hbox (badness 8019) in paragraph at lines 2853--2855 []\T1/zi4/m/it/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/it/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 2856--2860 []\T1/zi4/m/it/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2353] [2354] [2355] [2356] Underfull \hbox (badness 1902) in paragraph at lines 3181--3183 [][][]\T1/zi4/m/it/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/it/10 zapsmall(x, [2357] Underfull \hbox (badness 2020) in paragraph at lines 3215--3218 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/it/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2358] [2359] Underfull \hbox (badness 4378) in paragraph at lines 3415--3424 []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 chol[][][]() []\T1/ptm/m/n/10 is typ- i-cally used, e.g., see []\T1/zi4/m/it/10 selectMethod("coerce", c(from="dsyMat rix", [2360] Underfull \hbox (badness 1354) in paragraph at lines 3483--3486 []\T1/ptm/m/n/10 a Ma-trix like []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 but with n o ex-plicit ze-ros, i.e., []\T1/zi4/m/it/10 !any(x@x == 0)[]\T1/ptm/m/n/10 , al -ways in-her-it-ing from [2361] [2362] [2363] [2364] [2365] Underfull \hbox (badness 4518) in paragraph at lines 3835--3838 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = Underfull \hbox (badness 3690) in paragraph at lines 3838--3841 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = [2366] Underfull \hbox (badness 2318) in paragraph at lines 3940--3944 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/it/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/it/10 "dMatrix"[]\T1/ptm/m/n/10 , [2367] [2368] Underfull \hbox (badness 3240) in paragraph at lines 4055--4059 []\T1/zi4/m/it/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/it/10 determinant[][][](x) [2369] [2370] [2371] [2372] [2373] [2374] Overfull \hbox (23.27168pt too wide) in paragraph at lines 4481--4481 []\T1/zi4/m/n/9 str(jgl009 <- ## https://math.nist.gov/MatrixMarket/data/Harwe ll-Boeing/counterx/counterx.html[] Overfull \hbox (8.27782pt too wide) in paragraph at lines 4488--4488 [] \T1/zi4/m/n/9 readHB(gzcon(url("https://www.cise.ufl.edu/research/sparse/RB /Boeing/msc00726.tar.gz"))))[] [2375] [2376] Underfull \hbox (badness 1087) in paragraph at lines 4663--4669 []\T1/ptm/m/n/10 a string whose first three char-ac-ters spec-ify the class of the re-sult. It [2377] Underfull \hbox (badness 3590) in paragraph at lines 4683--4688 []\T1/ptm/m/n/10 a string ([]\T1/zi4/m/it/10 "C"[]\T1/ptm/m/n/10 , []\T1/zi4/m/ it/10 "R"[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 "T"[]\T1/ptm/m/n/10 ) spec-i-f y-ing the stor-age of the re-sult as Underfull \hbox (badness 4660) in paragraph at lines 4701--4703 []\T1/ptm/m/n/10 a string, one of []\T1/zi4/m/it/10 "trace", "sumLog", "prod", "min", "max", "range", Underfull \hbox (badness 1609) in paragraph at lines 4748--4752 []\T1/zi4/m/it/10 .CR2T []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 .T2CR []\T1/ptm/ m/n/10 co-erce be-tween [][][]\T1/zi4/m/it/10 TsparseMatrix[][][] []\T1/ptm/m/n /10 and the union of [][][]\T1/zi4/m/it/10 CsparseMatrix[][][] []\T1/ptm/m/n/10 and [2378] [2379] [2380] Underfull \hbox (badness 1931) in paragraph at lines 4944--4946 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/it/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2381] [2382] [2383] [2384] Underfull \hbox (badness 1005) in paragraph at lines 5247--5252 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/it/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 5247--5252 \T1/ptm/m/n/10 When []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/it/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is [2385] Underfull \hbox (badness 5862) in paragraph at lines 5266--5269 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/it/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2386] Overfull \hbox (42.75635pt too wide) in paragraph at lines 5315--5315 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2387] Underfull \hbox (badness 3229) in paragraph at lines 5420--5429 []\T1/ptm/m/n/10 While ``row-indexing'' (of more than one row \T1/ptm/m/it/10 o r \T1/ptm/m/n/10 us-ing []\T1/zi4/m/it/10 drop=FALSE[]\T1/ptm/m/n/10 ) stays wi thin the Underfull \hbox (badness 10000) in paragraph at lines 5462--5464 []\T1/zi4/m/it/10 signature(x = "matrix", y = "indMatrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 3989) in paragraph at lines 5467--5470 []\T1/zi4/m/it/10 signature(from = "numeric", to = "indMatrix")[]\T1/ptm/m/n/10 : a user con-ve-nience, to al-low [2388] Underfull \hbox (badness 10000) in paragraph at lines 5477--5480 []\T1/zi4/m/it/10 signature(from = "indMatrix", to = "matrix")[]\T1/ptm/m/n/10 : co-er-cion to a tra-di-tional [2389] [2390] [2391] [2392] Overfull \hbox (26.39984pt too wide) in paragraph at lines 5872--5872 []\T1/zi4/m/it/10 isSymmetric(object, tol = 100 * .Machine$double.eps, tol1 = 8 * tol, checkDN = TRUE, ...)[] [2393] [2394] [2395] [2396] Underfull \vbox (badness 10000) has occurred while \output is active [2397] [2398] [2399] [2400] Underfull \hbox (badness 2478) in paragraph at lines 6478--6483 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 6486--6489 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2401] [2402] [2403] Underfull \hbox (badness 10000) in paragraph at lines 6720--6723 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2404] Underfull \hbox (badness 10000) in paragraph at lines 6781--6784 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2405] Underfull \hbox (badness 2050) in paragraph at lines 6880--6883 []\T1/zi4/m/it/10 lu() []\T1/ptm/m/n/10 is a generic func-tion with spe-cial me th-ods for dif-fer-ent types of ma-tri-ces. Use [2406] [2407] [2408] [2409] [2410] [2411] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.7305 \aliasA{det}{Matrix-class}{det} Underfull \hbox (badness 1527) in paragraph at lines 7396--7398 []\T1/zi4/m/it/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/it/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode Underfull \hbox (badness 4846) in paragraph at lines 7401--7404 []\T1/zi4/m/it/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 7406--7409 [2412] pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rpcent.* .Rpcent.}) has been already used, duplicate ignored \relax l.7478 ...*\%}{matrix-products}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.crossprod }) has been already used, duplicate ignored \relax l.7575 ...A{crossprod}{matrix-products}{crossprod} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.tcrosspro d}) has been already used, duplicate ignored \relax l.7676 ...tcrossprod}{matrix-products}{tcrossprod} [2413] [2414] Underfull \hbox (badness 10000) in paragraph at lines 7853--7858 []\T1/zi4/m/it/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 7853--7858 []\T1/zi4/m/it/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 7862--7864 []\T1/zi4/m/it/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 7864--7866 []\T1/zi4/m/it/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2415] [2416] Underfull \hbox (badness 1430) in paragraph at lines 8015--8020 []\T1/ptm/m/n/10 classes in-her-it-ing from []\T1/zi4/m/it/10 "MatrixFactorizat ion"[]\T1/ptm/m/n/10 , such as [][][]\T1/zi4/m/it/10 LU[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Cholesky[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 C HMfactor[][][][]\T1/ptm/m/n/10 , and [2417] [2418] Underfull \hbox (badness 10000) in paragraph at lines 8131--8133 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/it/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/it/10 X <- [2419] [2420] Underfull \vbox (badness 10000) has occurred while \output is active [2421] Underfull \hbox (badness 2478) in paragraph at lines 8329--8334 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 8337--8340 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2422] [2423] Underfull \hbox (badness 5924) in paragraph at lines 8517--8519 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2424] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.norm}) ha s been already used, duplicate ignored \relax l.8557 \HeaderA{norm}{Matrix Norms}{norm} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.norm.1}) has been already used, duplicate ignored \relax l.8557 \HeaderA{norm}{Matrix Norms}{norm} [2425] [2426] [2427] Underfull \hbox (badness 10000) in paragraph at lines 8859--8862 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2428] Underfull \hbox (badness 10000) in paragraph at lines 8923--8926 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2429] [2430] Underfull \hbox (badness 4242) in paragraph at lines 9058--9061 [][][]\T1/zi4/m/it/10 pack[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unp ack[][][][]\T1/ptm/m/n/10 ; its vir-tual "com-ple-ment" []\T1/zi4/m/it/10 "[][] unpackedMatrix[][][]"[]\T1/ptm/m/n/10 ; its proper sub-classes [2431] [2432] Underfull \hbox (badness 10000) in paragraph at lines 9137--9139 []\T1/zi4/m/it/10 signature(x = "matrix", y = "pMatrix") []\T1/ptm/m/n/10 and o ther sig-na-tures (use [2433] [2434] [2435] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.9364 \aliasA{qr}{qr-methods}{qr} [2436] [2437] Underfull \hbox (badness 7186) in paragraph at lines 9531--9537 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/it/10 qr[][][](x, tol, [2438] [2439] [2440] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rcond}) h as been already used, duplicate ignored \relax l.9688 ... the Reciprocal Condition Number}{rcond} [2441] [2442] [2443] [2444] Underfull \hbox (badness 2351) in paragraph at lines 9997--10005 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 9997--10005 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/it/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/it/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/it/10 NULL[]\T1/ptm/m/n/10 --- [2445] [2446] [2447] [2448] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solve}) h as been already used, duplicate ignored \relax l.10265 \aliasA{solve}{solve-methods}{solve} [2449] [2450] Underfull \hbox (badness 4403) in paragraph at lines 10501--10504 []\T1/ptm/m/n/10 , and sim-i-lar []\T1/zi4/m/it/10 b[]\T1/ptm/m/n/10 , in-clud- ing []\T1/zi4/m/it/10 "missing"[]\T1/ptm/m/n/10 , and [2451] Underfull \hbox (badness 10000) in paragraph at lines 10572--10575 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame Underfull \hbox (badness 10000) in paragraph at lines 10608--10611 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 10619--10623 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2452] [2453] [2454] [2455] [2456] [2457] [2458] Underfull \vbox (badness 10000) has occurred while \output is active [2459] Underfull \hbox (badness 10000) in paragraph at lines 11191--11199 []\T1/zi4/m/it/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 11191--11199 []\T1/zi4/m/it/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/it/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/it/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 11216--11224 []\T1/zi4/m/it/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 11216--11224 []\T1/zi4/m/it/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2460] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr.Q}) ha s been already used, duplicate ignored \relax l.11282 \aliasA{qr.Q}{sparseQR-class}{qr.Q} [2461] [2462] Underfull \hbox (badness 5036) in paragraph at lines 11467--11469 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2463] [2464] Underfull \hbox (badness 2828) in paragraph at lines 11629--11632 []\T1/zi4/m/it/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 11651--11654 []\T1/zi4/m/it/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/it/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/it/10 (x, times, [2465] Underfull \vbox (badness 10000) has occurred while \output is active [2466] [2467] [2468] [2469] Underfull \hbox (badness 2057) in paragraph at lines 11999--12001 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., [2470] [2471] Underfull \hbox (badness 10000) in paragraph at lines 12174--12179 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 12180--12186 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/it/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 crossprod []\T1/ptm/m /n/10 are de-fined [2472] Underfull \hbox (badness 1902) in paragraph at lines 12215--12219 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 sparseMat rix[][][] []\T1/ptm/m/n/10 con-struc-tors for []\T1/zi4/m/it/10 "dgTMatrix" []\ T1/ptm/m/n/10 (and other [2473] [2474] [2475] [2476] [2477] [2478] [2479] [2480] Underfull \hbox (badness 6910) in paragraph at lines 12940--12942 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2481] Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12987. Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12987. [2482] [2483] [2484]) (./boot-pkg.tex Chapter 18. [2485] [2486] [2487] [2488] [2489] [2490] [2491] [2492] [2493] [2494] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2495] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2496] Underfull \vbox (badness 10000) has occurred while \output is active [2497] [2498] [2499] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2500] [2501] [2502] [2503] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2504] [2505] [2506] [2507] [2508] [2509] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/it/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2510] [2511] Underfull \vbox (badness 10000) has occurred while \output is active [2512] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2513] [2514] [2515] [2516] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2517] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2518] [2519] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /it/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/it/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/it/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/it/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/it/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2520] [2521] [2522] [2523] [2524] [2525] [2526] [2527] [2528] [2529] [2530] [2531] [2532] [2533] [2534] [2535] [2536] [2537] [2538] [2539] [2540] [2541] [2542] [2543] [2544] [2545] [2546] [2547] [2548] [2549] [2550] [2551] [2552] [2553] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2554] [2555] [2556] [2557] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2558] [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/it/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2569] [2570] [2571] [2572] [2573] [2574] [2575] [2576] [2577] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2578] [2579] [2580] [2581] [2582] [2583] [2584] [2585] [2586] [2587]) (./class-pkg.tex [2588] Chapter 19. [2589] [2590] [2591] [2592] [2593] [2594] [2595] [2596] [2597] [2598] [2599] [2600] [2601] [2602] [2603] [2604]) (./cluster-pkg.tex Chapter 20. [2605] [2606] [2607] [2608] [2609] [2610] [2611] [2612] [2613] [2614] Underfull \hbox (badness 4144) in paragraph at lines 691--694 []\T1/ptm/m/n/10 Setting this to []\T1/zi4/m/it/10 FALSE []\T1/ptm/m/n/10 saves mem-ory (and hence time), but dis-ables [2615] [2616] Underfull \hbox (badness 1412) in paragraph at lines 783--788 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/it/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/it/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2617] Underfull \hbox (badness 10000) in paragraph at lines 881--883 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2618] [2619] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2620] [2621] [2622] [2623] [2624] [2625] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 [2626] [2627] Underfull \hbox (badness 2503) in paragraph at lines 1589--1592 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/it/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2628] Underfull \hbox (badness 4954) in paragraph at lines 1686--1688 []\T1/ptm/b/n/10 A\T1/ptm/m/n/10 symmetric bi-nary vari-able, aka []\T1/zi4/m/i t/10 "A" []\T1/ptm/m/n/10 in re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2629] Underfull \hbox (badness 7667) in paragraph at lines 1699--1703 []\T1/ptm/b/n/10 I\T1/ptm/m/n/10 nterval scaled -- the \T1/ptm/b/n/10 de-fault \T1/ptm/m/n/10 for all nu-meric Underfull \hbox (badness 10000) in paragraph at lines 1699--1703 \T1/ptm/m/n/10 (incl []\T1/zi4/m/it/10 integer[]\T1/ptm/m/n/10 ) columns of []\ T1/zi4/m/it/10 x[]\T1/ptm/m/n/10 , aka []\T1/zi4/m/it/10 "I" []\T1/ptm/m/n/10 i n re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2630] [2631] [2632] [2633] [2634] [2635] Underfull \hbox (badness 10000) in paragraph at lines 2207--2210 [2636] Underfull \hbox (badness 10000) in paragraph at lines 2221--2227 [][][]\T1/zi4/m/it/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/it/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/i t/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2637] [2638] [2639] Underfull \hbox (badness 6675) in paragraph at lines 2456--2458 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2640] [2641] [2642] [2643] [2644] [2645] [2646] [2647] Underfull \hbox (badness 2980) in paragraph at lines 3051--3055 [][][]\T1/zi4/m/it/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [2648] [2649] [2650] [2651] [2652] [2653] Underfull \hbox (badness 1142) in paragraph at lines 3392--3395 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2654] [2655] Underfull \hbox (badness 1142) in paragraph at lines 3511--3514 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2656] [2657] [2658] Underfull \hbox (badness 2582) in paragraph at lines 3734--3739 [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 clara[][][][]\T1/ptm/m/n/10 , [2659] Underfull \hbox (badness 2698) in paragraph at lines 3796--3801 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/it/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3796--3801 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/it/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/it/10 x x <- [2660] [2661] [2662] [2663] [2664] Underfull \hbox (badness 10000) in paragraph at lines 4088--4090 []\T1/ptm/m/n/10 a []\T1/zi4/m/it/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/it/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2665] [2666] [2667] [2668] Underfull \hbox (badness 2626) in paragraph at lines 4317--4322 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/it/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/it/10 col = [2669] Underfull \hbox (badness 1383) in paragraph at lines 4395--4400 []\T1/ptm/m/n/10 While []\T1/zi4/m/it/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/it/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2670] [2671] [2672] [2673] [2674] [2675] [2676] Underfull \hbox (badness 10000) in paragraph at lines 4839--4841 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/it/10 xclara.dat\T1/ptm/m/n/10 ' in side [2677] [2678]) (./codetools-pkg.tex Chapter 21. [2679] [2680] [2681] [2682] [2683]) (./foreign-pkg.tex [2684] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2685] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2686] [2687] [2688] [2689] [2690] [2691] [2692] Underfull \hbox (badness 2846) in paragraph at lines 505--514 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 505--514 \T1/ptm/m/n/10 els. For []\T1/zi4/m/it/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 505--514 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/it/10 paste0(label, [2693] Overfull \hbox (6.73795pt too wide) in paragraph at lines 623--623 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2694] [2695] [2696] Underfull \hbox (badness 10000) in paragraph at lines 811--812 [2697] Underfull \hbox (badness 10000) in paragraph at lines 868--872 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 868--872 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 868--872 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 868--872 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2698] [2699] Underfull \hbox (badness 10000) in paragraph at lines 989--991 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2700] [2701] [2702] [2703] Underfull \hbox (badness 10000) in paragraph at lines 1268--1274 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/it/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2704] [2705]) (./lattice-pkg.tex [2706] Chapter 23. [2707] Underfull \hbox (badness 1484) in paragraph at lines 117--121 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 117--121 \T1/zi4/m/it/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2708] [2709] [2710] [2711] [2712] [2713] [2714] [2715] [2716] [2717] [2718] [2719] [2720] [2721] [2722] Underfull \hbox (badness 1062) in paragraph at lines 1402--1406 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2723] [2724] [2725] Underfull \hbox (badness 1803) in paragraph at lines 1570--1587 [][][]\T1/zi4/m/it/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/it/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1570--1587 [][][]\T1/zi4/m/it/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/it/10 strip.default[][][][]\T1/ptm/m/n/10 , [2726] [2727] Underfull \hbox (badness 3009) in paragraph at lines 1712--1714 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/it/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1742--1746 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2728] [2729] [2730] [2731] [2732] Underfull \hbox (badness 10000) in paragraph at lines 2128--2131 []\T1/ptm/m/n/10 When []\T1/zi4/m/it/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2733] [2734] [2735] [2736] [2737] [2738] [2739] [2740] [2741] [2742] Underfull \hbox (badness 2781) in paragraph at lines 2836--2838 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/it/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2743] [2744] Underfull \hbox (badness 2486) in paragraph at lines 2988--2992 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2745] [2746] [2747] [2748] [2749] [2750] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.parallel} ) has been already used, duplicate ignored \relax l.3462 \aliasA{parallel}{B\_08\_splom}{parallel} [2751] [2752] [2753] [2754] [2755] [2756] [2757] Underfull \hbox (badness 5696) in paragraph at lines 3949--3953 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3949--3953 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/it/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3949--3953 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2758] [2759] [2760] [2761] Underfull \hbox (badness 1173) in paragraph at lines 4208--4212 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in Underfull \hbox (badness 3219) in paragraph at lines 4235--4237 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2762] [2763] [2764] Underfull \hbox (badness 3492) in paragraph at lines 4435--4445 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/it/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/it/10 "plot.symbol"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4460--4463 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4463--4465 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 and [2765] [2766] [2767] [2768] [2769] [2770] [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] [2773] [2774] Underfull \hbox (badness 6157) in paragraph at lines 5201--5204 []\T1/zi4/m/it/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/it/10 print.shingle []\T1/ptm/m/n/10 and [2775] [2776] [2777] [2778] [2779] [2780] [2781] Underfull \hbox (badness 10000) in paragraph at lines 5659--5662 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5659--5662 []\T1/zi4/m/it/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2782] [2783] [2784] [2785] Underfull \hbox (badness 4805) in paragraph at lines 6021--6025 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 6032--6039 []\T1/ptm/m/n/10 For []\T1/zi4/m/it/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 6032--6039 []\T1/zi4/m/it/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/it/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 6032--6039 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/it/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 6032--6039 []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 6032--6039 [][][]\T1/zi4/m/it/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2786] [2787] [2788] Underfull \vbox (badness 10000) has occurred while \output is active [2789] Underfull \hbox (badness 4242) in paragraph at lines 6332--6337 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6332--6337 \T1/ptm/m/n/10 ter []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2790] [2791] Underfull \hbox (badness 2310) in paragraph at lines 6448--6453 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/it/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/it/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2792] [2793] [2794] [2795] [2796] [2797] [2798] [2799] [2800] [2801] [2802] [2803] Underfull \hbox (badness 3168) in paragraph at lines 7309--7313 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2804] [2805] [2806] [2807] Underfull \hbox (badness 2012) in paragraph at lines 7580--7583 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2808] [2809] [2810] Underfull \hbox (badness 3333) in paragraph at lines 7787--7789 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/it/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 plot.line []\T1/ptm/m/n/10 us-ing Underfull \hbox (badness 2318) in paragraph at lines 7815--7823 []\T1/zi4/m/it/10 "spline" []\T1/ptm/m/n/10 adds a cu-bic smooth-ing spline fit (same as [][][]\T1/zi4/m/it/10 panel.spline[][][][]\T1/ptm/m/n/10 ). [2811] [2812] [2813] Underfull \vbox (badness 10000) has occurred while \output is active [2814] [2815] [2816] Underfull \hbox (badness 1436) in paragraph at lines 8225--8231 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2817] [2818] [2819] [2820] [2821] [2822] [2823] [2824] Underfull \hbox (badness 10000) in paragraph at lines 8794--8797 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/it/10 panel.supe rpose []\T1/ptm/m/n/10 from [2825] Underfull \hbox (badness 1092) in paragraph at lines 8840--8842 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/it/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/it/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2826] [2827] Underfull \hbox (badness 3895) in paragraph at lines 9001--9004 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/it/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in [2828] Underfull \hbox (badness 1515) in paragraph at lines 9077--9081 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2829] [2830] Underfull \hbox (badness 6316) in paragraph at lines 9183--9188 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in Underfull \hbox (badness 5908) in paragraph at lines 9200--9203 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/it/10 xscale .components.default []\T1/ptm/m/n/10 and [2831] [2832] [2833] [2834] Underfull \hbox (badness 2418) in paragraph at lines 9491--9495 []\T1/ptm/m/n/10 returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/it/10 left, right, left.name, right.name, [2835] [2836] [2837] [2838] [2839] [2840] [2841] Underfull \hbox (badness 2310) in paragraph at lines 9955--9959 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/it/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/it/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 9960--9963 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/it/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/it/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Morris"[]\T1/ptm/m/n/10 , [2842] [2843] [2844] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma} ) has been already used, duplicate ignored \relax l.10186 \aliasA{melanoma}{H\_melanoma}{melanoma} [2845] [2846] [2847] Underfull \hbox (badness 4144) in paragraph at lines 10410--10413 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10410--10413 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/it /10 https : / / ruralhealth . und . edu / projects / [2848] [2849]) (./mgcv-pkg.tex [2850] Chapter 24. [2851] [2852] [2853] Underfull \hbox (badness 1142) in paragraph at lines 184--188 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 209--214 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2854] [2855] [2856] [2857] Underfull \hbox (badness 10000) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/it/10 gam.side[][][][]\T1/ptm/m/n/10 , [2858] [2859] [2860] [2861] [2862] [2863] Underfull \hbox (badness 1406) in paragraph at lines 704--705 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2864] [2865] Underfull \hbox (badness 1158) in paragraph at lines 814--816 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion [2866] Underfull \hbox (badness 1259) in paragraph at lines 877--878 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2867] Underfull \vbox (badness 10000) has occurred while \output is active [2868] [2869] [2870] [2871] [2872] [2873] Underfull \hbox (badness 1281) in paragraph at lines 1272--1273 []\T1/zi4/m/it/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/it/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/it/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2874] [2875] Underfull \vbox (badness 10000) has occurred while \output is active [2876] Underfull \vbox (badness 10000) has occurred while \output is active [2877] [2878] Underfull \vbox (badness 10000) has occurred while \output is active [2879] [2880] [2881] [2882] [2883] [2884] [2885] [2886] [2887] [2888] [2889] [2890] [2891] [2892] [2893] [2894] [2895] [2896] Underfull \hbox (badness 1142) in paragraph at lines 2594--2598 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2897] Underfull \hbox (badness 1043) in paragraph at lines 2620--2626 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2898] [2899] [2900] [2901] [2902] [2903] Underfull \vbox (badness 10000) has occurred while \output is active [2904] Underfull \vbox (badness 10000) has occurred while \output is active [2905] [2906] [2907] [2908] [2909] [2910] [2911] [2912] [2913] [2914] [2915] [2916] [2917] [2918] [2919] [2920] [2921] Underfull \hbox (badness 10000) in paragraph at lines 4065--4069 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/it/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/it/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2922] [2923] Underfull \vbox (badness 10000) has occurred while \output is active [2924] [2925] [2926] Underfull \hbox (badness 1184) in paragraph at lines 4352--4356 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2927] [2928] [2929] [2930] [2931] [2932] [2933] [2934] [2935] [2936] [2937] [2938] Underfull \hbox (badness 1142) in paragraph at lines 5075--5079 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2939] Underfull \hbox (badness 1231) in paragraph at lines 5179--5181 []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 wit h [2940] [2941] [2942] Underfull \vbox (badness 10000) has occurred while \output is active [2943] [2944] [2945] [2946] Underfull \hbox (badness 2181) in paragraph at lines 5621--5622 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2947] [2948] [2949] [2950] [2951] [2952] [2953] Underfull \hbox (badness 10000) in paragraph at lines 6009--6010 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/it/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2954] [2955] [2956] [2957] [2958] [2959] [2960] [2961] [2962] [2963] [2964] Underfull \hbox (badness 1142) in paragraph at lines 6594--6598 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2965] [2966] [2967] Underfull \vbox (badness 10000) has occurred while \output is active [2968] [2969] [2970] [2971] Underfull \hbox (badness 1087) in paragraph at lines 6966--6967 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/it/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [2972] [2973] Underfull \vbox (badness 10000) has occurred while \output is active [2974] Underfull \vbox (badness 10000) has occurred while \output is active [2975] [2976] [2977] [2978] [2979] [2980] [2981] [2982] [2983] [2984] [2985] [2986] [2987] Underfull \hbox (badness 1242) in paragraph at lines 7915--7916 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [2988] [2989] [2990] [2991] [2992] [2993] [2994] [2995] [2996] [2997] [2998] Underfull \hbox (badness 6001) in paragraph at lines 8560--8562 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/it/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [2999] [3000] [3001] [3002] [3003] [3004] [3005] [3006] [3007] [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] [3010] Underfull \hbox (badness 1038) in paragraph at lines 9309--9312 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/it/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/it/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9309--9312 []\T1/zi4/m/it/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [3011] Underfull \hbox (badness 10000) in paragraph at lines 9365--9368 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/it/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/it/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [3012] [3013] [3014] [3015] [3016] [3017] [3018] [3019] [3020] [3021] [3022] Underfull \hbox (badness 1852) in paragraph at lines 10039--10042 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [3023] [3024] [3025] Underfull \hbox (badness 1852) in paragraph at lines 10208--10211 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [3026] [3027] Underfull \vbox (badness 10000) has occurred while \output is active [3028] [3029] Underfull \hbox (badness 1205) in paragraph at lines 10448--10449 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10448--10449 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10454--10459 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3030] Underfull \hbox (badness 1205) in paragraph at lines 10538--10539 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10538--10539 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [3031] [3032] [3033] Underfull \hbox (badness 1253) in paragraph at lines 10737--10739 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [3034] [3035] [3036] [3037] [3038] [3039] Underfull \hbox (badness 4792) in paragraph at lines 10998--11001 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/i t/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/it/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 10998--11001 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [3040] Underfull \hbox (badness 10000) in paragraph at lines 11105--11108 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/it /10 "deviance"[]\T1/ptm/m/n/10 , [3041] [3042] [3043] [3044] [3045] [3046] [3047] [3048] [3049] [3050] [3051] [3052] [3053] [3054] Underfull \hbox (badness 3861) in paragraph at lines 11896--11899 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3055] [3056] Underfull \hbox (badness 1320) in paragraph at lines 12011--12016 \T1/ptm/m/n/10 and []\T1/zi4/m/it/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/it/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3057] Underfull \hbox (badness 1975) in paragraph at lines 12117--12122 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3058] [3059] Underfull \hbox (badness 1762) in paragraph at lines 12206--12218 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/it/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/it/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3060] [3061] [3062] Underfull \hbox (badness 7667) in paragraph at lines 12418--12424 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3063] Underfull \hbox (badness 10000) in paragraph at lines 12459--12460 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3064] [3065] [3066] [3067] Underfull \vbox (badness 10000) has occurred while \output is active [3068] Underfull \hbox (badness 10000) in paragraph at lines 12736--12738 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3069] [3070] Underfull \hbox (badness 10000) in paragraph at lines 12866--12867 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3071] [3072] [3073] Underfull \hbox (badness 1436) in paragraph at lines 13002--13009 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 only al-lows one [3074] [3075] Underfull \hbox (badness 10000) in paragraph at lines 13101--13102 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3076] [3077] [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] Underfull \hbox (badness 10000) in paragraph at lines 13702--13708 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13702--13708 []\T1/zi4/m/it/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 for-mula. Note [3086] [3087] [3088] Underfull \vbox (badness 10000) has occurred while \output is active [3089] Underfull \vbox (badness 10000) has occurred while \output is active [3090] [3091] Underfull \hbox (badness 10000) in paragraph at lines 14045--14046 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3092] [3093] [3094] [3095] Overfull \hbox (35.26862pt too wide) in paragraph at lines 14257--14257 []\T1/zi4/m/n/9 b <- gam(y ~ s(x)+s(f1,x,bs="sz")+s(f2,x,bs="sz")+s(f1,f2,x,bs ="sz",id=1),data=dat,method="REML")[] [3096] [3097] Underfull \hbox (badness 3895) in paragraph at lines 14403--14406 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3098] Underfull \hbox (badness 10000) in paragraph at lines 14448--14450 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3099] [3100] [3101] [3102] [3103] Underfull \hbox (badness 1371) in paragraph at lines 14728--14734 []\T1/zi4/m/it/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14739--14741 []\T1/zi4/m/it/10 bs="fs" []\T1/ptm/m/n/10 A spe-cial smoother class (see Underfull \hbox (badness 1132) in paragraph at lines 14739--14741 [][][]\T1/zi4/m/it/10 smooth.construct.fs.smooth.spec[][][][]\T1/ptm/m/n/10 ) i s avail-able for the case in which a smooth is [3104] Underfull \hbox (badness 10000) in paragraph at lines 14769--14773 [][][]\T1/zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 t2[][][] [][]tprs[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 Duchon.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 cubic.regression.spline[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 p.spl ine[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14769--14773 [][][]\T1/zi4/m/it/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Overfull \hbox (46.8009pt too wide) in paragraph at lines 14769--14773 [][][]\T1/zi4/m/it/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 ,[][ ][]\T1/zi4/m/it/10 factor.smooth.interaction[][][] [3105] [3106] [3107] [3108] Underfull \hbox (badness 2326) in paragraph at lines 14974--14981 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/it/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3109] Underfull \hbox (badness 2158) in paragraph at lines 15059--15059 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3110] [3111] [3112] [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] [3123] [3124] [3125] [3126] [3127] [3128] [3129] [3130] [3131] [3132] [3133] [3134] Overfull \hbox (21.42029pt too wide) in paragraph at lines 16621--16621 []\T1/zi4/m/it/10 vcov(object, sandwich=FALSE, freq = FALSE, dispersion = NULL ,unconditional=FALSE, ...)[] [3135] [3136] Underfull \hbox (badness 1796) in paragraph at lines 16734--16737 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/it/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/it/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3137] [3138] [3139] [3140] Underfull \vbox (badness 10000) has occurred while \output is active [3141] [3142] [3143] [3144] [3145] [3146]) (./nlme-pkg.tex Chapter 25. [3147] [3148] [3149] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] [3158] [3159] [3160] [3161] [3162] [3163] [3164] [3165] [3166] [3167] [3168] [3169] [3170] [3171] [3172] [3173] [3174] [3175] [3176] [3177] [3178] [3179] [3180] Underfull \hbox (badness 10000) in paragraph at lines 2254--2260 [][][]\T1/zi4/m/it/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3181] [3182] [3183] [3184] [3185] [3186] [3187] [3188] [3189] [3190] [3191] [3192] [3193] [3194] [3195 pdfTeX warning (ext4): destination with the same identifier (name{Rfn.corMatrix .corCompSymm}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.3189 ] [3196] [3197] [3198] [3199] [3200] [3201] [3202] [3203] [3204] [3205] [3206] [3207] [3208] [3209] [3210] [3211] [3212] [3213] Underfull \hbox (badness 1067) in paragraph at lines 4414--4419 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3214] [3215] [3216] [3217] [3218] [3219] [3220] [3221] [3222] [3223] [3224] [3225] Underfull \hbox (badness 10000) in paragraph at lines 5160--5164 [][][]\T1/zi4/m/it/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/it/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3226] [3227] [3228] [3229] [3230] [3231] [3232] Underfull \hbox (badness 10000) in paragraph at lines 5592--5595 [][][]\T1/zi4/m/it/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3233] [3234] [3235] [3236] [3237] [3238] [3239] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 [][][]\T1/zi4/m/it/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3240] [3241] [3242] [3243] Underfull \hbox (badness 1490) in paragraph at lines 6248--6259 [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/it/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3244] Underfull \hbox (badness 10000) in paragraph at lines 6312--6314 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3245] [3246] [3247] [3248] [3249] [3250] Underfull \hbox (badness 10000) in paragraph at lines 6724--6726 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3251] [3252] [3253] [3254] Underfull \hbox (badness 10000) in paragraph at lines 6995--7002 [][][]\T1/zi4/m/it/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3255] [3256] [3257] [3258] Underfull \hbox (badness 10000) in paragraph at lines 7255--7260 [][][]\T1/zi4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3259] [3260] [3261] [3262] [3263] [3264] [3265] [3266] [3267] [3268] [3269] [3270] [3271] [3272] [3273] [3274] [3275] [3276] [3277] Underfull \hbox (badness 10000) in paragraph at lines 8538--8540 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3278] [3279] [3280] [3281] [3282] Underfull \hbox (badness 10000) in paragraph at lines 8824--8831 [][][]\T1/zi4/m/it/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3283] [3284] [3285] [3286] [3287] [3288] [3289] [3290] Underfull \hbox (badness 10000) in paragraph at lines 9345--9352 [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3291] [3292] [3293] [3294] [3295] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9707 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix.1} ) has been already used, duplicate ignored \relax l.9707 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3296] [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] Underfull \hbox (badness 1596) in paragraph at lines 10484--10510 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3308] [3309] Underfull \hbox (badness 1490) in paragraph at lines 10600--10606 [][][]\T1/zi4/m/it/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 reStruct[][][][]\T1/ptm/m/n/10 , [3310] [3311] [3312] Underfull \hbox (badness 10000) in paragraph at lines 10841--10843 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3313] [3314] [3315] [3316] [3317] [3318] [3319] [3320] [3321] [3322] [3323] [3324] [3325] [3326] [3327] [3328] [3329] [3330] [3331] [3332] [3333] [3334] [3335] [3336] [3337] [3338] [3339] [3340] [3341] [3342] [3343] [3344] [3345] [3346] [3347] [3348] [3349] [3350] [3351] [3352] [3353] [3354] [3355] Underfull \hbox (badness 1286) in paragraph at lines 13744--13751 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ it/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/it/10 inner []\T1/ptm/m/n/1 0 or [3356] [3357] [3358] [3359] [3360] [3361] [3362] [3363] [3364] [3365] [3366] [3367] [3368] [3369] [3370] [3371] [3372] [3373] [3374] [3375] [3376] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects}) has been already used, duplicate ignored \relax l.15187 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects.1}) has been already used, duplicate ignored \relax l.15187 ...Extract Random Effects}{random.effects} [3377] [3378] [3379] [3380] [3381] [3382] [3383] [3384] [3385] [3386] Underfull \hbox (badness 3884) in paragraph at lines 15826--15830 []\T1/ptm/m/n/10 Charles F. Minto, Thomas W. Schnider and Steven L. Shafer (199 7). Phar-ma-coki- Underfull \hbox (badness 4846) in paragraph at lines 15826--15830 \T1/ptm/m/n/10 net-ics and Phar-ma-co-dy-nam-ics of Remifen-tanil: II. Model Ap -pli-ca-tion. \T1/ptm/m/it/10 Anes-the-si-ol- Underfull \hbox (badness 1953) in paragraph at lines 15826--15830 \T1/ptm/m/it/10 ogy \T1/ptm/b/n/10 86 \T1/ptm/m/n/10 1, 24--33. [][]$\T1/zi4/m/ it/10 https : / / pubs . asahq . org / anesthesiology / article / 86 / 1 / 24 / 35925 / [3387] [3388] Underfull \hbox (badness 1067) in paragraph at lines 15938--15943 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3389] [3390] [3391] [3392] Underfull \hbox (badness 1448) in paragraph at lines 16181--16190 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/it/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3393] [3394] [3395] [3396] [3397] [3398] [3399] [3400] [3401] [3402] Underfull \hbox (badness 1728) in paragraph at lines 16885--16888 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3403] [3404] [3405] [3406] [3407] Underfull \hbox (badness 8056) in paragraph at lines 17219--17228 \T1/zi4/m/it/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/it /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17219--17228 \T1/zi4/m/it/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17219--17228 \T1/zi4/m/it/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3408] [3409] [3410] [3411] [3412] Underfull \hbox (badness 10000) in paragraph at lines 17541--17549 [][][]\T1/zi4/m/it/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varPower[][][][]\T1/ptm/m/n/10 , [3413] [3414] [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] Underfull \hbox (badness 10000) in paragraph at lines 18251--18261 [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18251--18261 [][][]\T1/zi4/m/it/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3423] [3424] [3425] [3426] [3427] Underfull \hbox (badness 5036) in paragraph at lines 18575--18584 [][][]\T1/zi4/m/it/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3428] [3429] [3430] [3431] [3432] [3433] [3434] [3435] [3436] [3437] [3438] [3439] [3440]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom. 1}) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3441] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [3442] [3443] [3444] [3445] [3446] [3447] [3448]) (./rpart-pkg.tex Chapter 27. [3449] [3450] [3451] [3452] [3453] [3454] [3455] [3456] [3457] [3458] Underfull \hbox (badness 10000) in paragraph at lines 771--775 []\T1/ptm/m/n/10 Logical. If []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , adds to the la-bel Underfull \hbox (badness 1348) in paragraph at lines 771--775 \T1/zi4/m/it/10 #events level1/ #events level2/ \T1/ptm/m/n/10 etc. for method []\T1/zi4/m/it/10 class[]\T1/ptm/m/n/10 , \T1/zi4/m/it/10 n \T1/ptm/m/n/10 for [3459] [3460] [3461] [3462] [3463] [3464] [3465] [3466] [3467] [3468] [3469] [3470] [3471] [3472] [3473] [3474] [3475] [3476] [3477]) (./spatial-pkg.tex [3478] Chapter 28. [3479] [3480] [3481] [3482] [3483] [3484] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3485] [3486] [3487] [3488] [3489] [3490] [3491] [3492] [3493] [3494] [3495] [3496] [3497]) (./survival-pkg.tex [3498] Chapter 29. [3499] [3500] [3501] [3502] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3503] [3504] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml.1}) h as been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3505] [3506] [3507] [3508] [3509] [3510] [3511] [3512] [3513] [3514] [3515] Underfull \hbox (badness 1097) in paragraph at lines 1110--1112 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3516] [3517] [3518] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) h as been already used, duplicate ignored \relax l.1312 ...erapy for Stage B/C colon cancer}{colon} [3519] Underfull \hbox (badness 3679) in paragraph at lines 1360--1364 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/it/10 table(colon$nodes, [3520] [3521] [3522] [3523] [3524] [3525] [3526] [3527] [3528] Underfull \hbox (badness 3250) in paragraph at lines 2048--2063 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/it/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 2048--2063 []\T1/zi4/m/it/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3529] [3530] [3531] [3532] [3533] [3534] [3535] [3536] [3537] [3538] [3539] [3540] [3541] [3542] [3543] [3544] [3545] [3546] [3547] [3548] [3549] Underfull \hbox (badness 1389) in paragraph at lines 3500--3502 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3550] [3551] [3552] [3553] Overfull \hbox (467.89665pt too wide) in alignment at lines 3786--3786 [] [] [3554] [3555] [3556] [3557] [3558] [3559] [3560] [3561] [3562] [3563] [3564] [3565] [3566] [3567] [3568] [3569] [3570] [3571] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] Underfull \hbox (badness 5274) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3581] [3582] [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] [3591] [3592] [3593] [3594] [3595] [3596] [3597] Underfull \hbox (badness 1281) in paragraph at lines 6743--6746 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/it/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/it/10 "dfbeta"[]\T1/ptm/m/n/10 , [3598] [3599] [3600] [3601] [3602] [3603] [3604] [3605] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solder}) has been already used, duplicate ignored \relax l.7312 ...ata from a soldering experiment}{solder} [3606] [3607] [3608] [3609] [3610] [3611] [3612] [3613] [3614] [3615] [3616] [3617] [3618] [3619] [3620] [3621] [3622] [3623] [3624] [3625] [3626] [3627] [3628] Underfull \hbox (badness 1038) in paragraph at lines 8899--8905 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3629] [3630] [3631] [3632] [3633] Underfull \hbox (badness 10000) in paragraph at lines 9257--9262 [][][]\T1/zi4/m/it/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3634] [3635] [3636] [3637] [3638] [3639] [3640] [3641] [3642] [3643] [3644] [3645] Underfull \hbox (badness 1354) in paragraph at lines 10209--10213 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. 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cbind2,sparseMatrix,diagonalMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 7493--7495 []\T1/zi4/m/it/10 cbind2,sparseMatrix,sparseMatrix-method [3730] [3731] [3732] Overfull \hbox (10.8567pt too wide) in paragraph at lines 8260--8262 []\T1/zi4/m/it/10 coerce,atomicVector,dsparseVector-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8262--8264 []\T1/zi4/m/it/10 coerce,atomicVector,sparseVector-method [3733] Overfull \hbox (10.8567pt too wide) in paragraph at lines 8278--8280 []\T1/zi4/m/it/10 coerce,CHMfactor,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8282--8284 []\T1/zi4/m/it/10 coerce,CsparseMatrix,denseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8284--8286 []\T1/zi4/m/it/10 coerce,CsparseMatrix,generalMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8288--8290 []\T1/zi4/m/it/10 coerce,CsparseMatrix,packedMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8290--8292 []\T1/zi4/m/it/10 coerce,CsparseMatrix,RsparseMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8292--8294 []\T1/zi4/m/it/10 coerce,CsparseMatrix,sparseVector-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8294--8296 []\T1/zi4/m/it/10 coerce,CsparseMatrix,TsparseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 8296--8298 []\T1/zi4/m/it/10 coerce,CsparseMatrix,unpackedMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8300--8302 []\T1/zi4/m/it/10 coerce,denseMatrix,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8302--8304 []\T1/zi4/m/it/10 coerce,denseMatrix,ddenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8306--8308 []\T1/zi4/m/it/10 coerce,denseMatrix,dsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8308--8310 []\T1/zi4/m/it/10 coerce,denseMatrix,generalMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8310--8312 []\T1/zi4/m/it/10 coerce,denseMatrix,ldenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8314--8316 []\T1/zi4/m/it/10 coerce,denseMatrix,lsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8318--8320 []\T1/zi4/m/it/10 coerce,denseMatrix,ndenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8322--8324 []\T1/zi4/m/it/10 coerce,denseMatrix,nsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8324--8326 []\T1/zi4/m/it/10 coerce,denseMatrix,packedMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8326--8328 []\T1/zi4/m/it/10 coerce,denseMatrix,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8328--8330 []\T1/zi4/m/it/10 coerce,denseMatrix,sparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8330--8332 []\T1/zi4/m/it/10 coerce,denseMatrix,TsparseMatrix-method Overfull 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coerce,diagonalMatrix,lsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8366--8368 []\T1/zi4/m/it/10 coerce,diagonalMatrix,ndenseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 8370--8372 []\T1/zi4/m/it/10 coerce,diagonalMatrix,nsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8372--8374 []\T1/zi4/m/it/10 coerce,diagonalMatrix,packedMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 8374--8376 []\T1/zi4/m/it/10 coerce,diagonalMatrix,RsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8376--8378 []\T1/zi4/m/it/10 coerce,diagonalMatrix,sparseVector-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 8378--8380 []\T1/zi4/m/it/10 coerce,diagonalMatrix,symmetricMatrix-method [3734] Overfull \hbox (35.8567pt too wide) in paragraph at lines 8380--8382 []\T1/zi4/m/it/10 coerce,diagonalMatrix,triangularMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 8382--8384 []\T1/zi4/m/it/10 coerce,diagonalMatrix,TsparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 8384--8386 []\T1/zi4/m/it/10 coerce,diagonalMatrix,unpackedMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8400--8402 []\T1/zi4/m/it/10 coerce,dsparseMatrix,lsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8404--8406 []\T1/zi4/m/it/10 coerce,dsparseMatrix,nsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8456--8458 []\T1/zi4/m/it/10 coerce,indMatrix,diagonalMatrix-method [3735] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8486--8488 []\T1/zi4/m/it/10 coerce,indMatrix,unpackedMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8506--8508 []\T1/zi4/m/it/10 coerce,lsparseMatrix,dsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8510--8512 []\T1/zi4/m/it/10 coerce,lsparseMatrix,nsparseMatrix-method [3736] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8608--8610 []\T1/zi4/m/it/10 coerce,matrix.coo,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8616--8618 []\T1/zi4/m/it/10 coerce,matrix.coo,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8620--8622 []\T1/zi4/m/it/10 coerce,matrix.coo,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8622--8624 []\T1/zi4/m/it/10 coerce,matrix.csc,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8628--8630 []\T1/zi4/m/it/10 coerce,matrix.csc,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8632--8634 []\T1/zi4/m/it/10 coerce,matrix.csc,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8634--8636 []\T1/zi4/m/it/10 coerce,matrix.csr,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8642--8644 []\T1/zi4/m/it/10 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10137--10139 []\T1/zi4/m/it/10 determinant,diagonalMatrix,logical-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 10157--10159 []\T1/zi4/m/it/10 determinant,MatrixFactorization,missing-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10161--10163 []\T1/zi4/m/it/10 determinant,triangularMatrix,logical-method [3746] [3747] [3748] Overfull \hbox (15.01662pt too wide) in paragraph at lines 10861--10863 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ds.