Mock Version: 1.4.21 Mock Version: 1.4.21 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-BufferedMatrix.spec'], chrootPath='/var/lib/mock/f33-build-292436-54867/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/R-BufferedMatrix.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1595808000 Wrote: /builddir/build/SRPMS/R-BufferedMatrix-1.52.0-2.fc33.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-BufferedMatrix.spec'], chrootPath='/var/lib/mock/f33-build-292436-54867/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False) Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/R-BufferedMatrix.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False Building target platforms: riscv64 Building for target riscv64 setting SOURCE_DATE_EPOCH=1595808000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.onC63h + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf BufferedMatrix + /usr/bin/mkdir -p BufferedMatrix + cd BufferedMatrix + /usr/bin/gzip -dc /builddir/build/SOURCES/BufferedMatrix_1.52.0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.N8kPNl + umask 022 + cd /builddir/build/BUILD + cd BufferedMatrix + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.Cst48k + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64 ++ dirname /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64 + cd BufferedMatrix + rm -rf /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64i + sed -i -e 's/\r$//' BufferedMatrix/inst/doc/BufferedMatrix.Rnw + mkdir -p /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64/usr/lib64/R/library BufferedMatrix * installing *source* package 'BufferedMatrix' ... ** using staged installation ** libs gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c RBufferedMatrix.c -o RBufferedMatrix.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c doubleBufferedMatrix.c -o doubleBufferedMatrix.o doubleBufferedMatrix.c: In function 'dbm_ReadOnlyMode': doubleBufferedMatrix.c:1580:7: warning: suggest parentheses around operand of '!' or change '&' to '&&' or '!' to '~' [-Wparentheses] 1580 | if (!(Matrix->readonly) & setting){ | ^~~~~~~~~~~~~~~~~~~ At top level: doubleBufferedMatrix.c:3327:12: warning: 'sort_double' defined but not used [-Wunused-function] 3327 | static int sort_double(const double *a1,const double *a2){ | ^~~~~~~~~~~ gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c doubleBufferedMatrix_C_tests.c -o doubleBufferedMatrix_C_tests.o gcc -I"/usr/include/R" -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -fasynchronous-unwind-tables -fstack-clash-protection -c init_package.c -o init_package.o gcc -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o BufferedMatrix.so RBufferedMatrix.o doubleBufferedMatrix.o doubleBufferedMatrix_C_tests.o init_package.o -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64/usr/lib64/R/library/00LOCK-BufferedMatrix/00new/BufferedMatrix/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for 'rowMeans' in package 'BufferedMatrix' Creating a new generic function for 'rowSums' in package 'BufferedMatrix' Creating a new generic function for 'colMeans' in package 'BufferedMatrix' Creating a new generic function for 'colSums' in package 'BufferedMatrix' Creating a generic function for 'ncol' from package 'base' in package 'BufferedMatrix' Creating a generic function for 'nrow' from package 'base' in package 'BufferedMatrix' ** help *** installing help indices converting help for package 'BufferedMatrix' finding HTML links ... done BufferedMatrix-class html as.BufferedMatrix html createBufferedMatrix html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BufferedMatrix) + test -d BufferedMatrix/src + cd BufferedMatrix/src + rm -f RBufferedMatrix.o doubleBufferedMatrix.o doubleBufferedMatrix_C_tests.o init_package.o BufferedMatrix.so + rm -rf /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64/usr/lib64/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh -j4 --strict-build-id -m -i --build-id-seed 1.52.0-2.fc33 --unique-debug-suffix -1.52.0-2.fc33.riscv64 --unique-debug-src-base R-BufferedMatrix-1.52.0-2.fc33.riscv64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/BufferedMatrix explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64/usr/lib64/R/library/BufferedMatrix/libs/BufferedMatrix.so extracting debug info from /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64/usr/lib64/R/library/BufferedMatrix/libs/BufferedMatrix.so original debug info size: 260kB, size after compression: 256kB /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 289 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.0y5Iij + umask 022 + cd /builddir/build/BUILD + cd BufferedMatrix + /usr/bin/R CMD check BufferedMatrix * using log directory '/builddir/build/BUILD/BufferedMatrix/BufferedMatrix.Rcheck' * using R version 3.6.3 (2020-02-29) * using platform: riscv64-redhat-linux-gnu (64-bit) * using session charset: ASCII * checking for file 'BufferedMatrix/DESCRIPTION' ... OK * this is package 'BufferedMatrix' version '1.52.0' * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.10/bioc/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.10/bioc/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.10/data/annotation/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.10/data/annotation/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.10/data/experiment/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.10/data/experiment/src/contrib/PACKAGES' OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'BufferedMatrix' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE prepare_Rd: createBufferedMatrix.Rd:26: Dropping empty section \keyword prepare_Rd: createBufferedMatrix.Rd:17-18: Dropping empty section \details prepare_Rd: createBufferedMatrix.Rd:15-16: Dropping empty section \value prepare_Rd: createBufferedMatrix.Rd:19-20: Dropping empty section \references prepare_Rd: createBufferedMatrix.Rd:21-22: Dropping empty section \seealso prepare_Rd: createBufferedMatrix.Rd:23-24: Dropping empty section \examples * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compiled code ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... NONE * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'Rcodetesting.R' Running 'c_code_level_tests.R' Running 'objectTesting.R' Running 'rawCalltesting.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... 'BufferedMatrix.Rnw'... OK OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See '/builddir/build/BUILD/BufferedMatrix/BufferedMatrix.Rcheck/00check.log' for details. + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-BufferedMatrix-1.52.0-2.fc33.riscv64 Provides: R(BufferedMatrix) = 1.52.0 R-BufferedMatrix = 1.52.0-2.fc33 R-BufferedMatrix(riscv-64) = 1.52.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 3.6 R(methods) R-core >= 2.6.0 ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) rtld(GNU_HASH) Processing files: R-BufferedMatrix-devel-1.52.0-2.fc33.riscv64 Provides: R-BufferedMatrix-devel = 1.52.0-2.fc33 R-BufferedMatrix-devel(riscv-64) = 1.52.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-BufferedMatrix-debugsource-1.52.0-2.fc33.riscv64 Provides: R-BufferedMatrix-debugsource = 1.52.0-2.fc33 R-BufferedMatrix-debugsource(riscv-64) = 1.52.0-2.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-BufferedMatrix-debuginfo-1.52.0-2.fc33.riscv64 Provides: R-BufferedMatrix-debuginfo = 1.52.0-2.fc33 R-BufferedMatrix-debuginfo(riscv-64) = 1.52.0-2.fc33 debuginfo(build-id) = e0774bac43c2bb4bfd126997d6d938cea322a14c Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-BufferedMatrix-debugsource(riscv-64) = 1.52.0-2.fc33 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64 Wrote: /builddir/build/RPMS/R-BufferedMatrix-devel-1.52.0-2.fc33.riscv64.rpm Wrote: /builddir/build/RPMS/R-BufferedMatrix-1.52.0-2.fc33.riscv64.rpm Wrote: /builddir/build/RPMS/R-BufferedMatrix-debuginfo-1.52.0-2.fc33.riscv64.rpm Wrote: /builddir/build/RPMS/R-BufferedMatrix-debugsource-1.52.0-2.fc33.riscv64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.M92wHi + umask 022 + cd /builddir/build/BUILD + cd BufferedMatrix + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-BufferedMatrix-1.52.0-2.fc33.riscv64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0