Mock Version: 1.4.21 Mock Version: 1.4.21 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-randomForest.spec'], chrootPath='/var/lib/mock/f33-build-585555-66643/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-randomForest.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1602892800 Wrote: /builddir/build/SRPMS/R-randomForest-4.6.14-1.fc33.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-randomForest.spec'], chrootPath='/var/lib/mock/f33-build-585555-66643/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-randomForest.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1602892800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.fJlfm1 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf randomForest + /usr/bin/mkdir -p randomForest + cd randomForest + /usr/bin/gzip -dc /builddir/build/SOURCES/randomForest_4.6-14.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.PehBG0 + umask 022 + cd /builddir/build/BUILD + cd randomForest + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.MEzA8Z + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64 ++ dirname /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64 + cd randomForest + mkdir -p /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64/usr/lib64/R/library randomForest * installing *source* package 'randomForest' ... ** package 'randomForest' successfully unpacked and MD5 sums checked ** using staged installation ** libs gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c classTree.c -o classTree.o classTree.c: In function 'predictClassTree': classTree.c:453:19: warning: 'cbestsplit' may be used uninitialized in this function [-Wmaybe-uninitialized] 453 | k = cbestsplit[(int) x[m + i * mdim] - 1 + k * maxcat] ? | ^ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c init.c -o init.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c regTree.c -o regTree.o regTree.c: In function 'predictRegTree': regTree.c:368:23: warning: 'cbestsplit' may be used uninitialized in this function [-Wmaybe-uninitialized] 368 | k = cbestsplit[(int) x[m + i * mdim] - 1 + k * maxcat] ? | ^ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c regrf.c -o regrf.o regrf.c: In function 'regRF': regrf.c:52:25: warning: variable 'averrb' set but not used [-Wunused-but-set-variable] 52 | double errts = 0.0, averrb, meanY, meanYts, varY, varYts, r, xrand, | ^~~~~~ regrf.c:61:30: warning: 'nodexts' may be used uninitialized in this function [-Wmaybe-uninitialized] 61 | int *in, *nind, *nodex, *nodexts; | ^~~~~~~ regrf.c:55:36: warning: 'ytree' may be used uninitialized in this function [-Wmaybe-uninitialized] 55 | double *yb, *xtmp, *xb, *ytr, *ytree, *tgini; | ^~~~~ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c rf.c -o rf.o rf.c: In function 'classRF': rf.c:175:5: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 175 | for (n = 0; n < nsample0; ++n) | ^~~ rf.c:179:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 179 | strata_size = (int *) S_alloc(nstrata, sizeof(int)); | ^~~~~~~~~~~ rf.c:103:4: warning: variable 'tp' set but not used [-Wunused-but-set-variable] 103 | *tp, *wr, *bestsplitnext, *bestsplit; | ^~ rf.c:88:9: warning: variable 'nimp' set but not used [-Wunused-but-set-variable] 88 | mimp, nimp, near, nuse, noutall, nrightall, nrightimpall, | ^~~~ rf.c:88:3: warning: variable 'mimp' set but not used [-Wunused-but-set-variable] 88 | mimp, nimp, near, nuse, noutall, nrightall, nrightimpall, | ^~~~ rf.c:360:7: warning: 'nclts' may be used uninitialized in this function [-Wmaybe-uninitialized] 360 | TestSetError(countts, jts, clts, outclts, ntest, nclass, jb+1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 | errts + jb*(nclass+1), *labelts, nclts, cut); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rf.c:89:14: warning: 'nstrata' may be used uninitialized in this function [-Wmaybe-uninitialized] 89 | keepInbag, nstrata; | ^~~~~~~ rf.c:97:37: warning: 'oobpair' may be used uninitialized in this function [-Wmaybe-uninitialized] 97 | *at, *a, *b, *mind, *nind, *jts, *oobpair; | ^~~~~~~ gfortran -fno-optimize-sibling-calls -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection --no-optimize-sibling-calls -c rfsub.f -o rfsub.o f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran annobin: rfsub.f: Warning: -D_FORTIFY_SOURCE not defined annobin: rfsub.f: Warning: -D_GLIBCXX_ASSERTIONS not defined gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c rfutils.c -o rfutils.o gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o randomForest.so classTree.o init.o regTree.o regrf.o rf.o rfsub.o rfutils.o -L -L -lgfortran -lm -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64/usr/lib64/R/library/00LOCK-randomForest/00new/randomForest/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'randomForest' finding HTML links ... done MDSplot html classCenter html combine html getTree html grow html importance html imports85 html margin html na.roughfix html outlier html partialPlot html plot.randomForest html predict.randomForest html randomForest html rfImpute html rfNews html rfcv html treesize html tuneRF html varImpPlot html varUsed html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (randomForest) + test -d randomForest/src + cd randomForest/src + rm -f classTree.o init.o regTree.o regrf.o rf.o rfsub.o rfutils.o randomForest.so + rm -f /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64/usr/lib64/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 4.6.14-1.fc33 --unique-debug-suffix -4.6.14-1.fc33.riscv64 --unique-debug-src-base R-randomForest-4.6.14-1.fc33.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/randomForest explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64/usr/lib64/R/library/randomForest/libs/randomForest.so extracting debug info from /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64/usr/lib64/R/library/randomForest/libs/randomForest.so original debug info size: 416kB, size after compression: 416kB /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 197 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.3ZgG3Y + umask 022 + cd /builddir/build/BUILD + cd randomForest + /usr/bin/R CMD check randomForest * using log directory '/builddir/build/BUILD/randomForest/randomForest.Rcheck' * using R version 4.0.3 (2020-10-10) * using platform: riscv64-redhat-linux-gnu (64-bit) * using session charset: ASCII * checking for file 'randomForest/DESCRIPTION' ... OK * this is package 'randomForest' version '4.6-14' * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.11/bioc/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.11/bioc/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.11/data/annotation/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.11/data/annotation/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.11/data/experiment/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.11/data/experiment/src/contrib/PACKAGES' OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'randomForest' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking examples ... OK * checking PDF version of manual ... OK * DONE Status: OK + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-randomForest-4.6.14-1.fc33.riscv64 Provides: R(randomForest) = 4.6-14 R-randomForest = 4.6.14-1.fc33 R-randomForest(riscv-64) = 4.6.14-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 4.0 R(stats) R-core >= 3.2.2 ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Suggests: R(MASS) R(RColorBrewer) Processing files: R-randomForest-debugsource-4.6.14-1.fc33.riscv64 Provides: R-randomForest-debugsource = 4.6.14-1.fc33 R-randomForest-debugsource(riscv-64) = 4.6.14-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-randomForest-debuginfo-4.6.14-1.fc33.riscv64 Provides: R-randomForest-debuginfo = 4.6.14-1.fc33 R-randomForest-debuginfo(riscv-64) = 4.6.14-1.fc33 debuginfo(build-id) = dda599d5ceb4335c94f8fee09df05e6e0c5d5bff Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-randomForest-debugsource(riscv-64) = 4.6.14-1.fc33 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64 Wrote: /builddir/build/RPMS/R-randomForest-debugsource-4.6.14-1.fc33.riscv64.rpm Wrote: /builddir/build/RPMS/R-randomForest-debuginfo-4.6.14-1.fc33.riscv64.rpm Wrote: /builddir/build/RPMS/R-randomForest-4.6.14-1.fc33.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.3OaWx0 + umask 022 + cd /builddir/build/BUILD + cd randomForest + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-randomForest-4.6.14-1.fc33.riscv64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0