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3749] [3750] [3751] [3752] Overfull \hbox (35.8567pt too wide) in paragraph at lines 11752--11754 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,character-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 11754--11756 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,missing-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 11756--11758 []\T1/zi4/m/it/10 forceSymmetric,diagonalMatrix,character-method Overfull \hbox (30.8567pt too wide) 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[3] [4] Underfull \hbox (badness 6252) in paragraph at lines 143--151 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 143--151 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 143--151 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [5] [6] [7] Underfull \hbox (badness 1178) in paragraph at lines 333--336 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [8] [9] [10] Underfull \hbox (badness 2556) in paragraph at lines 571--577 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [11] [12] [13] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] (/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [24] [25] [26] Underfull \hbox (badness 10000) in paragraph at lines 1611--1617 [27] [28] [29] [30] [31] Underfull \hbox (badness 1242) in paragraph at lines 2023--2026 []\T1/ptm/m/n/10 Since \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.3.0, the \T1/ptm/m/it/ 10 de-fault \T1/ptm/m/n/10 method will call []\T1/zi4/m/n/10 as.data.frame.vect or() []\T1/ptm/m/n/10 for atomic (as by Underfull \hbox (badness 10000) in paragraph at lines 2027--2031 []\T1/ptm/m/n/10 Direct calls to []\T1/zi4/m/n/10 as.data.frame.() []\T1 /ptm/m/n/10 are still pos-si-ble (base pack-age!), for Underfull \hbox (badness 5490) in paragraph at lines 2027--2031 \T1/ptm/m/n/10 12 atomic base classes, but will dep-re-cated (al-ready vis-i-bl y by set-ting en-vi-ron-ment Underfull \hbox (badness 10000) in paragraph at lines 2027--2031 \T1/ptm/m/n/10 vari-able []\T1/zi4/m/n/10 _R_CHECK_AS_DATA_FRAME_EXPLICIT_METHO D_ []\T1/ptm/m/n/10 to non-empty) where call-ing [32] [33] [34] [35] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2267--2267 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [36] [37] [38] [39] [40] [41] [42] [43] [44] Underfull \hbox (badness 1721) in paragraph at lines 2933--2937 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [45] [46] [47] [48] [49] [50] [51] Underfull \hbox (badness 2538) in paragraph at lines 3413--3416 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] [62] Underfull \hbox (badness 10000) in paragraph at lines 4209--4211 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Underfull \hbox (badness 2521) in paragraph at lines 5505--5507 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [82] [83] [84] [85] [86] [87] [88] [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6770--6770 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [100] [101] [102] [103] [104] [105] [106] [107] [108] [109] [110] [111] Underfull \hbox (badness 1303) in paragraph at lines 7663--7670 []\T1/zi4/m/n/10 file []\T1/ptm/m/n/10 can be used with []\T1/zi4/m/n/10 descri ption = "clipboard" []\T1/ptm/m/n/10 in mode []\T1/zi4/m/n/10 "r" []\T1/ptm/m/n /10 only. This reads the Underfull \hbox (badness 2261) in paragraph at lines 7674--7679 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [112] [113] Underfull \vbox (badness 10000) has occurred while \output is active [114] [115] [116] [117] [118] [119] [120] [121] Underfull \hbox (badness 2096) in paragraph at lines 8353--8357 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [122] [123] Underfull \hbox (badness 2351) in paragraph at lines 8468--8471 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [124] [125] [126] [127] [128] Underfull \hbox (badness 4479) in paragraph at lines 8785--8796 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [129] [130] [131] [132] [133] Underfull \hbox (badness 1629) in paragraph at lines 9215--9227 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9215--9227 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1178) in paragraph at lines 10063--10067 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] Underfull \hbox (badness 2744) in paragraph at lines 12397--12399 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [179] [180] [181] [182] [183] [184] [185] Underfull \vbox (badness 10000) has occurred while \output is active [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] Underfull \hbox (badness 2253) in paragraph at lines 14601--14603 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see Underfull \hbox (badness 1490) in paragraph at lines 14636--14639 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [209] Underfull \hbox (badness 1565) in paragraph at lines 14718--14722 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [210] Underfull \hbox (badness 4927) in paragraph at lines 14769--14771 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [211] [212] Underfull \hbox (badness 3148) in paragraph at lines 14871--14876 [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.fi les[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 help[][][][]\T1/ptm/m/n/10 ; [ ][][]\T1/zi4/m/n/10 RShowDoc[][][] []\T1/ptm/m/n/10 call []\T1/zi4/m/n/10 file. show() []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 type = "text"[]\T1/ptm/m/n/10 . Co n-sider Underfull \hbox (badness 1466) in paragraph at lines 14918--14921 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [213] Underfull \vbox (badness 1418) has occurred while \output is active [214] Underfull \hbox (badness 10000) in paragraph at lines 15049--15053 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15060--15063 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [215] [216] [217] [218] Underfull \hbox (badness 3965) in paragraph at lines 15357--15361 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] Underfull \hbox (badness 4429) in paragraph at lines 16146--16149 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [231] Underfull \hbox (badness 10000) in paragraph at lines 16252--16254 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [232] Underfull \hbox (badness 2035) in paragraph at lines 16325--16329 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [233] [234] [235] [236] [237] [238] [239] [240] [241] Underfull \hbox (badness 2452) in paragraph at lines 16938--16942 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 16938--16942 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [242] [243] [244] Underfull \hbox (badness 1092) in paragraph at lines 17111--17116 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [245] [246] [247] Underfull \hbox (badness 6741) in paragraph at lines 17364--17368 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [248] [249] [250] Underfull \vbox (badness 10000) has occurred while \output is active [251] [252] [253] [254] [255] [256] [257] Underfull \vbox (badness 10000) has occurred while \output is active [258] Underfull \vbox (badness 10000) has occurred while \output is active [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] Underfull \hbox (badness 1478) in paragraph at lines 18857--18860 []\T1/ptm/m/n/10 A char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [269] [270] [271] Underfull \hbox (badness 10000) in paragraph at lines 19127--19129 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / [272] Underfull \hbox (badness 2088) in paragraph at lines 19133--19142 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [273] [274] [275] [276] [277] [278] [279] [280] Underfull \hbox (badness 1442) in paragraph at lines 19741--19743 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [281] [282] [283] [284] [285] Underfull \hbox (badness 10000) in paragraph at lines 20074--20080 [286] [287] [288] Underfull \hbox (badness 1248) in paragraph at lines 20319--20322 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [289] [290] [291] [292] [293] Underfull \hbox (badness 4739) in paragraph at lines 20582--20584 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [294] [295] [296] [297] [298] [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] [309] Underfull \hbox (badness 2469) in paragraph at lines 21666--21671 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [310] Underfull \hbox (badness 1675) in paragraph at lines 21753--21762 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 21763--21776 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the [311] Underfull \hbox (badness 10000) in paragraph at lines 21811--21814 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 21811--21814 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [312] [313] Underfull \hbox (badness 1014) in paragraph at lines 21945--21950 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [314] [315] [316] [317] [318] [319] [320] [321] [322] [323] [324] [325] Underfull \hbox (badness 1264) in paragraph at lines 22792--22800 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: Underfull \hbox (badness 4441) in paragraph at lines 22826--22829 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] Underfull \hbox (badness 5231) in paragraph at lines 23631--23633 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [338] [339] [340] [341] [342] [343] [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] Underfull \hbox (badness 10000) in paragraph at lines 24724--24730 [][]$\T1/zi4/m/n/10 https : / / zlib . net/$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m /n/10 https : / / en . wikipedia . org / wiki / Gzip$[][]\T1/ptm/m/n/10 , [][]$ \T1/zi4/m/n/10 http : / / www . bzip . org/$[][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 24724--24730 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , [][]$\T1/zi4/m/n/10 https : / / tukaani . org / xz/$[][] \T1/ptm/m/n/ 10 and [][]$\T1/zi4/m/n/10 https : [354] [355] [356] [357] [358] [359] [360] Underfull \hbox (badness 2790) in paragraph at lines 25220--25223 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25220--25223 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [361] [362] [363] [364] [365] Underfull \hbox (badness 1194) in paragraph at lines 25543--25546 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [366] [367] [368] Underfull \hbox (badness 2368) in paragraph at lines 25750--25756 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [369] [370] [371] [372] [373] Underfull \hbox (badness 10000) in paragraph at lines 26140--26143 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [374] [375] [376] [377] [378] [379] [380] [381] [382] Underfull \hbox (badness 10000) in paragraph at lines 26761--26763 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [383] [384] [385] [386] [387] [388] [389] Underfull \hbox (badness 2443) in paragraph at lines 27249--27257 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 1881) in paragraph at lines 27667--27670 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 27692--27694 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [396] [397] Underfull \hbox (badness 2142) in paragraph at lines 27833--27837 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 27890--27895 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [398] [399] [400] Underfull \hbox (badness 10000) in paragraph at lines 28184--28190 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28184--28190 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28184--28190 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 10000) in paragraph at lines 28197--28200 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence[][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/pt m/m/n/10 and [401] Underfull \hbox (badness 2689) in paragraph at lines 28223--28225 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see Underfull \hbox (badness 10000) in paragraph at lines 28265--28270 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28271--28282 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28271--28282 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28283--28286 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [402] [403] [404] [405] [406] [407] Underfull \hbox (badness 10000) in paragraph at lines 28692--28696 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 28839--28842 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [410] Underfull \hbox (badness 7925) in paragraph at lines 28920--28924 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 28920--28924 [][][]\T1/zi4/m/n/10 parse[][][](text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][]\T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 28925--28934 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to [][][]\T1/zi4/m/n/10 parse[][][](text = s, [411] [412] [413] [414] [415] [416] [417] [418] [419] [420] [421] [422] [423] [424] Underfull \hbox (badness 2726) in paragraph at lines 29929--29932 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [425] [426] [427] [428] [429] [430] [431] [432] [433] [434] [435] [436] [437] [438] [439] [440] [441] [442] Underfull \vbox (badness 10000) has occurred while \output is active [443] [444] [445] [446] [447] [448] [449] [450] Underfull \hbox (badness 1533) in paragraph at lines 31726--31729 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [451] [452] [453] Underfull \hbox (badness 1163) in paragraph at lines 31889--31900 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] Underfull \hbox (badness 10000) in paragraph at lines 33555--33559 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 33555--33559 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 33576--33578 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 33579--33583 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [478] [479] [480] [481] [482] [483] [484] [485] [486] Underfull \hbox (badness 1655) in paragraph at lines 34175--34177 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [487] [488] [489] [490] [491] [492] [493] [494] [495] [496] [497] [498] [499] [500] [501] [502] [503] [504] Underfull \hbox (badness 2261) in paragraph at lines 35381--35386 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [505] [506] [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] Underfull \hbox (badness 3668) in paragraph at lines 36416--36420 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [519] Underfull \hbox (badness 10000) in paragraph at lines 36507--36518 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [520] [521] [522] [523] [524] [525] [526] [527] [528] [529] [530] [531] [532] [533] [534] [535] [536] Underfull \vbox (badness 10000) has occurred while \output is active [537] [538] [539] [540] [541] Underfull \hbox (badness 10000) in paragraph at lines 38052--38054 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [542] Underfull \vbox (badness 10000) has occurred while \output is active [543] [544] [545] [546] [547] Underfull \hbox (badness 2913) in paragraph at lines 38472--38476 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [548] [549] [550] Underfull \hbox (badness 1072) in paragraph at lines 38718--38722 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 38723--38727 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', [551] Underfull \hbox (badness 10000) in paragraph at lines 38763--38769 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 38763--38769 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 38763--38769 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in Underfull \hbox (badness 3009) in paragraph at lines 38778--38785 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 38778--38785 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 38778--38785 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 38778--38785 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [552] [553] [554] Underfull \hbox (badness 2644) in paragraph at lines 39013--39017 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [555] [556] [557] Underfull \hbox (badness 1142) in paragraph at lines 39170--39176 []\T1/ptm/m/n/10 A char-ac-ter string. The de-fault for the []\T1/zi4/m/n/10 fo rmat []\T1/ptm/m/n/10 meth-ods is []\T1/zi4/m/n/10 "%Y-%m-%d [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] [570] [571] [572] [573] [574] [575] [576] Underfull \hbox (badness 1158) in paragraph at lines 40529--40531 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] Underfull \hbox (badness 1137) in paragraph at lines 41124--41130 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41143--41148 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [587] Underfull \hbox (badness 1616) in paragraph at lines 41263--41268 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [588] [589] [590] [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 1472) in paragraph at lines 41810--41813 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [597] [598] [599] [600] [601] [602] [603] [604] [605] [606] [607] [608] [609] Underfull \hbox (badness 10000) in paragraph at lines 42736--42740 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/n/10 bin []\T1/ptm/m/n/10 can have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4/ m/n/10 length(bin) > [610] [611] [612] [613] Underfull \hbox (badness 10000) in paragraph at lines 42995--42998 [][][]\T1/zi4/m/n/10 getTaskCallbackNames[][][] [][]taskCallbackManager[][][] [ ][]$https : / / developer . r-[]project . org / [614] [615] [616] Underfull \hbox (badness 10000) in paragraph at lines 43179--43183 [][][]\T1/zi4/m/n/10 addTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 removeTaskCallback[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 taskCallback Manager[][][][]\T1/ptm/m/n/10 \ [][]$\T1/zi4/m/n/10 https : / / developer . [617] [618] [619] [620] [621] [622] [623] [624] Underfull \hbox (badness 10000) in paragraph at lines 43828--43831 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Time _ zone$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / data . iana . org / time-[ ]zones / [625] [626] [627] [628] [629] [630] Underfull \vbox (badness 10000) has occurred while \output is active [631] [632] [633] [634] [635] [636] [637] Underfull \hbox (badness 1990) in paragraph at lines 44749--44757 []\T1/zi4/m/n/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps any er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 44749--44757 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/n/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [638] [639] [640] [641] [642] [643] [644] [645] [646] [647] [648] [649] [650] [651] [652] Underfull \hbox (badness 2452) in paragraph at lines 45746--45752 [][][]\T1/zi4/m/n/10 file[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.acc ess[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.append[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/n/10 file.copy[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/ 10 file.create[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.exists[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [653] [654] [655] [656] [657] Underfull \hbox (badness 3668) in paragraph at lines 46144--46146 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the call should be out-put im-me-di- ately, even if [658] [659] Underfull \hbox (badness 2401) in paragraph at lines 46274--46278 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/n/10 options[][][]("w arn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [660] [661] Underfull \hbox (badness 3492) in paragraph at lines 46398--46400 []\T1/zi4/m/n/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 months []\T1/pt m/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [662] Underfull \hbox (badness 2111) in paragraph at lines 46484--46489 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/n/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [663] [664] [665] [666] Underfull \hbox (badness 4001) in paragraph at lines 46730--46732 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/n/10 https : / / developer . [667] [668] [669] [670] [671] Underfull \hbox (badness 5417) in paragraph at lines 47095--47099 []\T1/zi4/m/n/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-ren tly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [672] Underfull \hbox (badness 10000) in paragraph at lines 47156--47160 []\T1/zi4/m/n/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-da rd' reg-exps, in-clud-ing el-e-ments named [673]) (./compiler-pkg.tex [674] Chapter 2. [675] [676] [677] [678]) (./datasets-pkg.tex Chapter 3. [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] [690] [691] [692] [693] [694] Underfull \hbox (badness 1097) in paragraph at lines 1037--1041 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [695] [696] [697] [698] [699] [700] [701] [702] [703] [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] [726] [727] [728] [729] [730] [731] [732] [733] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3508--3508 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [734] [735] [736] [737] [738] [739] [740] [741] [742] [743] [744] [745] [746] [747] [748] [749] [750] [751] [752] [753] [754]) (./grDevices-pkg.tex Chapter 4. [755] [756] [757] [758] Underfull \hbox (badness 2221) in paragraph at lines 282--286 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/n/10 c(mi, ma, n.)[]\ T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 298--303 []\T1/ptm/m/n/10 Apart from that, [][][]\T1/zi4/m/n/10 axisTicks[][][]() []\T1/ ptm/m/n/10 just calls the C func-tion []\T1/zi4/m/n/10 CreateAtVector() []\T1/p tm/m/n/10 in Underfull \hbox (badness 1852) in paragraph at lines 298--303 \T1/ptm/m/n/10 `\T1/zi4/m/n/10 /src/main/plot.c\T1/ptm/m/n/10 ' which is also called by the base \T1/ptm/b/n/10 graph-ics \T1/ptm/m/n/10 pack-age func-t ion [759] [760] [761] [762] [763] [764] [765] [766] [767] Underfull \hbox (badness 1424) in paragraph at lines 899--901 [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) an d []\T1/zi4/m/n/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also be spec-i-fied as [768] [769] [770] [771] [772] Underfull \hbox (badness 5175) in paragraph at lines 1193--1195 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [773] [774] Underfull \hbox (badness 2512) in paragraph at lines 1312--1314 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/n/10 https : / / web . arc hive . org / web / 20190613001950 / http : / / efg2 . com / [775] [776] [777] [778] Underfull \hbox (badness 1490) in paragraph at lines 1612--1617 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/n/10 rasterImage[][][] []\T1/ptm/m/n/10 and [ ][][]\T1/zi4/m/n/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues []\T 1/zi4/m/n/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1625--1629 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [779] [780] [781] [782] [783] [784] Underfull \hbox (badness 1325) in paragraph at lines 2040--2050 []\T1/zi4/m/n/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngmono"[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "pngalph a"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/1 0 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "bmp32b"[]\T1/ptm/m/n/10 , [785] [786] Underfull \hbox (badness 10000) in paragraph at lines 2152--2154 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [787] [788] Underfull \hbox (badness 6758) in paragraph at lines 2338--2341 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [789] [790] [791] [792] Underfull \vbox (badness 10000) has occurred while \output is active [793] [794] [795] [796] [797] [798] [799] [800] Underfull \hbox (badness 10000) in paragraph at lines 3089--3090 [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] [812] [813] [814] [815] Underfull \vbox (badness 10000) has occurred while \output is active [816] Underfull \hbox (badness 10000) in paragraph at lines 4165--4168 []\T1/ptm/m/n/10 For use with []\T1/zi4/m/n/10 onefile = FALSE []\T1/ptm/m/n/10 give a C in-te-ger for-mat such as [817] [818] [819] [820] [821] [822] [823] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4681 \aliasA{symbol}{plotmath}{symbol} [824] [825] [826] [827] Underfull \vbox (badness 10000) has occurred while \output is active [828] [829] Underfull \hbox (badness 1584) in paragraph at lines 5067--5069 []\T1/ptm/m/n/10 For type []\T1/zi4/m/n/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1/ zi4/m/n/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5071--5078 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [830] [831] [832] [833] Underfull \hbox (badness 1377) in paragraph at lines 5379--5384 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [834] Underfull \hbox (badness 1418) in paragraph at lines 5455--5462 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\ T1/zi4/m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m /n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvet ica-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 1755) in paragraph at lines 5473--5475 []\T1/ptm/m/n/10 Another type of fam-ily makes use of CID-keyed fonts for East Asian lan-guages -- see [835] Underfull \hbox (badness 1377) in paragraph at lines 5584--5589 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/n/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [836] Underfull \hbox (badness 7344) in paragraph at lines 5653--5655 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [837] [838] Underfull \hbox (badness 2035) in paragraph at lines 5791--5800 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5791--5800 \T1/ptm/m/n/10 vided: []\T1/zi4/m/n/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Courier"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Helvetica-Na rrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5791--5800 []\T1/zi4/m/n/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "Pal atino" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 "Times"[]\T1/ptm/m/n/10 ; []\T1/zi 4/m/n/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "URWBookman"[]\T1/ptm/m /n/10 , [839] [840] Underfull \hbox (badness 10000) in paragraph at lines 5859--5861 []\T1/zi4/m/n/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/z i4/m/n/10 https : / / ftp . gnu . org / pub / non-[]gnu / [841] [842] Underfull \hbox (badness 1546) in paragraph at lines 6004--6012 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/n/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi4 /m/n/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 title[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fg[]\T1/ptm/m/n/10 , [] \T1/zi4/m/n/10 width[]\T1/ptm/m/n/10 , [843] [844] [845] [846] [847] [848] [849] [850] Underfull \hbox (badness 10000) in paragraph at lines 6543--6546 []\T1/zi4/m/n/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space (r ed/green/blue) into HSV space [851] [852] [853] [854] [855] [856] [857] [858] [859] [860] [861] [862] Underfull \hbox (badness 1189) in paragraph at lines 7372--7374 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [863] Underfull \hbox (badness 10000) in paragraph at lines 7477--7479 []\T1/zi4/m/n/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for CJ K lan-guages and [864] [865] [866] [867] [868] Underfull \hbox (badness 3780) in paragraph at lines 7791--7797 []\T1/ptm/m/n/10 the font fam-ily to be used. This must be one of []\T1/zi4/m/n /10 "AvantGarde"[]\T1/ptm/m/n/10 , [869] [870] [871] [872] [873]) (./graphics-pkg.tex [874] Chapter 5. [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] [887] [888] [889] [890] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1034--1034 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] Underfull \vbox (badness 10000) has occurred while \output is active [891] [892] [893] [894] [895] Underfull \hbox (badness 4634) in paragraph at lines 1408--1411 [][][]\T1/zi4/m/n/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready work s nowa-days with data.frames; [][][]\T1/zi4/m/n/10 boxplot.formula[][][][]\T1/p tm/m/n/10 , [896] [897] [898] [899] [900] [901] [902] [903] [904] [905] [906] [907] [908] [909] [910] [911] Underfull \hbox (badness 1728) in paragraph at lines 2388--2390 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/n/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [912] Underfull \hbox (badness 1009) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [913] [914] [915] [916] [917] [918] [919] [920] [921] [922] [923] [924] [925] [926] [927] [928] [929] [930] [931] [932] [933] Underfull \vbox (badness 10000) has occurred while \output is active [934] Underfull \vbox (badness 10000) has occurred while \output is active [935] [936] [937] [938] [939] [940] [941] [942] [943] [944] [945] [946] Underfull \hbox (badness 3229) in paragraph at lines 4715--4720 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [947] [948] [949] [950] [951] Underfull \hbox (badness 1107) in paragraph at lines 5144--5150 []\T1/ptm/m/n/10 is []\T1/zi4/m/n/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sca led to user co-or-di-nates. Note that []\T1/zi4/m/n/10 c([][]strwidth[][][](ch) , [952] Underfull \hbox (badness 10000) in paragraph at lines 5273--5276 [953] Underfull \hbox (badness 10000) in paragraph at lines 5334--5336 [954 ] [955 ] [956] [957] [958] [959] [960] [961] [962] [963] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6005 \aliasA{plot}{plot.default}{plot} [964] [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] [976] [977] Overfull \hbox (31.57222pt too wide) in paragraph at lines 6909--6910 [][] [978 ] [979] [980] [981] [982] [983] [984] [985] [986] [987] [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] [1005] [1006] [1007] [1008] [1009] Underfull \hbox (badness 4954) in paragraph at lines 9001--9003 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /n/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9003--9005 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/n/10 par (c("font.lab", "cex.lab", [1010] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9083 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9083 \HeaderA{units}{Graphical Units}{units} [1011] [1012] [1013] [1014]) (./grid-pkg.tex Chapter 6. [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] Underfull \hbox (badness 2680) in paragraph at lines 550--553 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/n/10 preDrawDetails []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal-c u-la-tion of [1024] [1025] [1026] [1027] [1028] [1029] [1030] [1031] [1032] Underfull \hbox (badness 4279) in paragraph at lines 1187--1196 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/n/10 pushViewport[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/n/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 seekViewpo rt[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 upViewport[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 unit[][][][]\T1/ptm/m/n/10 , [1033] Underfull \vbox (badness 10000) has occurred while \output is active [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] [1043] [1044] [1045] [1046] [1047] [1048] [1049] [1050] [1051] [1052] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] [1062] Underfull \hbox (badness 10000) in paragraph at lines 3102--3104 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] [1076] [1077] Underfull \vbox (badness 10000) has occurred while \output is active [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] Underfull \hbox (badness 1067) in paragraph at lines 4840--4843 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1091] [1092] [1093] [1094] [1095] Underfull \hbox (badness 7256) in paragraph at lines 5191--5193 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1096] [1097] [1098] [1099] [1100] [1101] [1102] Underfull \hbox (badness 2142) in paragraph at lines 5645--5649 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/n/10 gridGTreeCoords []\T1/ptm/m/n/1 0 a list of ei-ther []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1103] [1104] Underfull \hbox (badness 4699) in paragraph at lines 5727--5732 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/n/10 "GridGrobCoords" []\T1/ptm/m/n/10 ob -ject (a list of lists with com-po-nents []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 an d []\T1/zi4/m/n/10 y[]\T1/ptm/m/n/10 ) or a [1105] [1106] [1107] [1108] [1109] [1110] [1111] [1112] [1113] [1114] [1115] [1116] [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134]) (./methods-pkg.tex Chapter 7. [1135] [1136] [1137] [1138] [1139] [1140] [1141] [1142] Underfull \vbox (badness 10000) has occurred while \output is active [1143] Underfull \vbox (badness 10000) has occurred while \output is active [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] Underfull \hbox (badness 2237) in paragraph at lines 1385--1387 []\T1/ptm/m/n/10 The class []\T1/zi4/m/n/10 "className" []\T1/ptm/m/n/10 ex-ten ds []\T1/zi4/m/n/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/n/1 0 "package"[]\T1/ptm/m/n/10 , also of class [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] Underfull \hbox (badness 10000) in paragraph at lines 1981--1986 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m/n/ 10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1981--1986 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/n/10 insertSource []\T1/ptm/m /n/10 it calls []\T1/zi4/m/n/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1161] [1162] [1163] Underfull \hbox (badness 2213) in paragraph at lines 2213--2218 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/n/10 where = [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 2573--2576 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/n/10 setGeneric[][][] []\ T1/ptm/m/n/10 and [][][]\T1/zi4/m/n/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 c re-ate ob-jects of class [1169] [1170] Underfull \hbox (badness 1132) in paragraph at lines 2713--2717 []\T1/ptm/m/n/10 In []\T1/zi4/m/n/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi4 /m/n/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/n/10 package []\T1/ptm/m/n/10 sl ot of the re-turned re-sult is in Underfull \hbox (badness 1033) in paragraph at lines 2745--2750 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/n/10 removeGeneric []\T1/ptm/m/n/10 r e-moves the func-tion it-self; []\T1/zi4/m/n/10 removeMethods []\T1/ptm/m/n/10 re-stores the [1171] [1172] [1173] [1174] [1175] [1176] [1177] Underfull \hbox (badness 1102) in paragraph at lines 3302--3304 []\T1/zi4/m/n/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1178] [1179] [1180] [1181] [1182] Underfull \hbox (badness 10000) in paragraph at lines 3641--3650 []\T1/ptm/m/n/10 The [1183] [1184] Underfull \hbox (badness 10000) in paragraph at lines 3761--3762 [] \T1/zi4/m/n/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longit ude = "numeric", [1185] Underfull \hbox (badness 10000) in paragraph at lines 3845--3846 []\T1/zi4/m/n/10 Currency <- setClass("Currency", slots = c(unit = "character") , contains = [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] Underfull \hbox (badness 1769) in paragraph at lines 4476--4482 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/n/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4476--4482 []\T1/zi4/m/n/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [] [][]\T1/zi4/m/n/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion use d by [1194] [1195] [1196] [1197] [1198] [1199] [1200] [1201] [1202] Underfull \vbox (badness 10000) has occurred while \output is active [1203] Underfull \vbox (badness 10000) has occurred while \output is active [1204] [1205] [1206] Underfull \hbox (badness 4036) in paragraph at lines 5445--5448 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/n/10 "PossibleMethod" []\T1/ptm/m/ n/10 the method to use in re-sponse to a [1207] Underfull \hbox (badness 3803) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1208] [1209] [1210] Underfull \hbox (badness 1087) in paragraph at lines 5752--5757 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1211] [1212] [1213] [1214] [1215] [1216] [1217] [1218] Underfull \hbox (badness 1675) in paragraph at lines 6459--6465 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/n/10 externalRef Method(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1219] [1220] [1221] [1222] Underfull \vbox (badness 10000) has occurred while \output is active [1223] [1224] [1225] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6981 \aliasA{S4}{S3Part}{S4} [1226] [1227] [1228] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7237 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7239 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7240 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7242 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7243 \aliasA{Summary}{S4groupGeneric}{Summary} [1229] Underfull \hbox (badness 2050) in paragraph at lines 7304--7308 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1230] [1231] Underfull \hbox (badness 1286) in paragraph at lines 7492--7494 []\T1/ptm/m/n/10 for []\T1/zi4/m/n/10 .selectSuperClasses() []\T1/ptm/m/n/10 on ly, a [][][]\T1/zi4/m/n/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, t yp-i-cally [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245] [1246] [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] [1255] [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] [1266] [1267] [1268] [1269] [1270] [1271] Underfull \hbox (badness 1852) in paragraph at lines 10572--10576 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1272] [1273] [1274]) (./parallel-pkg.tex Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/n/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [][] RNG[][][]: see [1275] [1276] [1277] [1278] Underfull \hbox (badness 1320) in paragraph at lines 301--304 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1279] [1280] [1281] [1282] [1283] [1284] [1285] [1286] [1287] [1288] [1289] [1290] [1291] [1292] [1293] [1294] Underfull \hbox (badness 3386) in paragraph at lines 1394--1397 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/n/10 .Random.seed []\T1/ptm/m/n/10 when the [1295] [1296] [1297]) (./splines-pkg.tex [1298] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/n/10 \T1/ptm/ m/n/10 and William N. Ven-ables [1299] [1300] [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] [1311] [1312]) (./stats-pkg.tex Chapter 10. [1313] [1314] [1315] [1316] [1317] [1318] [1319] [1320] [1321] [1322] [1323] [1324] [1325] Underfull \hbox (badness 1412) in paragraph at lines 892--894 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/n/10 l m []\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 aov[]\T1/ptm/m/n/10 , or a for-mula for [1326] [1327] [1328] [1329] [1330] [1331] [1332] Underfull \hbox (badness 2503) in paragraph at lines 1374--1377 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1333] [1334] [1335] [1336] [1337] [1338] [1339] [1340] [1341] [1342] [1343] [1344] [1345] [1346] [1347] [1348] [1349] [1350] [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] Underfull \hbox (badness 2503) in paragraph at lines 3537--3540 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1365] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3649. [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] [1379] [1380] [1381] [1382] [1383] Underfull \hbox (badness 3989) in paragraph at lines 4794--4801 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 2556) in paragraph at lines 5435--5438 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/n/10 "circular"[] \T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "fi lter"[]\T1/ptm/m/n/10 . For [1393] [1394] [1395] [1396] [1397] [1398] Underfull \hbox (badness 2503) in paragraph at lines 5849--5853 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1399] [1400] [1401] [1402] [1403] [1404] [1405] [1406] [1407] [1408] [1409] [1410] Underfull \hbox (badness 7081) in paragraph at lines 6643--6646 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/n/10 "hclust" []\T1/ptm/m/n/10 ca n be con-verted to class []\T1/zi4/m/n/10 "dendrogram" []\T1/ptm/m/n/10 us-ing method Underfull \hbox (badness 10000) in paragraph at lines 6647--6649 []\T1/zi4/m/n/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro-g ram []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1411] Underfull \vbox (badness 10000) has occurred while \output is active [1412] [1413] [1414] [1415] Underfull \vbox (badness 10000) has occurred while \output is active [1416] [1417] [1418] Underfull \vbox (badness 10000) has occurred while \output is active [1419] [1420] [1421] [1422] [1423] Underfull \hbox (badness 10000) in paragraph at lines 7522--7525 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from [][][] \T1/zi4/m/n/10 dist[][][]()[]\T1/ptm/m/n/10 , the [1424] [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440] [1441] [1442] [1443] Underfull \vbox (badness 10000) has occurred while \output is active [1444] [1445] [1446] [1447] [1448] Underfull \hbox (badness 2626) in paragraph at lines 9217--9220 []\T1/ptm/m/n/10 Either []\T1/zi4/m/n/10 "convolution" []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1449] [1450] Underfull \hbox (badness 2503) in paragraph at lines 9324--9328 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1451] [1452] [1453] [1454] [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] [1463] [1464] [1465] [1466] [1467] [1468] [1469] Underfull \hbox (badness 4518) in paragraph at lines 10676--10681 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1470] [1471] [1472] [1473] [1474] Underfull \hbox (badness 2142) in paragraph at lines 11037--11040 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11056--11059 []\T1/ptm/m/n/10 When []\T1/zi4/m/n/10 trace []\T1/ptm/m/n/10 is true, calls to [][][]\T1/zi4/m/n/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for each IWLS it-er-a-tion. Hence, [1475] Underfull \hbox (badness 1708) in paragraph at lines 11118--11122 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1476] [1477] [1478] [1479] [1480] Underfull \hbox (badness 1694) in paragraph at lines 11514--11517 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.11995 \aliasA{hat}{influence.measures}{hat} [1489] [1490] Underfull \hbox (badness 1484) in paragraph at lines 12137--12139 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/n/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1491] [1492] [1493] [1494] [1495] [1496] [1497] [1498] [1499] Underfull \hbox (badness 10000) in paragraph at lines 12739--12741 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/n/10 solve.de fault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/n/10 SSinit = [1500] [1501] [1502] [1503] [1504] Underfull \hbox (badness 2894) in paragraph at lines 13075--13079 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1505] [1506] [1507] [1508] [1509] [1510] Underfull \hbox (badness 1496) in paragraph at lines 13498--13504 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 4518) in paragraph at lines 13896--13901 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 4518) in paragraph at lines 14556--14561 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1527] [1528] Underfull \hbox (badness 6412) in paragraph at lines 14694--14698 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/n/10 (surface = "inte rpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14701--14703 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/n/10 family []\T1/ptm/m/n/10 is [1529] [1530] [1531] [1532] [1533] [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] Underfull \hbox (badness 2503) in paragraph at lines 15777--15781 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , [1546] [1547] [1548] [1549] [1550] [1551] [1552] Underfull \hbox (badness 10000) in paragraph at lines 16289--16295 []\T1/zi4/m/n/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/n/ 10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16289--16295 []\T1/zi4/m/n/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 model.re sponse(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/n/10 model.offset []\T1/ ptm/m/n/10 sums any terms [1553] [1554] [1555] [1556] [1557] [1558] [1559] [1560] [1561] [1562] [1563] [1564] [1565] [1566] [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] [1576] [1577] Underfull \hbox (badness 1158) in paragraph at lines 17944--17947 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/n/10 nls []\T1 /ptm/m/n/10 as the data ar-gu-ment. The ac- [1578] [1579] Underfull \vbox (badness 10000) has occurred while \output is active [1580] Underfull \vbox (badness 10000) has occurred while \output is active [1581] [1582] [1583] [1584] [1585] [1586] [1587] [1588] [1589] [1590] [1591] [1592] [1593] Underfull \hbox (badness 1377) in paragraph at lines 18978--18983 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 18983--18986 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 18996--19000 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 18996--19000 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/n/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19004--19008 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/n/10 "BFGS"[]\T 1/ptm/m/n/10 , []\T1/zi4/m/n/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/n/1 0 "SANN" []\T1/ptm/m/n/10 meth-ods if [1594] [1595] [1596] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19229--19229 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Underfull \vbox (badness 10000) has occurred while \output is active [1597] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19232--19232 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1598] [1599] [1600] [1601] [1602] [1603] Underfull \hbox (badness 1337) in paragraph at lines 19691--19694 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1604] [1605] [1606] [1607] [1608] [1609] [1610] [1611] Underfull \hbox (badness 10000) in paragraph at lines 20162--20168 \T1/zi4/m/n/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/n/10 s distance", lty = cook.lty, col = cook.col, text.col [1612] [1613] [1614] [1615] [1616] Underfull \hbox (badness 1194) in paragraph at lines 20500--20503 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1617] [1618] [1619] [1620] [1621] [1622] [1623] Underfull \hbox (badness 2503) in paragraph at lines 20879--20882 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/n/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 20906--20908 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/n/10 "Exact Poisson test" [ ]\T1/ptm/m/n/10 or []\T1/zi4/m/n/10 "Comparison of Poisson [1624] [1625] [1626] [1627] [1628] [1629] [1630] [1631] [1632] [1633] [1634] [1635] [1636] [1637] [1638] [1639] Underfull \hbox (badness 10000) in paragraph at lines 21985--21991 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/n/10 predict.ar[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 predict.Arima[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/n/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1640] [1641] [1642] [1643] [1644] [1645] [1646] [1647] [1648] [1649] [1650] [1651] [1652] [1653] [1654] [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 1337) in paragraph at lines 23383--23389 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] Underfull \hbox (badness 1436) in paragraph at lines 23873--23876 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/n/10 max(2, [1670] Underfull \hbox (badness 10000) in paragraph at lines 24014--24015 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . or g / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1671] [1672] [1673] [1674] [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] Underfull \hbox (badness 1824) in paragraph at lines 24986--24992 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/n/10 x []\T1/ptm/m/n/10 are f irst re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 24986--24992 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25007--25010 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/n/10 y = r unmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/n/10 y[j] = [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \vbox (badness 10000) has occurred while \output is active [1693] [1694] Underfull \hbox (badness 2165) in paragraph at lines 25589--25594 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/n/10 "selfStart" []\T1 /ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/n/10 SSasymp[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1695] [1696] [1697] Underfull \hbox (badness 1867) in paragraph at lines 25799--25801 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 25815--25819 []\T1/ptm/m/n/10 where []\T1/zi4/m/n/10 NN <- [][]nobs[][][](object, use.fallba ck = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 PP <- [1698] [1699] [1700] [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] Underfull \vbox (badness 10000) has occurred while \output is active [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] Underfull \vbox (badness 10000) has occurred while \output is active [1721] [1722] Underfull \hbox (badness 3514) in paragraph at lines 27476--27481 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1723] [1724] [1725] Overfull \hbox (2.23795pt too wide) in paragraph at lines 27710--27710 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1726] Underfull \hbox (badness 3514) in paragraph at lines 27746--27752 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1727] Overfull \hbox (20.23795pt too wide) in paragraph at lines 27803--27803 []\T1/zi4/m/n/9 fmX1 <- nls(conc ~ SSbiexp(time, A1, lrc1, A2, lrc2), data = d atN, control = list(scaleOffset=1))[] Overfull \hbox (11.22874pt too wide) in paragraph at lines 27805--27805 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol=1 e-11, nDcentral=TRUE), trace=TRUE)[] [1728] [1729] [1730] Underfull \hbox (badness 3514) in paragraph at lines 27979--27984 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1731] Underfull \hbox (badness 3514) in paragraph at lines 28066--28071 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1732] Underfull \hbox (badness 3514) in paragraph at lines 28131--28136 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1733] [1734] Underfull \hbox (badness 3514) in paragraph at lines 28225--28230 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 inpu t[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1735] Underfull \hbox (badness 6691) in paragraph at lines 28317--28322 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/n/10 x[]\ T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] Underfull \hbox (badness 4024) in paragraph at lines 28808--28811 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1744] [1745] [1746] [1747] [1748] [1749] [1750] [1751] [1752] Underfull \hbox (badness 5431) in paragraph at lines 29417--29419 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1753] [1754] [1755] [1756] Underfull \hbox (badness 5431) in paragraph at lines 29627--29630 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/n/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1757] [1758] [1759] [1760] [1761] Underfull \hbox (badness 1337) in paragraph at lines 29942--29946 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1762] [1763] [1764] [1765] Underfull \hbox (badness 1616) in paragraph at lines 30261--30264 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1766] [1767] [1768] [1769] [1770] [1771] [1772] [1773] [1774] [1775] [1776] [1777] [1778] [1779] [1780] [1781] [1782] [1783] [1784] Underfull \hbox (badness 3557) in paragraph at lines 31485--31489 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/n/10 extendInt []\T1/ptm/m/n/10 to a non-[ ]\T1/zi4/m/n/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-rect []\T1/zi4/m/n/10 interval = [1785] [1786] [1787] [1788] [1789] [1790] Underfull \hbox (badness 1337) in paragraph at lines 31852--31856 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1791] [1792] [1793] [1794] [1795] [1796] [1797] [1798] Underfull \hbox (badness 1337) in paragraph at lines 32381--32385 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1799] [1800] [1801] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32589--32589 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1802] [1803] Overfull \hbox (19.71954pt too wide) in paragraph at lines 32750--32750 [] \T1/zi4/m/n/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.eps = getOption("ts.eps"), ...)