Mock Version: 1.4.14 Mock Version: 1.4.14 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-lokern.spec'], chrootPath='/var/lib/mock/f31-build-100528-33061/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=986gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-lokern.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1565481600 Wrote: /builddir/build/SRPMS/R-lokern-1.1.8-4.fc31.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-lokern.spec'], chrootPath='/var/lib/mock/f31-build-100528-33061/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=986gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-lokern.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1565481600 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.46rzVW + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf lokern + /usr/bin/mkdir -p lokern + cd lokern + /usr/bin/tar -xof - + /usr/bin/gzip -dc /builddir/build/SOURCES/lokern_1.1-8.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.8ZujPZ + umask 022 + cd /builddir/build/BUILD + cd lokern + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.gc9c00 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64 BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64 + cd lokern + mkdir -p /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library lokern BUILDSTDERR: * installing *source* package 'lokern' ... BUILDSTDERR: ** package 'lokern' successfully unpacked and MD5 sums checked BUILDSTDERR: ** using staged installation BUILDSTDERR: ** libs BUILDSTDERR: installing to /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library/00LOCK-lokern/00new/lokern/libs BUILDSTDERR: ** R BUILDSTDERR: ** data BUILDSTDERR: ** demo BUILDSTDERR: ** byte-compile and prepare package for lazy loading BUILDSTDERR: ** help BUILDSTDERR: *** installing help indices BUILDSTDERR: finding HTML links ... done BUILDSTDERR: finding level-2 HTML links ... done BUILDSTDERR: ** building package indices BUILDSTDERR: ** testing if installed package can be loaded from temporary location BUILDSTDERR: ** checking absolute paths in shared objects and dynamic libraries BUILDSTDERR: ** testing if installed package can be loaded from final location BUILDSTDERR: ** testing if installed package keeps a record of temporary installation path BUILDSTDERR: * DONE (lokern) + test -d lokern/src + cd lokern/src + rm -f auxkerns.o glkerns.o lokerns.o monitor.o lokern.so + rm -f /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh -j8 --strict-build-id -m -i --build-id-seed 1.1.8-4.fc31 --unique-debug-suffix -1.1.8-4.fc31.riscv64 --unique-debug-src-base R-lokern-1.1.8-4.fc31.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/lokern BUILDSTDERR: 136 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs gfortran -fno-optimize-sibling-calls -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection --no-optimize-sibling-calls -c auxkerns.f -o auxkerns.o gfortran -fno-optimize-sibling-calls -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection --no-optimize-sibling-calls -c glkerns.f -o glkerns.o gfortran -fno-optimize-sibling-calls -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection --no-optimize-sibling-calls -c lokerns.f -o lokerns.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c monitor.c -o monitor.o gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o lokern.so auxkerns.o glkerns.o lokerns.o monitor.o -L -L -lgfortran -lm -L/usr/lib64/R/lib -lR converting help for package 'lokern' KernS-methods html glkerns html lokerns html varNPreg html xSim html explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library/lokern/libs/lokern.so extracting debug info from /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64/usr/lib64/R/library/lokern/libs/lokern.so original debug info size: 140kB, size after compression: 140kB /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.1VVjNY + umask 022 + cd /builddir/build/BUILD + cd lokern + /usr/bin/R CMD check lokern BUILDSTDERR: Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: BUILDSTDERR: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.9/bioc/src/contrib: BUILDSTDERR: cannot open URL 'https://bioconductor.org/packages/3.9/bioc/src/contrib/PACKAGES' BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.9/data/annotation/src/contrib: BUILDSTDERR: cannot open URL 'https://bioconductor.org/packages/3.9/data/annotation/src/contrib/PACKAGES' BUILDSTDERR: Warning: unable to access index for repository https://bioconductor.org/packages/3.9/data/experiment/src/contrib: BUILDSTDERR: cannot open URL 'https://bioconductor.org/packages/3.9/data/experiment/src/contrib/PACKAGES' BUILDSTDERR: Running 'glk-lok-new.R' BUILDSTDERR: Running 'glk1.R' BUILDSTDERR: Comparing 'glk1.Rout' to 'glk1.Rout.save' ... Running 'infloop-bug.R' BUILDSTDERR: Running 'lok1.R' BUILDSTDERR: Comparing 'lok1.Rout' to 'lok1.Rout.save' ... BUILDSTDERR: See BUILDSTDERR: '/builddir/build/BUILD/lokern/lokern.Rcheck/00check.log' BUILDSTDERR: for details. + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 * using log directory '/builddir/build/BUILD/lokern/lokern.Rcheck' * using R version 3.6.1 (2019-07-05) * using platform: riscv64-redhat-linux-gnu (64-bit) * using session charset: ASCII * checking for file 'lokern/DESCRIPTION' ... OK * this is package 'lokern' version '1.1-8' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'lokern' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... WARNING Error: package or namespace load failed for 'lokern' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]): there is no package called 'sfsmisc' Execution halted It looks like this package has a loading problem when not on .libPaths: see the messages for details. * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... 38c38 < -3.0683 -1.6676 0.7053 0.4094 1.7819 4.2125 --- > -3.0680 -1.6680 0.7053 0.4094 1.7820 4.2130 9c9 < -3.1323 -1.6148 0.7583 0.3969 1.7713 4.4505 --- > -3.1320 -1.6150 0.7583 0.3969 1.7710 4.4500 79c79 < -3.0721 -1.6666 0.7102 0.4164 1.7826 4.2935 --- > -3.0720 -1.6670 0.7102 0.4164 1.7830 4.2940 82c82 < -41.231 -8.198 -5.577 -4.945 -1.786 35.279 --- > -41.230 -8.198 -5.577 -4.945 -1.786 35.280 195c195 < -688.691 -74.741 26.413 -4.829 169.492 352.630 --- > -688.700 -74.740 26.410 -4.829 169.500 352.600 205c205 < 0.07662 0.07995 0.09398 0.09034 0.09501 0.10938 --- > 0.07662 0.07995 0.09398 0.09034 0.09501 0.10940 OK * checking PDF version of manual ... OK * DONE Status: 1 WARNING Processing files: R-lokern-1.1.8-4.fc31.riscv64 Provides: R(lokern) = 1.1-8 R-lokern = 1.1.8-4.fc31 R-lokern(riscv-64) = 1.1.8-4.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(grDevices) R(graphics) R(sfsmisc) >= 1.0-12 R(stats) R(utils) R-core ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Processing files: R-lokern-debugsource-1.1.8-4.fc31.riscv64 Provides: R-lokern-debugsource = 1.1.8-4.fc31 R-lokern-debugsource(riscv-64) = 1.1.8-4.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-lokern-debuginfo-1.1.8-4.fc31.riscv64 Provides: R-lokern-debuginfo = 1.1.8-4.fc31 R-lokern-debuginfo(riscv-64) = 1.1.8-4.fc31 debuginfo(build-id) = ddc114c24245b0563b10b96a42d5b0abcfcaaae0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-lokern-debugsource(riscv-64) = 1.1.8-4.fc31 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64 Wrote: /builddir/build/RPMS/R-lokern-debugsource-1.1.8-4.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/R-lokern-1.1.8-4.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/R-lokern-debuginfo-1.1.8-4.fc31.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.PBY3L0 + umask 022 + cd /builddir/build/BUILD + cd lokern + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-lokern-1.1.8-4.fc31.riscv64 + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Child return code was: 0