Mock Version: 1.4.14 Mock Version: 1.4.14 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-poLCA.spec'], chrootPath='/var/lib/mock/f31-build-99297-33132/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=986gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-poLCA.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1565481600 Wrote: /builddir/build/SRPMS/R-poLCA-1.4.1-6.fc31.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-poLCA.spec'], chrootPath='/var/lib/mock/f31-build-99297-33132/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=986gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-poLCA.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1565481600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.aEmATo + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf poLCA + /usr/bin/mkdir -p poLCA + cd poLCA + /usr/bin/gzip -dc /builddir/build/SOURCES/poLCA_1.4.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.PsgpBq + umask 022 + cd /builddir/build/BUILD + cd poLCA + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.vbT6Cp + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64 BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64 + cd poLCA + mkdir -p /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64/usr/lib64/R/library poLCA BUILDSTDERR: * installing *source* package 'poLCA' ... BUILDSTDERR: ** package 'poLCA' successfully unpacked and MD5 sums checked BUILDSTDERR: ** using staged installation BUILDSTDERR: ** libs BUILDSTDERR: installing to /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64/usr/lib64/R/library/00LOCK-poLCA/00new/poLCA/libs BUILDSTDERR: ** R BUILDSTDERR: ** data BUILDSTDERR: ** inst BUILDSTDERR: ** byte-compile and prepare package for lazy loading BUILDSTDERR: ** help BUILDSTDERR: *** installing help indices BUILDSTDERR: finding HTML links ... done BUILDSTDERR: ** building package indices BUILDSTDERR: ** testing if installed package can be loaded from temporary location BUILDSTDERR: ** checking absolute paths in shared objects and dynamic libraries BUILDSTDERR: ** testing if installed package can be loaded from final location BUILDSTDERR: ** testing if installed package keeps a record of temporary installation path BUILDSTDERR: * DONE (poLCA) + test -d poLCA/src + cd poLCA/src + rm -f poLCA.o poLCA.so + rm -f /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64/usr/lib64/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 1.4.1-6.fc31 --unique-debug-suffix -1.4.1-6.fc31.riscv64 --unique-debug-src-base R-poLCA-1.4.1-6.fc31.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/poLCA BUILDSTDERR: 14 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c poLCA.c -o poLCA.o gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o poLCA.so poLCA.o -L/usr/lib64/R/lib -lR converting help for package 'poLCA' carcinoma html cheating html election html gss82 html poLCA html poLCA.entropy html poLCA.posterior html poLCA.predcell html poLCA.reorder html poLCA.simdata html poLCA.table html rmulti html values html explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64/usr/lib64/R/library/poLCA/libs/poLCA.so extracting debug info from /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64/usr/lib64/R/library/poLCA/libs/poLCA.so original debug info size: 56kB, size after compression: 60kB /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.OTFL9r + umask 022 + cd /builddir/build/BUILD + cd poLCA + /usr/bin/R CMD check poLCA BUILDSTDERR: Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: BUILDSTDERR: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.9/bioc/src/contrib: BUILDSTDERR: cannot open URL 'https://bioconductor.org/packages/3.9/bioc/src/contrib/PACKAGES' BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.9/data/annotation/src/contrib: BUILDSTDERR: cannot open URL 'https://bioconductor.org/packages/3.9/data/annotation/src/contrib/PACKAGES' BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.9/data/experiment/src/contrib: BUILDSTDERR: cannot open URL 'https://bioconductor.org/packages/3.9/data/experiment/src/contrib/PACKAGES' * using log directory '/builddir/build/BUILD/poLCA/poLCA.Rcheck' * using R version 3.6.1 (2019-07-05) * using platform: riscv64-redhat-linux-gnu (64-bit) * using session charset: ASCII * checking for file 'poLCA/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'poLCA' version '1.4.1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'poLCA' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... WARNING Error: package 'scatterplot3d' required by 'poLCA' could not be found Execution halted It looks like this package has a loading problem when not on .libPaths: see the messages for details. * checking dependencies in R code ... NOTE Packages in Depends field not imported from: 'MASS' 'scatterplot3d' These packages need to be imported from (in the NAMESPACE file) for when this namespace is loaded but not attached. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE plot.poLCA: no visible global function definition for 'layout' plot.poLCA: no visible global function definition for 'par' poLCA: no visible global function definition for 'model.frame' poLCA: no visible global function definition for 'model.response' poLCA: no visible global function definition for 'model.matrix' poLCA: no visible global function definition for 'runif' poLCA: no visible global function definition for 'ginv' poLCA: no visible global function definition for 'flush.console' poLCA.makeplot.dich: no visible global function definition for 'scatterplot3d' poLCA.makeplot.poly: no visible global function definition for 'scatterplot3d' poLCA.se: no visible global function definition for 'ginv' poLCA.simdata: no visible global function definition for 'runif' poLCA.simdata: no visible global function definition for 'rnorm' poLCA.table: no visible global function definition for 'model.frame' print.poLCA: no visible global function definition for 'pt' print.poLCA: no visible global function definition for 'flush.console' rmulti: no visible global function definition for 'runif' Undefined global functions or variables: flush.console ginv layout model.frame model.matrix model.response par pt rnorm runif scatterplot3d Consider adding importFrom("graphics", "layout", "par") importFrom("stats", "model.frame", "model.matrix", "model.response", "pt", "rnorm", "runif") importFrom("utils", "flush.console") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... WARNING Unknown package 'flexmix' in Rd xrefs * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK BUILDSTDERR: * checking data for ASCII and uncompressed saves BUILDSTDERR: See BUILDSTDERR: '/builddir/build/BUILD/poLCA/poLCA.Rcheck/00check.log' BUILDSTDERR: for details. + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking examples ... OK * checking PDF version of manual ... OK * DONE Status: 2 WARNINGs, 2 NOTEs Processing files: R-poLCA-1.4.1-6.fc31.riscv64 Provides: R(poLCA) = 1.4.1 R-poLCA = 1.4.1-6.fc31 R-poLCA(riscv-64) = 1.4.1-6.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(MASS) R(scatterplot3d) R-core ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Processing files: R-poLCA-debugsource-1.4.1-6.fc31.riscv64 Provides: R-poLCA-debugsource = 1.4.1-6.fc31 R-poLCA-debugsource(riscv-64) = 1.4.1-6.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-poLCA-debuginfo-1.4.1-6.fc31.riscv64 Provides: R-poLCA-debuginfo = 1.4.1-6.fc31 R-poLCA-debuginfo(riscv-64) = 1.4.1-6.fc31 debuginfo(build-id) = c919446569c975fb2b7452b8ce47426133ac80ac Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-poLCA-debugsource(riscv-64) = 1.4.1-6.fc31 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64 Wrote: /builddir/build/RPMS/R-poLCA-debugsource-1.4.1-6.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/R-poLCA-debuginfo-1.4.1-6.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/R-poLCA-1.4.1-6.fc31.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.NeGkvs + umask 022 + cd /builddir/build/BUILD + cd poLCA + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-poLCA-1.4.1-6.fc31.riscv64 + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Child return code was: 0