[] [1804] [1805] [1806] [1807] [1808]) (./stats4-pkg.tex Chapter 11. [1809] [1810] [1811] Underfull \vbox (badness 10000) has occurred while \output is active [1812] [1813] [1814] [1815] [1816] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1817] [1818] [1819]) (./tcltk-pkg.tex [1820] Chapter 12. [1821] [1822] [1823] [1824] [1825] [1826] [1827] Underfull \vbox (badness 10000) has occurred while \output is active [1828] Underfull \hbox (badness 1546) in paragraph at lines 671--678 []\T1/zi4/m/n/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call-i ng any Tk or Tcl com-mand by sim-ply run-ning [1829] [1830] [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840]) (./tools-pkg.tex Chapter 13. [1841] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [1842] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/n/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing will be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [1843] [1844] Underfull \hbox (badness 1308) in paragraph at lines 288--301 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 288--301 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/n/10 bi bentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatIn Proceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatManual[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/n/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 288--301 []\T1/zi4/m/n/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatPhdthesis[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1/zi 4/m/n/10 formatTechreport []\T1/ptm/m/n/10 and [1845] Underfull \hbox (badness 3039) in paragraph at lines 392--394 []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gin e to use. Over-rides any [1846] [1847] Underfull \hbox (badness 1142) in paragraph at lines 464--468 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [1848] [1849] [1850] [1851] [1852] [1853] [1854] [1855] [1856] [1857] [1858] Underfull \hbox (badness 1014) in paragraph at lines 1188--1190 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1194--1196 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [1859] Underfull \hbox (badness 10000) in paragraph at lines 1231--1234 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1231--1234 []\T1/zi4/m/n/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and [ ]\T1/zi4/m/n/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [1860] [1861] [1862] [1863] [1864] Underfull \hbox (badness 10000) in paragraph at lines 1606--1609 []\T1/ptm/m/n/10 Internal func-tions []\T1/zi4/m/n/10 CRAN_aliases_db[]\T1/ptm/ m/n/10 , []\T1/zi4/m/n/10 CRAN_archive_db[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CR AN_current_db []\T1/ptm/m/n/10 and [1865] [1866] Underfull \hbox (badness 4096) in paragraph at lines 1725--1733 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string Underfull \hbox (badness 1082) in paragraph at lines 1735--1737 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/n/10 NULL []\T1/ptm/m/n/10 for all known trees (see [1867] [1868] [1869] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.1937 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.1938 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [1870] [1871] [1872] [1873] [1874] [1875] [1876] Underfull \hbox (badness 3386) in paragraph at lines 2412--2415 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/n/10 as.Rconcordance []\T1/ ptm/m/n/10 searches for strings match-ing the pat-tern of [1877] [1878] Underfull \hbox (badness 4096) in paragraph at lines 2552--2560 \T1/zi4/m/n/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [1879] [1880] [1881] [1882] [1883] [1884] [1885] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 3046. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 3047. LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 3047. [1886] [1887] [1888] [1889] [1890] Underfull \hbox (badness 1424) in paragraph at lines 3358--3360 []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [1891] [1892] [1893] [1894] [1895] [1896] [1897] [1898] [1899] [1900] Underfull \hbox (badness 10000) in paragraph at lines 4074--4076 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [1901] [1902] Underfull \hbox (badness 10000) in paragraph at lines 4213--4216 []\T1/ptm/m/n/10 Where sup-ported ([]\T1/zi4/m/it/10 texi2dvi []\T1/ptm/m/n/10 5.0 and later; []\T1/zi4/m/it/10 texify.exe []\T1/ptm/m/n/10 from MiK-TeX), op- tion [1903] [1904] [1905] [1906] [1907] Underfull \hbox (badness 1796) in paragraph at lines 4571--4576 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/it/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/it/10 type = = [1908] Underfull \hbox (badness 4699) in paragraph at lines 4621--4625 []\T1/ptm/m/n/10 a string, by de-fault empty, of op-tions to []\T1/zi4/m/it/10 msgmerge []\T1/ptm/m/n/10 in ad-di-tion to Underfull \hbox (badness 1946) in paragraph at lines 4621--4625 []\T1/zi4/m/it/10 "--update"[]\T1/ptm/m/n/10 . Since \T1/phv/m/n/10 R \T1/ptm/m /n/10 4.2.0, []\T1/zi4/m/it/10 "--no-wrap" []\T1/ptm/m/n/10 is used when called from [1909] Underfull \hbox (badness 1838) in paragraph at lines 4649--4655 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/it/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 4649--4655 \T1/ptm/m/n/10 `\T1/zi4/m/it/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [1910] [1911] [1912] Underfull \hbox (badness 2197) in paragraph at lines 4922--4932 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/it/10 available.packages[][][][]\T1/ptm/m/n/10 : [1913] Underfull \hbox (badness 1571) in paragraph at lines 4988--4992 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [1914] [1915] [1916] [1917]) (./utils-pkg.tex [1918] Chapter 14. Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/it/10 insertions[]\T1/ptm/m/n/10 ', [1919] [1920] [1921] [1922] [1923] [1924] [1925] [1926] [1927] [1928] [1929] Underfull \hbox (badness 10000) in paragraph at lines 729--735 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/it/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/it/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 729--735 []\T1/zi4/m/it/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [1930] [1931] Underfull \hbox (badness 3861) in paragraph at lines 934--939 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/it/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/it/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [1932] [1933] [1934] Underfull \hbox (badness 10000) in paragraph at lines 1136--1138 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [1935] [1936] [1937] Underfull \vbox (badness 10000) has occurred while \output is active [1938] [1939] [1940] [1941] [1942] Underfull \hbox (badness 1371) in paragraph at lines 1664--1666 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [1943] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 1734. [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] Underfull \hbox (badness 2057) in paragraph at lines 2384--2386 []\T1/ptm/m/n/10 None for []\T1/zi4/m/it/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [1953] Underfull \hbox (badness 2150) in paragraph at lines 2459--2466 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/it/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2459--2466 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [1954] [1955] [1956] [1957] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2736 ... the Clipboard in MS Windows}{clipboard} [1958] [1959] [1960] [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] [1970] [1971] [1972] [1973] [1974] [1975] [1976] Underfull \hbox (badness 6842) in paragraph at lines 4046--4051 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/it/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [1977] Underfull \hbox (badness 1430) in paragraph at lines 4109--4113 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/it/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [1978] Underfull \hbox (badness 1184) in paragraph at lines 4180--4196 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/it/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4180--4196 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/it/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4180--4196 \T1/ptm/m/n/10 able []\T1/zi4/m/it/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [1979] [1980] Underfull \hbox (badness 10000) in paragraph at lines 4330--4332 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/it/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [1981] [1982] [1983] [1984] [1985] [1986] [1987] [1988] [1989] [1990] [1991] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5101 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5101 ...mat Unordered and Ordered Lists}{format} [1992] [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \hbox (badness 1622) in paragraph at lines 5624--5628 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2000] [2001] [2002] [2003] [2004] Underfull \hbox (badness 1448) in paragraph at lines 6003--6008 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2005] [2006] [2007] [2008] [2009] [2010] [2011] [2012] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/it' instead on input line 6550. Underfull \hbox (badness 1371) in paragraph at lines 6554--6556 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/it/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 ccaddress []\T1/ptm/m/n/10 to pass to [2013] [2014] Underfull \hbox (badness 1502) in paragraph at lines 6643--6648 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6643--6648 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2015] [2016] Underfull \hbox (badness 10000) in paragraph at lines 6816--6825 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, [2017] Underfull \hbox (badness 2150) in paragraph at lines 6880--6883 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2018] [2019] Underfull \hbox (badness 3118) in paragraph at lines 7019--7021 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2020] [2021] Underfull \hbox (badness 1325) in paragraph at lines 7198--7202 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/it/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2022] Underfull \hbox (badness 1424) in paragraph at lines 7290--7293 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2023] Underfull \hbox (badness 3219) in paragraph at lines 7361--7368 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/i t/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7361--7368 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7361--7368 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7361--7368 [][][]\T1/zi4/m/it/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/it/10 type = "both" []\T1/ptm/m/n/10 will be silen tly Underfull \hbox (badness 2932) in paragraph at lines 7369--7372 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/it/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2024] [2025] Underfull \hbox (badness 1024) in paragraph at lines 7499--7502 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/it/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/it/10 , ] []\T1/ ptm/m/n/10 will Underfull \hbox (badness 10000) in paragraph at lines 7532--7537 [][][]\T1/zi4/m/it/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][] []\T1/ptm/m/n/10 , [2026] Underfull \hbox (badness 5133) in paragraph at lines 7591--7595 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] [2036] Underfull \hbox (badness 10000) in paragraph at lines 8252--8254 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/it/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2037] [2038] [2039] [2040] [2041] [2042] [2043] [2044] [2045] [2046] [2047] [2048] Underfull \hbox (badness 2310) in paragraph at lines 9016--9021 []\T1/ptm/m/n/10 If a `\T1/zi4/m/it/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2049] [2050] [2051] [2052] [2053] [2054] [2055] [2056] Underfull \hbox (badness 1248) in paragraph at lines 9582--9586 []\T1/zi4/m/it/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2057] Underfull \hbox (badness 1789) in paragraph at lines 9662--9664 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2058] [2059] [2060] [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] Underfull \hbox (badness 1097) in paragraph at lines 10514--10517 []\T1/ptm/m/n/10 The name []\T1/zi4/m/it/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2070] [2071] Underfull \hbox (badness 3000) in paragraph at lines 10650--10655 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 read.table[][][][]\T1/ptm/m/n/10 ; [2072] [2073] [2074] [2075] [2076] [2077] [2078] [2079] Underfull \hbox (badness 2134) in paragraph at lines 11244--11249 [][][]\T1/zi4/m/it/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ it/10 write.table[][][][]\T1/ptm/m/n/10 ; [2080] Underfull \hbox (badness 10000) in paragraph at lines 11300--11305 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11300--11305 []\T1/zi4/m/it/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/it/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 2469) in paragraph at lines 11798--11802 []\T1/ptm/m/n/10 Wikipedia con-trib-u-tors (2006). Ro-man nu-mer-als. Wikipedia , The Free En-cy-clo-pe-dia. Underfull \hbox (badness 3428) in paragraph at lines 11798--11802 [][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / w / index . php ? title = Roman _ numerals & oldid = 78252134$[][]\T1/ptm/m/n/10 . Ac- [2089] [2090] [2091] [2092] [2093] Underfull \hbox (badness 4060) in paragraph at lines 12225--12228 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/it/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/it/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able [2094] Overfull \hbox (18.77168pt too wide) in paragraph at lines 12248--12248 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2095] [2096] [2097] [2098] Underfull \hbox (badness 2150) in paragraph at lines 12503--12505 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / www . gnu . org / software / emac s / manual / [2099] [2100] [2101] Underfull \hbox (badness 10000) in paragraph at lines 12723--12727 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/it/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12756--12762 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a Underfull \hbox (badness 2762) in paragraph at lines 12771--12777 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2102] [2103] [2104] Underfull \hbox (badness 1009) in paragraph at lines 12946--12958 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If Underfull \hbox (badness 4779) in paragraph at lines 12986--12988 []\T1/ptm/m/n/10 The file `\T1/zi4/m/it/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/it/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and [2105] Underfull \hbox (badness 1077) in paragraph at lines 13016--13023 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2106] [2107] [2108] [2109] [2110] [2111] Underfull \hbox (badness 3780) in paragraph at lines 13438--13444 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/it/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via Underfull \hbox (badness 2635) in paragraph at lines 13456--13459 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/it/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2112] [2113] [2114] Underfull \hbox (badness 2302) in paragraph at lines 13661--13663 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2115] [2116] [2117] [2118] [2119] Underfull \hbox (badness 10000) in paragraph at lines 13960--13965 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/it/10 deparse[][][](control = ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 13969--13972 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2120] [2121] [2122] [2123] [2124] [2125] Underfull \hbox (badness 2932) in paragraph at lines 14402--14409 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14402--14409 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/it/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. Ob- [2126] [2127] Underfull \hbox (badness 1460) in paragraph at lines 14566--14574 \T1/ptm/m/n/10 drives can be in-cluded in filepaths). []\T1/zi4/m/it/10 Rtools []\T1/ptm/m/n/10 4 and ear-lier in-cluded a []\T1/zi4/m/it/10 tar []\T1/ptm/m/n /10 which used [2128] [2129] Underfull \hbox (badness 6510) in paragraph at lines 14716--14720 []\T1/ptm/m/n/10 When ar-gu-ment []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 is set to the com-mand []\T1/zi4/m/it/10 tar []\T1/ptm/m/n/10 on ma-cOS, en-vi-ron-men t vari-able Underfull \hbox (badness 10000) in paragraph at lines 14723--14726 [][][]$\T1/zi4/m/it/10 https : / / en . wikipedia . org / wiki / Tar _ (file _ format)$[][]\T1/ptm/m/n/10 , [][]$\T1/zi4/m/it/10 https : / / pubs . opengroup . org / Underfull \hbox (badness 2245) in paragraph at lines 14723--14726 \T1/zi4/m/it/10 onlinepubs / 9699919799 / utilities / pax . html # tag _ 20 _ 9 2 _ 13 _ 06$[][] \T1/ptm/m/n/10 for the way the POSIX [2130] [2131] [2132] [2133] [2134] [2135] [2136] [2137] [2138] [2139] Underfull \hbox (badness 10000) in paragraph at lines 15403--15408 []\T1/ptm/m/n/10 Arguments such as []\T1/zi4/m/it/10 destdir []\T1/ptm/m/n/10 a nd []\T1/zi4/m/it/10 dependencies []\T1/ptm/m/n/10 to be passed to Underfull \hbox (badness 3861) in paragraph at lines 15403--15408 [][][]\T1/zi4/m/it/10 install.packages[][][] []\T1/ptm/m/n/10 and []\T1/zi4/m/i t/10 ignore_repo_cache[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 max_repo_cache_age [ ]\T1/ptm/m/n/10 and Underfull \hbox (badness 1052) in paragraph at lines 15409--15411 []\T1/ptm/m/n/10 character, in-di-cat-ing the type of pack-age to down-load and in-stall. See Underfull \hbox (badness 10000) in paragraph at lines 15468--15471 [][][]\T1/zi4/m/it/10 install.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 download .packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 installed.packages[][][ ][]\T1/ptm/m/n/10 , [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] [2148] [2149] [2150] [2151] [2152] [2153] [2154] [2155]) [2156] [2157] [2158] (./KernSmooth-pkg.tex Chapter 15. [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168]) (./MASS-pkg.tex Chapter 16. [2169] [2170] [2171] [2172] [2173] [2174] [2175] [2176] [2177] [2178] [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] [2200] [2201] [2202] [2203] [2204] [2205] [2206] [2207] [2208] Underfull \hbox (badness 10000) in paragraph at lines 2877--2882 []\T1/zi4/m/it/10 "geometric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "log-normal"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "lognormal"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "logistic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "negative [2209] [2210] Underfull \hbox (badness 4686) in paragraph at lines 3049--3051 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2211] [2212] [2213] [2214] [2215] [2216] [2217] [2218] [2219] [2220] [2221] [2222] [2223] [2224] [2225] [2226] [2227] [2228] [2229] [2230] [2231] [2232] [2233] [2234] [2235] Underfull \hbox (badness 1117) in paragraph at lines 4829--4832 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2236] Underfull \hbox (badness 1117) in paragraph at lines 4908--4911 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2237] [2238] [2239] [2240] [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] [2253] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk}) has been already used, duplicate ignored \relax l.6175 ...sical N, P, K Factorial Experiment}{npk} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.npk.1}) h as been already used, duplicate ignored \relax l.6175 ...sical N, P, K Factorial Experiment}{npk} [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] [2262] [2263] [2264] [2265] [2266] Underfull \hbox (badness 1117) in paragraph at lines 7146--7153 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [2267] Underfull \hbox (badness 3138) in paragraph at lines 7217--7223 []\T1/ptm/m/n/10 The log-log and com-ple-men-tary log-log links are the in-crea s-ing func-tions $\OML/cmm/m/it/10 F[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p\OT1/c mr/m/n/10 ) = [2268] [2269] [2270] Underfull \hbox (badness 1910) in paragraph at lines 7396--7399 []\T1/ptm/m/n/10 the di-men-sion of the space to be used. If this is less than []\T1/zi4/m/it/10 min(p, [2271] [2272] [2273] [2274] [2275] [2276] [2277] [2278] [2279] Underfull \hbox (badness 4686) in paragraph at lines 8029--8031 []\T1/ptm/m/n/10 An early ter-mi-na-tion cri-te-rion. If any par-tial de-nom-i- na-tor ex-ceeds [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] [2288] [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] [2297] [2298] [2299] [2300] [2301] [2302] [2303] [2304] [2305] [2306] [2307] [2308] [2309] [2310] [2311] [2312] [2313] [2314] [2315] [2316]) (./Matrix-pkg.tex Chapter 17. Underfull \hbox (badness 10000) in paragraph at lines 35--38 []\T1/ptm/m/n/10 Note that the cur-rent im-ple-men-ta-tion de-tails are sub-jec t to change, and if you Underfull \hbox (badness 10000) in paragraph at lines 35--38 \T1/ptm/m/n/10 con-sider work-ing with these classes, please con-tact the pack- age main-tain-ers [2317] Underfull \hbox (badness 1769) in paragraph at lines 89--92 []\T1/ptm/m/n/10 This is cur-rently ex-per-i-men-tal and not yet used for our o wn code. Please con-tact us [2318] [2319] [2320] [2321] [2322] Underfull \hbox (badness 5119) in paragraph at lines 488--492 []\T1/ptm/m/n/10 logical; if true the re-sult will be sym-met-ric (in-her-it-in g from class [2323] Underfull \hbox (badness 2035) in paragraph at lines 584--587 []\T1/ptm/m/n/10 The value of []\T1/zi4/m/it/10 bdiag() []\T1/ptm/m/n/10 in-her -its from class [][][]\T1/zi4/m/it/10 CsparseMatrix[][][][]\T1/ptm/m/n/10 , whe reas []\T1/zi4/m/it/10 .bdiag() []\T1/ptm/m/n/10 re-turns a [2324] [2325] [2326] [2327] Underfull \hbox (badness 1521) in paragraph at lines 859--864 []\T1/ptm/m/n/10 option [][][]\T1/zi4/m/it/10 logical[][][] []\T1/ptm/m/n/10 in -di-cat-ing if the re-sult should be sparse, i.e., for-mally Underfull \hbox (badness 2790) in paragraph at lines 859--864 \T1/ptm/m/n/10 in-her-it-ing from []\T1/zi4/m/it/10 "[][]sparseMatrix[][][]"[]\ T1/ptm/m/n/10 . The de-fault, [][][]\T1/zi4/m/it/10 NA[][][][]\T1/ptm/m/n/10 , de-cides from the Underfull \hbox (badness 1189) in paragraph at lines 859--864 \T1/ptm/m/n/10 ``spar-sity'' of []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 and []\T1/ zi4/m/it/10 y[]\T1/ptm/m/n/10 , see e.g., the \T1/phv/m/n/10 R \T1/ptm/m/n/10 c ode in []\T1/zi4/m/it/10 selectMethod(cbind2, [2328] [2329] Underfull \hbox (badness 10000) in paragraph at lines 1029--1031 []\T1/zi4/m/it/10 signature(from = "CHMfactor", to = "sparseMatrix") []\T1/ptm/ m/n/10 (or equiv-a-lently, []\T1/zi4/m/it/10 to = [2330] [2331] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol}) ha s been already used, duplicate ignored \relax l.1141 ...- 'Matrix' S4 Generic and Methods}{chol} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.chol.1}) has been already used, duplicate ignored \relax l.1141 ...- 'Matrix' S4 Generic and Methods}{chol} [2332] [2333] [2334] Underfull \hbox (badness 2277) in paragraph at lines 1411--1414 []\T1/ptm/m/n/10 This is a generic func-tion with spe-cial meth-ods for dif-fer -ent types of ma-tri-ces. Use [2335] [2336] [2337] Underfull \hbox (badness 1097) in paragraph at lines 1581--1584 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "MatrixFactorization" []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 "dtrMatrix"[]\T1/ptm/m/n/10 , di-rectly. Class []\T1/zi4 /m/it/10 "dgeMatrix"[]\T1/ptm/m/n/10 , by class Underfull \hbox (badness 1783) in paragraph at lines 1587--1591 []\T1/ptm/m/n/10 Both these fac-tor-iza-tions can \T1/ptm/m/it/10 di-rectly \T1 /ptm/m/n/10 be treated as (tri-an-gu-lar) ma-tri-ces, as they ex-tend pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums}) has been already used, duplicate ignored \relax l.1644 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colSums.1 }) has been already used, duplicate ignored \relax l.1644 ... Row and Column Sums and Means}{colSums} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colMeans} ) has been already used, duplicate ignored \relax l.1645 \aliasA{colMeans}{colSums}{colMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowMeans} ) has been already used, duplicate ignored \relax l.1658 \aliasA{rowMeans}{colSums}{rowMeans} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rowSums}) has been already used, duplicate ignored \relax l.1665 \aliasA{rowSums}{colSums}{rowSums} [2338] [2339] [2340] [2341] Underfull \hbox (badness 3547) in paragraph at lines 1880--1883 []\T1/ptm/m/n/10 a num-ber $\OML/cmm/m/it/10 > \OT1/cmr/m/n/10 0$\T1/ptm/m/n/10 , the es-ti-mated (1-norm) con-di-tion num-ber $[]$; when [2342] [2343] [2344] [2345] Underfull \hbox (badness 1983) in paragraph at lines 2287--2295 []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unpackedMatrix[][][][]\T1/ptm/m/n/10 . Al-ter-na-tively into the (cur-rently) three sub-classes [][][]\T1/zi4/m/it/ 10 ddenseMatrix[][][][]\T1/ptm/m/n/10 , [2346] [2347] [2348] [2349] Underfull \hbox (badness 2717) in paragraph at lines 2613--2617 []\T1/ptm/m/n/10 However this means that a ma-trix typ-i-cally can be stored in more than one pos-si-ble [2350] [2351] Underfull \hbox (badness 3417) in paragraph at lines 2728--2730 []\T1/zi4/m/it/10 .sparseDiagonal() []\T1/ptm/m/n/10 ex-ists pri-mar-ily to lev er-age ef-fi-cient C-level meth-ods avail-able for [2352] Underfull \hbox (badness 8019) in paragraph at lines 2853--2855 []\T1/zi4/m/it/10 signature(x = "nMatrix")[]\T1/ptm/m/n/10 , se-man-ti-cally eq uiv-a-lent to \T1/ptm/b/n/10 base \T1/ptm/m/n/10 func-tion [][][]\T1/zi4/m/it/1 0 which[][][](x, Underfull \hbox (badness 10000) in paragraph at lines 2856--2860 []\T1/zi4/m/it/10 signature(x = "diagonalMatrix")[]\T1/ptm/m/n/10 : all these g roup meth-ods re-turn a [2353] [2354] [2355] [2356] Underfull \hbox (badness 1902) in paragraph at lines 3181--3183 [][][]\T1/zi4/m/it/10 drop0[][][](x, tol=1e-10) []\T1/ptm/m/n/10 is some-times prefer-able to (and more ef-fi-cient than) []\T1/zi4/m/it/10 zapsmall(x, [2357] Underfull \hbox (badness 2020) in paragraph at lines 3215--3218 []\T1/ptm/m/n/10 a typ-i-cally sparse ma-trix; in-ter-nally co-erced to ei-ther []\T1/zi4/m/it/10 "[][]dgCMatrix[][][]" []\T1/ptm/m/n/10 or [2358] [2359] Underfull \hbox (badness 4378) in paragraph at lines 3415--3424 []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 chol[][][]() []\T1/ptm/m/n/10 is typ- i-cally used, e.g., see []\T1/zi4/m/it/10 selectMethod("coerce", c(from="dsyMat rix", [2360] Underfull \hbox (badness 1354) in paragraph at lines 3483--3486 []\T1/ptm/m/n/10 a Ma-trix like []\T1/zi4/m/it/10 x []\T1/ptm/m/n/10 but with n o ex-plicit ze-ros, i.e., []\T1/zi4/m/it/10 !any(x@x == 0)[]\T1/ptm/m/n/10 , al -ways in-her-it-ing from [2361] [2362] [2363] [2364] [2365] Underfull \hbox (badness 4518) in paragraph at lines 3835--3838 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = Underfull \hbox (badness 3690) in paragraph at lines 3838--3841 []\T1/zi4/m/it/10 signature(x = "dspMatrix", type = "character")[]\T1/ptm/m/n/1 0 , or []\T1/zi4/m/it/10 x = "dsyMatrix" []\T1/ptm/m/n/10 or []\T1/zi4/m/it/10 type = [2366] Underfull \hbox (badness 2318) in paragraph at lines 3940--3944 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "dgCMatrix"[]\T1/ptm/m/n/10 , di-rectl y. Class []\T1/zi4/m/it/10 "triangularMatrix"[]\T1/ptm/m/n/10 , di-rectly. Clas s []\T1/zi4/m/it/10 "dMatrix"[]\T1/ptm/m/n/10 , [2367] [2368] Underfull \hbox (badness 3240) in paragraph at lines 4055--4059 []\T1/zi4/m/it/10 signature(x = "dtpMatrix", logarithm = "logical")[]\T1/ptm/m/ n/10 : the [][][]\T1/zi4/m/it/10 determinant[][][](x) [2369] [2370] [2371] [2372] [2373] [2374] Overfull \hbox (23.27168pt too wide) in paragraph at lines 4481--4481 []\T1/zi4/m/n/9 str(jgl009 <- ## https://math.nist.gov/MatrixMarket/data/Harwe ll-Boeing/counterx/counterx.html[] Overfull \hbox (8.27782pt too wide) in paragraph at lines 4488--4488 [] \T1/zi4/m/n/9 readHB(gzcon(url("https://www.cise.ufl.edu/research/sparse/RB /Boeing/msc00726.tar.gz"))))[] [2375] [2376] Underfull \hbox (badness 1087) in paragraph at lines 4663--4669 []\T1/ptm/m/n/10 a string whose first three char-ac-ters spec-ify the class of the re-sult. It [2377] Underfull \hbox (badness 3590) in paragraph at lines 4683--4688 []\T1/ptm/m/n/10 a string ([]\T1/zi4/m/it/10 "C"[]\T1/ptm/m/n/10 , []\T1/zi4/m/ it/10 "R"[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 "T"[]\T1/ptm/m/n/10 ) spec-i-f y-ing the stor-age of the re-sult as Underfull \hbox (badness 4660) in paragraph at lines 4701--4703 []\T1/ptm/m/n/10 a string, one of []\T1/zi4/m/it/10 "trace", "sumLog", "prod", "min", "max", "range", Underfull \hbox (badness 1609) in paragraph at lines 4748--4752 []\T1/zi4/m/it/10 .CR2T []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 .T2CR []\T1/ptm/ m/n/10 co-erce be-tween [][][]\T1/zi4/m/it/10 TsparseMatrix[][][] []\T1/ptm/m/n /10 and the union of [][][]\T1/zi4/m/it/10 CsparseMatrix[][][] []\T1/ptm/m/n/10 and [2378] [2379] [2380] Underfull \hbox (badness 1931) in paragraph at lines 4944--4946 []\T1/ptm/m/n/10 a string spec-i-fy-ing how the []\T1/zi4/m/it/10 zero.print [] \T1/ptm/m/n/10 codes should be aligned, see [2381] [2382] [2383] [2384] Underfull \hbox (badness 1005) in paragraph at lines 5247--5252 []\T1/ptm/m/n/10 color for the bor-der of each rect-an-gle. []\T1/zi4/m/it/10 N A []\T1/ptm/m/n/10 means no bor-der is drawn. Underfull \hbox (badness 1189) in paragraph at lines 5247--5252 \T1/ptm/m/n/10 When []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 as by de-fault, []\ T1/zi4/m/it/10 border.col <- if(lwd < .01) NA else NULL []\T1/ptm/m/n/10 is [2385] Underfull \hbox (badness 5862) in paragraph at lines 5266--5269 []\T1/ptm/m/n/10 All meth-ods cur-rently end up call-ing the method for the [][ ][]\T1/zi4/m/it/10 dgTMatrix[][][] []\T1/ptm/m/n/10 class. Use [2386] Overfull \hbox (42.75635pt too wide) in paragraph at lines 5315--5315 []\T1/zi4/m/n/9 image(USCounties, c(1,100), c(1,100), useAbs=FALSE, lwd=3, bor der.col = adjustcolor("skyblue", 1/2))[] [2387] Underfull \hbox (badness 3229) in paragraph at lines 5420--5429 []\T1/ptm/m/n/10 While ``row-indexing'' (of more than one row \T1/ptm/m/it/10 o r \T1/ptm/m/n/10 us-ing []\T1/zi4/m/it/10 drop=FALSE[]\T1/ptm/m/n/10 ) stays wi thin the Underfull \hbox (badness 10000) in paragraph at lines 5462--5464 []\T1/zi4/m/it/10 signature(x = "matrix", y = "indMatrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 3989) in paragraph at lines 5467--5470 []\T1/zi4/m/it/10 signature(from = "numeric", to = "indMatrix")[]\T1/ptm/m/n/10 : a user con-ve-nience, to al-low [2388] Underfull \hbox (badness 10000) in paragraph at lines 5477--5480 []\T1/zi4/m/it/10 signature(from = "indMatrix", to = "matrix")[]\T1/ptm/m/n/10 : co-er-cion to a tra-di-tional [2389] [2390] [2391] [2392] Overfull \hbox (26.39984pt too wide) in paragraph at lines 5872--5872 []\T1/zi4/m/it/10 isSymmetric(object, tol = 100 * .Machine$double.eps, tol1 = 8 * tol, checkDN = TRUE, ...)[] [2393] [2394] [2395] [2396] Underfull \vbox (badness 10000) has occurred while \output is active [2397] [2398] [2399] [2400] Underfull \hbox (badness 2478) in paragraph at lines 6478--6483 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ldenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 6486--6489 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2401] [2402] [2403] Underfull \hbox (badness 10000) in paragraph at lines 6720--6723 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2404] Underfull \hbox (badness 10000) in paragraph at lines 6781--6784 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2405] Underfull \hbox (badness 2050) in paragraph at lines 6880--6883 []\T1/zi4/m/it/10 lu() []\T1/ptm/m/n/10 is a generic func-tion with spe-cial me th-ods for dif-fer-ent types of ma-tri-ces. Use [2406] [2407] [2408] [2409] [2410] [2411] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.det}) has been already used, duplicate ignored \relax l.7305 \aliasA{det}{Matrix-class}{det} Underfull \hbox (badness 1527) in paragraph at lines 7396--7398 []\T1/zi4/m/it/10 signature(x = "Matrix")[]\T1/ptm/m/n/10 : sim-ply de-fined as []\T1/zi4/m/it/10 prod(dim(x)) []\T1/ptm/m/n/10 (and hence of mode Underfull \hbox (badness 4846) in paragraph at lines 7401--7404 []\T1/zi4/m/it/10 signature(object = "Matrix")[]\T1/ptm/m/n/10 : draws an [][][ ]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 of the ma-trix en-tries, us-ing Underfull \hbox (badness 10000) in paragraph at lines 7406--7409 [2412] pdfTeX warning (ext4): destination with the same identifier (name{Rfn..Rpcent.* .Rpcent.}) has been already used, duplicate ignored \relax l.7478 ...*\%}{matrix-products}{.Rpcent.*.Rpcent.} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.crossprod }) has been already used, duplicate ignored \relax l.7575 ...A{crossprod}{matrix-products}{crossprod} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.tcrosspro d}) has been already used, duplicate ignored \relax l.7676 ...tcrossprod}{matrix-products}{tcrossprod} [2413] [2414] Underfull \hbox (badness 10000) in paragraph at lines 7853--7858 []\T1/zi4/m/it/10 signature(x = "dtrMatrix", y = "matrix") []\T1/ptm/m/n/10 and other sig-na-tures (use Underfull \hbox (badness 5359) in paragraph at lines 7853--7858 []\T1/zi4/m/it/10 showMethods("%*%", class="dtrMatrix")[]\T1/ptm/m/n/10 ): ma-t rix mul-ti-pli-ca-tion. Mul-ti-pli-ca-tion Underfull \hbox (badness 10000) in paragraph at lines 7862--7864 []\T1/zi4/m/it/10 signature(x = "CsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an Underfull \hbox (badness 10000) in paragraph at lines 7864--7866 []\T1/zi4/m/it/10 signature(x = "TsparseMatrix", y = "missing") []\T1/ptm/m/n/1 0 re-turns []\T1/zi4/m/it/10 t(x) %*% x []\T1/ptm/m/n/10 as an [2415] [2416] Underfull \hbox (badness 1430) in paragraph at lines 8015--8020 []\T1/ptm/m/n/10 classes in-her-it-ing from []\T1/zi4/m/it/10 "MatrixFactorizat ion"[]\T1/ptm/m/n/10 , such as [][][]\T1/zi4/m/it/10 LU[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Cholesky[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 C HMfactor[][][][]\T1/ptm/m/n/10 , and [2417] [2418] Underfull \hbox (badness 10000) in paragraph at lines 8131--8133 []\T1/ptm/m/n/10 logical in-di-cat-ing if []\T1/zi4/m/it/10 X <- (X + t(X))/2 [ ]\T1/ptm/m/n/10 should be done, af-ter []\T1/zi4/m/it/10 X <- [2419] [2420] Underfull \vbox (badness 10000) has occurred while \output is active [2421] Underfull \hbox (badness 2478) in paragraph at lines 8329--8334 []\T1/ptm/m/n/10 Class []\T1/zi4/m/it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 , di-re ctly. Class []\T1/zi4/m/it/10 "lMatrix"[]\T1/ptm/m/n/10 , by class []\T1/zi4/m/ it/10 "ndenseMatrix"[]\T1/ptm/m/n/10 . Class Underfull \hbox (badness 10000) in paragraph at lines 8337--8340 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ); use, e.g., [2422] [2423] Underfull \hbox (badness 5924) in paragraph at lines 8517--8519 []\T1/ptm/m/n/10 fast sim-ple meth-ods [2424] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.norm}) ha s been already used, duplicate ignored \relax l.8557 \HeaderA{norm}{Matrix Norms}{norm} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.norm.1}) has been already used, duplicate ignored \relax l.8557 \HeaderA{norm}{Matrix Norms}{norm} [2425] [2426] [2427] Underfull \hbox (badness 10000) in paragraph at lines 8859--8862 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2428] Underfull \hbox (badness 10000) in paragraph at lines 8923--8926 []\T1/ptm/m/n/10 Currently, mainly [][][]\T1/zi4/m/it/10 t[][][]() []\T1/ptm/m/ n/10 and co-er-cion meth-ods (for [][][]\T1/zi4/m/it/10 as[][][](.)[]\T1/ptm/m/ n/10 ; use, e.g., [2429] [2430] Underfull \hbox (badness 4242) in paragraph at lines 9058--9061 [][][]\T1/zi4/m/it/10 pack[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 unp ack[][][][]\T1/ptm/m/n/10 ; its vir-tual "com-ple-ment" []\T1/zi4/m/it/10 "[][] unpackedMatrix[][][]"[]\T1/ptm/m/n/10 ; its proper sub-classes [2431] [2432] Underfull \hbox (badness 10000) in paragraph at lines 9137--9139 []\T1/zi4/m/it/10 signature(x = "matrix", y = "pMatrix") []\T1/ptm/m/n/10 and o ther sig-na-tures (use [2433] [2434] [2435] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr}) has been already used, duplicate ignored \relax l.9364 \aliasA{qr}{qr-methods}{qr} [2436] [2437] Underfull \hbox (badness 7186) in paragraph at lines 9531--9537 []\T1/ptm/m/n/10 for a dense ma-trix, this is the rank of [][][]\T1/zi4/m/it/10 qr[][][](x, tol, [2438] [2439] [2440] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.rcond}) h as been already used, duplicate ignored \relax l.9688 ... the Reciprocal Condition Number}{rcond} [2441] [2442] [2443] [2444] Underfull \hbox (badness 2351) in paragraph at lines 9997--10005 []\T1/ptm/m/n/10 The al-go-rithm first sam-ples ``en-coded'' $\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 i; j\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 s with-out re-place-ment, via one di-men-sional Underfull \hbox (badness 1509) in paragraph at lines 9997--10005 \T1/ptm/m/n/10 in-dices, if not []\T1/zi4/m/it/10 symmetric [][]sample.int[][][ ](nrow*ncol, nnz)[]\T1/ptm/m/n/10 , then---if []\T1/zi4/m/it/10 rand.x []\T1/pt m/m/n/10 is not []\T1/zi4/m/it/10 NULL[]\T1/ptm/m/n/10 --- [2445] [2446] [2447] [2448] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solve}) h as been already used, duplicate ignored \relax l.10265 \aliasA{solve}{solve-methods}{solve} [2449] [2450] Underfull \hbox (badness 4403) in paragraph at lines 10501--10504 []\T1/ptm/m/n/10 , and sim-i-lar []\T1/zi4/m/it/10 b[]\T1/ptm/m/n/10 , in-clud- ing []\T1/zi4/m/it/10 "missing"[]\T1/ptm/m/n/10 , and [2451] Underfull \hbox (badness 10000) in paragraph at lines 10572--10575 []\T1/ptm/m/n/10 Construct a sparse model or ``de-sign'' ma-trix, from a for-mu la and data frame Underfull \hbox (badness 10000) in paragraph at lines 10608--10611 []\T1/ptm/m/n/10 character string or []\T1/zi4/m/it/10 NULL []\T1/ptm/m/n/10 or (co-er-ca-ble to) Underfull \hbox (badness 10000) in paragraph at lines 10619--10623 []\T1/ptm/m/n/10 should fac-tors have un-used lev-els dropped? The de-fault for [2452] [2453] [2454] [2455] [2456] [2457] [2458] Underfull \vbox (badness 10000) has occurred while \output is active [2459] Underfull \hbox (badness 10000) in paragraph at lines 11191--11199 []\T1/zi4/m/it/10 (object = "sparseMatrix", uniqT=FALSE)[]\T1/ptm/m/n/10 : Re-t urns an ob-ject of S3 class Underfull \hbox (badness 1796) in paragraph at lines 11191--11199 []\T1/zi4/m/it/10 "sparseSummary" []\T1/ptm/m/n/10 which is ba-si-cally a [][][ ]\T1/zi4/m/it/10 data.frame[][][] []\T1/ptm/m/n/10 with columns []\T1/zi4/m/it/ 10 (i,j,x) []\T1/ptm/m/n/10 (or just Underfull \hbox (badness 10000) in paragraph at lines 11216--11224 []\T1/zi4/m/it/10 signature(from = "factor", to = "sparseMatrix")[]\T1/ptm/m/n/ 10 : Co-er-cion of a fac-tor to Underfull \hbox (badness 1112) in paragraph at lines 11216--11224 []\T1/zi4/m/it/10 "sparseMatrix" []\T1/ptm/m/n/10 pro-duces the ma-trix of in-d i-ca-tor \T1/ptm/b/n/10 rows \T1/ptm/m/n/10 stored as an ob-ject of class [2460] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.qr.Q}) ha s been already used, duplicate ignored \relax l.11282 \aliasA{qr.Q}{sparseQR-class}{qr.Q} [2461] [2462] Underfull \hbox (badness 5036) in paragraph at lines 11467--11469 []\T1/ptm/m/n/10 vector of the non zero en-tries; may be miss-ing in which case a [2463] [2464] Underfull \hbox (badness 2828) in paragraph at lines 11629--11632 []\T1/zi4/m/it/10 signature(x = "sparseVector", mode = "character") []\T1/ptm/m /n/10 co-erces sparse vec-tors to Underfull \hbox (badness 2486) in paragraph at lines 11651--11654 []\T1/zi4/m/it/10 signature(x = "sparseVector") []\T1/ptm/m/n/10 re-peat []\T1/ zi4/m/it/10 x[]\T1/ptm/m/n/10 , with the same ar-gu-ment list []\T1/zi4/m/it/10 (x, times, [2465] Underfull \vbox (badness 10000) has occurred while \output is active [2466] [2467] [2468] [2469] Underfull \hbox (badness 2057) in paragraph at lines 11999--12001 []\T1/ptm/m/n/10 These are generic func-tions with sev-eral meth-ods for dif-fe r-ent ma-trix classes, use e.g., [2470] [2471] Underfull \hbox (badness 10000) in paragraph at lines 12174--12179 []\T1/ptm/m/n/10 Note that all []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/it/10 spar seMatrix[][][](*, repr="T") []\T1/ptm/m/n/10 con-struc-tors for Underfull \hbox (badness 1831) in paragraph at lines 12180--12186 []\T1/ptm/m/n/10 For con-ve-nience, meth-ods for some op-er-a-tions such as []\ T1/zi4/m/it/10 %*% []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 crossprod []\T1/ptm/m /n/10 are de-fined [2472] Underfull \hbox (badness 1902) in paragraph at lines 12215--12219 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/it/10 new(.)[]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 spMatrix[][][] []\T1/ptm/m/n/10 or [][][]\T1/zi4/m/it/10 sparseMat rix[][][] []\T1/ptm/m/n/10 con-struc-tors for []\T1/zi4/m/it/10 "dgTMatrix" []\ T1/ptm/m/n/10 (and other [2473] [2474] [2475] [2476] [2477] [2478] [2479] [2480] Underfull \hbox (badness 6910) in paragraph at lines 12940--12942 []\T1/ptm/m/n/10 is cur-rently a sim-ple fall-back [2481] Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12987. Package hyperref Warning: Glyph not defined in PU encoding, (hyperref) removing `\Rpercent' on input line 12987. [2482] [2483] [2484]) (./boot-pkg.tex Chapter 18. [2485] [2486] [2487] [2488] [2489] [2490] [2491] [2492] [2493] [2494] Underfull \hbox (badness 1297) in paragraph at lines 799--809 []\T1/ptm/m/n/10 Where random-number gen-er-a-tion is done in the worker pro-ce sses, the de-fault be-haviour [2495] Underfull \hbox (badness 1881) in paragraph at lines 826--828 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2496] Underfull \vbox (badness 10000) has occurred while \output is active [2497] [2498] [2499] Underfull \hbox (badness 2150) in paragraph at lines 1105--1111 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est. The de-fa ult value is [2500] [2501] [2502] [2503] Underfull \hbox (badness 1571) in paragraph at lines 1445--1447 []\T1/ptm/m/n/10 Rawlings, J.O. (1988) \T1/ptm/m/it/10 Ap-plied Re-gres-sion An al-y-sis\T1/ptm/m/n/10 . Wadsworth and Brooks/Cole Statis- [2504] [2505] [2506] [2507] [2508] [2509] Underfull \hbox (badness 1005) in paragraph at lines 1800--1807 []\T1/ptm/m/n/10 The sim-u-la-tion type. Pos-si-ble types are []\T1/zi4/m/it/10 "ordinary" []\T1/ptm/m/n/10 (case re-sam-pling), [2510] [2511] Underfull \vbox (badness 10000) has occurred while \output is active [2512] Underfull \hbox (badness 7379) in paragraph at lines 2084--2086 []\T1/ptm/m/n/10 The length of time (in months) that the res-i-dent spent at Ch an-ning House. [2513] [2514] [2515] [2516] Underfull \hbox (badness 1565) in paragraph at lines 2338--2343 []\T1/ptm/m/n/10 The ob-served value of the statis-tic of in-ter-est on the ori g-i-nal data set [2517] Underfull \hbox (badness 1881) in paragraph at lines 2432--2434 []\T1/ptm/m/n/10 Davison, A.C., Hink-ley, D.V. and Schecht-man, E. (1986) Ef-fi -cient boot-strap sim-u-la-tion. [2518] [2519] Underfull \hbox (badness 2970) in paragraph at lines 2536--2540 []\T1/ptm/m/n/10 The un-bi-ased es-ti-ma-tor uses a mul-ti-plier of []\T1/zi4/m /it/10 n/((n-1)*(n-2)) []\T1/ptm/m/n/10 where []\T1/zi4/m/it/10 n []\T1/ptm/m/n /10 is the sam-ple Underfull \hbox (badness 2310) in paragraph at lines 2536--2540 \T1/ptm/m/n/10 size, if []\T1/zi4/m/it/10 unbiased []\T1/ptm/m/n/10 is []\T1/zi 4/m/it/10 FALSE []\T1/ptm/m/n/10 then a mul-ti-plier of []\T1/zi4/m/it/10 1/n [ ]\T1/ptm/m/n/10 is used. This is mul-ti-plied by [2520] [2521] [2522] [2523] [2524] [2525] [2526] [2527] [2528] [2529] [2530] [2531] [2532] [2533] [2534] [2535] [2536] [2537] [2538] [2539] [2540] [2541] [2542] [2543] [2544] [2545] [2546] [2547] [2548] [2549] [2550] [2551] [2552] [2553] Underfull \hbox (badness 3000) in paragraph at lines 4959--4962 []\T1/ptm/m/n/10 The in-dex of the statis-tic of in-ter-est within the out-put of a call to [2554] [2555] [2556] [2557] Underfull \hbox (badness 2293) in paragraph at lines 5238--5241 []\T1/ptm/m/n/10 An in-te-ger giv-ing the num-ber of classes to be used in the boot-strap Underfull \hbox (badness 1668) in paragraph at lines 5238--5241 \T1/ptm/m/n/10 his-togram. The de-fault is the in-te-ger be-tween 10 and 100 cl os-est to [2558] [2559] [2560] [2561] [2562] [2563] [2564] [2565] [2566] [2567] [2568] Underfull \hbox (badness 4954) in paragraph at lines 6021--6024 []\T1/ptm/m/n/10 The re-turned value is an ob-ject of class []\T1/zi4/m/it/10 " saddle.distn"[]\T1/ptm/m/n/10 . See the help file for [2569] [2570] [2571] [2572] [2573] [2574] [2575] [2576] [2577] Underfull \hbox (badness 1596) in paragraph at lines 6742--6746 []\T1/ptm/m/n/10 A char-ac-ter string in-di-cat-ing the type of sec-ond ar-gu-m ent ex-pected by [2578] [2579] [2580] [2581] [2582] [2583] [2584] [2585] [2586] [2587]) (./class-pkg.tex [2588] Chapter 19. [2589] [2590] [2591] [2592] [2593] [2594] [2595] [2596] [2597] [2598] [2599] [2600] [2601] [2602] [2603] [2604]) (./cluster-pkg.tex Chapter 20. [2605] [2606] [2607] [2608] [2609] [2610] [2611] [2612] [2613] [2614] Underfull \hbox (badness 4144) in paragraph at lines 691--694 []\T1/ptm/m/n/10 Setting this to []\T1/zi4/m/it/10 FALSE []\T1/ptm/m/n/10 saves mem-ory (and hence time), but dis-ables [2615] [2616] Underfull \hbox (badness 1412) in paragraph at lines 783--788 []\T1/ptm/m/n/10 Kaufman and Rousseeuw (see [][][]\T1/zi4/m/it/10 agnes[][][][] \T1/ptm/m/n/10 ), orig-i-nally. Met-ric []\T1/zi4/m/it/10 "jaccard"[]\T1/ptm/m/ n/10 : Kamil Ko-zlowski [2617] Underfull \hbox (badness 10000) in paragraph at lines 881--883 []\T1/ptm/m/n/10 list with sil-hou-ette width in-for-ma-tion for the best sam-p le, see [2618] [2619] Underfull \hbox (badness 10000) in paragraph at lines 992--994 []\T1/ptm/m/n/10 simply cor-re-sponds to the global max-i-mum, i.e., is Underfull \hbox (badness 1342) in paragraph at lines 1006--1010 []\T1/ptm/m/n/10 This, the de-fault, has been pro-posed by Mar-tin Maech-ler in 2012, [2620] [2621] [2622] [2623] [2624] [2625] Underfull \hbox (badness 10000) in paragraph at lines 1477--1480 [2626] [2627] Underfull \hbox (badness 2503) in paragraph at lines 1589--1592 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "hclust" []\T1/ptm/m/n/1 0 or []\T1/zi4/m/it/10 "twins"[]\T1/ptm/m/n/10 , i.e., typ-i-cally the re-sult of [2628] Underfull \hbox (badness 4954) in paragraph at lines 1686--1688 []\T1/ptm/b/n/10 A\T1/ptm/m/n/10 symmetric bi-nary vari-able, aka []\T1/zi4/m/i t/10 "A" []\T1/ptm/m/n/10 in re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2629] Underfull \hbox (badness 7667) in paragraph at lines 1699--1703 []\T1/ptm/b/n/10 I\T1/ptm/m/n/10 nterval scaled -- the \T1/ptm/b/n/10 de-fault \T1/ptm/m/n/10 for all nu-meric Underfull \hbox (badness 10000) in paragraph at lines 1699--1703 \T1/ptm/m/n/10 (incl []\T1/zi4/m/it/10 integer[]\T1/ptm/m/n/10 ) columns of []\ T1/zi4/m/it/10 x[]\T1/ptm/m/n/10 , aka []\T1/zi4/m/it/10 "I" []\T1/ptm/m/n/10 i n re-sult []\T1/zi4/m/it/10 Types[]\T1/ptm/m/n/10 , see [2630] [2631] [2632] [2633] [2634] [2635] Underfull \hbox (badness 10000) in paragraph at lines 2207--2210 [2636] Underfull \hbox (badness 10000) in paragraph at lines 2221--2227 [][][]\T1/zi4/m/it/10 predict.ellipsoid[][][] []\T1/ptm/m/n/10 which is also th e [][][]\T1/zi4/m/it/10 predict[][][] []\T1/ptm/m/n/10 method for []\T1/zi4/m/i t/10 ellipsoid []\T1/ptm/m/n/10 ob-jects. [2637] [2638] [2639] Underfull \hbox (badness 6675) in paragraph at lines 2456--2458 []\T1/ptm/m/n/10 list with sil-hou-ette in-for-ma-tion of the near-est crisp cl us-ter-ing, see [2640] [2641] [2642] [2643] [2644] [2645] [2646] [2647] Underfull \hbox (badness 2980) in paragraph at lines 3051--3055 [][][]\T1/zi4/m/it/10 agnes[][][] []\T1/ptm/m/n/10 for back-ground and ref-er-e nces; [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clara[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 daisy[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [2648] [2649] [2650] [2651] [2652] [2653] Underfull \hbox (badness 1142) in paragraph at lines 3392--3395 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2654] [2655] Underfull \hbox (badness 1142) in paragraph at lines 3511--3514 []\T1/ptm/m/n/10 graphical pa-ram-e-ters (see [][][]\T1/zi4/m/it/10 par[][][][] \T1/ptm/m/n/10 ) may also be sup-plied and are passed to [2656] [2657] [2658] Underfull \hbox (badness 2582) in paragraph at lines 3734--3739 [][][]\T1/zi4/m/it/10 partition.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 clusplot.partition[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 clusplot .default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pam[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 pam.object[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 clara[][][][]\T1/ptm/m/n/10 , [2659] Underfull \hbox (badness 2698) in paragraph at lines 3796--3801 []\T1/ptm/m/n/10 Note that cur-rently the method func-tion sim-ply calls []\T1/ zi4/m/it/10 plot([][]as.hclust[][][](x), ...)[]\T1/ptm/m/n/10 , which Underfull \hbox (badness 4792) in paragraph at lines 3796--3801 \T1/ptm/m/n/10 dis-patches to [][][]\T1/zi4/m/it/10 plot.hclust[][][](..)[]\T1/ ptm/m/n/10 . If more flex-i-ble plots are needed, con-sider []\T1/zi4/m/it/10 x x <- [2660] [2661] [2662] [2663] [2664] Underfull \hbox (badness 10000) in paragraph at lines 4088--4090 []\T1/ptm/m/n/10 a []\T1/zi4/m/it/10 dissimilarity []\T1/ptm/m/n/10 ob-ject or a []\T1/zi4/m/it/10 summary.dissimilarity []\T1/ptm/m/n/10 one for [2665] [2666] [2667] [2668] Underfull \hbox (badness 2626) in paragraph at lines 4317--4322 []\T1/ptm/m/n/10 arguments passed [][][]\T1/zi4/m/it/10 barplot[][][]()[]\T1/pt m/m/n/10 ; note that the de-fault used to be []\T1/zi4/m/it/10 col = [2669] Underfull \hbox (badness 1383) in paragraph at lines 4395--4400 []\T1/ptm/m/n/10 While []\T1/zi4/m/it/10 silhouette() []\T1/ptm/m/n/10 is \T1/p tm/m/it/10 in-trin-sic \T1/ptm/m/n/10 to the [][][]\T1/zi4/m/it/10 partition[][ ][] []\T1/ptm/m/n/10 clus-ter-ings, and hence has a (triv-ial) [2670] [2671] [2672] [2673] [2674] [2675] [2676] Underfull \hbox (badness 10000) in paragraph at lines 4839--4841 []\T1/ptm/m/n/10 Sample data set ac-com-pa-ny-ing the ref-er-ence be-low (file `\T1/zi4/m/it/10 xclara.dat\T1/ptm/m/n/10 ' in side [2677] [2678]) (./codetools-pkg.tex Chapter 21. [2679] [2680] [2681] [2682] [2683]) (./foreign-pkg.tex [2684] Chapter 22. Underfull \hbox (badness 10000) in paragraph at lines 33--37 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able as [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 33--37 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2685] Underfull \hbox (badness 10000) in paragraph at lines 78--80 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2686] [2687] [2688] [2689] [2690] [2691] [2692] Underfull \hbox (badness 2846) in paragraph at lines 505--514 []\T1/ptm/m/n/10 character: what to do with du-pli-cated value la-bels for dif- fer-ent lev- Underfull \hbox (badness 5417) in paragraph at lines 505--514 \T1/ptm/m/n/10 els. For []\T1/zi4/m/it/10 "append" []\T1/ptm/m/n/10 (the de-fau lt), the first orig-i-nal value la-bel is Underfull \hbox (badness 6001) in paragraph at lines 505--514 \T1/ptm/m/n/10 kept while fur-ther du-pli-cated la-bels are re-named to []\T1/z i4/m/it/10 paste0(label, [2693] Overfull \hbox (6.73795pt too wide) in paragraph at lines 623--623 []\T1/zi4/m/n/9 ### Expect lots of warnings as value labels (corresponding to R factor labels) are uncomplete,[] [2694] [2695] [2696] Underfull \hbox (badness 10000) in paragraph at lines 811--812 [2697] Underfull \hbox (badness 10000) in paragraph at lines 868--872 []\T1/ptm/m/n/10 SAS Tech-ni-cal Sup-port doc-u-ment TS-140: ``The Record Lay-o ut of Underfull \hbox (badness 10000) in paragraph at lines 868--872 \T1/ptm/m/n/10 a Data Set in SAS Trans-port (XPORT) For-mat'' avail-able at [][ ]$\T1/zi4/m/it/10 https : Underfull \hbox (badness 10000) in paragraph at lines 868--872 \T1/zi4/m/it/10 / / support . sas . com / content / dam / SAS / support / en / technical-[]papers / Underfull \hbox (badness 10000) in paragraph at lines 868--872 \T1/zi4/m/it/10 record-[]layout-[]of-[]a-[]sas-[]version-[]5-[]or-[]6-[]data-[] set-[]in-[]sas-[]transport-[]xport-[]format . [2698] [2699] Underfull \hbox (badness 10000) in paragraph at lines 989--991 []\T1/ptm/m/n/10 Attribute-Relation File For-mat [][]$\T1/zi4/m/it/10 https : / / waikato . github . io / weka-[]wiki / formats _ and _ [2700] [2701] [2702] [2703] Underfull \hbox (badness 10000) in paragraph at lines 1268--1274 []\T1/ptm/m/n/10 The work for this func-tion is done by []\T1/zi4/m/it/10 forei gn:::writeForeignStata[]\T1/ptm/m/n/10 , [2704] [2705]) (./lattice-pkg.tex [2706] Chapter 23. [2707] Underfull \hbox (badness 1484) in paragraph at lines 117--121 []\T1/ptm/m/n/10 Bell Lab's Trel-lis Page con-tains sev-eral doc-u-ments out-li n-ing the use of Trel-lis graph-ics; Underfull \hbox (badness 10000) in paragraph at lines 117--121 \T1/zi4/m/it/10 20081020164041 / http : / / cm . bell-[]labs . com / cm / ms / departments / sia / project / trellis / [2708] [2709] [2710] [2711] [2712] [2713] [2714] [2715] [2716] [2717] [2718] [2719] [2720] [2721] [2722] Underfull \hbox (badness 1062) in paragraph at lines 1402--1406 \T1/ptm/m/n/10 no-ta-tion for the x and y axes re-spec-tively. See doc-u-men-ta -tion for [2723] [2724] [2725] Underfull \hbox (badness 1803) in paragraph at lines 1570--1587 [][][]\T1/zi4/m/it/10 Lattice[][][] []\T1/ptm/m/n/10 for an overview of the pac k-age, as well as [][][]\T1/zi4/m/it/10 barchart.table[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.trellis[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 1570--1587 [][][]\T1/zi4/m/it/10 panel.stripplot[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 panel.superpose[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.loess[ ][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 panel.average[][][][]\T1/ptm/m/n/ 10 , [][][]\T1/zi4/m/it/10 strip.default[][][][]\T1/ptm/m/n/10 , [2726] [2727] Underfull \hbox (badness 3009) in paragraph at lines 1712--1714 []\T1/ptm/m/n/10 additional ar-gu-ments passed to [][][]\T1/zi4/m/it/10 xyplot[ ][][][]\T1/ptm/m/n/10 , which may pass them on to Underfull \hbox (badness 6808) in paragraph at lines 1742--1746 []\T1/ptm/m/n/10 graphical ar-gu-ments, which are pro-cessed and even-tu-ally p assed to [2728] [2729] [2730] [2731] [2732] Underfull \hbox (badness 10000) in paragraph at lines 2128--2131 []\T1/ptm/m/n/10 When []\T1/zi4/m/it/10 breaks []\T1/ptm/m/n/10 is un-spec-i-fi ed, the value of [2733] [2734] [2735] [2736] [2737] [2738] [2739] [2740] [2741] [2742] Underfull \hbox (badness 2781) in paragraph at lines 2836--2838 []\T1/ptm/m/n/10 A color ramp spec-i-fi-ca-tion, as in the []\T1/zi4/m/it/10 co l.regions []\T1/ptm/m/n/10 ar-gu-ment in [2743] [2744] Underfull \hbox (badness 2486) in paragraph at lines 2988--2992 []\T1/ptm/m/n/10 Other use-ful ar-gu-ments are men-tioned in the help page for the de-fault panel func-tion [2745] [2746] [2747] [2748] [2749] [2750] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.parallel} ) has been already used, duplicate ignored \relax l.3462 \aliasA{parallel}{B\_08\_splom}{parallel} [2751] [2752] [2753] [2754] [2755] [2756] [2757] Underfull \hbox (badness 5696) in paragraph at lines 3949--3953 []\T1/ptm/m/n/10 A pos-si-ble use of this ar-gu-ment is to change the de-fault set-tings Underfull \hbox (badness 10000) in paragraph at lines 3949--3953 \T1/ptm/m/n/10 by spec-i-fy-ing []\T1/zi4/m/it/10 lattice.options(default.theme = "col.whitebg")[]\T1/ptm/m/n/10 . Underfull \hbox (badness 2435) in paragraph at lines 3949--3953 \T1/ptm/m/n/10 For back-compatibility, this is ini-tially (when lat-tice is loa ded) set to [2758] [2759] [2760] [2761] Underfull \hbox (badness 1173) in paragraph at lines 4208--4212 []\T1/ptm/m/n/10 A char-ac-ter string giv-ing the name of a com-po-nent. If un- spec-i-fied in Underfull \hbox (badness 3219) in paragraph at lines 4235--4237 []\T1/ptm/m/n/10 A log-i-cal flag, in-di-cat-ing whether a warn-ing should be i s-sued when [2762] [2763] [2764] Underfull \hbox (badness 3492) in paragraph at lines 4435--4445 []\T1/ptm/m/n/10 A color spec-i-fi-ca-tion. []\T1/zi4/m/it/10 col []\T1/ptm/m/n /10 is used for com-po-nents []\T1/zi4/m/it/10 "plot.symbol"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4460--4463 []\T1/ptm/m/n/10 fill color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 p lot.symbol[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 plot.polygon[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 4463--4465 []\T1/ptm/m/n/10 border color, ap-pli-ca-ble for com-po-nents []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 and [2765] [2766] [2767] [2768] [2769] [2770] [2771] Underfull \vbox (badness 10000) has occurred while \output is active [2772] [2773] [2774] Underfull \hbox (badness 6157) in paragraph at lines 5201--5204 []\T1/zi4/m/it/10 plot.shingle []\T1/ptm/m/n/10 dis-plays the ranges of shin-gl es via rect-an-gles. []\T1/zi4/m/it/10 print.shingle []\T1/ptm/m/n/10 and [2775] [2776] [2777] [2778] [2779] [2780] [2781] Underfull \hbox (badness 10000) in paragraph at lines 5659--5662 []\T1/ptm/m/n/10 logical, spec-i-fy-ing whether the la-bels etc should be hor-i -zon-tal. Underfull \hbox (badness 5592) in paragraph at lines 5659--5662 []\T1/zi4/m/it/10 horizontal=FALSE []\T1/ptm/m/n/10 is use-ful for strips on th e left of pan-els us-ing [2782] [2783] [2784] [2785] Underfull \hbox (badness 4805) in paragraph at lines 6021--6025 []\T1/ptm/m/n/10 logical, whether the view-port be-ing as-signed fo-cus should be high- Underfull \hbox (badness 10000) in paragraph at lines 6032--6039 []\T1/ptm/m/n/10 For []\T1/zi4/m/it/10 panel.identify.qqmath[]\T1/ptm/m/n/10 , ex-tra pa-ram-e-ters are passed on to Underfull \hbox (badness 1226) in paragraph at lines 6032--6039 []\T1/zi4/m/it/10 panel.identify[]\T1/ptm/m/n/10 . For []\T1/zi4/m/it/10 panel. identify[]\T1/ptm/m/n/10 , ex-tra ar-gu-ments are treated as Underfull \hbox (badness 2418) in paragraph at lines 6032--6039 \T1/ptm/m/n/10 graph-i-cal pa-ram-e-ters and are used for la-belling. For []\T1 /zi4/m/it/10 trellis.focus Underfull \hbox (badness 10000) in paragraph at lines 6032--6039 []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 trellis.switchFocus[]\T1/ptm/m/n/10 , th ese are used (in com-bi-na-tion with Underfull \hbox (badness 1259) in paragraph at lines 6032--6039 [][][]\T1/zi4/m/it/10 lattice.options[][][][]\T1/ptm/m/n/10 ) for high-light-in g the cho-sen view-port if so re-quested. [2786] [2787] [2788] Underfull \vbox (badness 10000) has occurred while \output is active [2789] Underfull \hbox (badness 4242) in paragraph at lines 6332--6337 []\T1/ptm/m/n/10 Graphical pa-ram-e-ters for the bars. By de-fault, the trel-li s pa-ram-e- Underfull \hbox (badness 2529) in paragraph at lines 6332--6337 \T1/ptm/m/n/10 ter []\T1/zi4/m/it/10 plot.polygon []\T1/ptm/m/n/10 is used if t here is no group-ing vari-able, oth-er-wise [2790] [2791] Underfull \hbox (badness 2310) in paragraph at lines 6448--6453 []\T1/ptm/m/n/10 Creates Box and Whisker plot of []\T1/zi4/m/it/10 x []\T1/ptm/ m/n/10 for ev-ery level of []\T1/zi4/m/it/10 y []\T1/ptm/m/n/10 (or the other w ay round if [2792] [2793] [2794] [2795] [2796] [2797] [2798] [2799] [2800] [2801] [2802] [2803] Underfull \hbox (badness 3168) in paragraph at lines 7309--7313 []\T1/ptm/m/n/10 to know what ar-gu-ments this func-tion is passed when called. Use [2804] [2805] [2806] [2807] Underfull \hbox (badness 2012) in paragraph at lines 7580--7583 []\T1/ptm/m/n/10 Further ar-gu-ments, of-ten graph-i-cal pa-ram-e-ters, even-tu -ally passed on to [2808] [2809] [2810] Underfull \hbox (badness 3333) in paragraph at lines 7787--7789 []\T1/ptm/m/n/10 default colours are ob-tained from []\T1/zi4/m/it/10 plot.symb ol []\T1/ptm/m/n/10 and []\T1/zi4/m/it/10 plot.line []\T1/ptm/m/n/10 us-ing Underfull \hbox (badness 2318) in paragraph at lines 7815--7823 []\T1/zi4/m/it/10 "spline" []\T1/ptm/m/n/10 adds a cu-bic smooth-ing spline fit (same as [][][]\T1/zi4/m/it/10 panel.spline[][][][]\T1/ptm/m/n/10 ). [2811] [2812] [2813] Underfull \vbox (badness 10000) has occurred while \output is active [2814] [2815] [2816] Underfull \hbox (badness 1436) in paragraph at lines 8225--8231 []\T1/ptm/m/n/10 A log-i-cal flag de-ter-min-ing whether the de-fault graph-i-c al pa-ram-e-ters for [2817] [2818] [2819] [2820] [2821] [2822] [2823] [2824] Underfull \hbox (badness 10000) in paragraph at lines 8794--8797 []\T1/ptm/m/n/10 Extra ar-gu-ments. Passed down to []\T1/zi4/m/it/10 panel.supe rpose []\T1/ptm/m/n/10 from [2825] Underfull \hbox (badness 1092) in paragraph at lines 8840--8842 []\T1/ptm/m/n/10 Deepayan Sarkar \T1/zi4/m/it/10 \T1/ptm/m/n/10 ([]\T1/zi4/m/it/10 panel.superpose.2 []\T1/ptm/m/n/10 orig-i-n ally con- [2826] [2827] Underfull \hbox (badness 3895) in paragraph at lines 9001--9004 []\T1/ptm/m/n/10 details of his-togram cal-cu-la-tions. []\T1/zi4/m/it/10 type []\T1/ptm/m/n/10 has a dif-fer-ent mean-ing in [2828] Underfull \hbox (badness 1515) in paragraph at lines 9077--9081 []\T1/ptm/m/n/10 numeric vec-tor of length two, rep-re-sent-ing prob-a-bil-i-ti es. If used with [2829] [2830] Underfull \hbox (badness 6316) in paragraph at lines 9183--9188 []\T1/ptm/m/n/10 which packet (counted ac-cord-ing to the packet or-der, de-scr ibed in Underfull \hbox (badness 5908) in paragraph at lines 9200--9203 []\T1/ptm/m/n/10 list, sim-i-lar to those pro-duced by []\T1/zi4/m/it/10 xscale .components.default []\T1/ptm/m/n/10 and [2831] [2832] [2833] [2834] Underfull \hbox (badness 2418) in paragraph at lines 9491--9495 []\T1/ptm/m/n/10 returns a list with sev-eral com-po-nents, in-clud-ing []\T1/z i4/m/it/10 left, right, left.name, right.name, [2835] [2836] [2837] [2838] [2839] [2840] [2841] Underfull \hbox (badness 2310) in paragraph at lines 9955--9959 []\T1/ptm/m/n/10 Factor with lev-els []\T1/zi4/m/it/10 "Svansota"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/it/10 "No. 462"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Manchuria "[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "No. 475"[]\T1/ptm/m/n/10 , []\T1/zi4/m/i t/10 "Velvet"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3701) in paragraph at lines 9960--9963 []\T1/ptm/m/n/10 Factor with 6 lev-els: []\T1/zi4/m/it/10 "Grand Rapids"[]\T1/p tm/m/n/10 , []\T1/zi4/m/it/10 "Duluth"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Uni versity Farm"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Morris"[]\T1/ptm/m/n/10 , [2842] [2843] [2844] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.melanoma} ) has been already used, duplicate ignored \relax l.10186 \aliasA{melanoma}{H\_melanoma}{melanoma} [2845] [2846] [2847] Underfull \hbox (badness 4144) in paragraph at lines 10410--10413 []\T1/ptm/m/n/10 Rural Health Re-form Pol-icy Re-search Cen-ter. _Ex-plor-ing R u-ral and Ur-ban Mor-tal- Underfull \hbox (badness 1509) in paragraph at lines 10410--10413 \T1/ptm/m/n/10 ity Dif-fer-ences_, Au-gust 2015 Bethesda, MD. [][]$\T1/zi4/m/it /10 https : / / ruralhealth . und . edu / projects / [2848] [2849]) (./mgcv-pkg.tex [2850] Chapter 24. [2851] [2852] [2853] Underfull \hbox (badness 1142) in paragraph at lines 184--188 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from Underfull \hbox (badness 1043) in paragraph at lines 209--214 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2854] [2855] [2856] [2857] Underfull \hbox (badness 10000) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 mgcv.parallel[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 mgcv-package[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gamObject[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 , [][][ ]\T1/zi4/m/it/10 smooth.terms[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 7168) in paragraph at lines 379--386 [][][]\T1/zi4/m/it/10 linear.functional.terms[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][] [][]predi ct.