Mock Version: 1.4.9 Mock Version: 1.4.9 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-caTools.spec'], chrootPath='/var/lib/mock/f31-build-97177-32910/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=timeout=345600uid=995gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-caTools.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1565568000 Wrote: /builddir/build/SRPMS/R-caTools-1.17.1-12.fc31.src.rpm Child return code was: 0 ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-caTools.spec'], chrootPath='/var/lib/mock/f31-build-97177-32910/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'}shell=Falselogger=timeout=345600uid=995gid=135user='mockbuild'nspawn_args=[]unshare_net=FalseprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-caTools.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8', 'http_proxy': 'http://192.168.0.254:3128', 'https_proxy': 'http://192.168.0.254:3128'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1565568000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.Z34z1l + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf caTools + /usr/bin/mkdir -p caTools + cd caTools + /usr/bin/gzip -dc /builddir/build/SOURCES/caTools_1.17.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + chmod -x caTools/src/Gif2R.cpp caTools/src/GifTools.cpp caTools/src/GifTools.h caTools/src/runfunc.c + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Foswdl + umask 022 + cd /builddir/build/BUILD + cd caTools + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.aQeg5o + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64 BUILDSTDERR: ++ dirname /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64 + cd caTools + mkdir -p /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64/usr/lib64/R/library + R CMD INSTALL caTools -l /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64/usr/lib64/R/library BUILDSTDERR: * installing *source* package 'caTools' ... BUILDSTDERR: ** package 'caTools' successfully unpacked and MD5 sums checked BUILDSTDERR: ** using staged installation BUILDSTDERR: ** libs BUILDSTDERR: runfunc.c: In function 'sum_exact': BUILDSTDERR: runfunc.c:147:17: warning: 'partial[0]' may be used uninitialized in this function [-Wmaybe-uninitialized] BUILDSTDERR: 147 | *Out = partial[0]; BUILDSTDERR: | ~~~~~~~^~~ BUILDSTDERR: installing to /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64/usr/lib64/R/library/00LOCK-caTools/00new/caTools/libs BUILDSTDERR: ** R BUILDSTDERR: ** byte-compile and prepare package for lazy loading BUILDSTDERR: ** help BUILDSTDERR: *** installing help indices BUILDSTDERR: finding HTML links ... done BUILDSTDERR: ** building package indices BUILDSTDERR: ** testing if installed package can be loaded from temporary location BUILDSTDERR: ** checking absolute paths in shared objects and dynamic libraries BUILDSTDERR: ** testing if installed package can be loaded from final location BUILDSTDERR: ** testing if installed package keeps a record of temporary installation path BUILDSTDERR: * DONE (caTools) + test -d caTools/src + cd caTools/src + rm -f Gif2R.o GifTools.o runfunc.o caTools.so + rm -rf /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64/usr/lib64/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 1.17.1-12.fc31 --unique-debug-suffix -1.17.1-12.fc31.riscv64 --unique-debug-src-base R-caTools-1.17.1-12.fc31.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/caTools BUILDSTDERR: 180 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile /usr/bin/python 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c Gif2R.cpp -o Gif2R.o g++ -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c GifTools.cpp -o GifTools.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c runfunc.c -o runfunc.o g++ -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o caTools.so Gif2R.o GifTools.o runfunc.o -L/usr/lib64/R/lib -lR converting help for package 'caTools' ENVI html GIF html LogitBoost html base64 html caTools-internal html caTools-package html colAUC html combs html predict.LogitBoost html runmad html runmean html runminmax html runquantile html runsd html sample.split html sumexact html trapz html explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64/usr/lib64/R/library/caTools/libs/caTools.so extracting debug info from /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64/usr/lib64/R/library/caTools/libs/caTools.so original debug info size: 180kB, size after compression: 172kB /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.9fCJKn + umask 022 + cd /builddir/build/BUILD + cd caTools + /usr/bin/R CMD check caTools * using log directory '/builddir/build/BUILD/caTools/caTools.Rcheck' * using R version 3.6.1 (2019-07-05) * using platform: riscv64-redhat-linux-gnu (64-bit) * using session charset: ASCII * checking for file 'caTools/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'caTools' version '1.17.1' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'caTools' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Title field: should not end in a period. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... NOTE Found the following apparent S3 methods exported but not registered: predict.LogitBoost See section 'Registering S3 methods' in the 'Writing R Extensions' manual. * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE colAUC: no visible global function definition for 'plot' colAUC: no visible global function definition for 'title' colAUC: no visible global function definition for 'abline' colAUC: no visible global function definition for 'legend' colAUC: no visible global function definition for 'lines' read.ENVI: no visible global function definition for 'read.table' read.gif: no visible global function definition for 'download.file' read.gif: no visible global function definition for 'rgb' runmad: no visible global function definition for 'runmed' runmad: no visible binding for global variable 'mad' runquantile: no visible binding for global variable 'quantile' runsd: no visible binding for global variable 'sd' sample.split: no visible global function definition for 'runif' write.gif: no visible global function definition for 'gray' write.gif: no visible global function definition for 'colorRampPalette' write.gif: no visible global function definition for 'col2rgb' Undefined global functions or variables: abline col2rgb colorRampPalette download.file gray legend lines mad plot quantile read.table rgb runif runmed sd title Consider adding importFrom("grDevices", "col2rgb", "colorRampPalette", "gray", "rgb") importFrom("graphics", "abline", "legend", "lines", "plot", "title") importFrom("stats", "mad", "quantile", "runif", "runmed", "sd") importFrom("utils", "download.file", "read.table") to your NAMESPACE file. * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Packages unavailable to check Rd xrefs: 'fields', 'spatstat', 'R2HTML', 'pixmap', 'gplots', 'RColorBrewer', 'epitools', 'XML', 'exactRankTests', 'coin', 'ROCR', 'Epi', 'verification', 'Hmisc', 'gtools', 'magic', 'zoo' * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking examples ... OK * checking PDF version of manual ... OK BUILDSTDERR: * BUILDSTDERR: See BUILDSTDERR: '/builddir/build/BUILD/caTools/caTools.Rcheck/00check.log' BUILDSTDERR: for details. + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 DONE Status: 4 NOTEs Processing files: R-caTools-1.17.1-12.fc31.riscv64 Provides: R(caTools) = 1.17.1 R-caTools = 1.17.1-12.fc31 R-caTools(riscv-64) = 1.17.1-12.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(bitops) R-core >= 2.2.0 ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) rtld(GNU_HASH) Suggests: R(MASS) R(rpart) Processing files: R-caTools-debugsource-1.17.1-12.fc31.riscv64 Provides: R-caTools-debugsource = 1.17.1-12.fc31 R-caTools-debugsource(riscv-64) = 1.17.1-12.fc31 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-caTools-debuginfo-1.17.1-12.fc31.riscv64 Provides: R-caTools-debuginfo = 1.17.1-12.fc31 R-caTools-debuginfo(riscv-64) = 1.17.1-12.fc31 debuginfo(build-id) = 8c5efadc39d87b636b915b09a6c88047be327967 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-caTools-debugsource(riscv-64) = 1.17.1-12.fc31 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64 Wrote: /builddir/build/RPMS/R-caTools-debugsource-1.17.1-12.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/R-caTools-debuginfo-1.17.1-12.fc31.riscv64.rpm Wrote: /builddir/build/RPMS/R-caTools-1.17.1-12.fc31.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.9XUn2l + umask 022 + cd /builddir/build/BUILD + cd caTools + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-caTools-1.17.1-12.fc31.riscv64 + RPM_EC=0 BUILDSTDERR: ++ jobs -p + exit 0 Child return code was: 0