listDatabases {KEGGREST} | R Documentation |
Lists the KEGG databases which may be searched. In most cases, you can also use a KEGG organism name or T number (genome identifier) as a database name.
listDatabases()
A character vector of database names.
Dan Tenenbaum
https://www.kegg.jp/kegg/docs/keggapi.html
listDatabases()
res <- keggList("organism") ## list all organisms
nrow(res)
head(res)
res <- keggList("hsa") ## list all human genes
length(res)
head(res)
## keggList("T01001") ## list all human genes
res <- keggList("genome") ## list all genome identifiers
length(res)
head(res)