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.gam[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 summary.gam[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/ m/it/10 gam.side[][][][]\T1/ptm/m/n/10 , [2858] [2859] [2860] [2861] [2862] [2863] Underfull \hbox (badness 1406) in paragraph at lines 704--705 []\T1/ptm/m/n/10 The MKL BLAS is mut-lithreaded by de-fault. Un-der linux set-t ing en-vi-ron-ment vari-able [2864] [2865] Underfull \hbox (badness 1158) in paragraph at lines 814--816 []\T1/ptm/m/n/10 Choosing the ba-sis di-men-sion, and check-ing the choice, whe n us-ing pe-nal-ized re-gres-sion [2866] Underfull \hbox (badness 1259) in paragraph at lines 877--878 []\T1/ptm/m/n/10 Wood, S.N. (2017) Gen-er-al-ized Ad-di-tive Mod-els: An In-tro -duc-tion with R (2nd edi-tion). [2867] Underfull \vbox (badness 10000) has occurred while \output is active [2868] [2869] [2870] [2871] [2872] [2873] Underfull \hbox (badness 1281) in paragraph at lines 1272--1273 []\T1/zi4/m/it/10 deviance[]\T1/ptm/m/n/10 ,[]\T1/zi4/m/it/10 martingale[]\T1/p tm/m/n/10 ,[]\T1/zi4/m/it/10 score[]\T1/ptm/m/n/10 , or []\T1/zi4/m/it/10 schoe nfeld []\T1/ptm/m/n/10 resid-u-als can be ex-tracted. See Klein amd [2874] [2875] Underfull \vbox (badness 10000) has occurred while \output is active [2876] Underfull \vbox (badness 10000) has occurred while \output is active [2877] [2878] Underfull \vbox (badness 10000) has occurred while \output is active [2879] [2880] [2881] [2882] [2883] [2884] [2885] [2886] [2887] [2888] [2889] [2890] [2891] [2892] [2893] [2894] [2895] [2896] Underfull \hbox (badness 1142) in paragraph at lines 2594--2598 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2897] Underfull \hbox (badness 1043) in paragraph at lines 2620--2626 \T1/ptm/m/n/10 un-known scale pa-ram-e-ter and Mal-lows' Cp/UBRE/AIC for known scale. [2898] [2899] [2900] [2901] [2902] [2903] Underfull \vbox (badness 10000) has occurred while \output is active [2904] Underfull \vbox (badness 10000) has occurred while \output is active [2905] [2906] [2907] [2908] [2909] [2910] [2911] [2912] [2913] [2914] [2915] [2916] [2917] [2918] [2919] [2920] [2921] Underfull \hbox (badness 10000) in paragraph at lines 4065--4069 []\T1/ptm/m/n/10 Random ef-fects can be added to []\T1/zi4/m/it/10 gam []\T1/pt m/m/n/10 mod-els us-ing []\T1/zi4/m/it/10 s(...,bs="re") []\T1/ptm/m/n/10 terms (see [2922] [2923] Underfull \vbox (badness 10000) has occurred while \output is active [2924] [2925] [2926] Underfull \hbox (badness 1184) in paragraph at lines 4352--4356 []\T1/ptm/m/n/10 list of the square root penal-ties: last en-try is root of fix ed penalty, if [2927] [2928] [2929] [2930] [2931] [2932] [2933] [2934] [2935] [2936] [2937] [2938] Underfull \hbox (badness 1142) in paragraph at lines 5075--5079 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2939] Underfull \hbox (badness 1231) in paragraph at lines 5179--5181 []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 per-forms poorly with bi-nary data, sin ce it uses PQL. It is bet-ter to use []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 wit h [2940] [2941] [2942] Underfull \vbox (badness 10000) has occurred while \output is active [2943] [2944] [2945] [2946] Underfull \hbox (badness 2181) in paragraph at lines 5621--5622 []\T1/ptm/m/n/10 one sided for-mula con-tain-ing vari-ables needed for pre-dic- tion, used by [2947] [2948] [2949] [2950] [2951] [2952] [2953] Underfull \hbox (badness 10000) in paragraph at lines 6009--6010 []\T1/ptm/m/n/10 A pre-fit gam ob-ject, as pro-duced by []\T1/zi4/m/it/10 gam(. ..,fit=FALSE) []\T1/ptm/m/n/10 or [2954] [2955] [2956] [2957] [2958] [2959] [2960] [2961] [2962] [2963] [2964] Underfull \hbox (badness 1142) in paragraph at lines 6594--6598 \T1/ptm/m/n/10 ates re-quired by the for-mula. By de-fault the vari-ables are t aken from [2965] [2966] [2967] Underfull \vbox (badness 10000) has occurred while \output is active [2968] [2969] [2970] [2971] Underfull \hbox (badness 1087) in paragraph at lines 6966--6967 []\T1/ptm/m/n/10 If []\T1/zi4/m/it/10 rho []\T1/ptm/m/n/10 and []\T1/zi4/m/it/1 0 theta []\T1/ptm/m/n/10 were sup-plied then deriva-tives are w.r.t. these. In this case, and if [2972] [2973] Underfull \vbox (badness 10000) has occurred while \output is active [2974] Underfull \vbox (badness 10000) has occurred while \output is active [2975] [2976] [2977] [2978] [2979] [2980] [2981] [2982] [2983] [2984] [2985] [2986] [2987] Underfull \hbox (badness 1242) in paragraph at lines 7915--7916 []\T1/ptm/m/n/10 Development of mgcv ver-sion 1.8 was part funded by EP-SRC gra nts EP/K005251/1 and [2988] [2989] [2990] [2991] [2992] [2993] [2994] [2995] [2996] [2997] [2998] Underfull \hbox (badness 6001) in paragraph at lines 8560--8562 []\T1/ptm/m/n/10 Simon N. Wood \T1/zi4/m/it/10 \T1/p tm/m/n/10 mod-i-fied from Ven-ables and Rip-ley's [2999] [3000] [3001] [3002] [3003] [3004] [3005] [3006] [3007] [3008] Underfull \vbox (badness 10000) has occurred while \output is active [3009] [3010] Underfull \hbox (badness 1038) in paragraph at lines 9309--9312 []\T1/ptm/m/n/10 The fol-low-ing func-tions are pro-vided: []\T1/zi4/m/it/10 Di m.pdIndot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 coef.pdIdnot[]\T1/ptm/m/n/10 , [] \T1/zi4/m/it/10 corMatrix.pdIdnot[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 9309--9312 []\T1/zi4/m/it/10 logDet.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdConstruc t.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFactor.pdIdnot[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdIdnot[]\T1/ptm/m/n/10 , [3011] Underfull \hbox (badness 10000) in paragraph at lines 9365--9368 []\T1/ptm/m/n/10 These func-tions ([]\T1/zi4/m/it/10 pdTens[]\T1/ptm/m/n/10 , [ ]\T1/zi4/m/it/10 pdConstruct.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdFacto r.pdTens[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 pdMatrix.pdTens[]\T1/ptm/m/n/10 , [3012] [3013] [3014] [3015] [3016] [3017] [3018] [3019] [3020] [3021] [3022] Underfull \hbox (badness 1852) in paragraph at lines 10039--10042 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [3023] [3024] [3025] Underfull \hbox (badness 1852) in paragraph at lines 10208--10211 []\T1/ptm/m/n/10 To fa-cil-i-tate plot-ting with [][][]\T1/zi4/m/it/10 termplot [][][][]\T1/ptm/m/n/10 , if []\T1/zi4/m/it/10 object []\T1/ptm/m/n/10 pos-sesse s an at-tribute []\T1/zi4/m/it/10 "para.only" []\T1/ptm/m/n/10 and [3026] [3027] Underfull \vbox (badness 10000) has occurred while \output is active [3028] [3029] Underfull \hbox (badness 1205) in paragraph at lines 10448--10449 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10448--10449 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for Underfull \hbox (badness 1975) in paragraph at lines 10454--10459 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3030] Underfull \hbox (badness 1205) in paragraph at lines 10538--10539 []\T1/ptm/m/n/10 A data frame con-tain-ing the val-ues of the (named) co-vari-a tes at which Underfull \hbox (badness 2689) in paragraph at lines 10538--10539 \T1/ptm/m/n/10 the smooth term is to be eval-u-ated. Ex-act re-quire-ments are as for [3031] [3032] [3033] Underfull \hbox (badness 1253) in paragraph at lines 10737--10739 []\T1/ptm/m/n/10 Note that the op-ti-mized smooth-ing pa-ram-e-ter se-lec-tion cri-te-rion re-ported is one of GCV, [3034] [3035] [3036] [3037] [3038] [3039] Underfull \hbox (badness 4792) in paragraph at lines 10998--11001 []\T1/ptm/m/n/10 Alternatively, but less straight-for-wardly, the []\T1/zi4/m/i t/10 paraPen []\T1/ptm/m/n/10 ar-gu-ment to [][][]\T1/zi4/m/it/10 gam[][][] []\ T1/ptm/m/n/10 can be used: Underfull \hbox (badness 10000) in paragraph at lines 10998--11001 \T1/ptm/m/n/10 see [][][]\T1/zi4/m/it/10 gam.models[][][][]\T1/ptm/m/n/10 . If smooth-ing pa-ram-e-ter es-ti-ma-tion is by ML or REML (e.g. [3040] Underfull \hbox (badness 10000) in paragraph at lines 11105--11108 []\T1/ptm/m/n/10 the type of resid-u-als wanted. Usu-ally one of []\T1/zi4/m/it /10 "deviance"[]\T1/ptm/m/n/10 , [3041] [3042] [3043] [3044] [3045] [3046] [3047] [3048] [3049] [3050] [3051] [3052] [3053] [3054] Underfull \hbox (badness 3861) in paragraph at lines 11896--11899 []\T1/ptm/m/n/10 INTERNAL rou-tine to ap-ply ini-tial Sl re-parameterization to model ma-trix X, or, if [3055] [3056] Underfull \hbox (badness 1320) in paragraph at lines 12011--12016 \T1/ptm/m/n/10 and []\T1/zi4/m/it/10 b.orig = D*b.repara []\T1/ptm/m/n/10 (wher e []\T1/zi4/m/it/10 b.orig []\T1/ptm/m/n/10 is the orig-i-nal pa-ram-e-ter vec- tor). If ma- [3057] Underfull \hbox (badness 1975) in paragraph at lines 12117--12122 []\T1/ptm/m/n/10 Smooth terms in a GAM for-mula are turned into smooth spec-i-f i-ca-tion ob-jects of class [3058] [3059] Underfull \hbox (badness 1762) in paragraph at lines 12206--12218 \T1/ptm/m/n/10 plate re-gres-sion splines: see [][][]\T1/zi4/m/it/10 tprs[][][] []\T1/ptm/m/n/10 ); []\T1/zi4/m/it/10 ts.smooth.spec []\T1/ptm/m/n/10 (thin pla te re-gres-sion splines with [3060] [3061] [3062] Underfull \hbox (badness 7667) in paragraph at lines 12418--12424 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use adap-tive smooths of o ne or two vari-ables, spec-i-fied via terms like [3063] Underfull \hbox (badness 10000) in paragraph at lines 12459--12460 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3064] [3065] [3066] [3067] Underfull \vbox (badness 10000) has occurred while \output is active [3068] Underfull \hbox (badness 10000) in paragraph at lines 12736--12738 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3069] [3070] Underfull \hbox (badness 10000) in paragraph at lines 12866--12867 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3071] [3072] [3073] Underfull \hbox (badness 1436) in paragraph at lines 13002--13009 \T1/ptm/m/n/10 nest-ing of the smooth within the fac-tor. Note how-ever that: i ) []\T1/zi4/m/it/10 gamm []\T1/ptm/m/n/10 only al-lows one [3074] [3075] Underfull \hbox (badness 10000) in paragraph at lines 13101--13102 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3076] [3077] [3078] [3079] [3080] [3081] [3082] [3083] [3084] [3085] Underfull \hbox (badness 10000) in paragraph at lines 13702--13708 []\T1/ptm/m/n/10 A smooth spec-i-fi-ca-tion ob-ject as pro-duced by a Underfull \hbox (badness 1292) in paragraph at lines 13702--13708 []\T1/zi4/m/it/10 s(...,bs="so",xt=list(bnd=bnd,...)) []\T1/ptm/m/n/10 term in a []\T1/zi4/m/it/10 gam []\T1/ptm/m/n/10 for-mula. Note [3086] [3087] [3088] Underfull \vbox (badness 10000) has occurred while \output is active [3089] Underfull \vbox (badness 10000) has occurred while \output is active [3090] [3091] Underfull \hbox (badness 10000) in paragraph at lines 14045--14046 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3092] [3093] [3094] [3095] Overfull \hbox (35.26862pt too wide) in paragraph at lines 14257--14257 []\T1/zi4/m/n/9 b <- gam(y ~ s(x)+s(f1,x,bs="sz")+s(f2,x,bs="sz")+s(f1,f2,x,bs ="sz",id=1),data=dat,method="REML")[] [3096] [3097] Underfull \hbox (badness 3895) in paragraph at lines 14403--14406 [][][]\T1/zi4/m/it/10 gam[][][] []\T1/ptm/m/n/10 can use isotropic smooths of a ny num-ber of vari-ables, spec-i-fied via terms like [3098] Underfull \hbox (badness 10000) in paragraph at lines 14448--14450 []\T1/ptm/m/n/10 a smooth spec-i-fi-ca-tion ob-ject, usu-ally gen-er-ated by a term [3099] [3100] [3101] [3102] [3103] Underfull \hbox (badness 1371) in paragraph at lines 14728--14734 []\T1/zi4/m/it/10 bs="ad" []\T1/ptm/m/n/10 Uni-vari-ate and bi-vari-ate adap-ti ve smooths are avail-able (see Underfull \hbox (badness 10000) in paragraph at lines 14739--14741 []\T1/zi4/m/it/10 bs="fs" []\T1/ptm/m/n/10 A spe-cial smoother class (see Underfull \hbox (badness 1132) in paragraph at lines 14739--14741 [][][]\T1/zi4/m/it/10 smooth.construct.fs.smooth.spec[][][][]\T1/ptm/m/n/10 ) i s avail-able for the case in which a smooth is [3104] Underfull \hbox (badness 10000) in paragraph at lines 14769--14773 [][][]\T1/zi4/m/it/10 s[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 te[][][][ ]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 t2[][][] [][]tprs[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 Duchon.spline[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 cubic.regression.spline[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 p.spl ine[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 14769--14773 [][][]\T1/zi4/m/it/10 mrf[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 soap[][ ][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Spherical.Spline[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 adaptive.smooth[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 user.defined.smooth[][][][]\T1/ptm/m/n/10 , Overfull \hbox (46.8009pt too wide) in paragraph at lines 14769--14773 [][][]\T1/zi4/m/it/10 smooth.construct.re.smooth.spec[][][][]\T1/ptm/m/n/10 , [ ][][]\T1/zi4/m/it/10 smooth.construct.gp.smooth.spec[][][][]\T1/ptm/m/n/10 ,[][ ][]\T1/zi4/m/it/10 factor.smooth.interaction[][][] [3105] [3106] [3107] [3108] Underfull \hbox (badness 2326) in paragraph at lines 14974--14981 []\T1/ptm/m/n/10 These wrap-per func-tions ex-ist to al-low smooths spec-i-fied us-ing [][][]\T1/zi4/m/it/10 smooth.construct[][][] []\T1/ptm/m/n/10 and [3109] Underfull \hbox (badness 2158) in paragraph at lines 15059--15059 []\T1/ptm/m/it/10 Extract smooth-ing pa-ram-e-ter es-ti-ma-tor co-vari-ance ma- trix from [3110] [3111] [3112] [3113] [3114] [3115] [3116] [3117] [3118] [3119] [3120] [3121] [3122] [3123] [3124] [3125] [3126] [3127] [3128] [3129] [3130] [3131] [3132] [3133] [3134] Overfull \hbox (21.42029pt too wide) in paragraph at lines 16621--16621 []\T1/zi4/m/it/10 vcov(object, sandwich=FALSE, freq = FALSE, dispersion = NULL ,unconditional=FALSE, ...)[] [3135] [3136] Underfull \hbox (badness 1796) in paragraph at lines 16734--16737 []\T1/ptm/m/n/10 other op-tions to pass on to [][][]\T1/zi4/m/it/10 persp[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 image[][][] []\T1/ptm/m/n/10 or [][][] \T1/zi4/m/it/10 contour[][][][]\T1/ptm/m/n/10 . In par-tic-u-lar [3137] [3138] [3139] [3140] Underfull \vbox (badness 10000) has occurred while \output is active [3141] [3142] [3143] [3144] [3145] [3146]) (./nlme-pkg.tex Chapter 25. [3147] [3148] [3149] [3150] [3151] [3152] [3153] [3154] [3155] [3156] [3157] [3158] [3159] [3160] [3161] [3162] [3163] [3164] [3165] [3166] [3167] [3168] [3169] [3170] [3171] [3172] [3173] [3174] [3175] [3176] [3177] [3178] [3179] [3180] Underfull \hbox (badness 10000) in paragraph at lines 2254--2260 [][][]\T1/zi4/m/it/10 ACF.lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 cor ARMA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/ n/10 , [][][]\T1/zi4/m/it/10 Dim.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [3181] [3182] [3183] [3184] [3185] [3186] [3187] [3188] [3189] [3190] [3191] [3192] [3193] [3194] [3195 pdfTeX warning (ext4): destination with the same identifier (name{Rfn.corMatrix .corCompSymm}) has been already used, duplicate ignored ...shipout:D \box_use:N \l_shipout_box \__shipout_drop_firstpage_... l.3189 ] [3196] [3197] [3198] [3199] [3200] [3201] [3202] [3203] [3204] [3205] [3206] [3207] [3208] [3209] [3210] [3211] [3212] [3213] Underfull \hbox (badness 1067) in paragraph at lines 4414--4419 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3214] [3215] [3216] [3217] [3218] [3219] [3220] [3221] [3222] [3223] [3224] [3225] Underfull \hbox (badness 10000) in paragraph at lines 5160--5164 [][][]\T1/zi4/m/it/10 getCovariate.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/ zi4/m/it/10 getCovariate.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/ 10 getCovariate.varFunc[][][][]\T1/ptm/m/n/10 , [3226] [3227] [3228] [3229] [3230] [3231] [3232] Underfull \hbox (badness 10000) in paragraph at lines 5592--5595 [][][]\T1/zi4/m/it/10 getGroupsFormula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 getGroups.data.frame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGro ups.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroups.lmList[][][][]\ T1/ptm/m/n/10 , [3233] [3234] [3235] [3236] [3237] [3238] [3239] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 [][][]\T1/zi4/m/it/10 getGroupsFormula.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 getGroupsFormula.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 getGroupsFormula.lme[][][][]\T1/ptm/m/n/10 , [3240] [3241] [3242] [3243] Underfull \hbox (badness 1490) in paragraph at lines 6248--6259 [][][]\T1/zi4/m/it/10 corClasses[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 glsObject[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/it/10 glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 plot.gls[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 predict.gls[] [][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 qqnorm.gls[][][][]\T1/ptm/m/n/10 , [3244] Underfull \hbox (badness 10000) in paragraph at lines 6312--6314 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3245] [3246] [3247] [3248] [3249] [3250] Underfull \hbox (badness 10000) in paragraph at lines 6724--6726 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3251] [3252] [3253] [3254] Underfull \hbox (badness 10000) in paragraph at lines 6995--7002 [][][]\T1/zi4/m/it/10 formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gap ply[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 gsummary[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plo t.nffGroupedData[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.nfnGroupedD ata[][][][]\T1/ptm/m/n/10 , [3255] [3256] [3257] [3258] Underfull \hbox (badness 10000) in paragraph at lines 7255--7260 [][][]\T1/zi4/m/it/10 Initialize.corStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Initialize.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 In itialize.glsStruct[][][][]\T1/ptm/m/n/10 , [3259] [3260] [3261] [3262] [3263] [3264] [3265] [3266] [3267] [3268] [3269] [3270] [3271] [3272] [3273] [3274] [3275] [3276] [3277] Underfull \hbox (badness 10000) in paragraph at lines 8538--8540 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3278] [3279] [3280] [3281] [3282] Underfull \hbox (badness 10000) in paragraph at lines 8824--8831 [][][]\T1/zi4/m/it/10 lm[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 lme.lmLi st[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 plot.lmList[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 pooledSD[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it /10 predict.lmList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 residuals.lmLi st[][][][]\T1/ptm/m/n/10 , [3283] [3284] [3285] [3286] [3287] [3288] [3289] [3290] Underfull \hbox (badness 10000) in paragraph at lines 9345--9352 [][][]\T1/zi4/m/it/10 lme[][][][]\T1/ptm/m/n/10 ,[][][]\T1/zi4/m/it/10 gls[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik.corStruct[][][][]\T1/ptm/m/n/1 0 , [][][]\T1/zi4/m/it/10 logLik.glsStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 logLik.lmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 logLik .lmList[][][][]\T1/ptm/m/n/10 , [3291] [3292] [3293] [3294] [3295] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix}) has been already used, duplicate ignored \relax l.9707 ...rA{Matrix}{Assign Matrix Values}{Matrix} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Matrix.1} ) has been already used, duplicate ignored \relax l.9707 ...rA{Matrix}{Assign Matrix Values}{Matrix} [3296] [3297] [3298] [3299] [3300] [3301] [3302] [3303] [3304] [3305] [3306] [3307] Underfull \hbox (badness 1596) in paragraph at lines 10484--10510 []\T1/ptm/m/n/10 optionally, any of the fol-low-ing: (i) a two-sided for-mula o f the form [3308] [3309] Underfull \hbox (badness 1490) in paragraph at lines 10600--10606 [][][]\T1/zi4/m/it/10 nlmeControl[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlme.nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlmeObject[][][][]\ T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 nlsList[][][][]\T1/ptm/m/n/10 , [][][]\T1 /zi4/m/it/10 nlmeStruct[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 pdClasses [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 reStruct[][][][]\T1/ptm/m/n/10 , [3310] [3311] [3312] Underfull \hbox (badness 10000) in paragraph at lines 10841--10843 []\T1/ptm/m/n/10 relative step for nu-mer-i-cal deriva-tives cal-cu-la-tions. D e-fault is [3313] [3314] [3315] [3316] [3317] [3318] [3319] [3320] [3321] [3322] [3323] [3324] [3325] [3326] [3327] [3328] [3329] [3330] [3331] [3332] [3333] [3334] [3335] [3336] [3337] [3338] [3339] [3340] [3341] [3342] [3343] [3344] [3345] [3346] [3347] [3348] [3349] [3350] [3351] [3352] [3353] [3354] [3355] Underfull \hbox (badness 1286) in paragraph at lines 13744--13751 []\T1/ptm/m/n/10 an op-tional log-i-cal func-tion or func-tion. If []\T1/zi4/m/ it/10 TRUE []\T1/ptm/m/n/10 and ei-ther []\T1/zi4/m/it/10 inner []\T1/ptm/m/n/1 0 or [3356] [3357] [3358] [3359] [3360] [3361] [3362] [3363] [3364] [3365] [3366] [3367] [3368] [3369] [3370] [3371] [3372] [3373] [3374] [3375] [3376] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects}) has been already used, duplicate ignored \relax l.15187 ...Extract Random Effects}{random.effects} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.random.ef fects.1}) has been already used, duplicate ignored \relax l.15187 ...Extract Random Effects}{random.effects} [3377] [3378] [3379] [3380] [3381] [3382] [3383] [3384] [3385] [3386] Underfull \hbox (badness 3884) in paragraph at lines 15826--15830 []\T1/ptm/m/n/10 Charles F. Minto, Thomas W. Schnider and Steven L. Shafer (199 7). Phar-ma-coki- Underfull \hbox (badness 4846) in paragraph at lines 15826--15830 \T1/ptm/m/n/10 net-ics and Phar-ma-co-dy-nam-ics of Remifen-tanil: II. Model Ap -pli-ca-tion. \T1/ptm/m/it/10 Anes-the-si-ol- Underfull \hbox (badness 1953) in paragraph at lines 15826--15830 \T1/ptm/m/it/10 ogy \T1/ptm/b/n/10 86 \T1/ptm/m/n/10 1, 24--33. [][]$\T1/zi4/m/ it/10 https : / / pubs . asahq . org / anesthesiology / article / 86 / 1 / 24 / 35925 / [3387] [3388] Underfull \hbox (badness 1067) in paragraph at lines 15938--15943 \T1/ptm/m/n/10 ma-trix), []\T1/zi4/m/it/10 fitted []\T1/ptm/m/n/10 (fit-ted val -ues), and []\T1/zi4/m/it/10 residuals []\T1/ptm/m/n/10 (resid-u-als). De-fault s to [3389] [3390] [3391] [3392] Underfull \hbox (badness 1448) in paragraph at lines 16181--16190 \T1/ptm/m/n/10 Op-tions in-clude []\T1/zi4/m/it/10 "response" []\T1/ptm/m/n/10 for the "raw" resid-u-als (ob-served - fit-ted), [3393] [3394] [3395] [3396] [3397] [3398] [3399] [3400] [3401] [3402] Underfull \hbox (badness 1728) in paragraph at lines 16885--16888 []\T1/ptm/m/n/10 an op-tional log-i-cal value used to con-trol the amount of ou t-put in the [3403] [3404] [3405] [3406] [3407] Underfull \hbox (badness 8056) in paragraph at lines 17219--17228 \T1/zi4/m/it/10 Symmetry" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdCompSymm[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Diagonal" []\T1/ptm/m/n/10 for []\T1/zi4/m/it /10 pdDiag[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "Multiple of Underfull \hbox (badness 10000) in paragraph at lines 17219--17228 \T1/zi4/m/it/10 an Identity" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdIdent[]\T 1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite, Natural Underfull \hbox (badness 5756) in paragraph at lines 17219--17228 \T1/zi4/m/it/10 Parametrization" []\T1/ptm/m/n/10 for []\T1/zi4/m/it/10 pdNatur al[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "General Positive-Definite" []\T1/ptm/m/ n/10 for [3408] [3409] [3410] [3411] [3412] Underfull \hbox (badness 10000) in paragraph at lines 17541--17549 [][][]\T1/zi4/m/it/10 varComb[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 var ConstPower[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varConstProp[][][][]\T 1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/z i4/m/it/10 varFixed[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varIdent[][][ ][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 varPower[][][][]\T1/ptm/m/n/10 , [3413] [3414] [3415] [3416] [3417] [3418] [3419] [3420] [3421] [3422] Underfull \hbox (badness 10000) in paragraph at lines 18251--18261 [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/ it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram .corLin[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corRatio[][][][ ]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 18251--18261 [][][]\T1/zi4/m/it/10 Variogram.corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/it/10 Variogram.corSpher[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Vari ogram.default[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.gls[][][] []\T1/ptm/m/n/10 , [3423] [3424] [3425] [3426] [3427] Underfull \hbox (badness 5036) in paragraph at lines 18575--18584 [][][]\T1/zi4/m/it/10 corSpatial[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.default[][][] []\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corExp[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 Variogram.corGaus[][][][]\T1/ptm/m/n/10 , [3428] [3429] [3430] [3431] [3432] [3433] [3434] [3435] [3436] [3437] [3438] [3439] [3440]) (./nnet-pkg.tex Chapter 26. pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom} ) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.multinom. 1}) has been already used, duplicate ignored \relax l.47 ...t Multinomial Log-linear Models}{multinom} [3441] Underfull \hbox (badness 1117) in paragraph at lines 79--88 []\T1/ptm/m/n/10 a for-mula ex-pres-sion as for re-gres-sion mod-els, of the fo rm []\T1/zi4/m/it/10 response ~ [3442] [3443] [3444] [3445] [3446] [3447] [3448]) (./rpart-pkg.tex Chapter 27. [3449] [3450] [3451] [3452] [3453] [3454] [3455] [3456] [3457] [3458] Underfull \hbox (badness 10000) in paragraph at lines 771--775 []\T1/ptm/m/n/10 Logical. If []\T1/zi4/m/it/10 TRUE []\T1/ptm/m/n/10 (de-fault) , adds to the la-bel Underfull \hbox (badness 1348) in paragraph at lines 771--775 \T1/zi4/m/it/10 #events level1/ #events level2/ \T1/ptm/m/n/10 etc. for method []\T1/zi4/m/it/10 class[]\T1/ptm/m/n/10 , \T1/zi4/m/it/10 n \T1/ptm/m/n/10 for [3459] [3460] [3461] [3462] [3463] [3464] [3465] [3466] [3467] [3468] [3469] [3470] [3471] [3472] [3473] [3474] [3475] [3476] [3477]) (./spatial-pkg.tex [3478] Chapter 28. [3479] [3480] [3481] [3482] [3483] [3484] Underfull \hbox (badness 10000) in paragraph at lines 423--427 [3485] [3486] [3487] [3488] [3489] [3490] [3491] [3492] [3493] [3494] [3495] [3496] [3497]) (./survival-pkg.tex [3498] Chapter 29. [3499] [3500] [3501] [3502] Underfull \hbox (badness 6412) in paragraph at lines 284--286 []\T1/ptm/m/n/10 an op-tional list or vec-tor of group-ing el-e-ments, each as long as [3503] [3504] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml}) has been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.aml.1}) h as been already used, duplicate ignored \relax l.384 ... Myelogenous Leukemia survival data}{aml} [3505] [3506] [3507] [3508] [3509] [3510] [3511] [3512] [3513] [3514] [3515] Underfull \hbox (badness 1097) in paragraph at lines 1110--1112 []\T1/ptm/m/n/10 F.J. Anscombe (1949). Trans-for-ma-tions of Pois-son, bi-no-mi al and negative-binomial data. [3516] [3517] [3518] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.colon}) h as been already used, duplicate ignored \relax l.1312 ...erapy for Stage B/C colon cancer}{colon} [3519] Underfull \hbox (badness 3679) in paragraph at lines 1360--1364 []\T1/ptm/m/n/10 Peter Hig-gins has pointed out a data in-con-sis-tency, re-vea led by []\T1/zi4/m/it/10 table(colon$nodes, [3520] [3521] [3522] [3523] [3524] [3525] [3526] [3527] [3528] Underfull \hbox (badness 3250) in paragraph at lines 2048--2063 \T1/ptm/m/n/10 ing guides and prepend []\T1/zi4/m/it/10 survival:: []\T1/ptm/m/ n/10 onto ev-er-thing, in-clud-ing the spe-cial terms, e.g., Underfull \hbox (badness 10000) in paragraph at lines 2048--2063 []\T1/zi4/m/it/10 survival::coxph(survival:Surv(time, status) ~ age + survival: :cluster(inst), [3529] [3530] [3531] [3532] [3533] [3534] [3535] [3536] [3537] [3538] [3539] [3540] [3541] [3542] [3543] [3544] [3545] [3546] [3547] [3548] [3549] Underfull \hbox (badness 1389) in paragraph at lines 3500--3502 []\T1/ptm/m/n/10 Often used to add the ex-pected sur-vival curve(s) to a Kaplan -Meier plot gen-er-ated with [3550] [3551] [3552] [3553] Overfull \hbox (467.89665pt too wide) in alignment at lines 3786--3786 [] [] [3554] [3555] [3556] [3557] [3558] [3559] [3560] [3561] [3562] [3563] [3564] [3565] [3566] [3567] [3568] [3569] [3570] [3571] [3572] [3573] [3574] [3575] [3576] [3577] [3578] [3579] [3580] Underfull \hbox (badness 5274) in paragraph at lines 5520--5522 []\T1/ptm/m/n/10 an ob-ject of class []\T1/zi4/m/it/10 "summary.survfit"[]\T1/p tm/m/n/10 , which is the re-sult of the [3581] [3582] [3583] [3584] [3585] [3586] [3587] [3588] [3589] [3590] [3591] [3592] [3593] [3594] [3595] [3596] [3597] Underfull \hbox (badness 1281) in paragraph at lines 6743--6746 []\T1/ptm/m/n/10 type of resid-u-als, with choices of []\T1/zi4/m/it/10 "respon se"[]\T1/ptm/m/n/10 , []\T1/zi4/m/it/10 "deviance"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/it/10 "dfbeta"[]\T1/ptm/m/n/10 , [3598] [3599] [3600] [3601] [3602] [3603] [3604] [3605] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.solder}) has been already used, duplicate ignored \relax l.7312 ...ata from a soldering experiment}{solder} [3606] [3607] [3608] [3609] [3610] [3611] [3612] [3613] [3614] [3615] [3616] [3617] [3618] [3619] [3620] [3621] [3622] [3623] [3624] [3625] [3626] [3627] [3628] Underfull \hbox (badness 1038) in paragraph at lines 8899--8905 []\T1/ptm/m/n/10 op-tion does not cre-ate a curve, rather it re-trieves the pre -dicted sur-vival [3629] [3630] [3631] [3632] [3633] Underfull \hbox (badness 10000) in paragraph at lines 9257--9262 [][][]\T1/zi4/m/it/10 survfit.formula[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/i t/10 survfit.coxph[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 survfit.object [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/it/10 print.survfit[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/it/10 plot.survfit[][][][]\T1/ptm/m/n/10 , [3634] [3635] [3636] [3637] [3638] [3639] [3640] [3641] [3642] [3643] [3644] [3645] Underfull \hbox (badness 1354) in paragraph at lines 10209--10213 []\T1/ptm/m/n/10 survival times, for time de-pen-dent pre-dic-tion. 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cbind2,sparseMatrix,diagonalMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 7493--7495 []\T1/zi4/m/it/10 cbind2,sparseMatrix,sparseMatrix-method [3730] [3731] [3732] Overfull \hbox (10.8567pt too wide) in paragraph at lines 8260--8262 []\T1/zi4/m/it/10 coerce,atomicVector,dsparseVector-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8262--8264 []\T1/zi4/m/it/10 coerce,atomicVector,sparseVector-method [3733] Overfull \hbox (10.8567pt too wide) in paragraph at lines 8278--8280 []\T1/zi4/m/it/10 coerce,CHMfactor,triangularMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8282--8284 []\T1/zi4/m/it/10 coerce,CsparseMatrix,denseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8284--8286 []\T1/zi4/m/it/10 coerce,CsparseMatrix,generalMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8288--8290 []\T1/zi4/m/it/10 coerce,CsparseMatrix,packedMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8290--8292 []\T1/zi4/m/it/10 coerce,CsparseMatrix,RsparseMatrix-method Overfull \hbox (10.8567pt too wide) in paragraph at lines 8292--8294 []\T1/zi4/m/it/10 coerce,CsparseMatrix,sparseVector-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8294--8296 []\T1/zi4/m/it/10 coerce,CsparseMatrix,TsparseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 8296--8298 []\T1/zi4/m/it/10 coerce,CsparseMatrix,unpackedMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8300--8302 []\T1/zi4/m/it/10 coerce,denseMatrix,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8302--8304 []\T1/zi4/m/it/10 coerce,denseMatrix,ddenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8306--8308 []\T1/zi4/m/it/10 coerce,denseMatrix,dsparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8308--8310 []\T1/zi4/m/it/10 coerce,denseMatrix,generalMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8310--8312 []\T1/zi4/m/it/10 coerce,denseMatrix,ldenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8314--8316 []\T1/zi4/m/it/10 coerce,denseMatrix,lsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8318--8320 []\T1/zi4/m/it/10 coerce,denseMatrix,ndenseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8322--8324 []\T1/zi4/m/it/10 coerce,denseMatrix,nsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8324--8326 []\T1/zi4/m/it/10 coerce,denseMatrix,packedMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8326--8328 []\T1/zi4/m/it/10 coerce,denseMatrix,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8328--8330 []\T1/zi4/m/it/10 coerce,denseMatrix,sparseMatrix-method Overfull \hbox (5.8567pt too wide) in paragraph at lines 8330--8332 []\T1/zi4/m/it/10 coerce,denseMatrix,TsparseMatrix-method Overfull 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coerce,diagonalMatrix,lsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8366--8368 []\T1/zi4/m/it/10 coerce,diagonalMatrix,ndenseMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 8370--8372 []\T1/zi4/m/it/10 coerce,diagonalMatrix,nsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8372--8374 []\T1/zi4/m/it/10 coerce,diagonalMatrix,packedMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 8374--8376 []\T1/zi4/m/it/10 coerce,diagonalMatrix,RsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8376--8378 []\T1/zi4/m/it/10 coerce,diagonalMatrix,sparseVector-method Overfull \hbox (30.8567pt too wide) in paragraph at lines 8378--8380 []\T1/zi4/m/it/10 coerce,diagonalMatrix,symmetricMatrix-method [3734] Overfull \hbox (35.8567pt too wide) in paragraph at lines 8380--8382 []\T1/zi4/m/it/10 coerce,diagonalMatrix,triangularMatrix-method Overfull \hbox (20.8567pt too wide) in paragraph at lines 8382--8384 []\T1/zi4/m/it/10 coerce,diagonalMatrix,TsparseMatrix-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 8384--8386 []\T1/zi4/m/it/10 coerce,diagonalMatrix,unpackedMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8400--8402 []\T1/zi4/m/it/10 coerce,dsparseMatrix,lsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8404--8406 []\T1/zi4/m/it/10 coerce,dsparseMatrix,nsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8456--8458 []\T1/zi4/m/it/10 coerce,indMatrix,diagonalMatrix-method [3735] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8486--8488 []\T1/zi4/m/it/10 coerce,indMatrix,unpackedMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8506--8508 []\T1/zi4/m/it/10 coerce,lsparseMatrix,dsparseMatrix-method Overfull \hbox (15.8567pt too wide) in paragraph at lines 8510--8512 []\T1/zi4/m/it/10 coerce,lsparseMatrix,nsparseMatrix-method [3736] Overfull \hbox (0.8567pt too wide) in paragraph at lines 8608--8610 []\T1/zi4/m/it/10 coerce,matrix.coo,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8616--8618 []\T1/zi4/m/it/10 coerce,matrix.coo,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8620--8622 []\T1/zi4/m/it/10 coerce,matrix.coo,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8622--8624 []\T1/zi4/m/it/10 coerce,matrix.csc,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8628--8630 []\T1/zi4/m/it/10 coerce,matrix.csc,RsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8632--8634 []\T1/zi4/m/it/10 coerce,matrix.csc,TsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8634--8636 []\T1/zi4/m/it/10 coerce,matrix.csr,CsparseMatrix-method Overfull \hbox (0.8567pt too wide) in paragraph at lines 8642--8644 []\T1/zi4/m/it/10 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10137--10139 []\T1/zi4/m/it/10 determinant,diagonalMatrix,logical-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 10157--10159 []\T1/zi4/m/it/10 determinant,MatrixFactorization,missing-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 10161--10163 []\T1/zi4/m/it/10 determinant,triangularMatrix,logical-method [3746] [3747] [3748] Overfull \hbox (15.01662pt too wide) in paragraph at lines 10861--10863 \T1/ptm/m/it/10 (\T1/zi4/m/it/10 smooth.construct.ds.smooth.spec\T1/ptm/m/it/10 )\T1/ptm/m/n/10 , [3749] [3750] [3751] [3752] Overfull \hbox (35.8567pt too wide) in paragraph at lines 11752--11754 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,character-method Overfull \hbox (25.8567pt too wide) in paragraph at lines 11754--11756 []\T1/zi4/m/it/10 forceSymmetric,CsparseMatrix,missing-method Overfull \hbox (40.8567pt too wide) in paragraph at lines 11756--11758 []\T1/zi4/m/it/10 forceSymmetric,diagonalMatrix,character-method Overfull \hbox (30.8567pt too wide) 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Transcript written on fullrefman.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-FAQ.texi @setfilename R-FAQ.info This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) [1{/usr/share/texlive/te xmf-var/fonts/map/pdftex/updmap/pdftex.map}] [-1] Chapter 1 Cross reference values unknown; you must run TeX again. [1] Chapter 2 [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 641--644 []@textrm (+20) Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat -ics''. Underfull \hbox (badness 10000) in paragraph at lines 641--644 [][]@texttt https:// master. bioconductor. org/ help/ publications/ book s/ Underfull \hbox (badness 10000) in paragraph at lines 668--673 @textrm (+20) (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Underfull \hbox (badness 10000) in paragraph at lines 1537--1540 []@textrm (+20) See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_ programming_language# Underfull \hbox (badness 10000) in paragraph at lines 1537--1540 @texttt Commercialized_versions_of_R[][][] @textrm (+20) for point-ers to com-m er-cial-ized ver-sions of Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1825--1825 []@smalltt MASS Sup-port Func-tions and Datasets for Ven-ables and Ri p-ley's MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] Chapter 10 [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (49 pages, 361785 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex) [1{/usr/share/texlive/te xmf-var/fonts/map/pdftex/updmap/pdftex.map}] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-FAQ.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-FAQ.toc) Chapter 1 (/builddir/build/BUILD/R-4.3.1/doc/manual/R-FAQ.aux) [1] Chapter 2 [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 641--644 []@textrm (+20) Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat -ics''. Underfull \hbox (badness 10000) in paragraph at lines 641--644 [][]@texttt https:// master. bioconductor. org/ help/ publications/ book s/ Underfull \hbox (badness 10000) in paragraph at lines 668--673 @textrm (+20) (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Underfull \hbox (badness 10000) in paragraph at lines 1537--1540 []@textrm (+20) See also [][]@texttt https:// en. wikipedia. org/ wiki/ R_ programming_language# Underfull \hbox (badness 10000) in paragraph at lines 1537--1540 @texttt Commercialized_versions_of_R[][][] @textrm (+20) for point-ers to com-m er-cial-ized ver-sions of Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1825--1825 []@smalltt MASS Sup-port Func-tions and Datasets for Ven-ables and Ri p-ley's MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] Chapter 10 [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (51 pages, 377726 bytes). Transcript written on R-FAQ.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-admin.texi @setfilename R-admin.info This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-admin.t2d/pdf/xtr/R-admin.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-admin.cp Writing index file R-admin.en Underfull \hbox (badness 8019) in paragraph at lines 152--157 []@textrm (+20) The tar-balls are avail-able from [][]@texttt https:// stat. ethz. ch/ R/ daily/ [][][]@textrm (+20) . Down-load [1] Chapter 2 [2] Cross reference values unknown; you must run TeX again. [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1543--1547 []@textrm (+20) Parallel check-ing of pack-age sources (part of @texttt make ch eck-devel[] @textrm (+20) and @texttt make Chapter 4 [17] [18] [19] [20] Chapter 5 [21] Chapter 6 [22] [23] [24] [25] [26] Overfull \hbox (56.55324pt too wide) in paragraph at lines 2379--2379 []@texttt ./configure CC="clang -arch arm64" CFLAGS=-O2 CXX="clang++ -arch arm 64" CXXFLAGS=-O2[] [27] [28] [29] [30] Chapter 7 [31] [32] [33] Chapter 8 [34] Chapter 9 [35] [36] Appendix A [37] [38] [39] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3341--3341 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] Appendix B [50] [51] [52] [53] [54] Appendix C [55] [56] [57] [58] [59] [60] Overfull \hbox (112.72658pt too wide) in paragraph at lines 5238--5238 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/x86_64/pcre2-10.42-d arwin.20-x86_64.tar.xz[] Overfull \hbox (95.48051pt too wide) in paragraph at lines 5240--5240 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/x86_64/xz-5.4.2-darw in.20-x86_64.tar.xz[] [61] [62] Overfull \hbox (148.53224pt too wide) in paragraph at lines 5382--5382 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (17.16873pt too wide) in paragraph at lines 5391--5392 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][][]@smallrm .| [63] Overfull \hbox (79.54799pt too wide) in paragraph at lines 5513--5513 []@texttt CC="$LOCAL/llvm/bin/clang -isysroot /Library/Developer/CommandLineTo ols/SDKs/MacOSX.sdk"[] Overfull \hbox (96.79405pt too wide) in paragraph at lines 5514--5514 []@texttt CXX="$LOCAL/llvm/bin/clang++ -isysroot /Library/Developer/CommandLin eTools/SDKs/MacOSX.sdk"[] Overfull \hbox (51.1502pt too wide) in paragraph at lines 5576--5576 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][][]| [64] [65] [66] [67] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5862--5862 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0/libgfortran.5. dylib \[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5867--5867 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0/libquadmath.0. dylib \[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 5908--5908 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [68] [69] (Function and variable index) [70] No file R-admin.vrs. (Concept index) [71] No file R-admin.cps. (Environment variable index) [72] No file R-admin.ens. [73] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (76 pages, 485798 bytes). Transcript written on R-admin.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-admin.t2d/pdf/xtr/R-admin.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-admin.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-admin.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-admin.toc) Chapter 1 (/builddir/build/BUILD/R-4.3.1/doc/manual/R-admin.aux) Writing index file R-admin.cp Writing index file R-admin.en Underfull \hbox (badness 8019) in paragraph at lines 152--157 []@textrm (+20) The tar-balls are avail-able from [][]@texttt https:// stat. ethz. ch/ R/ daily/ [][][]@textrm (+20) . Down-load [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] Chapter 3 [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1543--1547 []@textrm (+20) Parallel check-ing of pack-age sources (part of @texttt make ch eck-devel[] @textrm (+20) and @texttt make Chapter 4 [17] [18] [19] [20] Chapter 5 [21] Chapter 6 [22] [23] [24] [25] [26] Overfull \hbox (56.55324pt too wide) in paragraph at lines 2379--2379 []@texttt ./configure CC="clang -arch arm64" CFLAGS=-O2 CXX="clang++ -arch arm 64" CXXFLAGS=-O2[] [27] [28] [29] [30] Chapter 7 [31] [32] [33] Chapter 8 [34] Chapter 9 [35] [36] Appendix A [37] [38] [39] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3341--3341 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] Appendix B [50] [51] [52] [53] [54] Appendix C [55] [56] [57] [58] [59] [60] Overfull \hbox (112.72658pt too wide) in paragraph at lines 5238--5238 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/x86_64/pcre2-10.42-d arwin.20-x86_64.tar.xz[] Overfull \hbox (95.48051pt too wide) in paragraph at lines 5240--5240 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/x86_64/xz-5.4.2-darw in.20-x86_64.tar.xz[] l.5287: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5287: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5287: Undefined cross reference ` Tcl/Tk headers and libraries-pg'. [61] [62] Overfull \hbox (148.53224pt too wide) in paragraph at lines 5382--5382 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (17.16873pt too wide) in paragraph at lines 5391--5392 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][][]@smallrm .| [63] Overfull \hbox (79.54799pt too wide) in paragraph at lines 5513--5513 []@texttt CC="$LOCAL/llvm/bin/clang -isysroot /Library/Developer/CommandLineTo ols/SDKs/MacOSX.sdk"[] Overfull \hbox (96.79405pt too wide) in paragraph at lines 5514--5514 []@texttt CXX="$LOCAL/llvm/bin/clang++ -isysroot /Library/Developer/CommandLin eTools/SDKs/MacOSX.sdk"[] Overfull \hbox (51.1502pt too wide) in paragraph at lines 5576--5576 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][][]| [64] [65] [66] [67] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5862--5862 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0/libgfortran.5. dylib \[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5867--5867 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0/libquadmath.0. dylib \[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 5908--5908 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [68] [69] (Function and variable index) [70] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-admin.vrs) (Concept index) [71] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-admin.cps) (Environment variable index) [72] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-admin.ens) [73] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (78 pages, 530389 bytes). Transcript written on R-admin.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-data.texi @setfilename R-data.info This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-data.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 445--449 []@textrm (+20) Function @texttt write.foreign[] @textrm (+20) in pack-age [][] @textbf (+20) foreign @textrm (+20) (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] No file R-data.vrs. (Concept index) [29] No file R-data.cps. [30] ) (see the transcript file for additional information) Output written on R-data.pdf (33 pages, 271451 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.toc [-1]) [-2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.aux) Chapter 1 [1] Writing index file R-data.cp [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 445--449 []@textrm (+20) Function @texttt write.foreign[] @textrm (+20) in pack-age [][] @textbf (+20) foreign @textrm (+20) (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.vrs [29]) (Concept index) [30] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.cps) [31] ) (see the transcript file for additional information) Output written on R-data.pdf (35 pages, 311132 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.toc [-1]) [-2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.aux) Chapter 1 [1] Writing index file R-data.cp [2] [3] [4] Underfull \hbox (badness 10000) in paragraph at lines 445--449 []@textrm (+20) Function @texttt write.foreign[] @textrm (+20) in pack-age [][] @textbf (+20) foreign @textrm (+20) (@texttt https:// CRAN. R-project. org/ Chapter 2 [5] [6] [7] [8] [9] [10] Chapter 3 [11] [12] Chapter 4 [13] [14] [15] [16] [17] [18] Chapter 5 [19] Chapter 6 [20] Chapter 7 [21] [22] [23] [24] Chapter 8 [25] Chapter 9 [26] Appendix A [27] (Function and variable index) [28] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.vrs [29]) (Concept index) [30] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-data.cps) [31] ) (see the transcript file for additional information) Output written on R-data.pdf (35 pages, 311137 bytes). Transcript written on R-data.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-exts.texi @setfilename R-exts.info This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-exts.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 499--502 []@textrm (+20) The `@texttt Depends[]@textrm (+20) '[], `@texttt Imports[]@tex trm (+20) '[], `@texttt Suggests[]@textrm (+20) '[], `@texttt Enhances[]@textrm (+20) '[], `@texttt LinkingTo[]@textrm (+20) '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] Underfull \hbox (badness 10000) in paragraph at lines 1300--1301 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1301--1302 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@texttts l R_ Underfull \hbox (badness 10000) in paragraph at lines 1306--1308 @texttt R_MAKEVARS_USER[]@textrm (+20) , @texttt ~/.R/Makevars.ucrt[]@textrm (+20) , Underfull \hbox (badness 10000) in paragraph at lines 1306--1308 @texttt ~/.R/Makevars.win64[]@textrm (+20) , Underfull \hbox (badness 10000) in paragraph at lines 1314--1315 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1315--1316 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@texttts l R_ Underfull \hbox (badness 10000) in paragraph at lines 1320--1322 @texttt R_MAKEVARS_USER[]@textrm (+20) , @texttt ~/.R/Makevars.ucrt[]@textrm (+20) , Underfull \hbox (badness 10000) in paragraph at lines 1320--1322 @texttt ~/.R/Makevars.win64[]@textrm (+20) , [15] [16] [17] [18] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1585--1585 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1586--1586 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2665--2665 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] [30] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2667--2667 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2911--2914 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Underfull \hbox (badness 10000) in paragraph at lines 2993--2999 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Overfull \hbox (39.30717pt too wide) in paragraph at lines 3068--3068 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [35] [36] Underfull \hbox (badness 10000) in paragraph at lines 3200--3204 @textrm (+20) ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manu al/ cmake-env-variables. 7. html# [37] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3301--3301 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4931--4931 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4950--4950 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [56] [57] [58] [59] [60] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5388--5388 []@texttt 1.1 1.2 1.3 1.4 5.0 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 (announ ced 21)[] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5403--5403 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5405--5405 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5406--5406 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5421--5421 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [61] [62] [63] [64] [65] [66] Underfull \hbox (badness 10000) in paragraph at lines 5944--5947 @texttt gcc/ C-Extensions. html[][][] @textrm (+20) and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [67] [68] [69] Overfull \hbox (32.24495pt too wide) in paragraph at lines 6193--6193 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [70] Underfull \hbox (badness 10000) in paragraph at lines 6329--6330 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [71] [72] [73] [74] [75] [76] Underfull \hbox (badness 10000) in paragraph at lines 6842--6852 []@textrm (+20) R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-project. org[]@textrm (+20) )[][]) and RForge Chapter 2 [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] Underfull \hbox (badness 10000) in paragraph at lines 7892--7899 []@textrm (+20) The two com-monly used sim-ple forms are @texttt \figure{@textt tsl filename@texttt }[] @textrm (+20) and [90] [91] [92] [93] [94] Chapter 3 [95] [96] [97] [98] [99] [100] [101] [102] Chapter 4 [103] [104] [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9361--9370 []@texttt debug[] @textrm (+20) can be used for hid-den func-tions and S3 meth- ods by e.g. [108] [109] [110] Underfull \hbox (badness 10000) in paragraph at lines 9634--9646 @textrm (+20) See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual . html# controlling-code-generation[][][]@textrm (+20) , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9650--9651 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [111] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9789--9789 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [112] Underfull \hbox (badness 10000) in paragraph at lines 9822--9824 []@textrm (+20) This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [113] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9968--9968 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [114] [115] [116] [117] [118] Underfull \hbox (badness 10000) in paragraph at lines 10338--10340 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [119] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10397--10397 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10416--10416 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10427--10427 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10457--10457 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] [120] Chapter 5 [121] [122] [123] [124] [125] [126] [127] [128] [129] [130] Overfull \hbox (30.03963pt too wide) in paragraph at lines 11337--11337 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [131] [132] Overfull \hbox (39.30717pt too wide) in paragraph at lines 11501--11501 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [133] [134] [135] [136] [137] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11935--11935 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] Underfull \hbox (badness 10000) in paragraph at lines 12945--12949 []@textrm (+20) Functions @texttt any_duplicated[] @textrm (+20) and @texttt an y_duplicated3[] @textrm (+20) are fast ver-sions of R's [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] Overfull \hbox (22.06111pt too wide) in paragraph at lines 14043--14043 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [161] Overfull \hbox (50.80455pt too wide) in paragraph at lines 14138--14138 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [162] Chapter 6 [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] Warning: unbalanced parentheses in @def... [180] [181] [182] [183] [184] [185] Underfull \hbox (badness 10000) in paragraph at lines 16184--16190 []@textrm (+20) The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/G raphicsEngine.h[]@textrm (+20) , @texttt R_ Chapter 7 [186] [187] Chapter 8 [188] [189] [190] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16602--16602 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [191] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16660--16660 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [192] [193] [194] [195] [196] [197] Underfull \hbox (badness 10000) in paragraph at lines 17178--17185 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm (+20) from an ad-min-i s-tra-tive in-stall and [198] [199] (Function and variable index) [200] No file R-exts.vrs. (Concept index) [201] No file R-exts.cps. [202] ) (see the transcript file for additional information) Output written on R-exts.pdf (205 pages, 1013704 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.aux) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 499--502 []@textrm (+20) The `@texttt Depends[]@textrm (+20) '[], `@texttt Imports[]@tex trm (+20) '[], `@texttt Suggests[]@textrm (+20) '[], `@texttt Enhances[]@textrm (+20) '[], `@texttt LinkingTo[]@textrm (+20) '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] Underfull \hbox (badness 10000) in paragraph at lines 1300--1301 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1301--1302 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@texttts l R_ Underfull \hbox (badness 10000) in paragraph at lines 1306--1308 @texttt R_MAKEVARS_USER[]@textrm (+20) , @texttt ~/.R/Makevars.ucrt[]@textrm (+20) , Underfull \hbox (badness 10000) in paragraph at lines 1306--1308 @texttt ~/.R/Makevars.win64[]@textrm (+20) , Underfull \hbox (badness 10000) in paragraph at lines 1314--1315 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1315--1316 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@texttts l R_ Underfull \hbox (badness 10000) in paragraph at lines 1320--1322 @texttt R_MAKEVARS_USER[]@textrm (+20) , @texttt ~/.R/Makevars.ucrt[]@textrm (+20) , Underfull \hbox (badness 10000) in paragraph at lines 1320--1322 @texttt ~/.R/Makevars.win64[]@textrm (+20) , [15] [16] [17] [18] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1585--1585 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1586--1586 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2665--2665 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] [30] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2667--2667 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2911--2914 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Underfull \hbox (badness 10000) in paragraph at lines 2993--2999 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Overfull \hbox (39.30717pt too wide) in paragraph at lines 3068--3068 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [35] [36] Underfull \hbox (badness 10000) in paragraph at lines 3200--3204 @textrm (+20) ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manu al/ cmake-env-variables. 7. html# [37] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3301--3301 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4931--4931 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4950--4950 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [56] [57] [58] [59] [60] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5388--5388 []@texttt 1.1 1.2 1.3 1.4 5.0 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 (announ ced 21)[] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5403--5403 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5405--5405 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5406--5406 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5421--5421 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [61] [62] [63] [64] [65] [66] Underfull \hbox (badness 10000) in paragraph at lines 5944--5947 @texttt gcc/ C-Extensions. html[][][] @textrm (+20) and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [67] [68] [69] Overfull \hbox (32.24495pt too wide) in paragraph at lines 6193--6193 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [70] Underfull \hbox (badness 10000) in paragraph at lines 6329--6330 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [71] [72] [73] [74] [75] [76] Underfull \hbox (badness 10000) in paragraph at lines 6842--6852 []@textrm (+20) R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-project. org[]@textrm (+20) )[][]) and RForge Chapter 2 [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] Underfull \hbox (badness 10000) in paragraph at lines 7892--7899 []@textrm (+20) The two com-monly used sim-ple forms are @texttt \figure{@textt tsl filename@texttt }[] @textrm (+20) and [90] [91] [92] [93] [94] Chapter 3 [95] [96] [97] [98] [99] [100] [101] [102] Chapter 4 [103] [104] [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9361--9370 []@texttt debug[] @textrm (+20) can be used for hid-den func-tions and S3 meth- ods by e.g. [108] [109] [110] Underfull \hbox (badness 10000) in paragraph at lines 9634--9646 @textrm (+20) See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual . html# controlling-code-generation[][][]@textrm (+20) , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9650--9651 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [111] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9789--9789 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [112] Underfull \hbox (badness 10000) in paragraph at lines 9822--9824 []@textrm (+20) This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [113] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9968--9968 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [114] [115] [116] [117] [118] Underfull \hbox (badness 10000) in paragraph at lines 10338--10340 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [119] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10397--10397 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10416--10416 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10427--10427 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10457--10457 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] [120] Chapter 5 [121] [122] [123] [124] [125] [126] [127] [128] [129] [130] Overfull \hbox (30.03963pt too wide) in paragraph at lines 11337--11337 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [131] [132] Overfull \hbox (39.30717pt too wide) in paragraph at lines 11501--11501 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [133] [134] [135] [136] [137] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11935--11935 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] Underfull \hbox (badness 10000) in paragraph at lines 12945--12949 []@textrm (+20) Functions @texttt any_duplicated[] @textrm (+20) and @texttt an y_duplicated3[] @textrm (+20) are fast ver-sions of R's [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] Overfull \hbox (22.06111pt too wide) in paragraph at lines 14043--14043 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [161] Overfull \hbox (50.80455pt too wide) in paragraph at lines 14138--14138 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [162] Chapter 6 [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] Warning: unbalanced parentheses in @def... [180] [181] [182] [183] [184] [185] Underfull \hbox (badness 10000) in paragraph at lines 16184--16190 []@textrm (+20) The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/G raphicsEngine.h[]@textrm (+20) , @texttt R_ Chapter 7 [186] [187] Chapter 8 [188] [189] [190] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16602--16602 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [191] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16660--16660 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [192] [193] [194] [195] [196] [197] Underfull \hbox (badness 10000) in paragraph at lines 17178--17185 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm (+20) from an ad-min-i s-tra-tive in-stall and [198] [199] (Function and variable index) [200] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.vrs [201] [202] [203] [204]) (Concept index) [205] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.cps [206]) [207] ) (see the transcript file for additional information) Output written on R-exts.pdf (213 pages, 1089775 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.toc) (Acknowledgements) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.aux) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 499--502 []@textrm (+20) The `@texttt Depends[]@textrm (+20) '[], `@texttt Imports[]@tex trm (+20) '[], `@texttt Suggests[]@textrm (+20) '[], `@texttt Enhances[]@textrm (+20) '[], `@texttt LinkingTo[]@textrm (+20) '[] and [6] [7] [8] [9] [10] [11] [12] [13] [14] Underfull \hbox (badness 10000) in paragraph at lines 1300--1301 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1301--1302 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@texttts l R_ Underfull \hbox (badness 10000) in paragraph at lines 1306--1308 @texttt R_MAKEVARS_USER[]@textrm (+20) , @texttt ~/.R/Makevars.ucrt[]@textrm (+20) , Underfull \hbox (badness 10000) in paragraph at lines 1306--1308 @texttt ~/.R/Makevars.win64[]@textrm (+20) , Underfull \hbox (badness 10000) in paragraph at lines 1314--1315 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1315--1316 @texttt R_MAKEVARS_SITE[]@textrm (+20) , @textttsl R_HOME@texttt /etc/@texttts l R_ Underfull \hbox (badness 10000) in paragraph at lines 1320--1322 @texttt R_MAKEVARS_USER[]@textrm (+20) , @texttt ~/.R/Makevars.ucrt[]@textrm (+20) , Underfull \hbox (badness 10000) in paragraph at lines 1320--1322 @texttt ~/.R/Makevars.win64[]@textrm (+20) , [15] [16] [17] [18] Overfull \hbox (73.7993pt too wide) in paragraph at lines 1585--1585 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (50.80455pt too wide) in paragraph at lines 1586--1586 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] Overfull \hbox (46.15797pt too wide) in paragraph at lines 2665--2665 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] [30] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2667--2667 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [31] [32] Underfull \hbox (badness 10000) in paragraph at lines 2911--2914 [][][]@smallrm Some changes are linked from [][]@smalltt https:// isocpp. org / std/ standing-documents/ [33] Underfull \hbox (badness 10000) in paragraph at lines 2993--2999 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][][] @smallrm or [34] Overfull \hbox (39.30717pt too wide) in paragraph at lines 3068--3068 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [35] [36] Underfull \hbox (badness 10000) in paragraph at lines 3200--3204 @textrm (+20) ([][]@texttt https:// cmake. org/ cmake/ help/ latest/ manu al/ cmake-env-variables. 7. html# [37] Overfull \hbox (22.06111pt too wide) in paragraph at lines 3301--3301 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [38] [39] [40] [41] [42] [43] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] Overfull \hbox (59.67485pt too wide) in paragraph at lines 4931--4931 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (37.99364pt too wide) in paragraph at lines 4950--4950 []@texttt CXXFLAGS = `"${RBIN}" CMD config CXXFLAGS` `"${RBIN}" CMD config CXX PICFLAGS`[] [56] [57] [58] [59] [60] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5388--5388 []@texttt 1.1 1.2 1.3 1.4 5.0 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 (announ ced 21)[] Overfull \hbox (32.24495pt too wide) in paragraph at lines 5403--5403 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 5405--5405 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (43.74232pt too wide) in paragraph at lines 5406--5406 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (55.2397pt too wide) in paragraph at lines 5421--5421 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [61] [62] [63] [64] [65] [66] Underfull \hbox (badness 10000) in paragraph at lines 5944--5947 @texttt gcc/ C-Extensions. html[][][] @textrm (+20) and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [67] [68] [69] Overfull \hbox (32.24495pt too wide) in paragraph at lines 6193--6193 []@texttt 'register' storage class specifier is deprecated and incompatible wi th C++17[] [70] Underfull \hbox (badness 10000) in paragraph at lines 6329--6330 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [71] [72] [73] [74] [75] [76] Underfull \hbox (badness 10000) in paragraph at lines 6842--6852 []@textrm (+20) R-Forge ([][]R-Forge.r-project.org (@texttt https:// R-Forge. r-project. org[]@textrm (+20) )[][]) and RForge Chapter 2 [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] [89] Underfull \hbox (badness 10000) in paragraph at lines 7892--7899 []@textrm (+20) The two com-monly used sim-ple forms are @texttt \figure{@textt tsl filename@texttt }[] @textrm (+20) and [90] [91] [92] [93] [94] Chapter 3 [95] [96] [97] [98] [99] [100] [101] [102] Chapter 4 [103] [104] [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 9361--9370 []@texttt debug[] @textrm (+20) can be used for hid-den func-tions and S3 meth- ods by e.g. [108] [109] [110] Underfull \hbox (badness 10000) in paragraph at lines 9634--9646 @textrm (+20) See [][]@texttt https:// clang. llvm. org/ docs/ UsersManual . html# controlling-code-generation[][][]@textrm (+20) , Overfull \hbox (27.28387pt too wide) in paragraph at lines 9650--9651 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [111] Overfull \hbox (56.55324pt too wide) in paragraph at lines 9789--9789 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] [112] Underfull \hbox (badness 10000) in paragraph at lines 9822--9824 []@textrm (+20) This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by [113] Overfull \hbox (50.80455pt too wide) in paragraph at lines 9968--9968 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [114] [115] [116] [117] [118] Underfull \hbox (badness 10000) in paragraph at lines 10338--10340 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][][]@smallrm : [119] Overfull \hbox (102.54274pt too wide) in paragraph at lines 10397--10397 []@texttt boot.f:61: warning: type of 'ddot' does not match original declarati on [-Wlto-type-mismatch][] Overfull \hbox (125.53749pt too wide) in paragraph at lines 10416--10416 []@texttt rkpk2.f:77:5: warning: type of 'dstup' does not match original decla ration [-Wlto-type-mismatch][] Overfull \hbox (119.7888pt too wide) in paragraph at lines 10427--10427 []@texttt reg.f:78:33: warning: type of 'dqrdc' does not match original declar ation [-Wlto-type-mismatch][] Overfull \hbox (22.06111pt too wide) in paragraph at lines 10457--10457 []@texttt Warning: Type mismatch in argument 'jpvt' at (1); passed REAL(8) to INTEGER(4)[] [120] Chapter 5 [121] [122] [123] [124] [125] [126] [127] [128] [129] [130] Overfull \hbox (30.03963pt too wide) in paragraph at lines 11337--11337 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [131] [132] Overfull \hbox (39.30717pt too wide) in paragraph at lines 11501--11501 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [133] [134] [135] [136] [137] Overfull \hbox (16.31242pt too wide) in paragraph at lines 11935--11935 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] Underfull \hbox (badness 10000) in paragraph at lines 12945--12949 []@textrm (+20) Functions @texttt any_duplicated[] @textrm (+20) and @texttt an y_duplicated3[] @textrm (+20) are fast ver-sions of R's [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] Overfull \hbox (22.06111pt too wide) in paragraph at lines 14043--14043 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [161] Overfull \hbox (50.80455pt too wide) in paragraph at lines 14138--14138 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [162] Chapter 6 [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] Warning: unbalanced parentheses in @def... [180] [181] [182] [183] [184] [185] Underfull \hbox (badness 10000) in paragraph at lines 16184--16190 []@textrm (+20) The graph-ics sys-tems are ex-posed in head-ers @texttt R_ext/G raphicsEngine.h[]@textrm (+20) , @texttt R_ Chapter 7 [186] [187] Chapter 8 [188] [189] [190] Overfull \hbox (22.06111pt too wide) in paragraph at lines 16602--16602 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [191] Overfull \hbox (33.55849pt too wide) in paragraph at lines 16660--16660 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [192] [193] [194] [195] [196] [197] Underfull \hbox (badness 10000) in paragraph at lines 17178--17185 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm (+20) from an ad-min-i s-tra-tive in-stall and [198] [199] (Function and variable index) [200] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.vrs [201] [202] [203] [204]) (Concept index) [205] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-exts.cps [206]) [207] ) (see the transcript file for additional information) Output written on R-exts.pdf (213 pages, 1089837 bytes). Transcript written on R-exts.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-intro.texi @setfilename R-intro.info This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface) Cross reference values unknown; you must run TeX again. Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] Chapter 9 [38] [39] Chapter 10 [40] [41] [42] [43] [44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] Chapter 12 [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] Chapter 13 [74] [75] Chapter 14 [76] [77] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm (+20) Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\fil e[] @textrm (+20) and [78] Appendix A [79] [80] [81] Appendix B [82] [83] [84] [85] [86] [87] [88] Appendix C [89] [90] Appendix D [91] No file R-intro.vrs. Appendix E [92] No file R-intro.cps. Appendix F [93] [94] ) (see the transcript file for additional information) Output written on R-intro.pdf (97 pages, 585791 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.toc) (Preface) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] Chapter 9 [38] [39] Chapter 10 [40] [41] [42] [43] [44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] Chapter 12 [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] Chapter 13 [74] [75] Chapter 14 [76] [77] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm (+20) Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\fil e[] @textrm (+20) and [78] Appendix A [79] [80] [81] Appendix B [82] [83] [84] [85] [86] [87] [88] Appendix C [89] [90] Appendix D [91] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.vrs [92] [93]) Appendix E [94] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.cps [95]) Appendix F [96] [97] ) (see the transcript file for additional information) Output written on R-intro.pdf (103 pages, 642735 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.toc) (Preface) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] Chapter 3 [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19] [20] [21] [22] [23] [24] Chapter 6 [25] [26] [27] [28] Chapter 7 [29] [30] [31] Chapter 8 [32] [33] [34] [35] [36] [37] Chapter 9 [38] [39] Chapter 10 [40] [41] [42] [43] [44] [45] [46] [47] [48] Chapter 11 [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] Chapter 12 [61] [62] [63] [64] [65] [66] [67] [68] [69] [70] [71] [72] [73] Chapter 13 [74] [75] Chapter 14 [76] [77] Underfull \hbox (badness 10000) in paragraph at lines 6644--6649 []@textrm (+20) Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\fil e[] @textrm (+20) and [78] Appendix A [79] [80] [81] Appendix B [82] [83] [84] [85] [86] [87] [88] Appendix C [89] [90] Appendix D [91] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.vrs [92] [93]) Appendix E [94] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-intro.cps [95]) Appendix F [96] [97] ) (see the transcript file for additional information) Output written on R-intro.pdf (103 pages, 642748 bytes). Transcript written on R-intro.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-ints.texi @setfilename R-ints.info This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1499--1499 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1500--1500 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1501--1501 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1502--1502 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3973--3977 []@textrm (+20) If true, make use of the [][]@textbf (+20) codetools @textrm ( +20) (@texttt https:// CRAN. R-project. org/ [47] Underfull \hbox (badness 7595) in paragraph at lines 4007--4012 @textrm (+20) the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor- rect choice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] No file R-ints.vrs. (Concept index) [66] No file R-ints.cps. [67] ) (see the transcript file for additional information) Output written on R-ints.pdf (70 pages, 429192 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.toc [-1]) [-2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.toc) Chapter 1 (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1499--1499 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1500--1500 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1501--1501 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1502--1502 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3973--3977 []@textrm (+20) If true, make use of the [][]@textbf (+20) codetools @textrm ( +20) (@texttt https:// CRAN. R-project. org/ [47] Underfull \hbox (badness 7595) in paragraph at lines 4007--4012 @textrm (+20) the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor- rect choice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.vrs [66]) (Concept index) [67] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.cps) [68] ) (see the transcript file for additional information) Output written on R-ints.pdf (72 pages, 480979 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.toc [-1]) [-2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.toc) Chapter 1 (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1499--1499 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1500--1500 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1501--1501 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1502--1502 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [17] [18] [19] [20] [21] Chapter 2 [22] [23] [24] [25] [26] Chapter 3 [27] [28] Chapter 4 [29] [30] Chapter 5 [31] Chapter 6 [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] Underfull \hbox (badness 10000) in paragraph at lines 3973--3977 []@textrm (+20) If true, make use of the [][]@textbf (+20) codetools @textrm ( +20) (@texttt https:// CRAN. R-project. org/ [47] Underfull \hbox (badness 7595) in paragraph at lines 4007--4012 @textrm (+20) the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor- rect choice of [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] Chapter 9 [59] [60] Chapter 10 [61] Chapter 11 [62] Chapter 12 [63] [64] (Function and variable index) [65] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.vrs [66]) (Concept index) [67] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-ints.cps) [68] ) (see the transcript file for additional information) Output written on R-ints.pdf (72 pages, 480980 bytes). Transcript written on R-ints.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf R-lang.texi @setfilename R-lang.info This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-lang.cp Chapter 2 [1] [2] Cross reference values unknown; you must run TeX again. Overfull \hbox (7.14096pt too wide) in paragraph at lines 294--295 @textbf (-20) storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] Chapter 6 [30] [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 7186) in paragraph at lines 4356--4358 []@textrm (+20) Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] No file R-lang.vrs. (Concept Index) [52] No file R-lang.cps. Appendix A [53] [54] ) (see the transcript file for additional information) Output written on R-lang.pdf (57 pages, 349727 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.toc) Chapter 1 (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (7.14096pt too wide) in paragraph at lines 294--295 @textbf (-20) storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] Chapter 6 [30] [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 7186) in paragraph at lines 4356--4358 []@textrm (+20) Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.vrs [52]) (Concept Index) [53] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.cps) Appendix A [54] [55] ) (see the transcript file for additional information) Output written on R-lang.pdf (60 pages, 396017 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.24 (TeX Live 2022) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texlive/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2022-11-07.17]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/builddir/build/BUILD/R-4.3.1/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/builddir/build/BUILD/R-4.3.1/doc/manual/R-defs.texi (/usr/share/texlive/texmf-dist/tex/texinfo/txi-en.tex)) (/builddir/build/BUILD/R-4.3.1/doc/manual/version.texi) [1{/usr/share/texlive/t exmf-var/fonts/map/pdftex/updmap/pdftex.map}] [2] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.toc [-1] [-2]) [-3] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.toc) (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.toc) Chapter 1 (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (7.14096pt too wide) in paragraph at lines 294--295 @textbf (-20) storage.mode| [3] [4] [5] [6] [7] Chapter 3 [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] Chapter 4 [21] [22] [23] [24] Chapter 5 [25] [26] [27] [28] [29] Chapter 6 [30] [31] [32] [33] [34] [35] [36] [37] [38] Chapter 7 [39] Chapter 8 [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] Underfull \hbox (badness 7186) in paragraph at lines 4356--4358 []@textrm (+20) Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46] [47] [48] [49] [50] (Function and Variable Index) [51] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.vrs [52]) (Concept Index) [53] (/builddir/build/BUILD/R-4.3.1/doc/manual/R-lang.cps) Appendix A [54] [55] ) (see the transcript file for additional information) Output written on R-lang.pdf (60 pages, 396020 bytes). Transcript written on R-lang.log. make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc' + make compact-pdf make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/manual' compacting PDF manuals in doc/manual make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/manual' + make info make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/manual' /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-FAQ.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-admin.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-data.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-exts.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-intro.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-ints.texi /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I. R-lang.texi make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc' + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-intro.info.utf8 doc/manual/R-intro.info + mv doc/manual/R-intro.info.utf8 doc/manual/R-intro.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-FAQ.info.utf8 doc/manual/R-FAQ.info + mv doc/manual/R-FAQ.info.utf8 doc/manual/R-FAQ.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/FAQ.utf8 doc/FAQ + mv doc/FAQ.utf8 doc/FAQ + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-admin.info.utf8 doc/manual/R-admin.info + mv doc/manual/R-admin.info.utf8 doc/manual/R-admin.info + for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1 + iconv -f iso-8859-1 -t utf-8 -o doc/manual/R-exts.info-1.utf8 doc/manual/R-exts.info-1 + mv doc/manual/R-exts.info-1.utf8 doc/manual/R-exts.info-1 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.0M4Cju + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64 ++ dirname /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.3.1 + make DESTDIR=/builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64 install install-pdf install-info mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/m4' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/m4' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/tools' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tools' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc' installing doc ... mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/doc/R mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/man/man1 make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/html' installing doc/html ... mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/doc/R/html make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/html' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/manual' installing doc/manual ... mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/doc/R/manual mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/doc/R/manual/images make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/manual' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/etc' mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/etc installing etc ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/etc' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/share' installing share ... mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/R mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/dictionaries mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/encodings mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/java mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/licenses mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/make mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/Rd mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/Rd/macros mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/sh mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/texmf mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/texmf/bibtex/bib mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/texmf/bibtex/bst mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/texmf/tex/latex make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/share' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/scripts' mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/bin mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/scripts' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/include' mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/include/R make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/include/R_ext' mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/include/R/R_ext make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/include/R_ext' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/include' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/extra' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/extra/blas' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/extra/blas' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/extra/tre' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/extra/tre' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/extra/tzone' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/extra/tzone' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/extra/xdr' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/extra/xdr' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/extra/intl' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/extra/intl' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/extra' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/appl' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/appl' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/nmath' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/nmath' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/unix' gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -DR_HOME='"/usr/lib64/R"' \ -o Rscript ./Rscript.c mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/pkgconfig make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/unix' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/main' mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/exec make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/main' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/main' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/main' mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/lib make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/main' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/main' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/internet' mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/modules make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/internet' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/lapack' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/lapack' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/modules/X11' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules/X11' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/modules' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/library' mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library installing packages ... building HTML index ... make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/library' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/manual' installing R manuals in PDF format ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/manual' make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/doc/manual' mkdir -p -- /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/info /usr/bin/install -c -m 644 "./dir" "/builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/info" installing R info pages ... updating '/usr/share/info/dir' ... make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/doc/manual' + rm -f /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/info/dir + mkdir -p /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/doc/R + install -p CAPABILITIES /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/doc/R + cd src/nmath/standalone + make install DESTDIR=/builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64 make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/src/include' make[1]: 'Rmath.h' is up to date. make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/src/include' + mkdir -p /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/etc/ld.so.conf.d + echo /usr/lib64/R/lib + mkdir -p /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/library + touch -r README /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/doc/R/CAPABILITIES + touch -r README doc/manual/R-FAQ.pdf doc/manual/R-admin.pdf doc/manual/R-data.pdf doc/manual/R-exts.pdf doc/manual/R-intro.pdf doc/manual/R-ints.pdf doc/manual/R-lang.pdf doc/manual/fullrefman.pdf + touch -r README /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/bin/R + sed -i 's|\..\/\..|/usr/lib64/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/doc/R/html/packages.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/bkde.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/bkde2D.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/bkfe.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/dpih.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/dpik.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/dpill.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/html/locpoly.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Aids2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Animals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Boston.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Cars93.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Cushings.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/DDT.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/GAGurine.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Insurance.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/MASS-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Melanoma.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Null.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/OME.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Pima.tr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Rabbit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Rubber.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/SP500.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Sitka.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Sitka89.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Skye.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/Traffic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/UScereal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/UScrime.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/VA.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/abbey.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/accdeaths.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/addterm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/anorexia.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/anova.negbin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/area.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/bacteria.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/bandwidth.nrd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/bcv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/beav1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/beav2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/biopsy.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/birthwt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/boxcox.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cabbages.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/caith.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cats.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cement.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/chem.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/con2tr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/confint.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/contr.sdif.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/coop.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/corresp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cov.rob.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cov.trob.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/cpus.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/crabs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/deaths.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/denumerate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/dose.p.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/drivers.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/dropterm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/eagles.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/epil.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/eqscplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/farms.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/fgl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/fitdistr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/forbes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/fractions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/galaxies.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/gamma.dispersion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/gamma.shape.glm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/gehan.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/genotype.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/geyser.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/gilgais.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/ginv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/glm.convert.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/glm.nb.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/glmmPQL.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/hills.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/hist.scott.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/housing.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/huber.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/hubers.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/immer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/isoMDS.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/kde2d.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/lda.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/ldahist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/leuk.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/lm.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/lm.ridge.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/loglm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/loglm1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/logtrans.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/lqs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/mammals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/mca.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/mcycle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/menarche.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/michelson.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/minn38.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/motors.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/muscle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/mvrnorm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/negative.binomial.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/newcomb.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/nlschools.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/npk.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/npr1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/oats.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/painters.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/pairs.lda.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/parcoord.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/petrol.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/phones.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/plot.lda.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/plot.mca.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/plot.profile.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/polr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.glmmPQL.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.lda.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.lqs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.mca.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/predict.qda.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/profile.glm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/qda.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/quine.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rational.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/renumerate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rlm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rms.curv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rnegbin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/road.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/rotifer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/sammon.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/ships.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/shoes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/shrimp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/shuttle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/snails.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/stdres.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/steam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/stepAIC.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/stormer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/studres.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/summary.loglm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/summary.negbin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/summary.rlm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/survey.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/synth.tr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/theta.md.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/topo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/truehist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/ucv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/waders.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/whiteside.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/width.SJ.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/write.matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/html/wtloss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/BunchKaufman-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/CAex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/CHMfactor-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Cholesky-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Cholesky.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/CsparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Diagonal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Hilbert.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/KNex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/KhatriRao.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/LU-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Matrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Matrix-defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Matrix-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/MatrixClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/MatrixFactorization-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/RsparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Schur-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Schur.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/SparseM-conv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Subassign-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/TsparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/USCounties.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/Xtrct-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/abIndex-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/abIseq.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/all-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/all.equal-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/atomicVector-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/band.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/bandSparse.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/bdiag.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/boolean-matprod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/cBind.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/chol.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/chol2inv-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/colSums.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/compMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/condest.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ddenseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ddiMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/denseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dgCMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dgRMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dgTMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dgeMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/diagU2N.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/diagonalMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dimScale.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dmperm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dpoMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/drop0.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dsCMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dsRMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dsparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dsyMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dtCMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dtRMatrix-class-def.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dtpMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/dtrMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/expand.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/expm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/externalFormats.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/facmul.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/fastMisc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/forceSymmetric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/formatSparseM.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/generalMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/graph2T.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/image-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/indMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/index-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/invPerm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/is.na-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/is.null.DN.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/isSymmetric-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/isTriangular.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/kronecker-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ldenseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ldiMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/lgeMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/lsparseMatrix-classes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/lsyMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ltrMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/lu.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/mat2triplet.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/matrix-products.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ndenseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nearPD.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ngeMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nnzero.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/norm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nsparseMatrix-classes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/nsyMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/ntrMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/number-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/pMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/packedMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/printSpMatrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/qr-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rankMatrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rcond.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rep2abI.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/replValue-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rleDiff-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/rsparsematrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/solve-methods.html + for i in 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/builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseMatrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseQR-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseVector-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/sparseVector.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/symmetricMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/symmpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/triangularMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/uniqTsparse.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/unpack.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/unpackedMatrix-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/unused-classes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/updown.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/Matrix/html/wrld_1deg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Arithmetic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/AsIs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Bessel.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/CallExternal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Colon.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Comparison.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Constants.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Control.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Cstack_info.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/DateTimeClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Dates.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Deprecated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Encoding.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/EnvVar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Extract.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Extract.factor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Extract.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Extremes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Foreign-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Foreign.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Hyperbolic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ISOdatetime.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/InternalMethods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/La_library.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/La_version.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Last.value.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Log.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Logic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/LongVectors.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/MathFun.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Memory-limits.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Memory.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/NA.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/NULL.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/NumericConstants.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Ops.Date.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Paren.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Platform.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Primitive.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Quotes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Random-user.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Random.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/RdUtils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Recall.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Reserved.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Rhome.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Round.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/S3method.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Signals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Special.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/StackOverflows.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Startup.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Syntax.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.getenv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.getpid.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.glob.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.info.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.localeconv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.readlink.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.setFileTime.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.setenv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.sleep.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.time.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Sys.which.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Trig.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/UTF8filepaths.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/UseMethod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Vectorize.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/Version.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/abbreviate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/agrep.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/all.equal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/all.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/allnames.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/any.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/aperm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/append.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/apply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/args.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/array.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/array2DF.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.Date.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.POSIXlt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.environment.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/as.function.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/asplit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/assign.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/assignOps.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/attach.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/attr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/attributes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/autoload.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/backsolve.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/balancePOSIXlt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/base-defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/base-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/base-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/base-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/basename.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/bincode.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/bindenv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/bitwise.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/body.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/bquote.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/browser.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/browserText.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/builtins.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/by.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/c.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/call.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/callCC.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/capabilities.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cbind.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/char.expand.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/character.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/charmatch.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/chartr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/chkDots.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/chol.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/chol2inv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/chooseOpsMethod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/col.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/colSums.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/colnames.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/commandArgs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/comment.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/complex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/conditions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/conflicts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/connections.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/contributors.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/copyright.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/crossprod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cumsum.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/curlGetHeaders.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cut.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/cut.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/data.class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/data.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/data.matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dataframeHelpers.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/date.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dcf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/debug.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/delayedAssign.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/deparse.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/deparseOpts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/det.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/detach.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dev.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/diag.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/diff.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/difftime.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dim.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dimnames.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/do.call.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dontCheck.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dots.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/double.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dput.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/drop.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/droplevels.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dump.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/duplicated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/dynload.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/eapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/eigen.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/encodeString.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/environment.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/eval.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/exists.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/expand.grid.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/expression.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/extSoftVersion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/factor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.access.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.choose.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.info.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.path.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/file.show.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/files.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/files2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/find.package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/findInterval.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/force.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/forceAndCall.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/formals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/format.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/format.info.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/format.pval.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/formatDL.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/formatc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/function.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/funprog.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gc.time.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gctorture.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/get.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getCallingDLL.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getDLLRegisteredRoutines.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getLoadedDLLs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getNativeSymbolInfo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gettext.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/getwd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/grep.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/grepRaw.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/groupGeneric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/grouping.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/gzcon.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/hexmode.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/iconv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/icuSetCollate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/identical.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/identity.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ifelse.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/integer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/interaction.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/interactive.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/invisible.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.finite.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.function.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.language.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.recursive.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.single.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/is.unsorted.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/isR.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/isS4.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/isSymmetric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/jitter.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/kappa.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/kronecker.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/l10n_info.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/labels.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/lapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/lazyload.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/length.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/lengths.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/levels.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/libPaths.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/libcurlVersion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/library.dynam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/library.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/license.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/list.files.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/list.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/list2DF.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/list2env.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/load.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/locales.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/logical.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/lower.tri.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/make.names.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/make.unique.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/marginSums.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mat.or.vec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/match.arg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/match.call.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/match.fun.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/match.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/matmult.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/maxCol.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mean.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/memCompress.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/memlimits.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/memory.profile.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/merge.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/message.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/missing.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mode.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/mtfrm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/name.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/names.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/nargs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/nchar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/nlevels.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/noquote.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/norm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/normalizePath.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/notyet.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/nrow.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-dblcolon.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-hooks.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-load.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-reflect.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/ns-topenv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/numeric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/numeric_version.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/octmode.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/on.exit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/options.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/order.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/outer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/parse.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/paste.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/path.expand.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pcre_config.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pipeOp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/plot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pmatch.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/polyroot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pos.to.env.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pretty.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/print.dataframe.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/print.default.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/print.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/prmatrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/proc.time.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/prod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/proportions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/pushBack.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/qr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/qraux.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/quit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/range.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rank.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/raw.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rawConnection.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rawConversion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readBin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readChar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readLines.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readRDS.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readRenviron.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/readline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/reg.finalizer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/regex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/regmatches.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rep.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/replace.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rev.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/round.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/row.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/row.names.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/rowsum.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sQuote.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sample.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/save.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/scale.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/scan.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/search.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/seek.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/seq.Date.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/seq.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/seq.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sequence.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/serialize.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/setTimeLimit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sets.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/shQuote.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/showConnections.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sign.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sink.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/slice.index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/slotOp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/socketSelect.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/solve.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sort.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/source.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/split.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sprintf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/srcfile.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/standardGeneric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/startsWith.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/stop.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/stopifnot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strptime.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strrep.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strsplit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strtoi.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strtrim.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/structure.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/strwrap.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/subset.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/substitute.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/substr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sum.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/summary.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/svd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sweep.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/switch.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sys.parent.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/sys.source.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/system.file.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/system.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/system.time.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/system2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/t.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/table.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tabulate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/taskCallback.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/taskCallbackManager.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/taskCallbackNames.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tempfile.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/textconnections.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tilde.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/timezones.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/toString.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/trace.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/traceback.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/tracemem.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/transform.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/trimws.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/try.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/typeof.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/unique.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/units.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/unlink.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/unlist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/unname.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/userhooks.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/utf8Conversion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/validUTF8.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/vector.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/warning.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/warnings.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/weekday.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/which.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/which.min.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/with.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/withVisible.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/write.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/writeLines.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/xtfrm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zMachine.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zScript.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zapsmall.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zpackages.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/base/html/zutils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/EEF.profile.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/Imp.Estimates.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/abc.ci.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/acme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/aids.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/aircondit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/amis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/aml.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/beaver.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/bigcity.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/boot-practicals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/boot.array.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/boot.ci.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/boot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/brambles.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/breslow.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/calcium.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cane.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/capability.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/catsM.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cav.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cd4.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cd4.nested.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/censboot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/channing.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/claridge.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cloth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/co.transfer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/coal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/control.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/corr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cum3.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/cv.glm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/darwin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/dogs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/downs.bc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/ducks.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/empinf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/envelope.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/exp.tilt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/fir.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/freq.array.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/frets.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/glm.diag.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/glm.diag.plots.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/gravity.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/hirose.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/imp.weights.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/inv.logit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/islay.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/jack.after.boot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/k3.linear.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/linear.approx.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/lines.saddle.distn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/logit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/manaus.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/melanoma.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/motor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/neuro.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/nitrofen.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/nodal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/norm.ci.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/nuclear.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/paulsen.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/plot.boot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/poisons.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/polar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/print.boot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/print.bootci.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/print.saddle.distn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/print.simplex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/remission.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/saddle.distn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/saddle.distn.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/saddle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/salinity.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/simplex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/simplex.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/smooth.f.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/sunspot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/survival.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/tau.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/tilt.boot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/tsboot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/tuna.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/urine.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/var.linear.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/boot/html/wool.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/SOM.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/batchSOM.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/condense.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/knn.cv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/knn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/knn1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvq1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvq2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvq3.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvqinit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/lvqtest.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/multiedit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/olvq1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/reduce.nn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/class/html/somgrid.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/agnes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/agnes.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/agriculture.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/animals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/bannerplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/chorSub.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clara.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clara.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clusGap.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clusplot.default.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/clusplot.partition.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/cluster-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/coef.hclust.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/daisy.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/diana.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/dissimilarity.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/ellipsoidhull.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/fanny.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/fanny.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/flower.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/lower.to.upper.tri.inds.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/medoids.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/mona.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/mona.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/pam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/pam.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/partition.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plantTraits.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plot.agnes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plot.diana.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plot.mona.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/plot.partition.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/pltree.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/pluton.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/predict.ellipsoid.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.agnes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.clara.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.diana.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.dissimilarity.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.fanny.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.mona.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/print.pam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/ruspini.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/silhouette.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/sizeDiss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.agnes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.clara.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.diana.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.mona.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/summary.pam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/twins.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/volume.ellipsoid.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/votes.repub.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/cluster/html/xclara.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/checkUsage.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/codetools.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/findGlobals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/codetools/html/showTree.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/compiler/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/compiler/html/compile.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/AirPassengers.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/BJsales.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/BOD.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/ChickWeight.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/DNase.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/EuStockMarkets.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Formaldehyde.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/HairEyeColor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Harman23.cor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Harman74.cor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Indometh.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/InsectSprays.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/JohnsonJohnson.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/LakeHuron.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/LifeCycleSavings.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Loblolly.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Nile.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Orange.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/OrchardSprays.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/PlantGrowth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Puromycin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Theoph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/Titanic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/ToothGrowth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/UCBAdmissions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/UKDriverDeaths.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/UKLungDeaths.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/UKgas.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/USAccDeaths.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/USArrests.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/USJudgeRatings.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/USPersonalExpenditure.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/VADeaths.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/WWWusage.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/WorldPhones.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/ability.cov.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/airmiles.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/airquality.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/anscombe.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/attenu.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/attitude.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/austres.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/beavers.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/cars.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/chickwts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/co2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/crimtab.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/datasets-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/discoveries.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/esoph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/euro.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/eurodist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/faithful.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/freeny.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/infert.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/iris.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/islands.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/lh.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/longley.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/lynx.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/morley.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/mtcars.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/nhtemp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/nottem.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/npk.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/occupationalStatus.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/precip.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/presidents.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/pressure.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/quakes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/randu.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/rivers.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/rock.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/sleep.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/stackloss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/state.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/sunspot.month.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/sunspot.year.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/sunspots.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/swiss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/treering.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/trees.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/uspop.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/volcano.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/warpbreaks.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/women.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/datasets/html/zCO2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/lookup.xport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.S.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.arff.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.dbf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.dta.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.epiinfo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.mtp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.octave.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.spss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.ssd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.systat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/read.xport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/write.arff.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/write.dbf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/write.dta.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/foreign/html/write.foreign.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/Devices.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/Hershey.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/Japanese.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/Type1Font.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/adjustcolor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/as.graphicsAnnot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/as.raster.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/axisTicks.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/boxplot.stats.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/bringToTop.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/cairo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/cairoSymbolFont.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/check.options.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/chull.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/cm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/col2rgb.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/colorRamp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/colors.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/contourLines.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/convertColor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/densCols.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.capabilities.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.capture.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.flush.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.interactive.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev.size.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/dev2bitmap.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/devAskNewPage.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/embedFonts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/extendrange.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/getGraphicsEvent.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/glyphInfo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/grDevices-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/grDevices-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/grSoftVersion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/gray.colors.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/gray.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/hcl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/hsv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/make.rgb.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/msgWindow.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/n2mfrow.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/nclass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/palette.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/palettes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/pdf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/pdf.options.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/pictex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/plotmath.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/png.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/postscript.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/postscriptFonts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/pretty.Date.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/ps.options.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/quartz.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/quartzFonts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/recordGraphics.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/recordplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/rgb.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/rgb2hsv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/savePlot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/trans3d.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/windows.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/windows.options.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/windowsFonts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/x11.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/x11Fonts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/xfig.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/xy.coords.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/xyTable.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grDevices/html/xyz.coords.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/abline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/arrows.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/assocplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/axTicks.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/axis.POSIXct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/axis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/barplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/box.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/boxplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/boxplot.matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/bxp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/cdplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/clip.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/contour.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/convertXY.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/coplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/curve.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/dotchart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/filled.contour.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/fourfoldplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/graphics-defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/graphics-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/grid.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/hist.POSIXt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/hist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/identify.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/image.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/layout.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/legend.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/lines.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/locator.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/matplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/mosaicplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/mtext.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/pairs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/panel.smooth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/par.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/persp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/pie.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.dataframe.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.default.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.design.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.factor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.formula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.raster.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.table.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.window.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plot.xy.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/plothistogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/points.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/polygon.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/polypath.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/rasterImage.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/rect.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/rug.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/screen.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/segments.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/smoothScatter.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/spineplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/stars.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/stem.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/stripchart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/strwidth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/sunflowerplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/symbols.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/text.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/title.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/units.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/xspline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/graphics/html/zAxis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/Grid.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/absolute.size.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/arrow.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/as.mask.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/calcStringMetric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/current.viewport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/dataViewport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/depth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/deviceLoc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/drawDetails.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/editDetails.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/editViewport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/explode.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/gEdit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/gPath.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/getNames.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/gpar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid-defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.DLapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.add.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.bezier.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.cap.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.circle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.clip.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.convert.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.copy.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.curve.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.delay.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.display.list.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.draw.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.edit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.force.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.function.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.get.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.glyph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.grab.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.grep.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.grill.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.grob.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.group.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.layout.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.lines.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.locator.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.ls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.move.to.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.newpage.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.null.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.pack.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.path.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.place.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.plot.and.legend.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.points.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.polygon.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.pretty.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.raster.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.record.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.rect.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.refresh.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.remove.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.reorder.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.roundrect.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.segments.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.set.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.show.layout.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.show.viewport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.stroke.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.text.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.xaxis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.xspline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grid.yaxis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/gridCoords.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grobCoords.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grobName.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grobWidth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/grobX.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/legendGrob.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/makeContent.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/patterns.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/plotViewport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/resolveRasterSize.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/showGrob.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/showViewport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/stringWidth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.c.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.length.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.pmin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unit.rep.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/unitType.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/valid.just.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/validDetails.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/viewport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/viewportTransform.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/viewports.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/vpPath.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/widthDetails.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/xDetails.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/grid/html/xsplinePoints.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/Lattice.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/Rows.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/USMortality.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/axis.default.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/banking.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/barchart.table.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/barley.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/cloud.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/draw.colorkey.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/draw.key.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/environmental.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/ethanol.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/histogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/interaction.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/lattice.options.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/latticeParseFormula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/level.colors.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/levelplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/llines.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/lset.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/make.groups.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/melanoma.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/oneway.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/packet.panel.default.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.axis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.barchart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.bwplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.cloud.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.densityplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.dotplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.functions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.histogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.levelplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.loess.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.number.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.pairs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.parallel.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.qqmath.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.qqmathline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.smoothScatter.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.spline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.stripplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.superpose.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.violin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/panel.xyplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/prepanel.default.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/prepanel.functions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/print.trellis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/qq.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/qqmath.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/rfs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/shingles.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/simpleKey.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/simpleTheme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/singer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/splom.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/standard.theme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/strip.default.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/tmd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/trellis.device.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/trellis.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/trellis.par.get.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/update.trellis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/utilities.3d.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/xyplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/lattice/html/xyplot.ts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/BasicClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Classes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Classes_Details.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Documentation.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/EmptyMethodsList-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/EnvironmentClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/GenericFunctions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Introduction.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/LanguageClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/LinearMethodsList-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodDefinition-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodSupport.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodWithNext-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodsList-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/MethodsList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Methods_Details.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Methods_for_Nongenerics.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/Methods_for_S3.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/NextMethod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/ObjectsWithPackage-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/RClassUtils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/RMethodUtils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/S3Part.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/S4groupGeneric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/SClassExtension-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/StructureClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/TraceClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/as.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/callGeneric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/canCoerce.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/cbind2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/className.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/classRepresentation-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/classesToAM.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/dotsMethods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/evalSource.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/findClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/findMethods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/fixPrevious.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/genericFunction-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/getClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/getMethod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/getPackageName.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/hasArg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/implicitGeneric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/inheritedSlotNames.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/initialize-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/is.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/isSealedMethod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/languageEl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/localRefClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/method.skeleton.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/methodUtilities.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/methods-defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/methods-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/methods-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/new.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/nonStructure-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/promptClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/promptMethods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/refClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/removeMethod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/representation.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/selectSuperClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setAs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setClassUnion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setGeneric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setGroupGeneric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setIs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setLoadActions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setMethod.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setOldClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/setSClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/show.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/showMethods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/signature-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/slot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/stdRefClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/substituteDirect.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/testInheritedMethods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/validObject.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/methods/html/zBasicFunsList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Beta.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/FFdes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Predict.matrix.cr.smooth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Predict.matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Predict.matrix.soap.film.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Rrank.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Sl.initial.repara.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Sl.repara.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Sl.setup.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/Tweedie.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/XWXd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/anova.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/bam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/bam.update.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/bandchol.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/blas.thread.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/bug.reports.mgcv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/cSplineDes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/chol.down.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/choose.k.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/cnorm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/columb.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/concurvity.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/coxpht.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/dDeta.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/dpnorm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/exclude.too.far.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/extract.lme.cov.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/factor.smooth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/family.mgcv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/fix.family.link.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/fixDependence.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/formXtViX.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/formula.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/fs.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/full.score.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.check.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.control.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.convergence.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.fit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.fit3.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.fit5.post.proc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.mh.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.models.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.outer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.reparam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.scale.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.selection.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.side.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam.vcomp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gam2objective.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamObject.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamSim.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamlss.etamu.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamlss.gH.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gamm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gammals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gaulss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/get.var.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gevlss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ginla.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/gumbls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/identifiability.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/in.out.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/inSide.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/influence.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/initial.sp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/interpret.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/jagam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/k.check.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ldTweedie.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ldetS.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/linear.functional.terms.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/logLik.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ls.size.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/magic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/magic.post.proc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mgcv-FAQ.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mgcv-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mgcv-parallel.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mini.roots.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/missing.data.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/model.matrix.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mono.con.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mroot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/multinom.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/mvn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/negbin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/new.name.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/notExp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/notExp2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/null.space.dimension.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ocat.html + for i in 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/builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/pdTens.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/pen.edf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/place.knots.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/plot.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/polys.plot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/predict.bam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/predict.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/print.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/psum.chisq.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/qq.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/rTweedie.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/random.effects.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/residuals.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/rig.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/rmvn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/s.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/scat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/sdiag.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/shash.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/single.index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/slanczos.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.ad.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.bs.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.cr.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.ds.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.fs.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.gp.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.mrf.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.ps.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.re.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.so.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.sos.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.sz.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.t2.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.tensor.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.construct.tp.smooth.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.info.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth.terms.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/smooth2random.html + for i in 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/builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/step.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/summary.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/t2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/te.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/tensor.prod.model.matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/totalPenaltySpace.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/trichol.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/trind.generator.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/twlss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/uniquecombs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/vcov.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/vis.gam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ziP.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/html/ziplss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ACF.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ACF.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ACF.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Alfalfa.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Assay.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/BodyWeight.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Cefamandole.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Coef.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Covariate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Covariate.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dialyzer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dim.corSpatial.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dim.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dim.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Dim.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Earthquake.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Extract.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Fatigue.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Gasoline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Glucose.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Glucose2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Gun.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/IGF.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Initialize.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/LDEsysMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Machines.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/MathAchSchool.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/MathAchieve.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Matrix.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Matrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Meat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Milk.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Muscle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.formula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.pdBlocked.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Names.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Nitrendipene.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Oats.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Orthodont.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Ovary.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Oxboys.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Oxide.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/PBG.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Phenobarb.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Pixel.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Quinidine.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Rail.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/RatPupWeight.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Relaxin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Remifentanil.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Soybean.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Spruce.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Tetracycline1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Tetracycline2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/VarCorr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corExp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corGaus.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corLin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corRatio.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corSpatial.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.corSpher.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.default.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Variogram.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Wafer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Wheat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/Wheat2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/allCoef.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/anova.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/anova.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/as.matrix.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/as.matrix.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/as.matrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/asOneFormula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/asTable.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/augPred.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/balancedGrouped.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/bdf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.gnls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/coef.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/collapse.groupedData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/collapse.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/compareFits.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/comparePred.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corAR1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corARMA.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corCAR1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corCompSymm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corExp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corFactor.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corFactor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corGaus.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corLin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corMatrix.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corMatrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corMatrix.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corMatrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corNatural.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corRatio.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corSpatial.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corSpher.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/corSymm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ergoStool.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fdHess.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.gnlsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fitted.nlmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fixed.effects.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/fixef.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/formula.pdBlocked.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/formula.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/formula.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariate.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariate.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariate.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getCovariateFormula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getData.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getData.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getData.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroups.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getGroupsFormula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getResponse.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getResponseFormula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/getVarCov.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gls-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/glsControl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/glsObject.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gnls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gnlsControl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gnlsObject.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gnlsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/groupedData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/gsummary.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/intervals.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/intervals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/intervals.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/intervals.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/isBalanced.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/isInitialized.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmList.groupedData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lme.groupedData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lme.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmeControl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmeObject.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logDet.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logDet.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logDet.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logDet.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.gnls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.gnlsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/logLik.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/model.matrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/needUpdate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/needUpdate.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlme-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlme.nlsList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlmeControl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlmeObject.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlsList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/nlsList.selfStart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pairs.compareFits.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pairs.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pairs.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdBlocked.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdCompSymm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdConstruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdConstruct.pdBlocked.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdDiag.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdFactor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdFactor.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdIdent.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdLogChol.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdMatrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdMatrix.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdNatural.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pdSymm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/phenoModel.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.ACF.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.Variogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.augPred.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.compareFits.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.intervals.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.nffGroupedData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.nfnGroupedData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.nmGroupedData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.ranef.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/plot.ranef.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/pooledSD.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.gnls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/predict.nlme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/print.summary.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/print.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/qqnorm.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/qqnorm.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/quinModel.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/random.effects.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ranef.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/ranef.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/recalc.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.gnlsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/residuals.nlmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/simulate.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/solve.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/solve.reStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/splitFormula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.corStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.lmList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.lme.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.nlsList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.pdMat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/summary.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/update.modelStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/update.varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varComb.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varConstPower.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varConstProp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varExp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varFixed.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varFunc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varIdent.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varPower.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varWeights.glsStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varWeights.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nlme/html/varWeights.lmeStruct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/class.ind.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/multinom.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/nnet.Hess.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/nnet.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/predict.nnet.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/nnet/html/which.is.max.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/RngStream.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/children.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/clusterApply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/detectCores.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/makeCluster.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/mcaffinity.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/mcfork.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/mclapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/mcparallel.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/parallel-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/pvec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/parallel/html/splitIndices.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/car.test.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/car90.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/cu.summary.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/kyphosis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/labels.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/meanvar.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/na.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/path.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/plot.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/plotcp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/post.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/predict.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/print.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/printcp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/prune.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/residuals.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart.control.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart.exp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rpart.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/rsq.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/snip.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/solder.balance.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/stagec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/summary.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/text.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/rpart/html/xpred.rpart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Kaver.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Kenvl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Kfn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Psim.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/SSI.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/Strauss.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/anova.trls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/correlogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/expcov.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/ppgetregion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/ppinit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/pplik.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/ppregion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/predict.trls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/prmat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/semat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/surf.gls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/surf.ls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/trls.influence.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/trmat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/html/variogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/asVector.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/backSpline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/bs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/interpSpline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/ns.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/periodicSpline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/polySpline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/predict.bSpline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/predict.bs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/splineDesign.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/splineKnots.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/splineOrder.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/splines-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/html/xyVector.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/AIC.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ARMAacf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ARMAtoMA.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Beta.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Binomial.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Cauchy.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Chisquare.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Distributions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Exponential.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Fdist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/GammaDist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Geometric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/HoltWinters.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Hypergeometric.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/IQR.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/KalmanLike.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Logistic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Lognormal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Multinom.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NLSstAsymptotic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NLSstClosestX.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NLSstLfAsymptote.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NLSstRtAsymptote.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/NegBinomial.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Normal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Pair.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Poisson.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSD.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSasymp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSasympOff.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSasympOrig.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSbiexp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSfol.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSfpl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSgompertz.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSlogis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSmicmen.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SSweibull.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/SignRank.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Smirnov.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/StructTS.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/TDist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Tukey.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/TukeyHSD.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Uniform.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Weibull.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/Wilcoxon.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/acf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/acf2AR.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/add1.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/addmargins.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/aggregate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/alias.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/anova.glm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/anova.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/anova.lm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/anova.mlm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ansari.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/aov.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/approxfun.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ar.ols.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/arima.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/arima.sim.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/arima0.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/as.hclust.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/asOneSidedFormula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ave.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/bandwidth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/bartlett.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/binom.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/biplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/biplot.princomp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/birthday.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/box.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cancor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/case.names.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/checkMFClasses.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/chisq.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cmdscale.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/coef.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/complete.cases.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/confint.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/constrOptim.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/contrast.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/contrasts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/convolve.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cophenetic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cor.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cov.wt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cpgram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/cutree.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/decompose.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/delete.response.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/dendrapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/dendrogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/density.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/deriv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/deviance.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/df.residual.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/diffinv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/dist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/dummy.coef.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ecdf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/eff.aovlist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/effects.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/embed.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/expand.model.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/extractAIC.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/factanal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/factor.scope.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/family.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fft.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/filter.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fisher.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fitted.values.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fivenum.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/fligner.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/formula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/formula.nls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/friedman.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ftable.formula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ftable.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/getInitial.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/glm.control.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/glm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/glm.summaries.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/hclust.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/heatmap.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/identify.hclust.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/influence.measures.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/integrate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/interaction.plot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/is.empty.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/isoreg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/kernapply.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/kernel.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/kmeans.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/kruskal.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ks.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ksmooth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lag.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lag.plot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/line.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/listof.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lm.influence.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lm.summaries.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lmfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/loadings.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/loess.control.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/loess.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/logLik.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/loglin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lowess.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ls.diag.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ls.print.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/lsfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mad.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mahalanobis.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/make.link.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/makepredictcall.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/manova.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mantelhaen.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mauchly.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mcnemar.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/median.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/medpolish.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/model.extract.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/model.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/model.matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/model.tables.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/monthplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/mood.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/na.action.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/na.contiguous.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/na.fail.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nafns.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/naprint.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nextn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nlm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nlminb.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nls.control.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/nobs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/numericDeriv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/offset.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/oneway.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/optim.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/optimize.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/order.dendrogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/p.adjust.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pairwise.prop.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pairwise.t.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pairwise.table.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pairwise.wilcox.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.HoltWinters.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.acf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.density.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.isoreg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.lm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.ppr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.profile.nls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.spec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.stepfun.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/plot.ts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/poisson.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/poly.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/power.anova.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/power.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/power.prop.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/power.t.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/pp.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ppoints.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ppr.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/prcomp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.HoltWinters.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.arima.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.glm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.lm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.loess.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.nls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/predict.smooth.spline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/preplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/princomp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/print.power.htest.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/print.ts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/printCoefmat.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/profile.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/profile.nls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/proj.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/prop.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/prop.trend.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/qqnorm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/quade.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/quantile.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/r2dtable.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/rWishart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/read.ftable.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/rect.hclust.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/relevel.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/reorder.dendrogram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/reorder.factor.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/replications.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/reshape.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/residuals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/runmed.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/scatter.smooth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/screeplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/sd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/se.contrast.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/selfStart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/setNames.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/shapiro.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/sigma.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/simulate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/smooth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/smooth.spline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/smoothEnds.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/sortedXyData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/spec.ar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/spec.pgram.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/spec.taper.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/spectrum.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/splinefun.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/start.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stat.anova.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stats-defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stats-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stats-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/step.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stepfun.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/stlmethods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.aov.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.glm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.lm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.manova.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.nls.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/summary.princomp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/supsmu.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/symnum.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/t.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/termplot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/terms.formula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/terms.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/terms.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/time.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/toeplitz.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ts-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ts.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ts.plot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/ts.union.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/tsSmooth.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/tsdiag.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/tsp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/uniroot.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/update.formula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/update.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/var.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/varimax.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/vcov.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/weighted.mean.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/weighted.residuals.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/weights.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/wilcox.test.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/window.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/xtabs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/html/zC.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/coef-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/confint-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/logLik-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/mle-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/mle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/plot-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/profile-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/profile.mle-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/show-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/stats4-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/summary-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/summary.mle-class.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/update-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats4/html/vcov-methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/Surv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/Surv2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/Surv2data.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/Survmethods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/aareg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/aeqSurv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/aggregate.survfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/agreg.fit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/aml.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/anova.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/attrassign.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/basehaz.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/bladder.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/blogit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cch.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cgd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cgd0.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cipoisson.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/clogit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cluster.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/colon.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/concordance.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/concordancefit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/cox.zph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.control.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.detail.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxph.wtest.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxphms.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/coxsurv.fit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/diabetic.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/dsurvreg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/finegray.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/flchain.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/frailty.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/gbsg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/heart.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/is.ratetable.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/kidney.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/levels.Surv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/lines.survfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/logLik.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/logan.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/lung.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/mgus.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/mgus2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/model.frame.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/model.matrix.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/myeloid.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/myeloma.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/nafld.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/neardate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/nsk.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/nwtco.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/ovarian.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pbc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pbcseq.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/plot.aareg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/plot.cox.zph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/plot.survfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/predict.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/predict.survreg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.aareg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.summary.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.summary.survexp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.summary.survfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/print.survfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pseudo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pspline.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/pyears.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/quantile.survfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/ratetable.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/ratetableDate.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rats.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rats2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/reliability.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/residuals.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/residuals.survfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/residuals.survreg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/retinopathy.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rhDNase.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/ridge.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rotterdam.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/royston.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/rttright.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/solder.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/stanford2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/statefig.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/strata.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.aareg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.pyears.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.survexp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/summary.survfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survSplit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survcheck.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survcondense.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survdiff.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survexp.fit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survexp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survexp.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survexp.us.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.formula.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.matrix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfit0.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survfitcoxph.fit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survival-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survival-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survobrien.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survreg.control.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survreg.distributions.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survreg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survreg.object.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/survregDtest.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/tcut.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/tmerge.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/tobin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/transplant.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/udca.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/untangle.specials.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/uspop2.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/vcov.coxph.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/veteran.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/xtfrm.Surv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/yates.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/html/yates_setup.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/TclInterface.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/TkCommands.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/TkWidgetcmds.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/TkWidgets.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tclServiceMode.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tcltk-defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tcltk-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tkProgressBar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tkStartGUI.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tk_choose.dir.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tk_choose.files.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tk_messageBox.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tk_select.list.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/html/tkpager.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/CRANtools.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/HTMLheader.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/HTMLlinks.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/QC.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rcmd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rd2HTML.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rd2txt_options.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/RdTextFilter.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rdiff.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rdindex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/Rdutils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/SweaveTeXFilter.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/add_datalist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/assertCondition.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/bibstyle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/buildVignette.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/buildVignettes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/charsets.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkFF.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkMD5sums.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkPoFiles.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkRd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkRdaFiles.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkTnF.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/checkVignettes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/check_packages_in_dir.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/codoc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/compactPDF.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/delimMatch.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/dependsOnPkgs.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/encoded.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/fileutils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/find_gs_cmd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/getVignetteInfo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/loadRdMacros.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/makeLazyLoading.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/make_translations_pkg.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/makevars.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/matchConcordance.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/md5sum.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/package_dependencies.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/package_native_routine_registration_skeleton.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/parseLatex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/parse_Rd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/print.via.format.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/pskill.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/psnice.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/read.00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/showNonASCII.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/startDynamicHelp.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/testInstalledPackage.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/texi2dvi.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/toHTML.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/toRd.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/toTitleCase.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/tools-defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/tools-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/tools-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/undoc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/updatePACKAGES.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/update_pkg_po.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/userdir.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/vignetteEngine.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/vignetteInfo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/writePACKAGES.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/html/xgettext.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/00Index.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/BATCH.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/COMPILE.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/DLL.version.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/INSTALL.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/LINK.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/PkgUtils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Question.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/REMOVE.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/RHOME.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/RShowDoc.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/RSiteSearch.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rconsole.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rprof.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rprofmem.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rscript.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Rtangle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/RweaveLatex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/SHLIB.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/Sweave.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/SweaveSyntConv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/SweaveUtils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/URLencode.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/View.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/adist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/alarm.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/apropos.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/aregexec.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/arrangeWindows.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/askYesNo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/aspell-utils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/aspell.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/available.packages.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/bibentry.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/browseEnv.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/browseURL.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/browseVignettes.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/bug.report.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/capture.output.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/changedFiles.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/charClass.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/choose.dir.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/choose.files.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/chooseBioCmirror.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/chooseCRANmirror.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/citEntry.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/citation.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/cite.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/clipboard.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/close.socket.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/combn.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/compareVersion.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/contrib.url.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/count.fields.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/create.post.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/data.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/dataentry.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/debugcall.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/debugger.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/demo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/download.file.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/download.packages.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/edit.data.frame.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/edit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/example.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/file.edit.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/filetest.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/findCRANmirror.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/findLineNum.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/fix.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/flush.console.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/format.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getAnywhere.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getFromNamespace.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getParseData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getS3method.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getWindowsHandle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/getWindowsHandles.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/glob2rx.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/globalVariables.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/hasName.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/hashtab.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/head.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/help.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/help.request.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/help.search.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/help.start.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/hsearch-utils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/install.packages.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/installed.packages.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/isS3method.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/isS3stdGen.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/localeToCharset.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/ls_str.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/maintainer.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/make.packages.html.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/make.socket.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/memory.size.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/menu.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/methods.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/mirrorAdmin.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/modifyList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/news.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/nsl.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/object.size.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/package.skeleton.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/packageDescription.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/packageName.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/packageStatus.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/page.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/person.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/personList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/process.events.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/prompt.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/promptData.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/promptPackage.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/rcompgen.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.DIF.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.fortran.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.fwf.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.socket.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/read.table.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/readRegistry.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/recover.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/relist.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/remove.packages.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/removeSource.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/roman.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/rtags.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/savehistory.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/select.list.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/sessionInfo.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/setRepositories.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/setWindowTitle.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/shortPathName.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/sourceutils.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/stack.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/str.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/strcapture.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/summaryRprof.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/tar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/toLatex.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/txtProgressBar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/type.convert.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/untar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/unzip.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/update.packages.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/upgrade.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/url.show.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/utils-defunct.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/utils-deprecated.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/utils-internal.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/utils-package.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/vignette.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/warnErrList.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/winDialog.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/winMenus.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/winProgressBar.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/winextras.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/write.table.html + for i in /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/*/html/*.html + sed -i 's|\..\/\..\/..\/doc|/usr/share/doc/R|g' /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/html/zip.html + chmod +x /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/R/sh/echo.sh + chmod +x /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/BATCH /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/COMPILE /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/INSTALL /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/LINK /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/R /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/REMOVE /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rcmd /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rd2pdf /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rdconv /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rdiff /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rprof /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rscript /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/SHLIB /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Stangle /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Sweave /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/build /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/check /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/config /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/exec /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/javareconf /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/libtool /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/mkinstalldirs /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/pager /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/rtags + chmod -x /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/mgcv/CITATION /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/doc/R/CAPABILITIES + '[' '!' -d /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/include ']' ~/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R ~/build/BUILD/R-4.3.1 + pushd /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R + ln -s ../../include/R include + popd ~/build/BUILD/R-4.3.1 + for i in tex/latex bibtex/bib bibtex/bst + mkdir -p /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/texlive/texmf-dist/tex/latex + cd /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/texlive/texmf-dist/tex/latex + ln -s /usr/share/R/texmf/tex/latex R + for i in tex/latex bibtex/bib bibtex/bst + mkdir -p /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/texlive/texmf-dist/bibtex/bib + cd /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/texlive/texmf-dist/bibtex/bib + ln -s /usr/share/R/texmf/bibtex/bib R + for i in tex/latex bibtex/bib bibtex/bst + mkdir -p /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/texlive/texmf-dist/bibtex/bst + cd /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/texlive/texmf-dist/bibtex/bst + ln -s /usr/share/R/texmf/bibtex/bst R + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 4.3.1-1.0.riscv64.fc38 --unique-debug-suffix -4.3.1-1.0.riscv64.fc38.riscv64 --unique-debug-src-base R-4.3.1-1.0.riscv64.fc38.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/R-4.3.1 extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rscript extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/exec/R extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/bin/Rscript extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/lib/libR.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/MASS/libs/MASS.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/KernSmooth/libs/KernSmooth.so extracting debug info from 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debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/spatial/libs/spatial.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/splines/libs/splines.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/stats/libs/stats.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/survival/libs/survival.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tcltk/libs/tcltk.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/tools/libs/tools.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/library/utils/libs/utils.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/modules/R_X11.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/modules/R_de.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/modules/internet.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/modules/lapack.so extracting debug info from /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/libRmath.so original debug info size: 86096kB, size after compression: 84608kB /usr/bin/sepdebugcrcfix: Updated 33 CRC32s, 0 CRC32s did match. 20436 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs --files /usr/lib64/R/bin/ mangling shebang in /usr/bin/R from /bin/sh to #!/usr/bin/sh mangling shebang in /usr/share/R/sh/echo.sh from /bin/sh to #!/usr/bin/sh + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.f2XHyR + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd R-4.3.1 + ulimit -s 16384 + TZ=Europe/Paris + make check make[1]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests/Examples' Testing examples for package 'base' Testing examples for package 'tools' comparing 'tools-Ex.Rout' to 'tools-Ex.Rout.save' ... OK Testing examples for package 'utils' Testing examples for package 'grDevices' comparing 'grDevices-Ex.Rout' to 'grDevices-Ex.Rout.save' ... OK Testing examples for package 'graphics' comparing 'graphics-Ex.Rout' to 'graphics-Ex.Rout.save' ... OK Testing examples for package 'stats' comparing 'stats-Ex.Rout' to 'stats-Ex.Rout.save' ... NOTE 2095c2095 < 2105 191 NaN NaN --- > 2105 191 2127c2127 < 5.13 56.8 NaN NaN --- > 5.13 56.8 2136c2136 < 5.13 56.8 NaN NaN --- > 5.13 56.8 2421c2421 < 4 2 99 NaN NaN --- > 4 2 99 NA NA 2435c2435 < 4 2 99 NaN NaN --- > 4 2 99 NA NA 2525c2525 < [1] NaN 47.00 51.00 NaN 58.50 41.75 28.75 NaN 67.00 65.00 72.75 72.25 --- > [1] NA 47.00 51.00 NA 58.50 41.75 28.75 NA 67.00 65.00 72.75 72.25 2527c2527 < [25] 61.25 58.00 50.50 NaN 44.75 25.25 --- > [25] 61.25 58.00 50.50 NA 44.75 25.25 2534c2534 < [1] NaN 47.57143 50.57143 NaN 58.71429 41.14286 28.28571 NaN --- > [1] NA 47.57143 50.57143 NA 58.71429 41.14286 28.28571 NA 2537c2537 < [25] 60.71429 57.57143 50.00000 NaN 45.42857 25.42857 --- > [25] 60.71429 57.57143 50.00000 NA 45.42857 25.42857 2673c2673 < 1 49 983.63 NaN --- > 1 49 983.63 2688c2688 < 1 45 650.71 NaN --- > 1 45 650.71 3128c3128 < 3 1.5 NaN --- > 3 1.5 NA 3130c3130 < 5 2.5 NaN --- > 5 2.5 NA 3141c3141 < 5 2.5 NaN --- > 5 2.5 NA 3169c3169 < FALSE NA 1.0 1.0 NA NaN 3.0 3.0 4.0 NA --- > FALSE NA 1.0 1.0 NA NA 3.0 3.0 4.0 NA 3171c3171 < FALSE NA 1.0 NaN NA NaN 3.0 3.5 4.0 NA --- > FALSE NA 1.0 NA NA NA 3.0 3.5 4.0 NA 3173c3173 < FALSE 1.0 1.0 1.0 NA NaN 3.0 3.0 4.0 4.0 --- > FALSE 1.0 1.0 1.0 NA NA 3.0 3.0 4.0 4.0 3175c3175 < FALSE 1.0 1.0 NaN NA NaN 3.0 3.5 4.0 4.0 --- > FALSE 1.0 1.0 NA NA NA 3.0 3.5 4.0 4.0 3177c3177 < FALSE NA 1.0 1.0 NA NaN 3.0 3.0 4.0 4.0 --- > FALSE NA 1.0 1.0 NA NA 3.0 3.0 4.0 4.0 3179c3179 < FALSE NA 1.0 NaN NA NaN 3.0 3.5 4.0 4.0 --- > FALSE NA 1.0 NA NA NA 3.0 3.5 4.0 4.0 3181c3181 < FALSE 1.0 1.0 1.0 NA NaN 3.0 3.0 4.0 NA --- > FALSE 1.0 1.0 1.0 NA NA 3.0 3.0 4.0 NA 3183c3183 < FALSE 1.0 1.0 NaN NA NaN 3.0 3.5 4.0 NA --- > FALSE 1.0 1.0 NA NA NA 3.0 3.5 4.0 NA 7166c7166 < Residual Deviance: 101.7 AIC: NaN --- > Residual Deviance: 101.7 AIC: NA 7189c7189 < Residual Deviance: 32.45 AIC: NaN --- > Residual Deviance: 32.45 AIC: NA 7204c7204 < Residual Deviance: 135.8 AIC: NaN --- > Residual Deviance: 135.8 AIC: NA 7443,7444c7443,7444 < Fisher's Exact Test for Count Data hybrid using asym.chisq. iff < (exp=5, perc=80, Emin=1) --- > Fisher's Exact Test for Count Data hybrid using asym.chisq. iff (exp=5, > perc=80, Emin=1) 14043,14044c14043 < 4-sample test for equality of proportions without continuity < correction --- > 4-sample test for equality of proportions without continuity correction 14073,14074c14072 < 4-sample test for equality of proportions without continuity < correction --- > 4-sample test for equality of proportions without continuity correction 14260c14258 < -0.03472603 NaN --- > -0.03472603 NA Testing examples for package 'datasets' comparing 'datasets-Ex.Rout' to 'datasets-Ex.Rout.save' ... 1915c1915 < 1 48 11354 NaN --- > 1 48 11354 2564c2564 < 1 95 523510 NaN --- > 1 95 523510 NOTE Testing examples for package 'methods' Testing examples for package 'grid' comparing 'grid-Ex.Rout' to 'grid-Ex.Rout.save' ... OK Testing examples for package 'splines' comparing 'splines-Ex.Rout' to 'splines-Ex.Rout.save' ... OK Testing examples for package 'stats4' comparing 'stats4-Ex.Rout' to 'stats4-Ex.Rout.save' ... OK Testing examples for package 'tcltk' Testing examples for package 'compiler' Testing examples for package 'parallel' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests/Examples' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' running strict specific tests make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' running code in 'eval-etc.R' ... OK comparing 'eval-etc.Rout' to './eval-etc.Rout.save' ... OK running code in 'simple-true.R' ... OK comparing 'simple-true.Rout' to './simple-true.Rout.save' ... OK running code in 'arith-true.R' ... OK comparing 'arith-true.Rout' to './arith-true.Rout.save' ... OK running code in 'arith.R' ... OK comparing 'arith.Rout' to './arith.Rout.save' ... OK running code in 'lm-tests.R' ... OK comparing 'lm-tests.Rout' to './lm-tests.Rout.save' ... OK running code in 'ok-errors.R' ... OK comparing 'ok-errors.Rout' to './ok-errors.Rout.save' ... OK running code in 'method-dispatch.R' ... OK comparing 'method-dispatch.Rout' to './method-dispatch.Rout.save' ... OK running code in 'any-all.R' ... OK comparing 'any-all.Rout' to './any-all.Rout.save' ... OK running code in 'structure.R' ... OK comparing 'structure.Rout' to './structure.Rout.save' ... OK running code in 'd-p-q-r-tests.R' ... OK comparing 'd-p-q-r-tests.Rout' to './d-p-q-r-tests.Rout.save' ... OK make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' running sloppy specific tests make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' running code in 'complex.R' ... OK comparing 'complex.Rout' to './complex.Rout.save' ... OK running code in 'print-tests.R' ... OK comparing 'print-tests.Rout' to './print-tests.Rout.save' ...376c376 < 4.141593+ 1i 4.341593+ 10i NaN+NaNi Inf+ 0i -Inf+NaNi NaN+Infi --- > 4.141593+ 1i 4.341593+ 10i NA Inf+ 0i -Inf+NaNi NaN+Infi 379c379 < [1,] 4.141593+ 1i NaN+NaNi -Inf+NaNi --- > [1,] 4.141593+ 1i NA -Inf+NaNi 385c385 < [3,] NaN+ NaNi NaN+ Infi --- > [3,] NA NaN+ Infi OK running code in 'lapack.R' ... OK comparing 'lapack.Rout' to './lapack.Rout.save' ...407,409c407,409 < a NaN NaN < b NaN NaN < c NaN NaN --- > a NaN NA > b NaN NA > c NaN NA 417,419c417,419 < a NaN+NaNi NaN+NaNi < b NaN+NaNi NaN+NaNi < c NaN+NaNi NaN+NaNi --- > a NaN+NaNi NA > b NaN+NaNi NA > c NaN+NaNi NA OK running code in 'datasets.R' ... OK comparing 'datasets.Rout' to './datasets.Rout.save' ... OK running code in 'datetime.R' ... OK comparing 'datetime.Rout' to './datetime.Rout.save' ... OK running code in 'iec60559.R' ... OK comparing 'iec60559.Rout' to './iec60559.Rout.save' ... OK running code in 'eval-etc-2.R' ... OK comparing 'eval-etc-2.Rout' to './eval-etc-2.Rout.save' ... OK make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' checking Sys.timezone ... make[4]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' running code in 'timezone.R' ... OK make[4]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' make[2]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' running regression tests ... make[3]: Entering directory '/builddir/build/BUILD/R-4.3.1/tests' running code in 'array-subset.R' ... OK running code in 'reg-tests-1a.R' ... OK running code in 'reg-tests-1b.R' ... OK running code in 'reg-tests-1c.R' ... OK running code in 'reg-tests-1d.R' ... OK running code in 'reg-tests-1e.R' ... OK running code in 'reg-tests-2.R' ... OK comparing 'reg-tests-2.Rout' to './reg-tests-2.Rout.save' ...776,778c776,778 < [1,] 1 0.5 NaN < [2,] 0 -0.5 NaN < [3,] -1 NaN 0 --- > [1,] 1 0.5 NA > [2,] 0 -0.5 NA > [3,] -1 NA 0 783,785c783,785 < [1,] 1 0.7071068 NaN < [2,] 0 -0.7071068 NaN < [3,] -1 NaN NaN --- > [1,] 1 0.7071068 NA > [2,] 0 -0.7071068 NA > [3,] -1 NA NaN 4681c4681 < 1 9 89.130 NaN --- > 1 9 89.130 6122,6124c6122,6124 < [1,] NaN NaN NaN < [2,] NaN 1.0 -0.5 < [3,] NaN -0.5 1.0 --- > [1,] NA NA NA > [2,] NA 1.0 -0.5 > [3,] NA -0.5 1.0 6127,6129c6127,6129 < [1,] NaN NaN NaN < [2,] NaN 1.0000000 -0.3333333 < [3,] NaN -0.3333333 1.0000000 --- > [1,] NA NA NA > [2,] NA 1.0000000 -0.3333333 > [3,] NA -0.3333333 1.0000000 6154,6156c6154,6156 < [1,] NaN NaN NaN < [2,] NaN 1.0 -0.5 < [3,] NaN -0.5 1.0 --- > [1,] NA NA NA > [2,] NA 1.0 -0.5 > [3,] NA -0.5 1.0 6159,6161c6159,6161 < [1,] NaN NaN NaN < [2,] NaN 1.0000000 -0.3333333 < [3,] NaN -0.3333333 1.0000000 --- > [1,] NA NA NA > [2,] NA 1.0000000 -0.3333333 > [3,] NA -0.3333333 1.0000000 6173c6173 < x NaN NaN --- > x NA NA 6178c6178 < x NaN NaN --- > x NA NA make[3]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' make[2]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' make[1]: Leaving directory '/builddir/build/BUILD/R-4.3.1/tests' Processing files: R-4.3.1-1.0.riscv64.fc38.riscv64 Processing files: R-core-4.3.1-1.0.riscv64.fc38.riscv64 make[3]: *** [Makefile.common:119: reg-tests-2.Rout] Error 1 make[2]: *** [Makefile.common:320: test-Reg] Error 2 make[1]: *** [Makefile.common:190: test-all-basics] Error 1 make: *** [Makefile:307: check] Error 2 + : + RPM_EC=0 ++ jobs -p + exit 0 warning: Duplicate build-ids /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/bin/Rscript and /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rscript warning: absolute symlink: /usr/share/texlive/texmf-dist/bibtex/bib/R -> /usr/share/R/texmf/bibtex/bib warning: absolute symlink: /usr/share/texlive/texmf-dist/bibtex/bst/R -> /usr/share/R/texmf/bibtex/bst warning: absolute symlink: /usr/share/texlive/texmf-dist/tex/latex/R -> /usr/share/R/texmf/tex/latex Provides: R(ABI) = 4.3 R(KernSmooth) = 2.23.21 R(MASS) = 7.3.60 R(Matrix) = 1.5.4.1 R(base) = 4.3.1 R(boot) = 1.3.28.1 R(class) = 7.3.22 R(cluster) = 2.1.4 R(codetools) = 0.2.19 R(compiler) = 4.3.1 R(datasets) = 4.3.1 R(foreign) = 0.8.84 R(grDevices) = 4.3.1 R(graphics) = 4.3.1 R(grid) = 4.3.1 R(lattice) = 0.21.8 R(methods) = 4.3.1 R(mgcv) = 1.8.42 R(nlme) = 3.1.162 R(nnet) = 7.3.19 R(parallel) = 4.3.1 R(rpart) = 4.1.19 R(spatial) = 7.3.16 R(splines) = 4.3.1 R(stats) = 4.3.1 R(stats4) = 4.3.1 R(survival) = 3.5.5 R(tcltk) = 4.3.1 R(tools) = 4.3.1 R(translations) = 4.3.1 R(utils) = 4.3.1 R-KernSmooth = 2.23.21 R-MASS = 7.3.60 R-Matrix = 1.5.4.1 R-base = 4.3.1 R-boot = 1.3.28.1 R-class = 7.3.22 R-cluster = 2.1.4 R-codetools = 0.2.19 R-compiler = 4.3.1 R-core = 4.3.1-1.0.riscv64.fc38 R-core(riscv-64) = 4.3.1-1.0.riscv64.fc38 R-datasets = 4.3.1 R-foreign = 0.8.84 R-grDevices = 4.3.1 R-graphics = 4.3.1 R-grid = 4.3.1 R-lattice = 0.21.8 R-methods = 4.3.1 R-mgcv = 1.8.42 R-nlme = 3.1.162 R-nnet = 7.3.19 R-parallel = 4.3.1 R-rpart = 4.1.19 R-spatial = 7.3.16 R-splines = 4.3.1 R-stats = 4.3.1 R-stats4 = 4.3.1 R-survival = 3.5.5 R-tcltk = 4.3.1 R-tools = 4.3.1 R-translations = 4.3.1 R-utils = 4.3.1 config(R-core) = 4.3.1-1.0.riscv64.fc38 libR.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /bin/sh /usr/bin/sh ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libX11.so.6()(64bit) libXmu.so.6()(64bit) libXt.so.6()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libcairo.so.2()(64bit) libcurl.so.4()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgobject-2.0.so.0()(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libicui18n.so.72()(64bit) libicuuc.so.72()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) liblzma.so.5()(64bit) liblzma.so.5(XZ_5.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libpango-1.0.so.0()(64bit) libpangocairo-1.0.so.0()(64bit) libpcre2-8.so.0()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libreadline.so.8()(64bit) libtcl8.6.so()(64bit) libtiff.so.5()(64bit) libtiff.so.5(LIBTIFF_4.0)(64bit) libtirpc.so.3()(64bit) libtirpc.so.3(TIRPC_0.3.0)(64bit) libtk8.6.so()(64bit) libtre.so.5()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Obsoletes: R-Matrix < 0.999375-7 Processing files: R-core-devel-4.3.1-1.0.riscv64.fc38.riscv64 Provides: R-Matrix-devel = 1.5.4.1 R-core-devel = 4.3.1-1.0.riscv64.fc38 R-core-devel(riscv-64) = 4.3.1-1.0.riscv64.fc38 pkgconfig(libR) = 4.3.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config Obsoletes: R-Matrix-devel < 0.999375-7 Recommends: devscripts-checkbashisms qpdf tex(inconsolata.sty) tex(latex) texinfo-tex tidy Processing files: R-devel-4.3.1-1.0.riscv64.fc38.riscv64 Processing files: R-java-4.3.1-1.0.riscv64.fc38.riscv64 Processing files: R-java-devel-4.3.1-1.0.riscv64.fc38.riscv64 Processing files: libRmath-4.3.1-1.0.riscv64.fc38.riscv64 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.sTeBVf + umask 022 + cd /builddir/build/BUILD + cd R-4.3.1 + LICENSEDIR=/builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/licenses/libRmath + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/licenses/libRmath + cp -pr doc/COPYING /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/share/licenses/libRmath + RPM_EC=0 ++ jobs -p + exit 0 Provides: libRmath = 4.3.1-1.0.riscv64.fc38 libRmath(riscv-64) = 4.3.1-1.0.riscv64.fc38 libRmath.so()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Processing files: libRmath-devel-4.3.1-1.0.riscv64.fc38.riscv64 Provides: libRmath-devel = 4.3.1-1.0.riscv64.fc38 libRmath-devel(riscv-64) = 4.3.1-1.0.riscv64.fc38 pkgconfig(libRmath) = 4.3.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config Processing files: libRmath-static-4.3.1-1.0.riscv64.fc38.riscv64 Provides: libRmath-static = 4.3.1-1.0.riscv64.fc38 libRmath-static(riscv-64) = 4.3.1-1.0.riscv64.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-debugsource-4.3.1-1.0.riscv64.fc38.riscv64 Provides: R-debugsource = 4.3.1-1.0.riscv64.fc38 R-debugsource(riscv-64) = 4.3.1-1.0.riscv64.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-debuginfo-4.3.1-1.0.riscv64.fc38.riscv64 Provides: R-debuginfo = 4.3.1-1.0.riscv64.fc38 R-debuginfo(riscv-64) = 4.3.1-1.0.riscv64.fc38 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(riscv-64) = 4.3.1-1.0.riscv64.fc38 Processing files: R-core-debuginfo-4.3.1-1.0.riscv64.fc38.riscv64 warning: Duplicate build-ids /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib/debug/usr/bin/Rscript-4.3.1-1.0.riscv64.fc38.riscv64.debug and /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib/debug/usr/lib64/R/bin/Rscript-4.3.1-1.0.riscv64.fc38.riscv64.debug Provides: R-core-debuginfo = 4.3.1-1.0.riscv64.fc38 R-core-debuginfo(riscv-64) = 4.3.1-1.0.riscv64.fc38 debuginfo(build-id) = 0545fc3cfa0366917c0dbc786ac73bdedf1a6f7d debuginfo(build-id) = 0823dc2c76072d89c409bd63001ce73cc644e8a0 debuginfo(build-id) = 0b12654f3bd99b5f983e8cbf591b46a0fbbdf499 debuginfo(build-id) = 1401b23244e1d179228ee5a216a8da26aab67899 debuginfo(build-id) = 15d671aad44dd616603889cb0abcc1444dd3e779 debuginfo(build-id) = 26a494ea4c9fbf11f306c21b79dc35654b3507e4 debuginfo(build-id) = 27c83bb589349104f29ef1cf47d283f42de5ef2c debuginfo(build-id) = 2bc4b3272a5730502a4802f8a28bb00111d6526f debuginfo(build-id) = 330a6ee1a3bd721a2fa9fe39a2e875d4b9cc23e9 debuginfo(build-id) = 4b82d8738fb14158c34b8f761beb979405c53534 debuginfo(build-id) = 4cabd85e6d41d6f58183c0eb72b7bf56f8ba1ff6 debuginfo(build-id) = 536da04ca26b15dacb02d983fd4023a44879a1a0 debuginfo(build-id) = 5f1e13cdace998fa5845f3f2a0ca3905dd2fcd75 debuginfo(build-id) = 6e781b02fc9df54a4358f309ef0542f359466f97 debuginfo(build-id) = 732fd6d7ea4bf297338e58c5b86dae47ff9eed48 debuginfo(build-id) = 784464d2b74b436957ef3c933f8c9267ca52e1b7 debuginfo(build-id) = 793b1b9f8928709466c28085c17a4772e19c8a77 debuginfo(build-id) = 7fc0b2c6c9cc83455974454f57514a0774529d66 debuginfo(build-id) = 80fa49d832ca5123d7e952459fc538a9b014698c debuginfo(build-id) = 82a8e68709fc9fe702f4b7cc52ffece0270e2d04 debuginfo(build-id) = 85d0a1e98e4a4b2aa379626c089a20c86d602997 debuginfo(build-id) = 884a78dc4100ce29426a99a30cdd665a81d1e1fd debuginfo(build-id) = 946522f3d429bd9687e90e839c479c0bf443bd0b debuginfo(build-id) = a2adc41e4f33b51f8540e9a3db25bebdc9f47311 debuginfo(build-id) = b0e40bdb13673b4b2cb8d32bd10f9fd14e03dc46 debuginfo(build-id) = bb85378f9385cba8148db27bdf9da2024ec48edc debuginfo(build-id) = bd9acde04ff5ccd94b8d78b44c060fc4066b0957 debuginfo(build-id) = ce503b6957b0e3c68c56b2fa853ce26b868b96d4 debuginfo(build-id) = d47e617864603e17053690b38c141f221e191b09 debuginfo(build-id) = e6e7da20dfeb6a536ad32aa5f355d381b81c77ff debuginfo(build-id) = f10d81225ccfa2468b9c0425966fc1678008848f debuginfo(build-id) = nilnil libR.so-4.3.1-1.0.riscv64.fc38.riscv64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(riscv-64) = 4.3.1-1.0.riscv64.fc38 Processing files: libRmath-debuginfo-4.3.1-1.0.riscv64.fc38.riscv64 Provides: debuginfo(build-id) = 048e5604b7827dc647fe5f64710aa093a7374938 libRmath-debuginfo = 4.3.1-1.0.riscv64.fc38 libRmath-debuginfo(riscv-64) = 4.3.1-1.0.riscv64.fc38 libRmath.so-4.3.1-1.0.riscv64.fc38.riscv64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-debugsource(riscv-64) = 4.3.1-1.0.riscv64.fc38 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64 Wrote: /builddir/build/RPMS/libRmath-static-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-debuginfo-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-core-devel-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-debuginfo-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/libRmath-devel-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-devel-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-java-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-java-devel-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-debugsource-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-core-debuginfo-4.3.1-1.0.riscv64.fc38.riscv64.rpm Wrote: /builddir/build/RPMS/R-core-4.3.1-1.0.riscv64.fc38.riscv64.rpm RPM build warnings: Duplicate build-ids /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/bin/Rscript and /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib64/R/bin/Rscript absolute symlink: /usr/share/texlive/texmf-dist/bibtex/bib/R -> /usr/share/R/texmf/bibtex/bib absolute symlink: /usr/share/texlive/texmf-dist/bibtex/bst/R -> /usr/share/R/texmf/bibtex/bst absolute symlink: /usr/share/texlive/texmf-dist/tex/latex/R -> /usr/share/R/texmf/tex/latex Duplicate build-ids /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib/debug/usr/bin/Rscript-4.3.1-1.0.riscv64.fc38.riscv64.debug and /builddir/build/BUILDROOT/R-4.3.1-1.0.riscv64.fc38.riscv64/usr/lib/debug/usr/lib64/R/bin/Rscript-4.3.1-1.0.riscv64.fc38.riscv64.debug Child return code was: 0